IVF0023946 (gene) Melon (IVF77) v1

Overview


Name	IVF0023946
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Homeobox domain-containing protein
Location	chr12: 2118079 .. 2119553 (-)
RNA-Seq Expression	IVF0023946
Synteny	IVF0023946

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGCGGAGATGGGGGGCGGAGGTGGTGGTGGTGGGCCTCCGGTGAGTTCACGGTGGAATCCGACAAAAGAGCAAATAAGCATATTGGAGAATTTATATAGACAAGGAGTGAGAACGCCGAGTGCTGATCAAATACAACAAATAACGGTTAGGCTTAAGGATTATGGTCATATCGAAGGCAAAAATGTGTTCTATTGGTTTCAAAATCATAAAGCTAGACAAAGGCAGAAGCAAAAACAACAGCATCATCATCATCATCATCATTTTAATTCCTCTTTCCCTTTTTATAATCACTTCCTTCACTTCAATCACACCAACTCTCCTTTCCCTCCCCCTCCCCCTCCTCCCCCTCCTCCCAATAATGGTTCGTCTAATGCTCATCTCCCTCATACATACTATACTATACTATACTATACTATACTTTTAGTTATGCTCCTTTTTACATCTTTTGTTACCTTACGTTCATGGTGTGATATCATTTTCTTTTCTTTTCTTTTTAGTTGACCGAAAAAAGAAAAAAAGTTCAAATCTTATACCTTTTTTTCTTTCAATATCAAGATATATCTTTTCATACTCAAAACATCTCAAAATCCTTTTTTTTCTTCTCTAATTGATCTCTTTCAAACTATATGATATTGATTGATAAGATTGTTAAGAAATTAAATTCACATCTAACCCCCATTAGCCTAAATTTTGTTGGGTTTAATTCCAATTTCAAGTTTCGTTTTATTTTTTTGGTTGATAAATGTTTTGTTTTTGAAAATTTTAGGTTTGTTTTCTCCTTTTTAAATGAAGTACTTGAATTCTTAGTGAAATTTCAAACACAATACAAAATATTATAATACTATTCGTTTTAGTTTTAGAATTTAGAATATTAAAATTTTGAAAACGTGGGTTAGGTTAGAAAGTTGTTATCATGAGCTTAATTTTTAAAAACTAAAATTCAAGACATTTCTATGTTCGAATATTGTAATGTTATTTGTTGATAATCACTTAGCGTTGAAGTTTACTCTTTATCGATTATCTTAAGCTTCTTTTCTGTTACGTACAATTGTAATGAAATTATTTTGGACTAATATGAAAATTTCTTGTTTTGTTCATTATTATTATGATGATCAGTGGTTTGCAGCCCATACTACGTACATCAAAACGAAGTCGGACTGTATCCACCATACCAAAACAATTCAATGGTGATTCAAAGCAGTGGGATTGTGAAGAAAAGATCAAAAAGTGAGAGAAGAAATTGTATTATTAATATCAATGAGGAATCAACTATCAATAATAATAACCTTAGCTATCAAACTACTGAAACTCTCTCCCTCTTTCCCACGCACCCAACTGGGGATTTACAAGCCGGCCCACAGTCGCCACCGCCACCGACACTGACGACGGTGTCCGCTTCGGCCTCTGATGGAATCTCTGACGACGATTCTGCTGGTGGCCGTCAACCTTACTTTGAATTTTTTATGTAG

mRNA sequence

ATGACGGCGGAGATGGGGGGCGGAGGTGGTGGTGGTGGGCCTCCGGTGAGTTCACGGTGGAATCCGACAAAAGAGCAAATAAGCATATTGGAGAATTTATATAGACAAGGAGTGAGAACGCCGAGTGCTGATCAAATACAACAAATAACGGTTAGGCTTAAGGATTATGGTCATATCGAAGGCAAAAATGTGTTCTATTGGTTTCAAAATCATAAAGCTAGACAAAGGCAGAAGCAAAAACAACAGCATCATCATCATCATCATCATTTTAATTCCTCTTTCCCTTTTTATAATCACTTCCTTCACTTCAATCACACCAACTCTCCTTTCCCTCCCCCTCCCCCTCCTCCCCCTCCTCCCAATAATGTGGTTTGCAGCCCATACTACGTACATCAAAACGAAGTCGGACTGTATCCACCATACCAAAACAATTCAATGGTGATTCAAAGCAGTGGGATTGTGAAGAAAAGATCAAAAAGTGAGAGAAGAAATTGTATTATTAATATCAATGAGGAATCAACTATCAATAATAATAACCTTAGCTATCAAACTACTGAAACTCTCTCCCTCTTTCCCACGCACCCAACTGGGGATTTACAAGCCGGCCCACAGTCGCCACCGCCACCGACACTGACGACGGTGTCCGCTTCGGCCTCTGATGGAATCTCTGACGACGATTCTGCTGGTGGCCGTCAACCTTACTTTGAATTTTTTATGTAG

Coding sequence (CDS)

ATGACGGCGGAGATGGGGGGCGGAGGTGGTGGTGGTGGGCCTCCGGTGAGTTCACGGTGGAATCCGACAAAAGAGCAAATAAGCATATTGGAGAATTTATATAGACAAGGAGTGAGAACGCCGAGTGCTGATCAAATACAACAAATAACGGTTAGGCTTAAGGATTATGGTCATATCGAAGGCAAAAATGTGTTCTATTGGTTTCAAAATCATAAAGCTAGACAAAGGCAGAAGCAAAAACAACAGCATCATCATCATCATCATCATTTTAATTCCTCTTTCCCTTTTTATAATCACTTCCTTCACTTCAATCACACCAACTCTCCTTTCCCTCCCCCTCCCCCTCCTCCCCCTCCTCCCAATAATGTGGTTTGCAGCCCATACTACGTACATCAAAACGAAGTCGGACTGTATCCACCATACCAAAACAATTCAATGGTGATTCAAAGCAGTGGGATTGTGAAGAAAAGATCAAAAAGTGAGAGAAGAAATTGTATTATTAATATCAATGAGGAATCAACTATCAATAATAATAACCTTAGCTATCAAACTACTGAAACTCTCTCCCTCTTTCCCACGCACCCAACTGGGGATTTACAAGCCGGCCCACAGTCGCCACCGCCACCGACACTGACGACGGTGTCCGCTTCGGCCTCTGATGGAATCTCTGACGACGATTCTGCTGGTGGCCGTCAACCTTACTTTGAATTTTTTATGTAG

Protein sequence

MTAEMGGGGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHHHFNSSFPFYNHFLHFNHTNSPFPPPPPPPPPPNNVVCSPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDDDSAGGRQPYFEFFM

Homology

[Close]

BLAST of IVF0023946 vs. ExPASy Swiss-Prot
Match: Q6X7K1 (WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.4e-29
Identity = 104/262 (39.69%), Postives = 139/262 (53.05%), Query Frame = 0


Query: 13  GPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHK 72
           G   SSRWNPTK+QI++LENLY++G+RTPSADQIQQIT RL+ YGHIEGKNVFYWFQNHK
Sbjct: 8   GTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHK 67

Query: 73  ARQRQKQKQQHHHHHHHFNSSFPFYNHFLHFNHTNSPFPPPPPPPPPPNNVVC-SPYYV- 132
           ARQRQKQKQ+             ++N  LH   T+  F      PPP +NV C SPYY+ 
Sbjct: 68  ARQRQKQKQER----------MAYFNRLLH--KTSRFF-----YPPPCSNVGCVSPYYLQ 127

Query: 133 -----HQNEVG-LYPP---YQNNSMVIQSSGIVKKRSKSERRNCIININ----------- 192
                H N+ G +Y     ++NN M+   SG  +KR+ ++ +  + +I            
Sbjct: 128 QASDHHMNQHGSVYTNDLLHRNNVMI--PSGGYEKRTVTQHQKQLSDIRTTAATRMPISP 187

Query: 193 -----EESTINNN-------NLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASA 239
                +   + +N       N++    +TL LFP  P     A          ++  A  
Sbjct: 188 SSLRFDRFALRDNCYAGEDINVNSSGRKTLPLFPLQPLNASNADGMG------SSSFALG 244

[Close]

BLAST of IVF0023946 vs. ExPASy Swiss-Prot
Match: A2WWU7 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.4e-24
Identity = 113/309 (36.57%), Postives = 141/309 (45.63%), Query Frame = 0


Query: 2   TAEMGGGGGG--GG---------PPVS-----------SRWNPTKEQISILENLYRQGVR 61
           T  +GGGGGG  GG         PP+S           +RW PTKEQI++LE LYRQG+R
Sbjct: 5   TTTLGGGGGGRAGGFSDPPSPLSPPLSPASAAAAALANARWTPTKEQIAVLEGLYRQGLR 64

Query: 62  TPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHHHFNSSF--PFY 121
           TP+A+QIQQIT RL+++GHIEGKNVFYWFQNHKARQRQKQKQQ      +F+  F  P  
Sbjct: 65  TPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQKQQ---SFDYFSKLFRRPPP 124

Query: 122 NHFLH------FNHTNSP--FPPPPPPPPPPNNVVC-------------------SPYYV 181
              LH      F    +P   PPPPPPP       C                   + YY 
Sbjct: 125 LPVLHRPLARPFPLAMAPTAMPPPPPPPATTTTAACNAGGVMFRTPSFMPVATNNASYYP 184

Query: 182 HQNEVGLYP-------------PYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINN 239
            Q    LYP             P    +M +Q+       + +  R       E      
Sbjct: 185 QQQTPLLYPGMEVCPHDKSTAQPPATTTMYLQAPPSSAHLAAAAGRGAA----EAEGHGR 244

[Close]

BLAST of IVF0023946 vs. ExPASy Swiss-Prot
Match: Q8LR86 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.4e-24
Identity = 113/309 (36.57%), Postives = 141/309 (45.63%), Query Frame = 0


Query: 2   TAEMGGGGGG--GG---------PPVS-----------SRWNPTKEQISILENLYRQGVR 61
           T  +GGGGGG  GG         PP+S           +RW PTKEQI++LE LYRQG+R
Sbjct: 5   TTTLGGGGGGRAGGFSDPPSPLSPPLSPASAAAAALANARWTPTKEQIAVLEGLYRQGLR 64

Query: 62  TPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHHHFNSSF--PFY 121
           TP+A+QIQQIT RL+++GHIEGKNVFYWFQNHKARQRQKQKQQ      +F+  F  P  
Sbjct: 65  TPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQKQQ---SFDYFSKLFRRPPP 124

Query: 122 NHFLH------FNHTNSP--FPPPPPPPPPPNNVVC-------------------SPYYV 181
              LH      F    +P   PPPPPPP       C                   + YY 
Sbjct: 125 LPVLHRPLARPFPLAMAPTAMPPPPPPPATTTTAACNAGGVMFRTPSFMPVATNNASYYP 184

Query: 182 HQNEVGLYP-------------PYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINN 239
            Q    LYP             P    +M +Q+       + +  R       E      
Sbjct: 185 QQQTPLLYPGMEVCPHDKSTAQPPATTTMYLQAPPSSAHLAAAAGRGAA----EAEGHGR 244

[Close]

BLAST of IVF0023946 vs. ExPASy Swiss-Prot
Match: A2XZR3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.7e-19
Identity = 53/99 (53.54%), Postives = 66/99 (66.67%), Query Frame = 0


Query: 4   EMGGGGGGGGPPV---SSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIE 63
           + GGGGG  G      ++RW PT EQ+ +LE +YR G+RTP+A QIQQIT  L  YG IE
Sbjct: 9   QSGGGGGSTGAAAVGSTTRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIE 68

Query: 64  GKNVFYWFQNHKARQRQKQKQQ-----------HHHHHH 89
           GKNVFYWFQNHKAR RQK +++           H++HHH
Sbjct: 69  GKNVFYWFQNHKARDRQKLRRRLCISHHLLSCAHYYHHH 107

[Close]

BLAST of IVF0023946 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 5.0e-19
Identity = 62/115 (53.91%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 14  PP--VSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNH 73
           PP  VSSRWNPT +Q+ +LE LYRQG RTPSAD IQQIT +L+ YG IEGKNVFYWFQNH
Sbjct: 69  PPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNH 128

Query: 74  KARQRQKQKQQHHHHHHHFNSSFPFYNHFLHFNHTNSPFPPPPPPPPPPNNVVCS 127
           KAR+RQK+++Q    H     S       L  NH      PP        N +CS
Sbjct: 129 KARERQKRRRQMETGHEETVLS----TASLVSNHGFDKKDPPGYKVEQVKNWICS 179

[Close]

BLAST of IVF0023946 vs. ExPASy TrEMBL
Match: A0A0A0LVA9 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G505930 PE=3 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.8e-112
Identity = 216/244 (88.52%), Postives = 222/244 (90.98%), Query Frame = 0


Query: 1   MTAEMGG-----GGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD 60
           MTAE+G      GGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD
Sbjct: 1   MTAEVGDGGGGVGGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD 60

Query: 61  YGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHHHFNSSFPFYNHFLHFNHTNSPFPPPPP 120
           YGHIEGKNVFYWFQNHKARQRQKQKQQ  HHHHHFNSSFPF+NHFLHFNH NSPF PPPP
Sbjct: 61  YGHIEGKNVFYWFQNHKARQRQKQKQQ--HHHHHFNSSFPFFNHFLHFNHNNSPF-PPPP 120

Query: 121 PPPPPNNVVCSPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTI 180
           PPPPPNNVVCSPYYVHQN+VGLYP YQNNSMVIQS GI  KRSKSERRNCIININEESTI
Sbjct: 121 PPPPPNNVVCSPYYVHQNDVGLYPQYQNNSMVIQSGGIETKRSKSERRNCIININEESTI 180

Query: 181 NNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDDDSAGGRQPYF 240
           N+NNLSYQTTETLSLFPTHPTGDLQA PQSPPPP++  V  SASD IS DDSA GRQPYF
Sbjct: 181 NDNNLSYQTTETLSLFPTHPTGDLQASPQSPPPPSM--VPTSASDEISVDDSAHGRQPYF 239

[Close]

BLAST of IVF0023946 vs. ExPASy TrEMBL
Match: A0A6J1E0T1 (WUSCHEL-related homeobox 2 OS=Momordica charantia OX=3673 GN=LOC111025366 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.9e-61
Identity = 140/228 (61.40%), Postives = 160/228 (70.18%), Query Frame = 0


Query: 12  GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNH 71
           GG P SSRWNPTKEQI ILENLY+QGVRTPSADQI +IT  LK YGHIEGKNVFYWFQNH
Sbjct: 12  GGAPASSRWNPTKEQIGILENLYKQGVRTPSADQIHEITNSLKAYGHIEGKNVFYWFQNH 71

Query: 72  KARQRQKQKQQHHHHHHHFNSSFPFYNHFLHFNHTNSPFPPPPPPPPPPNNVVCSPYYVH 131
           KARQRQKQKQQ          S   ++HFLHFN  ++P+  P        NV CSPYYVH
Sbjct: 72  KARQRQKQKQQ----------SLALFSHFLHFN--SNPYSSP--------NVGCSPYYVH 131

Query: 132 QNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLF 191
           QN+VGLYPPY NNS  +QSSGI ++RSKSERRN     N E  ++  NL+ Q TETLSLF
Sbjct: 132 QNDVGLYPPYHNNSKALQSSGIARRRSKSERRNS----NGEIEVSAINLNIQ-TETLSLF 191

Query: 192 PTHPTGDLQAGPQSPPPPTLTTVSASASDGISDDDSAGGRQPYFEFFM 240
           PTHPTGDLQ GP  P      T S +++D  S   S+ GR  YF+FF+
Sbjct: 192 PTHPTGDLQVGPLPP------TSSETSADHSSAGVSSSGRGTYFDFFL 208

[Close]

BLAST of IVF0023946 vs. ExPASy TrEMBL
Match: A0A6J1KD41 (WUSCHEL-related homeobox 2-like OS=Cucurbita maxima OX=3661 GN=LOC111493249 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 3.0e-59
Identity = 140/238 (58.82%), Postives = 159/238 (66.81%), Query Frame = 0


Query: 12  GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNH 71
           GG PVSSRWNPTKEQISILENLY QGVRTPSA+QIQQIT RLK YGHIEGKNVFYWFQNH
Sbjct: 8   GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNH 67

Query: 72  KARQRQKQKQQHHHHHHHFNSSFPFYNHFLHFNHTNSPFPPPPPPPPPPNNVVCSPYYVH 131
           KARQRQKQKQ H        ++  ++NHFL       P PP  P  P P NVVCSPYYVH
Sbjct: 68  KARQRQKQKQDH-------TATLAYFNHFL-------PLPPFAPHFPSP-NVVCSPYYVH 127

Query: 132 QNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQT------- 191
           QN VG+YP  Q+NS          +RS SERR+C          NN    YQ+       
Sbjct: 128 QNNVGVYPHQQSNS--------TTRRSNSERRSC---------TNNPGFGYQSCQTDNPA 187

Query: 192 TETLSLFPTHPTGDLQAGPQSP---PPPTLTTVSASASDGISDDDSAGGRQPYFEFFM 240
           T+TL LFPTHPTGDLQ GP  P   PP  + + SAS+S G+S D+S+GG + YFEFF+
Sbjct: 188 TQTLPLFPTHPTGDLQVGPPPPSPLPPQAMASASASSSSGMSADESSGGCRTYFEFFL 213

[Close]

BLAST of IVF0023946 vs. ExPASy TrEMBL
Match: M1CZ36 (WOX2 OS=Solanum tuberosum OX=4113 GN=102585727 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.0e-43
Identity = 111/208 (53.37%), Postives = 132/208 (63.46%), Query Frame = 0


Query: 12  GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNH 71
           GG PV  RWNPTKEQI +LE+LY+QG+RTPSA+QIQQIT RL+ +GHIEGKNVFYWFQNH
Sbjct: 14  GGTPVGCRWNPTKEQIDLLESLYKQGIRTPSAEQIQQITGRLRAFGHIEGKNVFYWFQNH 73

Query: 72  KARQRQKQKQQHHHHHHHFNSSFPFYNHFLHFNHTNSPFPPPPPPPPPPNNVVCSPYYVH 131
           KARQRQKQKQ            F +YN FL   H  S FPPP  P     NVVCSPYY  
Sbjct: 74  KARQRQKQKQ----------DKFAYYNRFL---HRTSVFPPPNCP-----NVVCSPYYTA 133

Query: 132 QNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLF 191
           QN +G Y  Y   SM+I   G  K+R+   +    +N+ E++ I N N  +   ETL+LF
Sbjct: 134 QNNLGFYQQYP--SMIIPGPGGFKRRATCNQET--LNLCEQNNITNANKEFINQETLNLF 192

Query: 192 PTHPTGDLQAGPQSPPPPTLTTVSASAS 220
           P HPTG LQ         T TT S+S+S
Sbjct: 194 PLHPTGVLQ-------EKTTTTDSSSSS 192

[Close]

BLAST of IVF0023946 vs. ExPASy TrEMBL
Match: A0A1Q3AQ94 (Homeobox domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_01445 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-42
Identity = 115/249 (46.18%), Postives = 146/249 (58.63%), Query Frame = 0


Query: 9   GGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWF 68
           G  GG P SSRWNPTKEQIS+LE LYRQG+RTP+ADQIQQIT RL+ YGHIEGKNVFYWF
Sbjct: 9   GSSGGTPTSSRWNPTKEQISMLEGLYRQGIRTPTADQIQQITSRLRAYGHIEGKNVFYWF 68

Query: 69  QNHKARQRQKQKQQHHHHHHHFNSSFPFYNHFLHFNHTNSPFPPPPPPPPPPNNVVCSPY 128
           QNHKARQRQKQ+Q+          S  + N F+   HT  P  PP  P     NVVCSPY
Sbjct: 69  QNHKARQRQKQRQE----------SMAYINRFI---HTTLPMFPPSCP-----NVVCSPY 128

Query: 129 YVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININ------------EESTIN 188
           Y+ Q+++G+YPPYQ+  + + + G  ++R++ ++    I                E T +
Sbjct: 129 YLPQSDLGIYPPYQSPKVPLPAGG-YRRRTRVDKTKKTITYGIPGFDPMHASYLNEGTCH 188

Query: 189 NNNLSYQTTETLSLFPTHPTGDLQAGPQSP--------PPPTLTTVSASASDGISDDDSA 238
           N+  S Q  ETL+LFP HPTG    G + P         P T +  S    DG SD    
Sbjct: 189 NDGNSKQ--ETLALFPLHPTGITHGGTELPSLLGSTSTTPSTSSETSTGIEDGFSD---- 229

[Close]

BLAST of IVF0023946 vs. NCBI nr
Match: KGN65708.1 (hypothetical protein Csa_019930 [Cucumis sativus])

HSP 1 Score: 418 bits (1074), Expect = 2.47e-146
Identity = 216/244 (88.52%), Postives = 222/244 (90.98%), Query Frame = 0


Query: 1   MTAEMGGGGGG-----GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD 60
           MTAE+G GGGG     GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD
Sbjct: 1   MTAEVGDGGGGVGGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD 60

Query: 61  YGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHHHFNSSFPFYNHFLHFNHTNSPFPPPPP 120
           YGHIEGKNVFYWFQNHKARQRQKQKQQHHHHH  FNSSFPF+NHFLHFNH NSPFPPPPP
Sbjct: 61  YGHIEGKNVFYWFQNHKARQRQKQKQQHHHHH--FNSSFPFFNHFLHFNHNNSPFPPPPP 120

Query: 121 PPPPPNNVVCSPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTI 180
           PPPP NNVVCSPYYVHQN+VGLYP YQNNSMVIQS GI  KRSKSERRNCIININEESTI
Sbjct: 121 PPPP-NNVVCSPYYVHQNDVGLYPQYQNNSMVIQSGGIETKRSKSERRNCIININEESTI 180

Query: 181 NNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDDDSAGGRQPYF 239
           N+NNLSYQTTETLSLFPTHPTGDLQA PQSPPPP++  V  SASD IS DDSA GRQPYF
Sbjct: 181 NDNNLSYQTTETLSLFPTHPTGDLQASPQSPPPPSM--VPTSASDEISVDDSAHGRQPYF 239

[Close]

BLAST of IVF0023946 vs. NCBI nr
Match: XP_031742465.1 (WUSCHEL-related homeobox 2 [Cucumis sativus])

HSP 1 Score: 284 bits (727), Expect = 2.16e-94
Identity = 159/244 (65.16%), Postives = 164/244 (67.21%), Query Frame = 0


Query: 1   MTAEMGGGGGG-----GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD 60
           MTAE+G GGGG     GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD
Sbjct: 1   MTAEVGDGGGGVGGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKD 60

Query: 61  YGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHHHFNSSFPFYNHFLHFNHTNSPFPPPPP 120
           YGHIE                                                       
Sbjct: 61  YGHIE------------------------------------------------------- 120

Query: 121 PPPPPNNVVCSPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTI 180
                  VVCSPYYVHQN+VGLYP YQNNSMVIQS GI  KRSKSERRNCIININEESTI
Sbjct: 121 -------VVCSPYYVHQNDVGLYPQYQNNSMVIQSGGIETKRSKSERRNCIININEESTI 180

Query: 181 NNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDDDSAGGRQPYF 239
           N+NNLSYQTTETLSLFPTHPTGDLQA PQSPPPP++  V  SASD IS DDSA GRQPYF
Sbjct: 181 NDNNLSYQTTETLSLFPTHPTGDLQASPQSPPPPSM--VPTSASDEISVDDSAHGRQPYF 180

[Close]

BLAST of IVF0023946 vs. NCBI nr
Match: XP_022158904.1 (WUSCHEL-related homeobox 2 [Momordica charantia])

HSP 1 Score: 249 bits (636), Expect = 3.80e-80
Identity = 140/228 (61.40%), Postives = 160/228 (70.18%), Query Frame = 0


Query: 12  GGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNH 71
           GG P SSRWNPTKEQI ILENLY+QGVRTPSADQI +IT  LK YGHIEGKNVFYWFQNH
Sbjct: 12  GGAPASSRWNPTKEQIGILENLYKQGVRTPSADQIHEITNSLKAYGHIEGKNVFYWFQNH 71

Query: 72  KARQRQKQKQQHHHHHHHFNSSFPFYNHFLHFNHTNSPFPPPPPPPPPPNNVVCSPYYVH 131
           KARQRQKQKQQ          S   ++HFLHFN  ++P+  P        NV CSPYYVH
Sbjct: 72  KARQRQKQKQQ----------SLALFSHFLHFN--SNPYSSP--------NVGCSPYYVH 131

Query: 132 QNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLF 191
           QN+VGLYPPY NNS  +QSSGI ++RSKSERRN     N E  ++  NL+ QT ETLSLF
Sbjct: 132 QNDVGLYPPYHNNSKALQSSGIARRRSKSERRNS----NGEIEVSAINLNIQT-ETLSLF 191

Query: 192 PTHPTGDLQAGPQSPPPPTLTTVSASASDGISDDDSAGGRQPYFEFFM 239
           PTHPTGDLQ GP  P      T S +++D  S   S+ GR  YF+FF+
Sbjct: 192 PTHPTGDLQVGPLPP------TSSETSADHSSAGVSSSGRGTYFDFFL 208

[Close]

BLAST of IVF0023946 vs. NCBI nr
Match: XP_022998665.1 (WUSCHEL-related homeobox 2-like [Cucurbita maxima])

HSP 1 Score: 242 bits (617), Expect = 3.44e-77
Identity = 143/248 (57.66%), Postives = 163/248 (65.73%), Query Frame = 0


Query: 2   TAEMGGGGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEG 61
           TAE+      GG PVSSRWNPTKEQISILENLY QGVRTPSA+QIQQIT RLK YGHIEG
Sbjct: 4   TAEI------GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEG 63

Query: 62  KNVFYWFQNHKARQRQKQKQQHHHHHHHFNSSFPFYNHFLHFNHTNSPFPPPPPPPPPPN 121
           KNVFYWFQNHKARQRQKQKQ H        ++  ++NHFL       P PP  P  P PN
Sbjct: 64  KNVFYWFQNHKARQRQKQKQDH-------TATLAYFNHFL-------PLPPFAPHFPSPN 123

Query: 122 NVVCSPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLS 181
            VVCSPYYVHQN VG+YP  Q+NS          +RS SERR+C          NN    
Sbjct: 124 -VVCSPYYVHQNNVGVYPHQQSNSTT--------RRSNSERRSCT---------NNPGFG 183

Query: 182 YQT-------TETLSLFPTHPTGDLQAGPQSP---PPPTLTTVSASASDGISDDDSAGGR 239
           YQ+       T+TL LFPTHPTGDLQ GP  P   PP  + + SAS+S G+S D+S+GG 
Sbjct: 184 YQSCQTDNPATQTLPLFPTHPTGDLQVGPPPPSPLPPQAMASASASSSSGMSADESSGGC 213

[Close]

BLAST of IVF0023946 vs. NCBI nr
Match: KAG7036919.1 (WUSCHEL-related homeobox 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235 bits (599), Expect = 1.33e-74
Identity = 141/239 (59.00%), Postives = 161/239 (67.36%), Query Frame = 0


Query: 2   TAEMGGGGGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEG 61
           TAE+      GG PVSSRWNPTKEQISILENLY QGVRTPSA+QIQQIT RLK YGHIEG
Sbjct: 4   TAEI------GGTPVSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEG 63

Query: 62  KNVFYWFQNHKARQRQKQKQQHHHHHHHFNSSFPFYNHFLHFNHTNSPFPPPPPPPPPPN 121
           KNVFYWFQNHKARQRQKQKQ H       +++  ++NHFL       P PP  P  P PN
Sbjct: 64  KNVFYWFQNHKARQRQKQKQDH-------SATLAYFNHFL-------PLPPFAPHFPSPN 123

Query: 122 NVVCSPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLS 181
            VVCSPYYVHQN VG+YP  Q+NS +              RR+       +S  N+N   
Sbjct: 124 -VVCSPYYVHQNNVGVYPQQQSNSKM--------------RRSHNGGFGYQSCQNDN--- 183

Query: 182 YQTTETLSLFPTHPTGDLQAGPQ-SPPPPTLTTVSASASDGISDDDSAGGRQPYFEFFM 239
             TT+TLSLFPTHPTGDLQAGP  SPP     T +ASAS G+S D+S+GG + YFEFF+
Sbjct: 184 -PTTQTLSLFPTHPTGDLQAGPPPSPPHAEAATATASASSGMSADESSGGCRTYFEFFL 203

[Close]

BLAST of IVF0023946 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-30
Identity = 104/262 (39.69%), Postives = 139/262 (53.05%), Query Frame = 0


Query: 13  GPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHK 72
           G   SSRWNPTK+QI++LENLY++G+RTPSADQIQQIT RL+ YGHIEGKNVFYWFQNHK
Sbjct: 8   GTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHK 67

Query: 73  ARQRQKQKQQHHHHHHHFNSSFPFYNHFLHFNHTNSPFPPPPPPPPPPNNVVC-SPYYV- 132
           ARQRQKQKQ+             ++N  LH   T+  F      PPP +NV C SPYY+ 
Sbjct: 68  ARQRQKQKQER----------MAYFNRLLH--KTSRFF-----YPPPCSNVGCVSPYYLQ 127

Query: 133 -----HQNEVG-LYPP---YQNNSMVIQSSGIVKKRSKSERRNCIININ----------- 192
                H N+ G +Y     ++NN M+   SG  +KR+ ++ +  + +I            
Sbjct: 128 QASDHHMNQHGSVYTNDLLHRNNVMI--PSGGYEKRTVTQHQKQLSDIRTTAATRMPISP 187

Query: 193 -----EESTINNN-------NLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASA 239
                +   + +N       N++    +TL LFP  P     A          ++  A  
Sbjct: 188 SSLRFDRFALRDNCYAGEDINVNSSGRKTLPLFPLQPLNASNADGMG------SSSFALG 244

[Close]

BLAST of IVF0023946 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 103.2 bits (256), Expect = 2.9e-22
Identity = 47/69 (68.12%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 15  PVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKAR 74
           P  +RWNPT+EQI ILE LY+ G+RTP+A QI+ IT++L  YG IEGKNVFYWFQNHKAR
Sbjct: 86  PGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKAR 145

Query: 75  QRQKQKQQH 84
           +RQKQK+ +
Sbjct: 146 ERQKQKRNN 154

[Close]

BLAST of IVF0023946 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 9.4e-21
Identity = 43/64 (67.19%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 19  RWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKARQRQK 78
           RWNPT EQI+ LE LYR G RTP+ +QIQQI  +L+ YG IEGKNVFYWFQNHKAR+R K
Sbjct: 61  RWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLK 120

Query: 79  QKQQ 83
           ++++
Sbjct: 121 RRRR 124

[Close]

BLAST of IVF0023946 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 2.7e-20
Identity = 50/79 (63.29%), Postives = 55/79 (69.62%), Query Frame = 0


Query: 14 PPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKA 73
          P  S+RW PT EQ+ ILE +YR G+RTP+A QIQQIT  L  YG IEGKNVFYWFQNHKA
Sbjct: 3  PVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKA 62

Query: 74 RQRQK-----QKQQHHHHH 88
          R RQK      KQ H   H
Sbjct: 63 RDRQKLRKKLAKQLHQQQH 81

[Close]

BLAST of IVF0023946 vs. TAIR 10
Match: AT5G05770.1 (WUSCHEL related homeobox 7 )

HSP 1 Score: 96.7 bits (239), Expect = 2.7e-20
Identity = 44/70 (62.86%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 9  GGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWF 68
          GGGG      RWNPT EQ+ +L +L++ G+RTPS DQIQ+I++ L  YG IE KNVFYWF
Sbjct: 19 GGGGTGAKCGRWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWF 78

Query: 69 QNHKARQRQK 79
          QNHKAR+RQK
Sbjct: 79 QNHKARERQK 88

The following BLAST results are available for this feature:

BLAST of IVF0023946 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6X7K1	2.4e-29	39.69	WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1	[more]
A2WWU7	1.4e-24	36.57	WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 S...	[more]
Q8LR86	1.4e-24	36.57	WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2...	[more]
A2XZR3	1.7e-19	53.54	Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WO...	[more]
Q6X7K0	5.0e-19	53.91	WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2	[more]

BLAST of IVF0023946 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVA9	1.8e-112	88.52	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G505930 PE...	[more]
A0A6J1E0T1	1.9e-61	61.40	WUSCHEL-related homeobox 2 OS=Momordica charantia OX=3673 GN=LOC111025366 PE=3 S...	[more]
A0A6J1KD41	3.0e-59	58.82	WUSCHEL-related homeobox 2-like OS=Cucurbita maxima OX=3661 GN=LOC111493249 PE=3...	[more]
M1CZ36	4.0e-43	53.37	WOX2 OS=Solanum tuberosum OX=4113 GN=102585727 PE=3 SV=1	[more]
A0A1Q3AQ94	1.2e-42	46.18	Homeobox domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3...	[more]

BLAST of IVF0023946 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65708.1	2.47e-146	88.52	hypothetical protein Csa_019930 [Cucumis sativus]	[more]
XP_031742465.1	2.16e-94	65.16	WUSCHEL-related homeobox 2 [Cucumis sativus]	[more]
XP_022158904.1	3.80e-80	61.40	WUSCHEL-related homeobox 2 [Momordica charantia]	[more]
XP_022998665.1	3.44e-77	57.66	WUSCHEL-related homeobox 2-like [Cucurbita maxima]	[more]
KAG7036919.1	1.33e-74	59.00	WUSCHEL-related homeobox 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of IVF0023946 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59340.1	1.7e-30	39.69	WUSCHEL related homeobox 2	[more]
AT1G46480.1	2.9e-22	68.12	WUSCHEL related homeobox 4	[more]
AT2G01500.1	9.4e-21	67.19	Homeodomain-like superfamily protein	[more]
AT2G28610.1	2.7e-20	63.29	Homeodomain-like superfamily protein	[more]
AT5G05770.1	2.7e-20	62.86	WUSCHEL related homeobox 7	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 15..82 e-value: 1.8E-4 score: 30.9
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 18..77 e-value: 6.0E-19 score: 67.6
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 13..78 score: 10.640736
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 19..73 e-value: 2.09254E-5 score: 39.1489
None	No IPR available	GENE3D	1.10.10.60		coord: 17..90 e-value: 5.3E-11 score: 44.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR45940:SF6	TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED	coord: 6..238
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 6..238
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 16..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023946.2	IVF0023946.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity