IVF0024079 (gene) Melon (IVF77) v1

Overview


Name	IVF0024079
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Non-specific lipid-transfer protein
Location	chr08: 24828109 .. 24829273 (-)
RNA-Seq Expression	IVF0024079
Synteny	IVF0024079

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATCTACAAACTCCTCCAAATTTCTATTTACTAATTTTCGTAAACGCATCATGGCAAGTAACTTAATCACGATTCTAAAGTTGGGTTTAACTGTAACACTTCTCTACGCCGTGATAGGTGGAGGGGTGACGACAGAGGCAACCGTAACGTGCAACCAAGTGGTCTCCAATTTGAGTCCATGTATTTCGTACGTGACGGGCGGAGGATCCCCGTCATTTAACTGTTGCAGTGGTGTGAGACAGTTGAACAAGGCAGCTCAGACAACGCCGGATAGACAGGACGTATGTCGGTGCTTGAAATCATTGATCAATGGCGTTACGTATAATGGCCAAAATGTTGCCAATGCTGCTGCTCTTCCGACCAAGTGTGGCGTCAATCTTCCCTACACTATCAACCCCAATGCCGACTGTAGCACGTAATATATTTCTCTCTCTAAATTTTTATGTTACATGATCTTTTGATTTGAGTCTAAGTGTTGAGTACAGTTTTCATTTTCTTCATATTTTCAACTATGCATCTTCAGTTTAATTTTCACTTTTACACTTAGTTCTGAGTTTTTTTAAAAAAACTTATTTGGTTACATAATTTTCAAAAATTTACATTTACACTCTTTAATATTAATGCTTACTTTATTATTATGTTTAACCTTTACATAACAAAACAATTTAAAATGAAGAGTTCACACTGATCTGAATTATAAATACTTTAATATCTTTAAATTAGTTGTGATAAAACATCAAACATAAATGCCTAAAATGAAAACTAAAATGTATAAAATTTTTAAACCTAAGAATGAAATAAAAACTTTAGTTCGAAAGTAAAAACGGTAAGATGAATAATTTGAAAATTGGTCGAAAATCTCAAAACTCAACCAAGTTTTTTTTTCCTTATTTTGTACGTATTTGTTAACTTTATTTAGTTTAAGAAAGTTCTAATTAATTTACCTGGGAATTATTATTACTTTGCAGCATTAAAATGTGAGGAAAATCAAGCAGCTACACTGCAAGACGATGTCGTATCGATGGAAGAATAAATGGAGAGAGCATTTTGCTATGAACAAATTATGAACTTTGTTTTGAAATATTGTCTACTTGAAAACCCTTTGTACTTGGGTTCATGGTTTGAATTTAAATTTATATAAATATGATAGCGTTTACTTAAAA

mRNA sequence

CTCATCTACAAACTCCTCCAAATTTCTATTTACTAATTTTCGTAAACGCATCATGGCAAGTAACTTAATCACGATTCTAAAGTTGGGTTTAACTGTAACACTTCTCTACGCCGTGATAGGTGGAGGGGTGACGACAGAGGCAACCGTAACGTGCAACCAAGTGGTCTCCAATTTGAGTCCATGTATTTCGTACGTGACGGGCGGAGGATCCCCGTCATTTAACTGTTGCAGTGGTGTGAGACAGTTGAACAAGGCAGCTCAGACAACGCCGGATAGACAGGACGTATGTCGGTGCTTGAAATCATTGATCAATGGCGTTACGTATAATGGCCAAAATGTTGCCAATGCTGCTGCTCTTCCGACCAAGTGTGGCGTCAATCTTCCCTACACTATCAACCCCAATGCCGACTGTAGCACCATTAAAATGTGAGGAAAATCAAGCAGCTACACTGCAAGACGATGTCGTATCGATGGAAGAATAAATGGAGAGAGCATTTTGCTATGAACAAATTATGAACTTTGTTTTGAAATATTGTCTACTTGAAAACCCTTTGTACTTGGGTTCATGGTTTGAATTTAAATTTATATAAATATGATAGCGTTTACTTAAAA

Coding sequence (CDS)

ATGGCAAGTAACTTAATCACGATTCTAAAGTTGGGTTTAACTGTAACACTTCTCTACGCCGTGATAGGTGGAGGGGTGACGACAGAGGCAACCGTAACGTGCAACCAAGTGGTCTCCAATTTGAGTCCATGTATTTCGTACGTGACGGGCGGAGGATCCCCGTCATTTAACTGTTGCAGTGGTGTGAGACAGTTGAACAAGGCAGCTCAGACAACGCCGGATAGACAGGACGTATGTCGGTGCTTGAAATCATTGATCAATGGCGTTACGTATAATGGCCAAAATGTTGCCAATGCTGCTGCTCTTCCGACCAAGTGTGGCGTCAATCTTCCCTACACTATCAACCCCAATGCCGACTGTAGCACCATTAAAATGTGA

Protein sequence

MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIKM

Homology

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BLAST of IVF0024079 vs. ExPASy Swiss-Prot
Match: Q43019 (Non-specific lipid-transfer protein 3 OS=Prunus dulcis OX=3755 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.1e-28
Identity = 59/117 (50.43%), Postives = 78/117 (66.67%), Query Frame = 0


Query: 8   ILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNK 67
           +LKL   V ++  +  GG    A V+C QVV+NL+PCI+YV  GG+ + +CC+GVR L  
Sbjct: 7   LLKLVCLVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPSCCTGVRSLYS 66

Query: 68  AAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
            AQTT DRQ +C CLK  +NG+ Y   N   AA LP KCGVN+PY I+P+ DC +IK
Sbjct: 67  LAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123

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BLAST of IVF0024079 vs. ExPASy Swiss-Prot
Match: Q7XJ39 (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica OX=39947 GN=LTP2-A PE=3 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-25
Identity = 53/103 (51.46%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 21  VIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTTPDRQDVCR 80
           ++ G  TT A ++C QV S +SPC+SY  GG  PS  CCSGVR LN AA TT DR+  C 
Sbjct: 17  LLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTTADRRTACN 76

Query: 81  CLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTI 124
           CLK++   +  +G N  NAA++P+KCGV++PYTI+P+ DCS++
Sbjct: 77  CLKNVAGSI--SGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117

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BLAST of IVF0024079 vs. ExPASy Swiss-Prot
Match: A2ZAT0 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP2-A PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-25
Identity = 53/103 (51.46%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 21  VIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTTPDRQDVCR 80
           ++ G  TT A ++C QV S +SPC+SY  GG  PS  CCSGVR LN AA TT DR+  C 
Sbjct: 17  LLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTTADRRTACN 76

Query: 81  CLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTI 124
           CLK++   +  +G N  NAA++P+KCGV++PYTI+P+ DCS++
Sbjct: 77  CLKNVAGSI--SGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117

[Close]

BLAST of IVF0024079 vs. ExPASy Swiss-Prot
Match: Q2QYL2 (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.5e-25
Identity = 55/114 (48.25%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 10  KLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAA 69
           +L L   +   ++ G  TT A ++C QV S +SPC+SY  GG  PS  CCSGVR LN AA
Sbjct: 5   QLVLVALVAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAA 64

Query: 70  QTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTI 124
            TT DR+  C CLK++   +  +G N  NAA++P+KCGV++PYTI+P+ DCS++
Sbjct: 65  TTTADRRTACNCLKNVAGSI--SGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116

[Close]

BLAST of IVF0024079 vs. ExPASy Swiss-Prot
Match: Q43194 (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor OX=4558 GN=LTP2 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-24
Identity = 58/119 (48.74%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 9   LKLGLTVTLL---YAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGS-PSFNCCSGVRQ 68
           +KL + + ++    AV+    T+EA VTC QV S + PC+SY  G GS PS  CCSGVR 
Sbjct: 5   MKLAVAIAVVAAAAAVVLAATTSEAAVTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRS 64

Query: 69  LNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTI 124
           LN AA+TT DR+  C CLK+   G+   G NV  AA++P+KCGV++PYTI+ + DCS +
Sbjct: 65  LNSAARTTADRRAACNCLKNAARGI--RGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121

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BLAST of IVF0024079 vs. ExPASy TrEMBL
Match: A0A1S3CIS8 (Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103501462 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.8e-63
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60
           MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS
Sbjct: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60

Query: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120
           GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC
Sbjct: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120

Query: 121 STIKM 126
           STIKM
Sbjct: 121 STIKM 125

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BLAST of IVF0024079 vs. ExPASy TrEMBL
Match: A0A5D3CEZ6 (Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00580 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 9.9e-62
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60
           MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS
Sbjct: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60

Query: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120
           GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC
Sbjct: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120

Query: 121 ST 123
           ST
Sbjct: 121 ST 122

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BLAST of IVF0024079 vs. ExPASy TrEMBL
Match: A0A0A0KY77 (Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_4G333620 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.2e-53
Identity = 105/125 (84.00%), Postives = 115/125 (92.00%), Query Frame = 0


Query: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60
           MASNLITILKLGLTVT LYAVIGGGVTTEA V+CNQV++NL PC+SYVTGGG PS NCCS
Sbjct: 1   MASNLITILKLGLTVTFLYAVIGGGVTTEAVVSCNQVITNLRPCVSYVTGGGYPSSNCCS 60

Query: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120
           GV+QL+ AA+TTPDRQ VCRCLKSL+NGV YNGQNVANAAALPTKCGV LPY+INPN DC
Sbjct: 61  GVKQLSTAARTTPDRQAVCRCLKSLVNGVKYNGQNVANAAALPTKCGVTLPYSINPNVDC 120

Query: 121 STIKM 126
           +TIKM
Sbjct: 121 NTIKM 125

[Close]

BLAST of IVF0024079 vs. ExPASy TrEMBL
Match: A0A6J1EBM4 (Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC111432531 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.7e-35
Identity = 77/124 (62.10%), Postives = 94/124 (75.81%), Query Frame = 0


Query: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60
           MAS+ +  +K+GL V L+  +I GG  +EA VTCNQVVS+L  C+SYVTGGG+PS  CCS
Sbjct: 1   MASSGMINVKMGLVVALVCGIIMGGRVSEAAVTCNQVVSDLGACVSYVTGGGTPSATCCS 60

Query: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120
           GV+ LNK A T  DRQ VC CL+SL+ GV+YN Q +ANAAALP KCGV LPY I+P  DC
Sbjct: 61  GVQDLNKLASTAADRQAVCGCLESLVKGVSYNAQTLANAAALPAKCGVKLPYKIDPRTDC 120

Query: 121 STIK 125
           STI+
Sbjct: 121 STIR 124

[Close]

BLAST of IVF0024079 vs. ExPASy TrEMBL
Match: A0A6J1HTX7 (Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111466126 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 7.9e-35
Identity = 76/124 (61.29%), Postives = 94/124 (75.81%), Query Frame = 0


Query: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60
           MAS+ +  +K+GL V L+  +I GG  +EA VTCNQVVS+L  C+SYVTGGG+PS  CCS
Sbjct: 1   MASSGMINVKMGLVVALVCGIIMGGRVSEAAVTCNQVVSDLGACVSYVTGGGAPSATCCS 60

Query: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120
           GV+ LNK A T  DRQ VC CL+SL+ GV+YN Q +ANAAALP +CGV LPY I+P  DC
Sbjct: 61  GVQDLNKLASTAADRQAVCGCLESLVKGVSYNAQTLANAAALPARCGVKLPYKIDPRIDC 120

Query: 121 STIK 125
           STI+
Sbjct: 121 STIR 124

[Close]

BLAST of IVF0024079 vs. NCBI nr
Match: XP_008463259.1 (PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis melo])

HSP 1 Score: 251 bits (641), Expect = 4.66e-84
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60
           MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS
Sbjct: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60

Query: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120
           GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC
Sbjct: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120

Query: 121 STIKM 125
           STIKM
Sbjct: 121 STIKM 125

[Close]

BLAST of IVF0024079 vs. NCBI nr
Match: KAA0025399.1 (non-specific lipid-transfer protein 1-like [Cucumis melo var. makuwa] >TYK09774.1 non-specific lipid-transfer protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 246 bits (627), Expect = 5.77e-82
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60
           MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS
Sbjct: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60

Query: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120
           GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC
Sbjct: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120

Query: 121 ST 122
           ST
Sbjct: 121 ST 122

[Close]

BLAST of IVF0024079 vs. NCBI nr
Match: XP_004151695.1 (non-specific lipid-transfer protein 1 [Cucumis sativus] >KGN54448.1 hypothetical protein Csa_012253 [Cucumis sativus])

HSP 1 Score: 218 bits (554), Expect = 8.67e-71
Identity = 105/125 (84.00%), Postives = 115/125 (92.00%), Query Frame = 0


Query: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60
           MASNLITILKLGLTVT LYAVIGGGVTTEA V+CNQV++NL PC+SYVTGGG PS NCCS
Sbjct: 1   MASNLITILKLGLTVTFLYAVIGGGVTTEAVVSCNQVITNLRPCVSYVTGGGYPSSNCCS 60

Query: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120
           GV+QL+ AA+TTPDRQ VCRCLKSL+NGV YNGQNVANAAALPTKCGV LPY+INPN DC
Sbjct: 61  GVKQLSTAARTTPDRQAVCRCLKSLVNGVKYNGQNVANAAALPTKCGVTLPYSINPNVDC 120

Query: 121 STIKM 125
           +TIKM
Sbjct: 121 NTIKM 125

[Close]

BLAST of IVF0024079 vs. NCBI nr
Match: XP_038883886.1 (non-specific lipid-transfer protein 1-like [Benincasa hispida])

HSP 1 Score: 190 bits (482), Expect = 8.20e-60
Identity = 92/125 (73.60%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60
           MASNLI  +KLGL +T L  VIGG V TEA VTCNQV+SNL+PC+ +VTGGG+PS NCCS
Sbjct: 1   MASNLIGNVKLGLIITFLCTVIGGRVMTEAVVTCNQVISNLNPCVQFVTGGGAPSGNCCS 60

Query: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120
           GVRQL   AQTTPDRQ VCRCLKS++NGV Y+G+NVANAAALP+KCGV LPY I+PN DC
Sbjct: 61  GVRQLFALAQTTPDRQAVCRCLKSVVNGVRYSGKNVANAAALPSKCGVQLPYAIDPNVDC 120

Query: 121 STIKM 125
           +TIKM
Sbjct: 121 NTIKM 125

[Close]

BLAST of IVF0024079 vs. NCBI nr
Match: XP_023518220.1 (non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159 bits (403), Expect = 8.59e-48
Identity = 78/124 (62.90%), Postives = 95/124 (76.61%), Query Frame = 0


Query: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60
           MASN +  +K+GL V L+  +I GG  +EA VTCNQVVS+L  C+SYVTGGG+PS  CCS
Sbjct: 1   MASNGMINVKMGLVVALVCGIIMGGRVSEAAVTCNQVVSDLGACVSYVTGGGTPSATCCS 60

Query: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120
           GV+ LNK A T  DRQ VC CL+SL+ GV+YN Q +ANAAALP+KCGV LPY I+P  DC
Sbjct: 61  GVQDLNKLASTAADRQAVCGCLESLVKGVSYNAQTLANAAALPSKCGVKLPYKIDPRIDC 120

Query: 121 STIK 124
           STI+
Sbjct: 121 STIR 124

[Close]

BLAST of IVF0024079 vs. TAIR 10
Match: AT5G01870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 110.5 bits (275), Expect = 9.6e-25
Identity = 50/108 (46.30%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 17  LLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTTPDRQ 76
           LL ++   G  +EA ++CN V +NL PC+ YV  GG+  ++CC+G+R L+K A +  D+Q
Sbjct: 11  LLASIFAWG--SEAAISCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATSASDKQ 70

Query: 77  DVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
            VCRC+KS++  V+Y+   +  AAALP KCGV LPY I+P+ +C++IK
Sbjct: 71  GVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116

[Close]

BLAST of IVF0024079 vs. TAIR 10
Match: AT3G08770.1 (lipid transfer protein 6 )

HSP 1 Score: 109.4 bits (272), Expect = 2.1e-24
Identity = 54/112 (48.21%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 13  LTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTT 72
           L V L+ A+  G    EA V+CN V+++L PC+SYVT GG     CC+G+  L   AQT+
Sbjct: 6   LAVCLVLALHCG----EAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTS 65

Query: 73  PDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
            DRQ VCRC+KS I G+T + + + NA  LP+KCGV+LPY  +P+ DC +I+
Sbjct: 66  VDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113

[Close]

BLAST of IVF0024079 vs. TAIR 10
Match: AT3G08770.2 (lipid transfer protein 6 )

HSP 1 Score: 107.5 bits (267), Expect = 8.1e-24
Identity = 53/110 (48.18%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 13  LTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTT 72
           L V L+ A+  G    EA V+CN V+++L PC+SYVT GG     CC+G+  L   AQT+
Sbjct: 6   LAVCLVLALHCG----EAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTS 65

