IVF0024005 (gene) Melon (IVF77) v1

Overview


Name	IVF0024005
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Replication protein A subunit
Location	chr05: 26591991 .. 26595726 (-)
RNA-Seq Expression	IVF0024005
Synteny	IVF0024005

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGTGCATCTCACGCCCAATGCAATCTCCGCAATTGTCGCTGGCGACGTTAATTCCAAGCCCCTGGTGCAGGTTCTGGATATCAAGCTGATCGGTAACGCGCAGGAGAGGTACAGCCTCTTGATCTCCGACGCTGTTTCTGCTGAGCAGGCTATGCTCGCCACGCAGCTTAATGATATTGTTAAGACTGGACGAGTCAAGAAAGGATCCGTTATCCAGTTGATCGATTATGTCTGCAGTCCCATCAAGAACCGCAAGTTCGTTCTCTCCCTCGTAATTCATTGATTACTTTTCTTCATCGCAGTGTGCTAATGAAACCTAGTTGTATGTGGCGTTATTGTTAATTGTAATTCGCTTACTGGCCTTCTCGGACAAAGTGATGCATGTTTAGTAAAATTAGGTGTGCGCTTGAAGCTTTAAGATGAACTGTTCTGCGATTCATAGCTGAAACGGAGAAATGGTTATTTTGCTTTACATTGAAATCTCCTATAGAAAACAGTTTGTATGCTTGTTTAGTTGTTTGAAATGATAGGTGTATGTATGAATTACCGTCTAACGTTGATACTATTGTATTAGATTTTGATCATCGTTTGATTGTCAATGAAAGAAATTATTAATTAGTTTCGTGCCGACAGATTTCTGTTCTCTCCTATTTTTGTTCAAATCTGTGTATACGAACAGATCGTGGGAGAAATGTTCTGTTATTAGTTTCTATGCTTGTTTGAAATGTTAAATGCATGCGTGAATTACCGCCCTAGGGTTTATTAGCAATCATTGATTGGTTTCTGTACGATCGAAATGTTAGGTTTGGACACAAGTGGTTTAATCTTGATAGATTTCTGTTTTCTCCTTTTATTCTTGTTAAATGATGTGTTATGAACACATCATGCTAAAAGAGGTTGTGTGAGTTAGTTCTTGCATTAATTACCGTCTAAAGTCGACAGACTTTATTAAATTGTAATCATAGATCTATTTGAACTTTCGGTCTGTACACAAGTGGTAATTCTTTGCATGTGAACACATCATGGTGTAAGAGATTCTATCAGTTTACATACCCGTTTGACAGTTCGTAAATTGATACAGTTAATTTAATTTTAGTTGTTGATTAACTGTCCATTTGAATTGGTAGGTTTGGACAGAGGTGCCAATAGATTCTTTCTGCTCCTTTTGTCATCGTGAAAATTTTGTGCATATGAACACATCATGGGAAAAGGGGGTCCGATTGTCAATTTATATGTTTGTTTGAGATAATGAAATGCTAGGTGCATGCATGATTTAATGTTTAAGATTGATTCAGTTTACATTAATCTTAATTAGCCACTGATTGATTGTCCAATTTCATTGTTAGGTCTTACACAACTGATTTTTGGTCTGTACACAAGTGGTTTAGTACTGATTGATTGTCGTCCTCTGCTTTTATTCTTTTTAAATTATGTGTACTAGAACACATCTCGGGGACAAAAGGGTCCAATTGTTAATTTATATGCTTGTCTGAAATGTTTGGTTCATGCATGAATTACTGCCTATGGTATATACGATTATTGAACTTAATCATTGATCGAGTGTCCATTTCAGGTGTTATAATTTTACACAAGTGGTTTAGCGCTTTAGATTCCTGTTCTCTCTTTTTATCTTGTTGAAGTTTGTGTATCTGAACACATCATGGGAAAAAGGTCTTATTGTCAATTTAGATGCTTGTTTTGAAATGCTCGGTGCATGCATGAATTATTGTCCAAGGTTATAGAATTTCTAACAGCGCTAGTTCTCCATTTCCATTGTTTGGTTTGGGTTTAGTGCTAATCTCTCATATTCTTATTAAAATTTGTGTCTGTGTACCAACCATGACATGAGATAGAAAGGTCTTATTGGTTAACTTTTAGCTGTACAATTAGTGTTTGCTTTGTGGATATGTTCTCATGTTCGTGTTAATTATGGTATCTTACTTCTCATTCTGTGCTGACTGTAGCTTTGTAAACTAGACGATTTATAGATTCTTCACAGTAGGATTGATGTTATAACTGAGCAGGACAAATTATATCCTTTGAGTTAAGTCCACTTCTGACTTTCATTGCTATGTCCTGGAGCCAATGGTGATTTCTCTACTATCTGCCTATCATGCAGGATTATTGTTGTACTCTGCCTGGAAACTATTATATTGGATTGTGAGATAATTGGGAATCCAAAATCATCAGCTCAATCAGAGACTTTTGCACAAAAGGCAACACCGTCTGGAAATTTAGAGCAACCTGCCAAGGTTGGTAATGGTCATTTGAGTGCCAGAAATCCAGTTCATAATGTGCAAAGCTTCCAAGCTACAGTTCAACCTCCATATCAGCCACCTCCAAATTATAAAAATCATGGTGCAATCATTAAGAACGATGCACCAGCTCGTATAATTCCCATAGCTGCATTGAATCCTTATCAGGGACGATGGGCTATAAAGGCAAGAGTTACTGCAAAGGGTGATCTCCGTCGCTATAACAATGCCAAAGGAGATGGAAAAGTTTTCTCTTTTGACCTCCTCGATTCTGATGGAGGAGAGATACGTGTGACCTGTTTTAATGCGGTTGTGGATCGTTTCTATGAGGTCATAGAAGTTGGTAAAGTCTACTTGATTTCTAAAGGTAGCCTAAAACCTGCACGGAAGGATTTCAATCATCTAAAGAATGAATGGGAGGTTTTCTTGGAGGCATCTTCCACTGTGGAACCGTGCCCAGATGAAGATGATACCATACCAAGACAACAGTTTTCTTTTAAACCTATCAGTGAAATCGAGAATGCCGAAACCAACTCTATTCTGGATGTTATTGGAATTGTAACATCTATCAATCCATCAATTCCTGTTCTGAGGAAAAATGGTATGGAAACTCAAAGAAGAGTTGTGTATTTGAAGGATGCGTCTGGCAGGAGTGTTGAGCTAACAATGTGGGGGGATTTTTGCAACAAGGAAGGCCAAAAATTGCAAGAAATAATTTACTCAGGCCTTTCTCCCGTTTTAGCTGTGAAATCCGGGAAGGTAAGTGATTTCACTGGGAAATCCATTGGGACAATTTCTTCTACTCAGCTTTTCATAAATCCCGATCTTCCTGAGGCTCACATCTTGAGGGAGTGGTACGATGGTGGGGGAAAGAATACTACTTCTCTATCTATTTCTAAAGAAATTGTACCAGGATCTGCCAAGAATGATATTCGGAAGACTGTGTCTCAGATTAAAGATGAAGGACTAGGCAGAGCCGACAAGCCAGATTGGATAACGGTGAAAGCAACAATATCATTTATCAAAACAGATTCTTTCTGCTACACAGCGTGCCCGTTAATGATTGGAGATCGACAATGCAACAAGAAGGTGACTAGATCAGGAAACTCGAAGTGGGTGTGTGACAGGTGCAATCAAGAATTTGAGGATTGCGACTACAGGTATCTTCTGCAAGCTCAAATCCAAGACCATACTGGATTGACATGGGTGACGGCCTTCCAGGAAACTGGTGAAGAGATTCTGGGTGTTTCAGCCAAGGAATTGTATGTGTTGAAGTATGAAAACCAGGATGATGTCAAGTTTGGTGAAATCATCAGAAGTACAATCTTCGGTCAATTTCTGTTTAGGCTCAAAATTAAGGAGGAGGTGTATGGGGATGAACAAAGAGTGAAAAATACTGTAGTCAAGGCAGATAGGGTAAACTATTCTTCAGAAAGCAAATATATGTTGGATTTGCTTTCCAAATTTTCGAGGTAA

