IVF0024028 (gene) Melon (IVF77) v1

Overview
NameIVF0024028
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr08: 6614584 .. 6614957 (+)
RNA-Seq ExpressionIVF0024028
SyntenyIVF0024028
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGACAGAGAGAGAAAGGGATAAAGGGGTTCGTATGTGTGAGTGAAAAGAAAGGTGGGCCCAGAAGTGTGGTGGTGGCGCTGGGCAGTGCCCACCACCGGAGTTGGTGGCGAAAGGGAAGAAGAGAGAAGGGGGAAGAAAATTAAAACGAAAATCGAAAAACCCACAACAAAAAACAGTGTGTTTGTTTTGTTTTTAATTAAACAAAGGGAATCAAATGAAAAGAAACAATTGATGGGTTTGGTTCGGGTTTGGTGATAGTTACTTTATTTGTGGTAGTGGGTTGAGTCCAGTGCGAAAGATGGGATTGAACATTCCAGATTCCACAGTTGCGTTGAGTGAGAGAAGACGAAACAGAGAGAGAATCTGA

mRNA sequence

ATGGACAGACAGAGAGAGAAAGGGATAAAGGGGTTCGTATGTGTGAGTGAAAAGAAAGGTGGGCCCAGAAGTGTGGTGGTGGCGCTGGGCAGTGCCCACCACCGGAGTTGTTACTTTATTTGTGGTAGTGGGTTGAGTCCAGTGCGAAAGATGGGATTGAACATTCCAGATTCCACAGTTGCGTTGAGTGAGAGAAGACGAAACAGAGAGAGAATCTGA

Coding sequence (CDS)

ATGGACAGACAGAGAGAGAAAGGGATAAAGGGGTTCGTATGTGTGAGTGAAAAGAAAGGTGGGCCCAGAAGTGTGGTGGTGGCGCTGGGCAGTGCCCACCACCGGAGTTGTTACTTTATTTGTGGTAGTGGGTTGAGTCCAGTGCGAAAGATGGGATTGAACATTCCAGATTCCACAGTTGCGTTGAGTGAGAGAAGACGAAACAGAGAGAGAATCTGA

Protein sequence

MDRQREKGIKGFVCVSEKKGGPRSVVVALGSAHHRSCYFICGSGLSPVRKMGLNIPDSTVALSERRRNRERI
Homology
[Close]
BLAST of IVF0024028 vs. ExPASy TrEMBL
Match: A0A0A0KKW5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486690 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.6e-24
Identity = 63/81 (77.78%), Postives = 63/81 (77.78%), Query Frame = 0 

Query: 1  MDRQREKGIKGFVCVSEKKGGPRSVVVALGSAHHRS-----------------CYFICGS 60
          MDRQREKGIKGFVCVSEKKGGPRSVVVALGSAHHRS                  YFICGS
Sbjct: 1  MDRQREKGIKGFVCVSEKKGGPRSVVVALGSAHHRSWESKEEKQLVVWFGFGDSYFICGS 60

Query: 61 GLSPVRKMGLNIPDSTVALSE 65
          GLSPVRKMGLNIPDSTVALSE
Sbjct: 61 GLSPVRKMGLNIPDSTVALSE 81

[Close]
BLAST of IVF0024028 vs. NCBI nr
Match: KGN48396.1 (hypothetical protein Csa_004314 [Cucumis sativus])

HSP 1 Score: 119 bits (298), Expect = 2.77e-33
Identity = 63/81 (77.78%), Postives = 63/81 (77.78%), Query Frame = 0 

Query: 1  MDRQREKGIKGFVCVSEKKGGPRSVVVALGSAHHRS-----------------CYFICGS 60
          MDRQREKGIKGFVCVSEKKGGPRSVVVALGSAHHRS                  YFICGS
Sbjct: 1  MDRQREKGIKGFVCVSEKKGGPRSVVVALGSAHHRSWESKEEKQLVVWFGFGDSYFICGS 60

Query: 61 GLSPVRKMGLNIPDSTVALSE 64
          GLSPVRKMGLNIPDSTVALSE
Sbjct: 61 GLSPVRKMGLNIPDSTVALSE 81

The following BLAST results are available for this feature:
BLAST of IVF0024028 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0024028 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKW53.6e-2477.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486690 PE=4 SV=1[more]
BLAST of IVF0024028 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48396.12.77e-3377.78hypothetical protein Csa_004314 [Cucumis sativus][more]
BLAST of IVF0024028 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0024028.1IVF0024028.1mRNA