Query: 73  PDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCST 123
            DRQ VCRC+KS I G+T + + + NA  LP+KCGV+LPY  +P+ DC +
Sbjct: 66  VDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDS 111

[Close]

BLAST of IVF0024079 vs. TAIR 10
Match: AT5G59310.1 (lipid transfer protein 4 )

HSP 1 Score: 102.1 bits (253), Expect = 3.4e-22
Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = 0


Query: 27  TTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTTPDRQDVCRCLKSLI 86
           + +A +TC  V S+LSPC+ Y++ GG     CC+GV++LN  AQTTPDRQ  CRCL+S  
Sbjct: 20  SVDAAITCGTVASSLSPCLGYLSKGGVVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSAA 79

Query: 87  NGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
            GV     N + A+ LP KCGV++PY I+ + +C+TIK
Sbjct: 80  KGV-----NPSLASGLPGKCGVSIPYPISTSTNCATIK 112

[Close]

BLAST of IVF0024079 vs. TAIR 10
Match: AT2G38540.1 (lipid transfer protein 1 )

HSP 1 Score: 96.3 bits (238), Expect = 1.9e-20
Identity = 47/117 (40.17%), Postives = 70/117 (59.83%), Query Frame = 0


Query: 8   ILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNK 67
           ++KL   + L   ++ G +T+ A ++C  V SNL+ CI YV  GG     CCSGV+ LN 
Sbjct: 4   VMKLA-CLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLNS 63

Query: 68  AAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
            A+TTPDRQ  C C++     +  +G N   AA +P  CGVN+PY I+ + +C T++
Sbjct: 64  IAKTTPDRQQACNCIQGAARALG-SGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118

The following BLAST results are available for this feature:

BLAST of IVF0024079 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43019	3.1e-28	50.43	Non-specific lipid-transfer protein 3 OS=Prunus dulcis OX=3755 PE=2 SV=1	[more]
Q7XJ39	1.1e-25	51.46	Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
A2ZAT0	1.1e-25	51.46	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q2QYL2	2.5e-25	48.25	Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q43194	2.1e-24	48.74	Non-specific lipid-transfer protein 2 OS=Sorghum bicolor OX=4558 GN=LTP2 PE=3 SV...	[more]

BLAST of IVF0024079 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CIS8	1.8e-63	100.00	Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103501462 PE=3...	[more]
A0A5D3CEZ6	9.9e-62	100.00	Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A0A0KY77	2.2e-53	84.00	Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_4G333620 P...	[more]
A0A6J1EBM4	2.7e-35	62.10	Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC11143253...	[more]
A0A6J1HTX7	7.9e-35	61.29	Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111466126 ...	[more]

BLAST of IVF0024079 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463259.1	4.66e-84	100.00	PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis melo]	[more]
KAA0025399.1	5.77e-82	100.00	non-specific lipid-transfer protein 1-like [Cucumis melo var. makuwa] >TYK09774....	[more]
XP_004151695.1	8.67e-71	84.00	non-specific lipid-transfer protein 1 [Cucumis sativus] >KGN54448.1 hypothetical...	[more]
XP_038883886.1	8.20e-60	73.60	non-specific lipid-transfer protein 1-like [Benincasa hispida]	[more]
XP_023518220.1	8.59e-48	62.90	non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0024079 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01870.1	9.6e-25	46.30	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G08770.1	2.1e-24	48.21	lipid transfer protein 6	[more]
AT3G08770.2	8.1e-24	48.18	lipid transfer protein 6	[more]
AT5G59310.1	3.4e-22	48.98	lipid transfer protein 4	[more]
AT2G38540.1	1.9e-20	40.17	lipid transfer protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 93..110 score: 47.18 coord: 74..89 score: 44.04 coord: 111..122 score: 46.03 coord: 53..67 score: 46.36 coord: 33..49 score: 49.77
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 8..122
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 34..120 e-value: 1.1E-13 score: 61.5
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 34..112 e-value: 7.0E-10 score: 39.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 32..124 e-value: 8.0E-31 score: 108.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 32..123
None	No IPR available	PANTHER	PTHR33076:SF50	NON-SPECIFIC LIPID-TRANSFER PROTEIN 10-RELATED	coord: 8..122
None	No IPR available	CDD	cd01960	nsLTP1	coord: 32..121 e-value: 8.10027E-37 score: 118.992

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024079.2	IVF0024079.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding