IVF0023911 (gene) Melon (IVF77) v1

Overview
NameIVF0023911
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr09: 4912963 .. 4913145 (+)
RNA-Seq ExpressionIVF0023911
SyntenyIVF0023911
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAAAGCTCGATCGCCCCCAGTAGAAATTGGATCGCTAACAGCGAAGCAAAATGAAGATACTCGATCGTTTCTACTAGGAGTTAGATCCGACGGTAAAAACCCGATCGCCCCTAGTAGAAATCTGATTGCTCACGATGAAGCAAAACGAAGATACCCGATGGTTCCTACTAAGAGTTAG

mRNA sequence

ATGGTAAAAGCTCGATCGCCCCCAGTAGAAATTGGATCGCTAACAGCGAAGCAAAATGAAGATACTCGATCGTTTCTACTAGGAGTTAGATCCGACGGTAAAAACCCGATCGCCCCTAGTAGAAATCTGATTGCTCACGATGAAGCAAAACGAAGATACCCGATGGTTCCTACTAAGAGTTAG

Coding sequence (CDS)

ATGGTAAAAGCTCGATCGCCCCCAGTAGAAATTGGATCGCTAACAGCGAAGCAAAATGAAGATACTCGATCGTTTCTACTAGGAGTTAGATCCGACGGTAAAAACCCGATCGCCCCTAGTAGAAATCTGATTGCTCACGATGAAGCAAAACGAAGATACCCGATGGTTCCTACTAAGAGTTAG

Protein sequence

MVKARSPPVEIGSLTAKQNEDTRSFLLGVRSDGKNPIAPSRNLIAHDEAKRRYPMVPTKS
Homology
BLAST of IVF0023911 vs. ExPASy TrEMBL
Match: A0A5A7UI85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00110 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.7e-07
Identity = 33/48 (68.75%), Postives = 36/48 (75.00%), Query Frame = 0

Query: 3   KARSPPVEIGSLTAKQNEDTRSFLLGVRSDGKNPIAPSRNLIAHDEAK 51
           K RS PVEIGS TAKQNED +S LLGV  DGK+ IAPSRN I   EA+
Sbjct: 118 KVRSLPVEIGSQTAKQNEDAQSLLLGVGFDGKSSIAPSRNQITDGEAE 165

BLAST of IVF0023911 vs. NCBI nr
Match: KAA0055593.1 (uncharacterized protein E6C27_scaffold222G00750 [Cucumis melo var. makuwa] >TYK01332.1 uncharacterized protein E5676_scaffold29G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 1.38e-10
Identity = 33/48 (68.75%), Postives = 36/48 (75.00%), Query Frame = 0

Query: 3   KARSPPVEIGSLTAKQNEDTRSFLLGVRSDGKNPIAPSRNLIAHDEAK 50
           K RS PVEIGS TAKQNED +S LLGV  DGK+ IAPSRN I   EA+
Sbjct: 118 KVRSLPVEIGSQTAKQNEDAQSLLLGVGFDGKSSIAPSRNQITDGEAE 165

BLAST of IVF0023911 vs. NCBI nr
Match: KAA0065775.1 (hypothetical protein E6C27_scaffold37G00680 [Cucumis melo var. makuwa] >TYJ96515.1 hypothetical protein E5676_scaffold546G001640 [Cucumis melo var. makuwa])

HSP 1 Score: 49.7 bits (117), Expect = 1.89e-05
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 0

Query: 9  VEIGSLTAKQNEDTRSFLLGVRSDGKNPIAPSRNLIA 45
          VEIGSLTAKQNED RSFL GV  D K+ I+ +RN IA
Sbjct: 58 VEIGSLTAKQNEDIRSFLPGVGFDDKSSISHNRNQIA 94

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UI855.7e-0768.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0055593.11.38e-1068.75uncharacterized protein E6C27_scaffold222G00750 [Cucumis melo var. makuwa] >TYK0... [more]
KAA0065775.11.89e-0570.27hypothetical protein E6C27_scaffold37G00680 [Cucumis melo var. makuwa] >TYJ96515... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0023911.1IVF0023911.1mRNA