mRNA sequence

ATGCCGGTGCATCTCACGCCCAATGCAATCTCCGCAATTGTCGCTGGCGACGTTAATTCCAAGCCCCTGGTGCAGGTTCTGGATATCAAGCTGATCGGTAACGCGCAGGAGAGGTACAGCCTCTTGATCTCCGACGCTGTTTCTGCTGAGCAGGCTATGCTCGCCACGCAGCTTAATGATATTGTTAAGACTGGACGAGTCAAGAAAGGATCCGTTATCCAGTTGATCGATTATGTCTGCAGTCCCATCAAGAACCGCAAGATTATTGTTGTACTCTGCCTGGAAACTATTATATTGGATTGTGAGATAATTGGGAATCCAAAATCATCAGCTCAATCAGAGACTTTTGCACAAAAGGCAACACCGTCTGGAAATTTAGAGCAACCTGCCAAGGTTGGTAATGGTCATTTGAGTGCCAGAAATCCAGTTCATAATGTGCAAAGCTTCCAAGCTACAGTTCAACCTCCATATCAGCCACCTCCAAATTATAAAAATCATGGTGCAATCATTAAGAACGATGCACCAGCTCGTATAATTCCCATAGCTGCATTGAATCCTTATCAGGGACGATGGGCTATAAAGGCAAGAGTTACTGCAAAGGGTGATCTCCGTCGCTATAACAATGCCAAAGGAGATGGAAAAGTTTTCTCTTTTGACCTCCTCGATTCTGATGGAGGAGAGATACGTGTGACCTGTTTTAATGCGGTTGTGGATCGTTTCTATGAGGTCATAGAAGTTGGTAAAGTCTACTTGATTTCTAAAGGTAGCCTAAAACCTGCACGGAAGGATTTCAATCATCTAAAGAATGAATGGGAGGTTTTCTTGGAGGCATCTTCCACTGTGGAACCGTGCCCAGATGAAGATGATACCATACCAAGACAACAGTTTTCTTTTAAACCTATCAGTGAAATCGAGAATGCCGAAACCAACTCTATTCTGGATGTTATTGGAATTGTAACATCTATCAATCCATCAATTCCTGTTCTGAGGAAAAATGGTATGGAAACTCAAAGAAGAGTTGTGTATTTGAAGGATGCGTCTGGCAGGAGTGTTGAGCTAACAATGTGGGGGGATTTTTGCAACAAGGAAGGCCAAAAATTGCAAGAAATAATTTACTCAGGCCTTTCTCCCGTTTTAGCTGTGAAATCCGGGAAGGTAAGTGATTTCACTGGGAAATCCATTGGGACAATTTCTTCTACTCAGCTTTTCATAAATCCCGATCTTCCTGAGGCTCACATCTTGAGGGAGTGGTACGATGGTGGGGGAAAGAATACTACTTCTCTATCTATTTCTAAAGAAATTGTACCAGGATCTGCCAAGAATGATATTCGGAAGACTGTGTCTCAGATTAAAGATGAAGGACTAGGCAGAGCCGACAAGCCAGATTGGATAACGGTGAAAGCAACAATATCATTTATCAAAACAGATTCTTTCTGCTACACAGCGTGCCCGTTAATGATTGGAGATCGACAATGCAACAAGAAGGTGACTAGATCAGGAAACTCGAAGTGGGTGTGTGACAGGTGCAATCAAGAATTTGAGGATTGCGACTACAGGTATCTTCTGCAAGCTCAAATCCAAGACCATACTGGATTGACATGGGTGACGGCCTTCCAGGAAACTGGTGAAGAGATTCTGGGTGTTTCAGCCAAGGAATTGTATGTGTTGAAGTATGAAAACCAGGATGATGTCAAGTTTGGTGAAATCATCAGAAGTACAATCTTCGGTCAATTTCTGTTTAGGCTCAAAATTAAGGAGGAGGTGTATGGGGATGAACAAAGAGTGAAAAATACTGTAGTCAAGGCAGATAGGGTAAACTATTCTTCAGAAAGCAAATATATGTTGGATTTGCTTTCCAAATTTTCGAGGTAA

Coding sequence (CDS)

ATGCCGGTGCATCTCACGCCCAATGCAATCTCCGCAATTGTCGCTGGCGACGTTAATTCCAAGCCCCTGGTGCAGGTTCTGGATATCAAGCTGATCGGTAACGCGCAGGAGAGGTACAGCCTCTTGATCTCCGACGCTGTTTCTGCTGAGCAGGCTATGCTCGCCACGCAGCTTAATGATATTGTTAAGACTGGACGAGTCAAGAAAGGATCCGTTATCCAGTTGATCGATTATGTCTGCAGTCCCATCAAGAACCGCAAGATTATTGTTGTACTCTGCCTGGAAACTATTATATTGGATTGTGAGATAATTGGGAATCCAAAATCATCAGCTCAATCAGAGACTTTTGCACAAAAGGCAACACCGTCTGGAAATTTAGAGCAACCTGCCAAGGTTGGTAATGGTCATTTGAGTGCCAGAAATCCAGTTCATAATGTGCAAAGCTTCCAAGCTACAGTTCAACCTCCATATCAGCCACCTCCAAATTATAAAAATCATGGTGCAATCATTAAGAACGATGCACCAGCTCGTATAATTCCCATAGCTGCATTGAATCCTTATCAGGGACGATGGGCTATAAAGGCAAGAGTTACTGCAAAGGGTGATCTCCGTCGCTATAACAATGCCAAAGGAGATGGAAAAGTTTTCTCTTTTGACCTCCTCGATTCTGATGGAGGAGAGATACGTGTGACCTGTTTTAATGCGGTTGTGGATCGTTTCTATGAGGTCATAGAAGTTGGTAAAGTCTACTTGATTTCTAAAGGTAGCCTAAAACCTGCACGGAAGGATTTCAATCATCTAAAGAATGAATGGGAGGTTTTCTTGGAGGCATCTTCCACTGTGGAACCGTGCCCAGATGAAGATGATACCATACCAAGACAACAGTTTTCTTTTAAACCTATCAGTGAAATCGAGAATGCCGAAACCAACTCTATTCTGGATGTTATTGGAATTGTAACATCTATCAATCCATCAATTCCTGTTCTGAGGAAAAATGGTATGGAAACTCAAAGAAGAGTTGTGTATTTGAAGGATGCGTCTGGCAGGAGTGTTGAGCTAACAATGTGGGGGGATTTTTGCAACAAGGAAGGCCAAAAATTGCAAGAAATAATTTACTCAGGCCTTTCTCCCGTTTTAGCTGTGAAATCCGGGAAGGTAAGTGATTTCACTGGGAAATCCATTGGGACAATTTCTTCTACTCAGCTTTTCATAAATCCCGATCTTCCTGAGGCTCACATCTTGAGGGAGTGGTACGATGGTGGGGGAAAGAATACTACTTCTCTATCTATTTCTAAAGAAATTGTACCAGGATCTGCCAAGAATGATATTCGGAAGACTGTGTCTCAGATTAAAGATGAAGGACTAGGCAGAGCCGACAAGCCAGATTGGATAACGGTGAAAGCAACAATATCATTTATCAAAACAGATTCTTTCTGCTACACAGCGTGCCCGTTAATGATTGGAGATCGACAATGCAACAAGAAGGTGACTAGATCAGGAAACTCGAAGTGGGTGTGTGACAGGTGCAATCAAGAATTTGAGGATTGCGACTACAGGTATCTTCTGCAAGCTCAAATCCAAGACCATACTGGATTGACATGGGTGACGGCCTTCCAGGAAACTGGTGAAGAGATTCTGGGTGTTTCAGCCAAGGAATTGTATGTGTTGAAGTATGAAAACCAGGATGATGTCAAGTTTGGTGAAATCATCAGAAGTACAATCTTCGGTCAATTTCTGTTTAGGCTCAAAATTAAGGAGGAGGTGTATGGGGATGAACAAAGAGTGAAAAATACTGTAGTCAAGGCAGATAGGGTAAACTATTCTTCAGAAAGCAAATATATGTTGGATTTGCTTTCCAAATTTTCGAGGTAA

Protein sequence

MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKATPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKPISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDGGGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCYTACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVVKADRVNYSSESKYMLDLLSKFSR

Homology

[Close]

BLAST of IVF0024005 vs. ExPASy Swiss-Prot
Match: Q9SKI4 (Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA1A PE=1 SV=1)

HSP 1 Score: 908.7 bits (2347), Expect = 3.7e-263
Identity = 438/638 (68.65%), Postives = 538/638 (84.33%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIG----NAQERYSLLISDAVSAEQAMLAT 60
           MPV LTPNAI+AI  GDVN KPL+QVL+IK+IG     +QERY  LISD VSA+ AM+A 
Sbjct: 1   MPVSLTPNAITAIHDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAV 60

Query: 61  QLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETF 120
           QLND VK+G+ +KGS++QLIDY+CS +K RK+IVVL +ETI+   E IGNP    +++T 
Sbjct: 61  QLNDRVKSGQFEKGSIVQLIDYICSDVKGRKLIVVLNMETIVQQSETIGNPTIFGETDTE 120

Query: 121 AQKA-TPSGNLEQPAKVGNGH--------------LSARNPVHNVQSFQATVQPPYQPPP 180
           AQK  + +GN+  P +V                  ++ +N  +N  SF+ +VQP YQPP 
Sbjct: 121 AQKTFSGTGNIPPPNRVVFNEPMVQHSVNRAPPRGVNIQNQANNTPSFRPSVQPSYQPPA 180

Query: 181 NYKNHGAIIKNDAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLL 240
           +Y+NHG I+KN+APAR+IPIAALNPYQGRWAIKARVTAKGD+RRYNNAKGDGKVFSFDLL
Sbjct: 181 SYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLL 240

Query: 241 DSDGGEIRVTCFNAVVDRFYEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTV 300
           D DGGEIRVTCFNA+VDRFY+V EVGKVYLISKGSLKPA+K+FNHLKNEWE+FLE++STV
Sbjct: 241 DYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTV 300

Query: 301 EPCPDEDDTIPRQQFSFKPISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVV 360
           E CPDED +IP+QQFSF+PIS+IENAE N+ILDVIG+VTS+NPS+P+LRKNGMET RR++
Sbjct: 301 ELCPDEDGSIPKQQFSFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRIL 360

Query: 361 YLKDASGRSVELTMWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQ 420
            LKD SG++VE+T+WG+FCN++G++L+E++ S   PVLA+K+GKVSDF+GKS+GTISSTQ
Sbjct: 361 NLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQ 420

Query: 421 LFINPDLPEAHILREWYDGGGKNTTSLSISKEIVPGS-AKNDIRKTVSQIKDEGLGRADK 480
           LFINPD PEAH LR W+D GGK+T S SIS++ +PG  ++N+IRK VSQIK+EGLGR+DK
Sbjct: 421 LFINPDFPEAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDK 480

Query: 481 PDWITVKATISFIKTDSFCYTACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRY 540
           PDWITVKATISFIKTDSFCYTACPLMIGD+QCNKKVTRSG ++W+CDRCNQE ++CDYRY
Sbjct: 481 PDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRY 540

Query: 541 LLQAQIQDHTGLTWVTAFQETGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLF 600
           LLQ QIQDHTGLTW+TAFQETGEEI+G  AK+LY +KYE + + +F EI+R  +F Q++ 
Sbjct: 541 LLQVQIQDHTGLTWITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYML 600

Query: 601 RLKIKEEVYGDEQRVKNTVVKADRVNYSSESKYMLDLL 619
           +LKIKEE YGDEQRVK TVVK D+VNY+SESKYMLDLL
Sbjct: 601 KLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLDLL 638

[Close]

BLAST of IVF0024005 vs. ExPASy Swiss-Prot
Match: Q6YZ49 (Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1A PE=1 SV=1)

HSP 1 Score: 788.9 bits (2036), Expect = 4.3e-227
Identity = 379/650 (58.31%), Postives = 500/650 (76.92%), Query Frame = 0


Query: 5   LTPNAISAIVAGDVNSKPLVQVLDIKLIG------NAQERYSLLISDAVSAEQAMLATQL 64
           LTPN ++A +AGD N KP++Q+++++ +          ER+  ++SD  +A  A+ A QL
Sbjct: 6   LTPNGVAAALAGDTNLKPVLQIVELRGVQVNGAGVTRGERFRAVVSDGTAASSALFAAQL 65

Query: 65  NDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQ 124
           +D  ++G +++GS++QL +YV + +  R+IIV+L LE ++ +CEIIGNP + +++ +   
Sbjct: 66  SDHARSGALRRGSIVQLSEYVINEVGPRRIIVILNLEVLVSECEIIGNPTALSETGSPIP 125

Query: 125 KAT------------------------PSGN--LEQPAKVGNGHLSARNPVHNVQSFQAT 184
             T                        PS N  L Q +  GN    A  P   V  FQ T
Sbjct: 126 NPTRVEQFNGAPQYGLMAGNSSNTTTKPSDNVPLFQNSMAGNSSNFATRPSDKVPVFQPT 185

Query: 185 VQPPYQPPPNYKNHGAIIKNDAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGD 244
           VQP Y+P PNYKNHGAI+KN+APARIIPI+ALNPYQGRWAIKARVTAKGD+RRY+NAKGD
Sbjct: 186 VQPSYRPAPNYKNHGAIMKNEAPARIIPISALNPYQGRWAIKARVTAKGDIRRYHNAKGD 245

Query: 245 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEVIEVGKVYLISKGSLKPARKDFNHLKNEWE 304
           GKVFSFDLLDSDGGEIRVTCFNA++DRFYEV+EVGKVY++S+G+L+PA+K++NHL NEWE
Sbjct: 246 GKVFSFDLLDSDGGEIRVTCFNALLDRFYEVVEVGKVYVVSRGNLRPAQKNYNHLNNEWE 305

Query: 305 VFLEASSTVEPCPDEDDTIPRQQFSFKPISEIENAETNSILDVIGIVTSINPSIPVLRKN 364
           + LE  STV+ CPDE+ +IP Q+F F+PI+EIE+A+ N+ILD+IG+VTS+NP   + RKN
Sbjct: 306 ILLENGSTVDLCPDENSSIPTQRFDFRPINEIEDAQNNAILDIIGVVTSVNPCTTIQRKN 365

Query: 365 GMETQRRVVYLKDASGRSVELTMWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGK 424
           GMETQ+R + LKD SGRSVE+TMWGDFCN+EG +LQ ++  G+ PVLAVK+GKVSDF+GK
Sbjct: 366 GMETQKRTMNLKDMSGRSVEVTMWGDFCNREGSQLQGMVERGIFPVLAVKAGKVSDFSGK 425

Query: 425 SIGTISSTQLFINPDLPEAHILREWYDGGGKNTTSLSISKEIVPGSAKNDIRKTVSQIKD 484
           S+GTISSTQLFINPD  EAH LR+W+D GG++ ++ SIS++I PG+++N+IRKTV+QIKD
Sbjct: 426 SVGTISSTQLFINPDSAEAHSLRQWFDSGGRDASTQSISRDITPGASRNEIRKTVAQIKD 485

Query: 485 EGLGRADKPDWITVKATISFIKTDSFCYTACPLMIGDRQCNKKVTRSGNSKWVCDRCNQE 544
           EGLG  DKPDWITVKAT+ F K +SF YTACP MIGDRQCNKKVT+S N  W CD+C++E
Sbjct: 486 EGLGMGDKPDWITVKATVIFFKNESFFYTACPNMIGDRQCNKKVTKSTNGNWTCDKCDRE 545

Query: 545 FEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSAKELYVLKYENQDDVKFGEIIRS 604
           FE+CDYRYLLQ QIQDH+G  WVTAFQE G+E+LG SA EL  LK   ++D +F + + +
Sbjct: 546 FEECDYRYLLQFQIQDHSGTAWVTAFQEAGQELLGCSATELNALK--EREDPRFADTMLN 605

Query: 605 TIFGQFLFRLKIKEEVYGDEQRVKNTVVKADRVNYSSESKYMLDLLSKFS 623
            +F ++L RLK+KEE YGDE++VKNT VK ++V+ S ESK++LDL+SK S
Sbjct: 606 CLFQEYLLRLKVKEESYGDERKVKNTAVKVEKVDPSGESKFLLDLISKSS 653

[Close]

BLAST of IVF0024005 vs. ExPASy Swiss-Prot
Match: Q9FHJ6 (Replication protein A 70 kDa DNA-binding subunit C OS=Arabidopsis thaliana OX=3702 GN=RPA1C PE=3 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 6.2e-186
Identity = 343/741 (46.29%), Postives = 462/741 (62.35%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSK----PLVQVLDIKLIGN-------AQERYSLLISDAVSA 60
           M V LT   +  ++ G+V S+    P++QV ++KLI +       +  RY  L+SD    
Sbjct: 1   MAVSLTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDL 60

Query: 61  EQAMLATQLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKS 120
              ML T LN +V  G ++ GSVI+L  Y+C+ I+ R+I+V++ LE I+  C IIGNPK 
Sbjct: 61  AAGMLNTSLNSLVNQGTIQLGSVIRLTHYICNLIQTRRIVVIMQLEVIVEKCNIIGNPKE 120

Query: 121 SAQSETFAQKA-------------------------TPSGNLEQPAKVGNGH-------- 180
              S    Q+                            S N  QP  V N          
Sbjct: 121 PGHSSINPQRGGVNTQSNGGSEQQQARRSDVNGGRYGVSANSPQPQVVHNSSDAGRYCVS 180

Query: 181 -------------------LSARNP----VHN---------------------------- 240
                              +SA +P    VHN                            
Sbjct: 181 ANSPQPQVVHSSSDAGRYGVSANSPQRQVVHNSPDAGRYGQPQVSQRYGTGSGYPETSPS 240

Query: 241 ------------------------VQSFQATVQPPYQP--PPNYKNHGAIIKNDAPARII 300
                                     ++   VQ  YQP  PP Y N G + +N+AP RI 
Sbjct: 241 TRPYVSSNAGYGGSRQDQPRAPTATTAYSRPVQSAYQPQQPPMYVNRGPVARNEAPPRIN 300

Query: 301 PIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 360
           PIAALNPYQGRW IK RVT+K DLRR+NN +G+GK+FSFDLLD+DGGEIRVTCFN  VD+
Sbjct: 301 PIAALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFNDAVDQ 360

Query: 361 FYEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFK 420
           F++ I VG VYLIS+G+LKPA+K+FNHL N++E+ L+++ST++PC D D TIPR  F F+
Sbjct: 361 FFDKIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPCED-DGTIPRYHFHFR 420

Query: 421 PISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDF 480
            I +IEN E NS  DVIGIV+SI+P++ ++RKN  E Q+R + LKD SGRSVE+TMWG+F
Sbjct: 421 NIGDIENMENNSTTDVIGIVSSISPTVAIMRKNLTEVQKRSLQLKDMSGRSVEVTMWGNF 480

Query: 481 CNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYD 540
           CN EGQKLQ +  SG+ PVLA+K+G++ +F GK + TI ++Q FI PD PEA  LR+WY+
Sbjct: 481 CNAEGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEARELRQWYE 540

Query: 541 GGGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFC 600
             G+N    SIS+E   G  + ++RK ++QIKDE LG ++KPDWITV ATISF+K ++FC
Sbjct: 541 REGRNAHFTSISREF-SGVGRQEVRKVIAQIKDEKLGTSEKPDWITVCATISFMKVENFC 600

Query: 601 YTACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQ 621
           YTACP+M GDR C+KKVT +G+  W C++C++  ++CDYRY+LQ Q+QDHT LTW TAFQ
Sbjct: 601 YTACPIMNGDRPCSKKVTNNGDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTWATAFQ 660

[Close]

BLAST of IVF0024005 vs. ExPASy Swiss-Prot
Match: F4JSG3 (Replication protein A 70 kDa DNA-binding subunit E OS=Arabidopsis thaliana OX=3702 GN=RPA1E PE=2 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 2.7e-181
Identity = 325/672 (48.36%), Postives = 452/672 (67.26%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSK----PLVQVLDIKLIGNAQ----ERYSLLISDAVSAEQA 60
           M V LT  AI  I+ G+V ++    P++QV D+K I   Q    ER+ +++SD     Q 
Sbjct: 1   MEVSLTAGAIGKIMNGEVTTEADMIPVLQVTDLKQIMAQQDPTRERFRMVLSDGTYLHQG 60

Query: 61  MLATQLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQ 120
           ML T LN++VK G ++ GS+++L  +V   IK R+I++V  LE +    +IIG+P    +
Sbjct: 61  MLGTDLNNLVKEGTLQPGSIVRLTRFVGDVIKGRRIVIVPQLEVLKQISDIIGHPVPGGK 120

Query: 121 SETFAQKATPSG-NLEQPAKVGNGHLSARN---------------------PVHNVQSFQ 180
                Q+   SG       + G+G     N                     P     S +
Sbjct: 121 HND--QRGADSGIKFNTTEQQGSGIRQVNNIEPGRSNAAISPQVGGTGSSVPASTTPSTR 180

Query: 181 ATVQP----------------------PYQPPPNYKNHGAIIKNDAPARIIPIAALNPYQ 240
           A   P                      P  PPP Y N G + +N+AP +IIP+ AL+PY 
Sbjct: 181 AYSNPSSGNGVTRQDYARDPPTSYPHQPQPPPPMYANRGPVARNEAPPKIIPVNALSPYS 240

Query: 241 GRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEVIEVGK 300
           GRW IKARVT K  L++Y+N +G+GKVF+FDLLD+DGGEIRVTCFNAV D+FY+ I VG 
Sbjct: 241 GRWTIKARVTNKAALKQYSNPRGEGKVFNFDLLDADGGEIRVTCFNAVADQFYDQIVVGN 300

Query: 301 VYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKPISEIENAE 360
           +YLIS+GSL+PA+K+FNHL+N++E+ L+ +ST++ C +ED  IPR QF F+ I +IE+ E
Sbjct: 301 LYLISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPRHQFHFRTIGDIESME 360

Query: 361 TNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFCNKEGQKLQ 420
            N I+DVIGIV+SI+P++ + RKNG  T +R + LKD SGRSVE+TMWGDFCN EGQ+LQ
Sbjct: 361 NNCIVDVIGIVSSISPTVTITRKNGTATPKRSLQLKDMSGRSVEVTMWGDFCNAEGQRLQ 420

Query: 421 EIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDGGGKNTTSL 480
            +  SG+ PVLAVK+G++S+F GK++ TI S+QLFI+PD  EA  L+ W++  GK+   +
Sbjct: 421 SLCDSGVFPVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWFEREGKSVPCI 480

Query: 481 SISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCYTACPLMIG 540
           S+S+E   GS K D+RKT+SQIKDE LG ++KPDWITV ATI ++K D+FCYTACP+M G
Sbjct: 481 SLSREF-SGSGKVDVRKTISQIKDEKLGTSEKPDWITVSATILYLKFDNFCYTACPIMNG 540

Query: 541 DRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGV 600
           DR C+KKVT +G+  W C++C++  ++CDYRY+LQ QIQDHT LT VTAFQE GEEI+G+
Sbjct: 541 DRPCSKKVTDNGDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCVTAFQEAGEEIMGI 600

Query: 601 SAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVVKADRVNYS 621
           SAK+LY +K E++D+ KF +IIR   F ++ F+LK+KEE + DEQRVK TVVK D++NYS
Sbjct: 601 SAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNFKLKVKEETFSDEQRVKATVVKVDKLNYS 660

[Close]

BLAST of IVF0024005 vs. ExPASy Swiss-Prot
Match: Q65XV7 (Replication protein A 70 kDa DNA-binding subunit C OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1C PE=1 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 1.0e-156
Identity = 308/747 (41.23%), Postives = 433/747 (57.97%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVA---GDVNSKPLVQVLDIKLIGNAQ--------ERYSLLISDAVSA 60
           M   LTP A+ AI     G    +P++QV+D++ +            ER+ +++SD V+ 
Sbjct: 1   MEPQLTPGAVQAIAEHPDGTGTIQPVLQVVDVRPVTTKNAPPTPKPAERFRMMLSDGVNT 60

Query: 61  EQAMLATQLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKS 120
           +Q+MLAT LN +VK   ++ G+V+QL D++C+ I+ ++II+V+ L+ +  DC +IGNPK 
Sbjct: 61  QQSMLATALNPLVKDATLRPGTVVQLTDFMCNTIQGKRIIIVVKLDVLQNDCIVIGNPKH 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 YEPKSLTKEQDPNLQASVAQTNNGTYSGGASMLGPSVAPRAEQAASNSSYGGPYNSAQGM 180

Query: 181 -------------------------SAQSETFAQKATPSGNLE-------QPAKVGN--- 240
                                    SAQ+ T A    P+  L        QP    N   
Sbjct: 181 LGSSIGRTVEPGPANVSAVGSYGAISAQNTTNANMMQPTSQLNIMNANTMQPTSQLNTMN 240

Query: 241 -------GHLSARNPVHNVQSFQATV----------------QPPY-QPPPNYKNHGAII 300
                    LS+ NP  N Q F A                  +P Y QPPP Y N G   
Sbjct: 241 ANTMQPTSQLSSLNPNQN-QRFAAPASGGVFGPPGNAYGQPSRPSYQQPPPVYMNRGPAS 300

Query: 301 KNDAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRV 360
           +ND+  RIIPI ALNPYQ +W IKARVTAK D+R ++NA+  G VFSFDLLD+ GGEIR 
Sbjct: 301 RNDSATRIIPITALNPYQPKWTIKARVTAKSDIRHWSNARSSGTVFSFDLLDAQGGEIRA 360

Query: 361 TCFNAVVDRFYEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEAS-STVEPCPDEDD 420
            C+    D+F+  IEVG+VYLIS+GSLKPA+K +N L +++E+ L+   STVE C D+D+
Sbjct: 361 QCWKESADKFFGQIEVGRVYLISRGSLKPAQKKYNTLNHDYEITLDIGLSTVEVCSDDDN 420

Query: 421 TIPRQQFSFKPISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGR 480
           +IPR Q++F+ ISE+EN    +I+D++G+VTS++PS  ++RK G ET++R + LKD SGR
Sbjct: 421 SIPRLQYNFRQISELENMANETIVDLLGVVTSVSPSATIMRKIGTETRKRSIQLKDLSGR 480

Query: 481 SVELTMWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLP 540
           S+E+T+WG+FC+ EGQ+LQ    SG +P++A K  +V DF GKS+ TI STQL INPD P
Sbjct: 481 SIEVTLWGNFCDAEGQQLQLQCDSGSNPIIAFKGARVGDFNGKSVSTIGSTQLIINPDFP 540

Query: 541 EAHILREWYDGGGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKAT 600
           E   LR+WY   GK    +S+S+E++    + D RKT++QIKDE LGR +KPDWITVKA 
Sbjct: 541 EVERLRQWYMTEGKTAPCISLSREML-NMGRTDARKTIAQIKDENLGRLEKPDWITVKAA 600

Query: 601 ISFIKTDSFCYTACP-LMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQD 616
           IS + T+SFCY ACP L+   RQCNKK   +G+  W CDRC++ F++ +YRY+L+ QIQD
Sbjct: 601 ISHVTTESFCYPACPKLLPVGRQCNKKAINNGDGMWHCDRCDESFQNPEYRYMLRFQIQD 660

[Close]

BLAST of IVF0024005 vs. ExPASy TrEMBL
Match: A0A1S3CAT4 (Replication protein A subunit OS=Cucumis melo OX=3656 GN=LOC103498706 PE=3 SV=1)

HSP 1 Score: 1241.9 bits (3212), Expect = 0.0e+00
Identity = 622/623 (99.84%), Postives = 622/623 (99.84%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA 120
           IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA
Sbjct: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA 120

Query: 121 TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPARIIP 180
           TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPA IIP
Sbjct: 121 TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPACIIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP 300
           YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP 300

Query: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360
           ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420
           NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG
Sbjct: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420

Query: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV 600
           TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV 600

Query: 601 KADRVNYSSESKYMLDLLSKFSR 624
           KADRVNYSSESKYMLDLLSKFSR
Sbjct: 601 KADRVNYSSESKYMLDLLSKFSR 623

[Close]

BLAST of IVF0024005 vs. ExPASy TrEMBL
Match: A0A0A0LKL9 (Replication protein A subunit OS=Cucumis sativus OX=3659 GN=Csa_2G000250 PE=3 SV=1)

HSP 1 Score: 1225.3 bits (3169), Expect = 0.0e+00
Identity = 614/623 (98.56%), Postives = 617/623 (99.04%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA 120
           +VKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSE FAQKA
Sbjct: 61  VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120

Query: 121 TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPARIIP 180
           TPS NLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKN+APARIIP
Sbjct: 121 TPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP 300
           YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVE CPDEDDTIPRQQFSFKP
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVELCPDEDDTIPRQQFSFKP 300

Query: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360
           ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420
           NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG
Sbjct: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420

Query: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV 600
           TGEEILGVSAKELY+LKYE QDDVKFGEIIRS IF QFLFRLKIKEEVYGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQRVKNTVV 600

Query: 601 KADRVNYSSESKYMLDLLSKFSR 624
           KADRVNYSSESKYMLDLLSKFSR
Sbjct: 601 KADRVNYSSESKYMLDLLSKFSR 623

[Close]

BLAST of IVF0024005 vs. ExPASy TrEMBL
Match: A0A6J1G4P2 (Replication protein A subunit OS=Cucurbita moschata OX=3662 GN=LOC111450710 PE=3 SV=1)

HSP 1 Score: 1163.3 bits (3008), Expect = 0.0e+00
Identity = 582/620 (93.87%), Postives = 601/620 (96.94%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGN QERYSLLISDAVS EQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNTQERYSLLISDAVSTEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA 120
           I+KTGRVKKGSVIQLIDYVCSPIK+RK+IVVL LETIILD EIIGNPKSSAQSE FAQKA
Sbjct: 61  IIKTGRVKKGSVIQLIDYVCSPIKSRKVIVVLSLETIILDSEIIGNPKSSAQSENFAQKA 120

Query: 121 TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPARIIP 180
            PSGNLEQPAKVGN  +SARNPV+NVQSFQATVQPPYQPPPNYKNHGAIIKN+APAR+IP
Sbjct: 121 MPSGNLEQPAKVGNRLVSARNPVNNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARVIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP 300
           YEVIEVGKVYLISKGSLKPARKDFNHL NEWEVFLEASSTVE CPDEDDTIPRQQFSF+P
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLNNEWEVFLEASSTVEHCPDEDDTIPRQQFSFRP 300

Query: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360
           ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRV+ LKDASGRSVELT+WGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVLNLKDASGRSVELTLWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420
           NKEGQ LQEII SGLSPVLAVKSGKVSDFTGKSIGTISSTQLF+NPDL EA ILR+WYDG
Sbjct: 361 NKEGQNLQEIINSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFVNPDLSEALILRDWYDG 420

Query: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEI+ GSAKN+IRK+VSQIKDEGLGR+DKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIMSGSAKNEIRKSVSQIKDEGLGRSDKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKW+CDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV 600
           TGEEILGVSAKELY+LKYE QDDVKFGEIIRS IF QFLFRLKIKEE+YGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYILKYEQQDDVKFGEIIRSKIFDQFLFRLKIKEEMYGDEQRVKNTVV 600

Query: 601 KADRVNYSSESKYMLDLLSK 621
           KADRVNYSSESKYMLDLLSK
Sbjct: 601 KADRVNYSSESKYMLDLLSK 620

[Close]

BLAST of IVF0024005 vs. ExPASy TrEMBL
Match: A0A6J1KGE2 (Replication protein A subunit OS=Cucurbita maxima OX=3661 GN=LOC111493656 PE=3 SV=1)

HSP 1 Score: 1155.2 bits (2987), Expect = 0.0e+00
Identity = 578/620 (93.23%), Postives = 599/620 (96.61%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGN QERYSLLISDAVS EQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNTQERYSLLISDAVSTEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA 120
           I+KTGRVKKGSVIQLIDYVCSPIK+RK+IVVL LETIILD EIIGNPKSSAQSE  AQKA
Sbjct: 61  IIKTGRVKKGSVIQLIDYVCSPIKSRKVIVVLSLETIILDSEIIGNPKSSAQSENVAQKA 120

Query: 121 TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPARIIP 180
            PSGNLEQPAKVGN  +SARNPV+NVQSFQATVQPPYQPPPNYKNHGAIIKN+APAR+IP
Sbjct: 121 MPSGNLEQPAKVGNRLVSARNPVNNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARVIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP 300
           YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVE CPDEDDTIPRQQFSF+P
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEHCPDEDDTIPRQQFSFRP 300

Query: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360
           ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRV+ LKDASGRSVELT+WGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVLNLKDASGRSVELTLWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420
           NKEGQ LQE+I SGLSPVLAVKSGKVSDFTGKSIGTISSTQLF+NPDL EA ILR+WYDG
Sbjct: 361 NKEGQNLQEMINSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFVNPDLSEALILRDWYDG 420

Query: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEI+ GSAKN+IRK+VSQIKDEGLGR+DKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIMSGSAKNEIRKSVSQIKDEGLGRSDKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKW+CDRCNQ FEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQVFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV 600
           TGEEILGVSAKELY+LKYE QDDVKFGEIIR  IF QFLFRLKIKEE+YGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYMLKYEQQDDVKFGEIIRGKIFDQFLFRLKIKEEMYGDEQRVKNTVV 600

Query: 601 KADRVNYSSESKYMLDLLSK 621
           KAD+VNYSSESKYMLDLLSK
Sbjct: 601 KADKVNYSSESKYMLDLLSK 620

[Close]

BLAST of IVF0024005 vs. ExPASy TrEMBL
Match: A0A6J1DMC5 (Replication protein A subunit OS=Momordica charantia OX=3673 GN=LOC111021895 PE=3 SV=1)

HSP 1 Score: 1140.6 bits (2949), Expect = 0.0e+00
Identity = 566/623 (90.85%), Postives = 596/623 (95.67%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIG  QERYSL ISDAVSAE AMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGKTQERYSLFISDAVSAEHAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA 120
           IVK GR+KKGSVIQLIDYVCSP++ RKIIVV+CLETIILDCEIIGNPKSSAQS+  AQKA
Sbjct: 61  IVKAGRIKKGSVIQLIDYVCSPVQGRKIIVVICLETIILDCEIIGNPKSSAQSDFSAQKA 120

Query: 121 TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPARIIP 180
           TPS NLEQ AKVGNGH+S +NPVHNVQSFQATVQPPYQPPPNYKNHGAIIKN+APARIIP
Sbjct: 121 TPSRNLEQSAKVGNGHVSDKNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNA+GDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP 300
           YEVIEVGKVYLISKGSLKPA+K+FNHLKNEWEVFLEASS+VE CPDEDDTIPRQQFSF+P
Sbjct: 241 YEVIEVGKVYLISKGSLKPAQKNFNHLKNEWEVFLEASSSVELCPDEDDTIPRQQFSFRP 300

Query: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360
           ISEIENAETNSILD+IGIVTSINPSIPVLRKNGMETQRRV+ LKDASGRSVELT+WGDFC
Sbjct: 301 ISEIENAETNSILDIIGIVTSINPSIPVLRKNGMETQRRVLNLKDASGRSVELTLWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420
           N+EGQKLQEII SGLSP+LAVKSGKVSDFTGKSIGTISSTQLFI+PDL E+ ILR+WYDG
Sbjct: 361 NREGQKLQEIINSGLSPILAVKSGKVSDFTGKSIGTISSTQLFIDPDLCESRILRDWYDG 420

Query: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTS+SISKEI+PG+AKN+IRKTVSQIKDEGLGR+DKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSVSISKEIMPGAAKNEIRKTVSQIKDEGLGRSDKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKV RSGNSKW+CDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVNRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV 600
           +GEEILGV AKELYVLKYE QDDVKFG IIRS IF QFLFRLKIKEE+YGDEQRVKNTVV
Sbjct: 541 SGEEILGVPAKELYVLKYEEQDDVKFGAIIRSKIFDQFLFRLKIKEEMYGDEQRVKNTVV 600

Query: 601 KADRVNYSSESKYMLDLLSKFSR 624
           KAD VNY  ESKYML+LL  FSR
Sbjct: 601 KADGVNYYLESKYMLNLLPDFSR 623

[Close]

BLAST of IVF0024005 vs. NCBI nr
Match: XP_008459663.1 (PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Cucumis melo])

HSP 1 Score: 1239 bits (3206), Expect = 0.0
Identity = 622/623 (99.84%), Postives = 622/623 (99.84%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA 120
           IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA
Sbjct: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA 120

Query: 121 TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPARIIP 180
           TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPA IIP
Sbjct: 121 TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPACIIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP 300
           YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP 300

Query: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360
           ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420
           NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG
Sbjct: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420

Query: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV 600
           TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV 600

Query: 601 KADRVNYSSESKYMLDLLSKFSR 623
           KADRVNYSSESKYMLDLLSKFSR
Sbjct: 601 KADRVNYSSESKYMLDLLSKFSR 623

[Close]

BLAST of IVF0024005 vs. NCBI nr
Match: XP_011648589.2 (replication protein A 70 kDa DNA-binding subunit A [Cucumis sativus])

HSP 1 Score: 1222 bits (3163), Expect = 0.0
Identity = 614/623 (98.56%), Postives = 617/623 (99.04%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA 120
           +VKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSE FAQKA
Sbjct: 61  VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120

Query: 121 TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPARIIP 180
           TPS NLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKN+APARIIP
Sbjct: 121 TPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP 300
           YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVE CPDEDDTIPRQQFSFKP
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVELCPDEDDTIPRQQFSFKP 300

Query: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360
           ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420
           NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG
Sbjct: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420

Query: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV 600
           TGEEILGVSAKELY+LKYE QDDVKFGEIIRS IF QFLFRLKIKEEVYGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQRVKNTVV 600

Query: 601 KADRVNYSSESKYMLDLLSKFSR 623
           KADRVNYSSESKYMLDLLSKFSR
Sbjct: 601 KADRVNYSSESKYMLDLLSKFSR 623

[Close]

BLAST of IVF0024005 vs. NCBI nr
Match: KGN60516.1 (hypothetical protein Csa_019336 [Cucumis sativus])

HSP 1 Score: 1222 bits (3163), Expect = 0.0
Identity = 614/623 (98.56%), Postives = 617/623 (99.04%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA 120
           +VKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSE FAQKA
Sbjct: 61  VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120

Query: 121 TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPARIIP 180
           TPS NLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKN+APARIIP
Sbjct: 121 TPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP 300
           YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVE CPDEDDTIPRQQFSFKP
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVELCPDEDDTIPRQQFSFKP 300

Query: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360
           ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420
           NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG
Sbjct: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420

Query: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV 600
           TGEEILGVSAKELY+LKYE QDDVKFGEIIRS IF QFLFRLKIKEEVYGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQRVKNTVV 600

Query: 601 KADRVNYSSESKYMLDLLSKFSR 623
           KADRVNYSSESKYMLDLLSKFSR
Sbjct: 601 KADRVNYSSESKYMLDLLSKFSR 623

[Close]

BLAST of IVF0024005 vs. NCBI nr
Match: XP_038890007.1 (replication protein A 70 kDa DNA-binding subunit A [Benincasa hispida] >XP_038890008.1 replication protein A 70 kDa DNA-binding subunit A [Benincasa hispida] >XP_038890009.1 replication protein A 70 kDa DNA-binding subunit A [Benincasa hispida])

HSP 1 Score: 1169 bits (3024), Expect = 0.0
Identity = 583/619 (94.18%), Postives = 603/619 (97.42%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGD+NSKPLVQVLDIKLIGNAQERYS+LISDAVSAEQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDINSKPLVQVLDIKLIGNAQERYSILISDAVSAEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA 120
           ++KTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKS AQSE FA KA
Sbjct: 61  VIKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSYAQSENFALKA 120

Query: 121 TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPARIIP 180
           TPS NLEQP KVGNGH SARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKN+APARIIP
Sbjct: 121 TPSRNLEQPVKVGNGHPSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVD F
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDSF 240

Query: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP 300
           YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVE CPDEDDTIPRQQFSF+ 
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVELCPDEDDTIPRQQFSFRR 300

Query: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360
           ISEIENAETNSILDVIGIVTS+NPSIPVLRKNGMETQRRVV LKDASGRS+ELT+WG+FC
Sbjct: 301 ISEIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGEFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420
           NKEG+KLQEII SGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDL EAHILR+WYDG
Sbjct: 361 NKEGKKLQEIIDSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRDWYDG 420

Query: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKN+TSLSISKEI+PGSAKN+IRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNSTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKW C+RCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWQCERCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV 600
           TGEEILGVSAKELY+LKYE QD+VKFGEIIRS IF QFLFRLKIKEE+YGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYMLKYEEQDEVKFGEIIRSKIFDQFLFRLKIKEEMYGDEQRVKNTVV 600

Query: 601 KADRVNYSSESKYMLDLLS 619
           KADRVNY+SESKYMLDLLS
Sbjct: 601 KADRVNYTSESKYMLDLLS 619

[Close]

BLAST of IVF0024005 vs. NCBI nr
Match: KAG6599522.1 (Replication protein A 70 kDa DNA-binding subunit A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1161 bits (3003), Expect = 0.0
Identity = 583/620 (94.03%), Postives = 601/620 (96.94%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGN QERYSLLISDAVS EQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNTQERYSLLISDAVSTEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA 120
           IVKTGRVKKGSVIQLIDYVCSPIK+RK+IVVL LETIILD EIIGNPKSSAQSE FAQKA
Sbjct: 61  IVKTGRVKKGSVIQLIDYVCSPIKSRKVIVVLSLETIILDSEIIGNPKSSAQSENFAQKA 120

Query: 121 TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPARIIP 180
            PSGNLEQPAKVGN  +SARNPV+NVQSFQATVQPPYQPPPNYKNHGAIIKN+APAR+IP
Sbjct: 121 MPSGNLEQPAKVGNRLVSARNPVNNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARVIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP 300
           YEVIEVGKVYLISKGSLKPARKDFNHL NEWEVFLEASSTVE CPDEDDTIPRQQFSF+P
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLNNEWEVFLEASSTVEHCPDEDDTIPRQQFSFRP 300

Query: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360
           ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRV+ LKDASGRSVELT+WGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVLNLKDASGRSVELTLWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420
           NKEGQ LQEII SGLSPVLAVKSGKVSDFTGKSIGTISSTQLF+NPDL EA ILR+WYDG
Sbjct: 361 NKEGQNLQEIINSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFVNPDLSEALILRDWYDG 420

Query: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEI+ GSAKN+IRK+VSQIKDEGLGR+DKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIMSGSAKNEIRKSVSQIKDEGLGRSDKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKW+CDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV 600
           TGEEILGVSAKELY+LKYE QDDVKFGEIIRS IF QFLFRLKIKEE+YGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYILKYEQQDDVKFGEIIRSKIFDQFLFRLKIKEEMYGDEQRVKNTVV 600

Query: 601 KADRVNYSSESKYMLDLLSK 620
           KADRVNYSSESKYMLDLLSK
Sbjct: 601 KADRVNYSSESKYMLDLLSK 620

[Close]

BLAST of IVF0024005 vs. TAIR 10
Match: AT2G06510.1 (replication protein A 1A )

HSP 1 Score: 908.7 bits (2347), Expect = 2.6e-264
Identity = 438/638 (68.65%), Postives = 538/638 (84.33%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIG----NAQERYSLLISDAVSAEQAMLAT 60
           MPV LTPNAI+AI  GDVN KPL+QVL+IK+IG     +QERY  LISD VSA+ AM+A 
Sbjct: 1   MPVSLTPNAITAIHDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAV 60

Query: 61  QLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETF 120
           QLND VK+G+ +KGS++QLIDY+CS +K RK+IVVL +ETI+   E IGNP    +++T 
Sbjct: 61  QLNDRVKSGQFEKGSIVQLIDYICSDVKGRKLIVVLNMETIVQQSETIGNPTIFGETDTE 120

Query: 121 AQKA-TPSGNLEQPAKVGNGH--------------LSARNPVHNVQSFQATVQPPYQPPP 180
           AQK  + +GN+  P +V                  ++ +N  +N  SF+ +VQP YQPP 
Sbjct: 121 AQKTFSGTGNIPPPNRVVFNEPMVQHSVNRAPPRGVNIQNQANNTPSFRPSVQPSYQPPA 180

Query: 181 NYKNHGAIIKNDAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLL 240
           +Y+NHG I+KN+APAR+IPIAALNPYQGRWAIKARVTAKGD+RRYNNAKGDGKVFSFDLL
Sbjct: 181 SYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLL 240

Query: 241 DSDGGEIRVTCFNAVVDRFYEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTV 300
           D DGGEIRVTCFNA+VDRFY+V EVGKVYLISKGSLKPA+K+FNHLKNEWE+FLE++STV
Sbjct: 241 DYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTV 300

Query: 301 EPCPDEDDTIPRQQFSFKPISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVV 360
           E CPDED +IP+QQFSF+PIS+IENAE N+ILDVIG+VTS+NPS+P+LRKNGMET RR++
Sbjct: 301 ELCPDEDGSIPKQQFSFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRIL 360

Query: 361 YLKDASGRSVELTMWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQ 420
            LKD SG++VE+T+WG+FCN++G++L+E++ S   PVLA+K+GKVSDF+GKS+GTISSTQ
Sbjct: 361 NLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQ 420

Query: 421 LFINPDLPEAHILREWYDGGGKNTTSLSISKEIVPGS-AKNDIRKTVSQIKDEGLGRADK 480
           LFINPD PEAH LR W+D GGK+T S SIS++ +PG  ++N+IRK VSQIK+EGLGR+DK
Sbjct: 421 LFINPDFPEAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDK 480

Query: 481 PDWITVKATISFIKTDSFCYTACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRY 540
           PDWITVKATISFIKTDSFCYTACPLMIGD+QCNKKVTRSG ++W+CDRCNQE ++CDYRY
Sbjct: 481 PDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRY 540

Query: 541 LLQAQIQDHTGLTWVTAFQETGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLF 600
           LLQ QIQDHTGLTW+TAFQETGEEI+G  AK+LY +KYE + + +F EI+R  +F Q++ 
Sbjct: 541 LLQVQIQDHTGLTWITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYML 600

Query: 601 RLKIKEEVYGDEQRVKNTVVKADRVNYSSESKYMLDLL 619
           +LKIKEE YGDEQRVK TVVK D+VNY+SESKYMLDLL
Sbjct: 601 KLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLDLL 638

[Close]

BLAST of IVF0024005 vs. TAIR 10
Match: AT2G06510.2 (replication protein A 1A )

HSP 1 Score: 873.6 bits (2256), Expect = 9.3e-254
Identity = 419/613 (68.35%), Postives = 517/613 (84.34%), Query Frame = 0


Query: 26  VLDIKLIG----NAQERYSLLISDAVSAEQAMLATQLNDIVKTGRVKKGSVIQLIDYVCS 85
           VL+IK+IG     +QERY  LISD VSA+ AM+A QLND VK+G+ +KGS++QLIDY+CS
Sbjct: 3   VLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAVQLNDRVKSGQFEKGSIVQLIDYICS 62

Query: 86  PIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA-TPSGNLEQPAKVGNGH---- 145
            +K RK+IVVL +ETI+   E IGNP    +++T AQK  + +GN+  P +V        
Sbjct: 63  DVKGRKLIVVLNMETIVQQSETIGNPTIFGETDTEAQKTFSGTGNIPPPNRVVFNEPMVQ 122

Query: 146 ----------LSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPARIIPIAALNP 205
                     ++ +N  +N  SF+ +VQP YQPP +Y+NHG I+KN+APAR+IPIAALNP
Sbjct: 123 HSVNRAPPRGVNIQNQANNTPSFRPSVQPSYQPPASYRNHGPIMKNEAPARVIPIAALNP 182

Query: 206 YQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEVIEV 265
           YQGRWAIKARVTAKGD+RRYNNAKGDGKVFSFDLLD DGGEIRVTCFNA+VDRFY+V EV
Sbjct: 183 YQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRFYDVTEV 242

Query: 266 GKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKPISEIEN 325
           GKVYLISKGSLKPA+K+FNHLKNEWE+FLE++STVE CPDED +IP+QQFSF+PIS+IEN
Sbjct: 243 GKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDIEN 302

Query: 326 AETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFCNKEGQK 385
           AE N+ILDVIG+VTS+NPS+P+LRKNGMET RR++ LKD SG++VE+T+WG+FCN++G++
Sbjct: 303 AENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKAVEVTLWGEFCNRDGRQ 362

Query: 386 LQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDGGGKNTT 445
           L+E++ S   PVLA+K+GKVSDF+GKS+GTISSTQLFINPD PEAH LR W+D GGK+T 
Sbjct: 363 LEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTA 422

Query: 446 SLSISKEIVPGS-AKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCYTACPL 505
           S SIS++ +PG  ++N+IRK VSQIK+EGLGR+DKPDWITVKATISFIKTDSFCYTACPL
Sbjct: 423 SFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIKTDSFCYTACPL 482

Query: 506 MIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEI 565
           MIGD+QCNKKVTRSG ++W+CDRCNQE ++CDYRYLLQ QIQDHTGLTW+TAFQETGEEI
Sbjct: 483 MIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEI 542

Query: 566 LGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVVKADRV 619
           +G  AK+LY +KYE + + +F EI+R  +F Q++ +LKIKEE YGDEQRVK TVVK D+V
Sbjct: 543 MGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKV 602

[Close]

BLAST of IVF0024005 vs. TAIR 10
Match: AT5G45400.1 (Replication factor-A protein 1-related )

HSP 1 Score: 652.1 bits (1681), Expect = 4.4e-187
Identity = 343/741 (46.29%), Postives = 462/741 (62.35%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSK----PLVQVLDIKLIGN-------AQERYSLLISDAVSA 60
           M V LT   +  ++ G+V S+    P++QV ++KLI +       +  RY  L+SD    
Sbjct: 1   MAVSLTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDL 60

Query: 61  EQAMLATQLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKS 120
              ML T LN +V  G ++ GSVI+L  Y+C+ I+ R+I+V++ LE I+  C IIGNPK 
Sbjct: 61  AAGMLNTSLNSLVNQGTIQLGSVIRLTHYICNLIQTRRIVVIMQLEVIVEKCNIIGNPKE 120

Query: 121 SAQSETFAQKA-------------------------TPSGNLEQPAKVGNGH-------- 180
              S    Q+                            S N  QP  V N          
Sbjct: 121 PGHSSINPQRGGVNTQSNGGSEQQQARRSDVNGGRYGVSANSPQPQVVHNSSDAGRYCVS 180

Query: 181 -------------------LSARNP----VHN---------------------------- 240
                              +SA +P    VHN                            
Sbjct: 181 ANSPQPQVVHSSSDAGRYGVSANSPQRQVVHNSPDAGRYGQPQVSQRYGTGSGYPETSPS 240

Query: 241 ------------------------VQSFQATVQPPYQP--PPNYKNHGAIIKNDAPARII 300
                                     ++   VQ  YQP  PP Y N G + +N+AP RI 
Sbjct: 241 TRPYVSSNAGYGGSRQDQPRAPTATTAYSRPVQSAYQPQQPPMYVNRGPVARNEAPPRIN 300

Query: 301 PIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 360
           PIAALNPYQGRW IK RVT+K DLRR+NN +G+GK+FSFDLLD+DGGEIRVTCFN  VD+
Sbjct: 301 PIAALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFNDAVDQ 360

Query: 361 FYEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFK 420
           F++ I VG VYLIS+G+LKPA+K+FNHL N++E+ L+++ST++PC D D TIPR  F F+
Sbjct: 361 FFDKIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPCED-DGTIPRYHFHFR 420

Query: 421 PISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDF 480
            I +IEN E NS  DVIGIV+SI+P++ ++RKN  E Q+R + LKD SGRSVE+TMWG+F
Sbjct: 421 NIGDIENMENNSTTDVIGIVSSISPTVAIMRKNLTEVQKRSLQLKDMSGRSVEVTMWGNF 480

Query: 481 CNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYD 540
           CN EGQKLQ +  SG+ PVLA+K+G++ +F GK + TI ++Q FI PD PEA  LR+WY+
Sbjct: 481 CNAEGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEARELRQWYE 540

Query: 541 GGGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFC 600
             G+N    SIS+E   G  + ++RK ++QIKDE LG ++KPDWITV ATISF+K ++FC
Sbjct: 541 REGRNAHFTSISREF-SGVGRQEVRKVIAQIKDEKLGTSEKPDWITVCATISFMKVENFC 600

Query: 601 YTACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQ 621
           YTACP+M GDR C+KKVT +G+  W C++C++  ++CDYRY+LQ Q+QDHT LTW TAFQ
Sbjct: 601 YTACPIMNGDRPCSKKVTNNGDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTWATAFQ 660

[Close]

BLAST of IVF0024005 vs. TAIR 10
Match: AT4G19130.1 (Replication factor-A protein 1-related )

HSP 1 Score: 636.7 bits (1641), Expect = 1.9e-182
Identity = 325/672 (48.36%), Postives = 452/672 (67.26%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSK----PLVQVLDIKLIGNAQ----ERYSLLISDAVSAEQA 60
           M V LT  AI  I+ G+V ++    P++QV D+K I   Q    ER+ +++SD     Q 
Sbjct: 1   MEVSLTAGAIGKIMNGEVTTEADMIPVLQVTDLKQIMAQQDPTRERFRMVLSDGTYLHQG 60

Query: 61  MLATQLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQ 120
           ML T LN++VK G ++ GS+++L  +V   IK R+I++V  LE +    +IIG+P    +
Sbjct: 61  MLGTDLNNLVKEGTLQPGSIVRLTRFVGDVIKGRRIVIVPQLEVLKQISDIIGHPVPGGK 120

Query: 121 SETFAQKATPSG-NLEQPAKVGNGHLSARN---------------------PVHNVQSFQ 180
                Q+   SG       + G+G     N                     P     S +
Sbjct: 121 HND--QRGADSGIKFNTTEQQGSGIRQVNNIEPGRSNAAISPQVGGTGSSVPASTTPSTR 180

Query: 181 ATVQP----------------------PYQPPPNYKNHGAIIKNDAPARIIPIAALNPYQ 240
           A   P                      P  PPP Y N G + +N+AP +IIP+ AL+PY 
Sbjct: 181 AYSNPSSGNGVTRQDYARDPPTSYPHQPQPPPPMYANRGPVARNEAPPKIIPVNALSPYS 240

Query: 241 GRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEVIEVGK 300
           GRW IKARVT K  L++Y+N +G+GKVF+FDLLD+DGGEIRVTCFNAV D+FY+ I VG 
Sbjct: 241 GRWTIKARVTNKAALKQYSNPRGEGKVFNFDLLDADGGEIRVTCFNAVADQFYDQIVVGN 300

Query: 301 VYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKPISEIENAE 360
           +YLIS+GSL+PA+K+FNHL+N++E+ L+ +ST++ C +ED  IPR QF F+ I +IE+ E
Sbjct: 301 LYLISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPRHQFHFRTIGDIESME 360

Query: 361 TNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFCNKEGQKLQ 420
            N I+DVIGIV+SI+P++ + RKNG  T +R + LKD SGRSVE+TMWGDFCN EGQ+LQ
Sbjct: 361 NNCIVDVIGIVSSISPTVTITRKNGTATPKRSLQLKDMSGRSVEVTMWGDFCNAEGQRLQ 420

Query: 421 EIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDGGGKNTTSL 480
            +  SG+ PVLAVK+G++S+F GK++ TI S+QLFI+PD  EA  L+ W++  GK+   +
Sbjct: 421 SLCDSGVFPVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWFEREGKSVPCI 480

Query: 481 SISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCYTACPLMIG 540
           S+S+E   GS K D+RKT+SQIKDE LG ++KPDWITV ATI ++K D+FCYTACP+M G
Sbjct: 481 SLSREF-SGSGKVDVRKTISQIKDEKLGTSEKPDWITVSATILYLKFDNFCYTACPIMNG 540

Query: 541 DRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGV 600
           DR C+KKVT +G+  W C++C++  ++CDYRY+LQ QIQDHT LT VTAFQE GEEI+G+
Sbjct: 541 DRPCSKKVTDNGDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCVTAFQEAGEEIMGI 600

Query: 601 SAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVVKADRVNYS 621
           SAK+LY +K E++D+ KF +IIR   F ++ F+LK+KEE + DEQRVK TVVK D++NYS
Sbjct: 601 SAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNFKLKVKEETFSDEQRVKATVVKVDKLNYS 660

[Close]

BLAST of IVF0024005 vs. TAIR 10
Match: AT5G61000.1 (Replication factor-A protein 1-related )

HSP 1 Score: 333.6 bits (854), Expect = 3.5e-91
Identity = 213/645 (33.02%), Postives = 354/645 (54.88%), Query Frame = 0


Query: 1   MPVHLTPNAISAIV------AGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAML 60
           M   +TP+AIS ++      +    S+ +VQV+D+K IGN   RY+   +D  +  +AM 
Sbjct: 1   MQTSVTPDAISTVLSNPSFDSSSDRSEIVVQVVDLKPIGN---RYTFSANDGKTKVKAMF 60

Query: 61  ATQLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSE 120
              L   + +G+++   +I+LID+  + I ++     L     +  CE +G   S   SE
Sbjct: 61  TASLTPEIISGKIQNLGLIRLIDFTVNDISSKSTKYFL-----VTKCEAVG---SVLDSE 120

Query: 121 TFAQKATPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIK--- 180
                 +      +P K    H S  +P+++V S   T++P  +     K+   I+    
Sbjct: 121 INLDSKSGEEEAREPKKQKLEH-SPVSPLNDVVSTGITLKPKQEFVA--KSASQIMSEQR 180

Query: 181 -NDAPA-------RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDS 240
            N APA       R+ P+ +LNPYQG W IK RVT KG +R Y NA+G+G VF+ +L D 
Sbjct: 181 GNAAPAARMAMTRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDE 240

Query: 241 DGGEIRVTCFNAVVDRFYEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEP 300
           +G +I+ T FN    +F++  ++GKVY IS+GSLK A K F  ++N++E+ L  +S VE 
Sbjct: 241 EGTQIQATMFNDAARKFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEE 300

Query: 301 CPDEDDTIPRQQFSFKPISEIE-NAETNSILDVIGIVTSINPSIPVLRKNGME-TQRRVV 360
              E+  IP  +F+F PI E+        ++D+IG+V S++P++ + R+   E   +R +
Sbjct: 301 ASSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDI 360

Query: 361 YLKDASGRSVELTMWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQ 420
            L D S ++V +++W D     GQ+L ++  +  SPV+A+KS KV DF G S+ TIS + 
Sbjct: 361 TLADESRKTVVVSLWNDLATGIGQELLDM--ADQSPVIAIKSLKVGDFQGVSLSTISRSN 420

Query: 421 LFINPDLPEAHILREWYDGGGKNTTSLSISKEIVPGSAKNDIRK------TVSQIKDEGL 480
           + INP+ PEA  L+ W+D  GK  +  SI   + P SAKN  R        +S I     
Sbjct: 421 VVINPESPEAKKLKSWFDSEGKEISMSSIGSGMSP-SAKNGSRSLYTDRVLLSHITSNPS 480

Query: 481 GRADKPDWITVKATISFIKTD-SFCYTACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFE 540
              +KP + + +A ISFIK D +  Y AC      + CNKKVT + +S + C+ C +++E
Sbjct: 481 LFEEKPVFFSTRAYISFIKPDQTMWYQAC------KTCNKKVTEALDSGYWCEGCQRKYE 540

Query: 541 DCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSAKELYVLKYENQDDVKFGEIIRSTI 600
           +C  RY++  ++ D +G TW+++F +  E+ILG SA EL  LK E  +  ++   ++   
Sbjct: 541 ECSLRYIMAVKVTDSSGETWISSFNDEAEKILGCSADELNKLKSEEGEVNEYQTKLKEAT 600

Query: 601 FGQFLFRLKIKEEVYGDEQRVKNTVVKADRVNYSSESKYMLDLLS 620
           +   +FR+ + +  Y  E+R + TV     +++++E++ +L  +S
Sbjct: 601 WSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAETRLLLQDIS 622

The following BLAST results are available for this feature:

BLAST of IVF0024005 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKI4	3.7e-263	68.65	Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana OX=37...	[more]
Q6YZ49	4.3e-227	58.31	Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japoni...	[more]
Q9FHJ6	6.2e-186	46.29	Replication protein A 70 kDa DNA-binding subunit C OS=Arabidopsis thaliana OX=37...	[more]
F4JSG3	2.7e-181	48.36	Replication protein A 70 kDa DNA-binding subunit E OS=Arabidopsis thaliana OX=37...	[more]
Q65XV7	1.0e-156	41.23	Replication protein A 70 kDa DNA-binding subunit C OS=Oryza sativa subsp. japoni...	[more]

BLAST of IVF0024005 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAT4	0.0e+00	99.84	Replication protein A subunit OS=Cucumis melo OX=3656 GN=LOC103498706 PE=3 SV=1	[more]
A0A0A0LKL9	0.0e+00	98.56	Replication protein A subunit OS=Cucumis sativus OX=3659 GN=Csa_2G000250 PE=3 SV...	[more]
A0A6J1G4P2	0.0e+00	93.87	Replication protein A subunit OS=Cucurbita moschata OX=3662 GN=LOC111450710 PE=3...	[more]
A0A6J1KGE2	0.0e+00	93.23	Replication protein A subunit OS=Cucurbita maxima OX=3661 GN=LOC111493656 PE=3 S...	[more]
A0A6J1DMC5	0.0e+00	90.85	Replication protein A subunit OS=Momordica charantia OX=3673 GN=LOC111021895 PE=...	[more]

BLAST of IVF0024005 vs. NCBI nr


Match Name	Identity	Description
XP_008459663.1	99.84	PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Cucumis melo]	[more]
XP_011648589.2	98.56	replication protein A 70 kDa DNA-binding subunit A [Cucumis sativus]	[more]
KGN60516.1	98.56	hypothetical protein Csa_019336 [Cucumis sativus]	[more]
XP_038890007.1	94.18	replication protein A 70 kDa DNA-binding subunit A [Benincasa hispida] >XP_03889...	[more]
KAG6599522.1	94.03	Replication protein A 70 kDa DNA-binding subunit A, partial [Cucurbita argyrospe...	[more]

BLAST of IVF0024005 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G06510.1	2.6e-264	68.65	replication protein A 1A	[more]
AT2G06510.2	9.3e-254	68.35	replication protein A 1A	[more]
AT5G45400.1	4.4e-187	46.29	Replication factor-A protein 1-related	[more]
AT4G19130.1	1.9e-182	48.36	Replication factor-A protein 1-related	[more]
AT5G61000.1	3.5e-91	33.02	Replication factor-A protein 1-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 177..287 e-value: 1.2E-35 score: 124.0
None	No IPR available	GENE3D	2.40.50.140		coord: 431..622 e-value: 1.3E-57 score: 196.2
None	No IPR available	GENE3D	2.40.50.140		coord: 290..430 e-value: 1.3E-37 score: 130.6
None	No IPR available	GENE3D	2.40.50.140		coord: 3..111 e-value: 1.4E-27 score: 97.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..134
None	No IPR available	PANTHER	PTHR23273	REPLICATION FACTOR A 1, RFA1	coord: 2..618
None	No IPR available	PANTHER	PTHR23273:SF47	REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A	coord: 2..618
None	No IPR available	CDD	cd04474	RPA1_DBD_A	coord: 180..283 e-value: 1.40505E-49 score: 165.497
None	No IPR available	CDD	cd04475	RPA1_DBD_B	coord: 312..419 e-value: 3.67546E-33 score: 120.767
IPR031657	Replication protein A, OB domain	PFAM	PF16900	REPA_OB_2	coord: 301..405 e-value: 1.8E-28 score: 98.3
IPR004365	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	PFAM	PF01336	tRNA_anti-codon	coord: 192..263 e-value: 8.1E-9 score: 35.4
IPR013955	Replication factor A, C-terminal	PFAM	PF08646	Rep_fac-A_C	coord: 463..614 e-value: 4.0E-51 score: 172.6
IPR013955	Replication factor A, C-terminal	CDD	cd04476	RPA1_DBD_C	coord: 447..620 e-value: 3.74919E-65 score: 209.472
IPR007199	Replication factor-A protein 1, N-terminal	PFAM	PF04057	Rep-A_N	coord: 5..97 e-value: 9.6E-28 score: 96.2
IPR007199	Replication factor-A protein 1, N-terminal	CDD	cd04477	RPA1N	coord: 9..98 e-value: 1.36379E-28 score: 107.668
IPR004591	Replication factor A protein 1	TIGRFAM	TIGR00617	TIGR00617	coord: 4..620 e-value: 2.3E-190 score: 632.1
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 177..291
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 1..106
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 295..425
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 444..621

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024005.2	IVF0024005.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006268	DNA unwinding involved in DNA replication
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0007140	male meiotic nuclear division
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0009555	pollen development
biological_process	GO:0007004	telomere maintenance via telomerase
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005662	DNA replication factor A complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0043047	single-stranded telomeric DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding