IVF0023795 (gene) Melon (IVF77) v1

Overview
NameIVF0023795
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUPF0161 protein At3g09310
Locationchr08: 28945982 .. 28948429 (-)
RNA-Seq ExpressionIVF0023795
SyntenyIVF0023795
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTGTTTTTCTGTGTTCCCATTGTTCATACGTAATCAACAAACTATTACAAAACCGAAGATGATATCATAGTAAACACTAGTGTAAAATTACGGAGAACAATCCAATTATATTATGATTCAGTTCCCATTAGTATTCTTCATCGAAAATCCATGACCTAAAGTAAATATCTTTTTTTTTTAAGAAAAAAAAGTTGAACTTCATTTGCGTTGGCAGTAACTGTAAGAGCAGATTGACATGGCGGTTCTTCCCACCACAAACTGCAACACACCCCAAAACCTGAACCCAATCTTCTTCACCGGCCGCTGCCATCAACGGCCCTTCTTTGCCGCCGGCTTCAGTATTCGTTTTAATTGCCGGAAGCTCCGTCGCCCGTTAATCCTAAGCGAAACGCGCGCCACATCGAAGTCAAGCGCGAACAGCGACCAAGGTACTTGCCTCTTCACTCCATATGTTTGTATAAATTTCGGTGAATAAGGGCATTTTAATCGTTTTCACAGATGGCGAAGTGGACAATTTGGGGGTTAAAGCTGCACTGTCCATGCTTAAATTCTACAAACGTAAGTAGAACGATGATGTTTATTCTGTTTTAAGATTCTAATTCGAAGAATTTCAGAATTCGATCGATTGAAGATAACACATACCGTTGAGTTCTTACTTGAATAAATGGGAGCAGGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCTACATGTAGTGAGTATTCGATGCAAGCTTACAAGAAATACGGTGTTGCCAAGGGTACCGTCTTGACTGCTTGGCGTCTCTGTCGCTGCAATCCCCTTGGTAATGCTCTCATTCAAAAGGAACCTATAAGATGAGTCATAATCATCTTCTTGAACCTTCAGGAAGGGGATTTGTCCGTGTTTATGTTATTTGGTTTTTGATTCTGTAAAATACTGATTTTAGGCCATTGCTGCCTTGTAGGTGGATCTGGGTTTGATCCTCCTCGGTGGTTTGATGAAGAAAGATTGCCAGAACCAGAAGATTGACAATTTCAAATGCTTTGTTAGTATATGATACGGACTAAGAATATAAGTTTACTTCGATGAGTTTTTCAGTTTTCTTTCCTGATATTGCATTCTTAGGAGAAGGGTAATGTAAAGTTGCTGCATCCATAGTAATGGTTTTGATTGAAATGGTTAAAATCACTTTTATCATGTTTTTAATTATTTAAACGATTTGATGTATGATTTTACACTTTTCTAACACGTTTTTCTTTGAACCAACAATGCTTCTGATTGATTAAAGAACAAAAAAATGTTTTGAATGATTAAAAGAGCAATTTTGAGCATTTTTGTAATGATTTCTAACCATTTCAAAATTGGTTCTACTCGTGAACGTAATTTTGATGATGACCAATTGGGGAGGTGGGGACTTGCTGGAGGATTATTAGTTTGGTTGTGAAAATGGTGAAAGCTTTCCATTGAAATTGAATATTGAATATTTCAGGTGTTAAAATAGAACCACTTTCTCCTGATAACTCTGTATTTAGGCTCACTAGACCTTTAACAGTTGATTAATGAAAAGCATGCACAAGCTTTCCCATCTTCAGATGACATATGTTAGACAGTTCTGTGGAAGCTAGTCCAATTGTTCTTTGACAAACTTAAAACTATGTATTATATACTAATTTATCATTCAGATGCAAAAAGGTTATGATTGGTAATCCTTCCATAATCAATTTGATTGATGGAATCTTGAAGGACATTTTGTATTATTACTGATATCAAATGTTCATTATGATGATGTCGACTTCCTTGGTGATTATATGAAAGGAAGATATCTTCCCATGCCTTTGTGCTTTTTTGTTGGGCTATTACACCGCCACTAGACTTAGTGAGATCAAATAGTTCAAGTTATTTGGGGCCAGCTTAAATTAAATTAACTTTCTAGGAAAAAGTTGATAAAGTACCTGAAAAGTCAATCTAAATAATCCCTTCTTGTTTATGGTTTTAATATATTTCTAATACCTTCACTCACACATAGATATTAGAATTATAGACATAGGCACATAAAATTGAAGCGATGCCTAATCACTCTTGGATTGAACGTTTGAGCTATTGAGTGATGAATCCATATTTTCTTTTCTCATCATTTCTGCCATTGTGAGAGGAAGTTTTGTGTTATGTAATTTATGTTAATTTAGTTCAGTTCTTTTGCTGGGGTTTGAAGGTTCTTTCAATCTCATCACCCAGATTTCTATGCAGGTTGTGTTGGCTAATGTGTTGGTTGATTGTTGGGGGTGAATTTGTGAGAGCTAACTCCCTGTGCAGAGCGAAGAATGTTGTAGAAATTAGCATGTTACACGAATATTTTTGTAACTGGAGTTGTGAATGTGGAACTTGTTCTGAGAATATAACATAATATATGTTAGATTACAATTGTGCTACGTTGACTTTAGCTTATACCGATCA

mRNA sequence

ATTTGTTTTTCTGTGTTCCCATTGTTCATACGTAATCAACAAACTATTACAAAACCGAAGATGATATCATAGTAAACACTAGTGTAAAATTACGGAGAACAATCCAATTATATTATGATTCAGTTCCCATTAGTATTCTTCATCGAAAATCCATGACCTAAAGTAAATATCTTTTTTTTTTAAGAAAAAAAAGTTGAACTTCATTTGCGTTGGCAGTAACTGTAAGAGCAGATTGACATGGCGGTTCTTCCCACCACAAACTGCAACACACCCCAAAACCTGAACCCAATCTTCTTCACCGGCCGCTGCCATCAACGGCCCTTCTTTGCCGCCGGCTTCAGTATTCGTTTTAATTGCCGGAAGCTCCGTCGCCCGTTAATCCTAAGCGAAACGCGCGCCACATCGAAGTCAAGCGCGAACAGCGACCAAGATGGCGAAGTGGACAATTTGGGGGTTAAAGCTGCACTGTCCATGCTTAAATTCTACAAACGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCTACATGTAGTGAGTATTCGATGCAAGCTTACAAGAAATACGGTGTTGCCAAGGGTACCGTCTTGACTGCTTGGCGTCTCTGTCGCTGCAATCCCCTTGGTGGATCTGGGTTTGATCCTCCTCGGTGGTTTGATGAAGAAAGATTGCCAGAACCAGAAGATTGACAATTTCAAATGCTTTGTTGTGTTGGCTAATGTGTTGGTTGATTGTTGGGGGTGAATTTGTGAGAGCTAACTCCCTGTGCAGAGCGAAGAATGTTGTAGAAATTAGCATGTTACACGAATATTTTTGTAACTGGAGTTGTGAATGTGGAACTTGTTCTGAGAATATAACATAATATATGTTAGATTACAATTGTGCTACGTTGACTTTAGCTTATACCGATCA

Coding sequence (CDS)

ATGGCGGTTCTTCCCACCACAAACTGCAACACACCCCAAAACCTGAACCCAATCTTCTTCACCGGCCGCTGCCATCAACGGCCCTTCTTTGCCGCCGGCTTCAGTATTCGTTTTAATTGCCGGAAGCTCCGTCGCCCGTTAATCCTAAGCGAAACGCGCGCCACATCGAAGTCAAGCGCGAACAGCGACCAAGATGGCGAAGTGGACAATTTGGGGGTTAAAGCTGCACTGTCCATGCTTAAATTCTACAAACGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCTACATGTAGTGAGTATTCGATGCAAGCTTACAAGAAATACGGTGTTGCCAAGGGTACCGTCTTGACTGCTTGGCGTCTCTGTCGCTGCAATCCCCTTGGTGGATCTGGGTTTGATCCTCCTCGGTGGTTTGATGAAGAAAGATTGCCAGAACCAGAAGATTGA

Protein sequence

MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVLTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Homology
[Close]
BLAST of IVF0023795 vs. ExPASy Swiss-Prot
Match: Q9SR32 (UPF0161 protein At3g09310 OS=Arabidopsis thaliana OX=3702 GN=At3g09310 PE=2 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-37
Identity = 73/97 (75.26%), Postives = 82/97 (84.54%), Query Frame = 0 

Query: 49  LSETRATSKSSANSDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQ 108
           LS     SK    S QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+
Sbjct: 50  LSAKSTPSKPDPASPQDGEELESVGVKAALAMLRFYKREISPVLPRSCRYVPTCSEYSME 109

Query: 109 AYKKYGVAKGTVLTAWRLCRCNPLGGSGFDPPRWFDE 145
           AYKKYGV KGTVLT WRLCRCNPLGGSGFDPPRWF E
Sbjct: 110 AYKKYGVLKGTVLTTWRLCRCNPLGGSGFDPPRWFGE 146

[Close]
BLAST of IVF0023795 vs. ExPASy Swiss-Prot
Match: Q2S3T2 (Putative membrane protein insertion efficiency factor OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=SRU_1017 PE=3 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 2.7e-18
Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 0 

Query: 77  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVLTAWRLCRCNPLGGSGF 136
           + +++ Y+  +SP L  +CR+ PTCS Y++QA+++YG  KG VLT  RL RC+P GG G+
Sbjct: 17  IGLVRLYQLVLSPHLGRTCRFHPTCSAYAIQAFREYGALKGLVLTVHRLLRCHPWGGHGY 76

Query: 137 DPPRWFDEE 146
           DPPRWFDEE
Sbjct: 77  DPPRWFDEE 85

[Close]
BLAST of IVF0023795 vs. ExPASy Swiss-Prot
Match: B0T0Z8 (Putative membrane protein insertion efficiency factor OS=Caulobacter sp. (strain K31) OX=366602 GN=Caul_4526 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-16
Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 0 

Query: 80  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVLTAWRLCRCNPLGGSGFDPP 139
           LK YK  +SP +   CRYLPTCSEY+ QA K +G  KG+ L   R+CRCNPLGGSG+DPP
Sbjct: 12  LKAYKTTLSPFIGRQCRYLPTCSEYAAQALKDHGPLKGSWLAVGRICRCNPLGGSGYDPP 71

[Close]
BLAST of IVF0023795 vs. ExPASy Swiss-Prot
Match: Q11SD8 (Putative membrane protein insertion efficiency factor OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=CHU_2420 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.7e-16
Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 0 

Query: 80  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVLTAWRLCRCNPLGGSGFDP 139
           +K Y+  ISPLLP +CRY PTCSEY +QA +KYG  KG  L   R+C CNP GGSG+DP
Sbjct: 19  VKIYQYSISPLLPGACRYTPTCSEYCVQAIEKYGPLKGIWLGTKRICSCNPWGGSGYDP 77

[Close]
BLAST of IVF0023795 vs. ExPASy Swiss-Prot
Match: B0K8I2 (Putative membrane protein insertion efficiency factor OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=Teth39_2293 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-15
Identity = 31/60 (51.67%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 79  MLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVLTAWRLCRCNPLGGSGFDP 138
           ++K Y+R ISP+ P SCR+ PTCS+YS++A  KYG+ KG +++ WR+ RCNP    G+DP
Sbjct: 8   LIKLYQRYISPMKPRSCRFYPTCSQYSIEAISKYGLLKGGIMSIWRILRCNPFNPGGYDP 67

[Close]
BLAST of IVF0023795 vs. ExPASy TrEMBL
Match: A0A1S3BJN3 (UPF0161 protein At3g09310 OS=Cucumis melo OX=3656 GN=LOC103490314 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 7.8e-85
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60
           MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]
BLAST of IVF0023795 vs. ExPASy TrEMBL
Match: A0A5A7STY4 (UPF0161 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00430 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 7.3e-83
Identity = 152/158 (96.20%), Postives = 152/158 (96.20%), Query Frame = 0 

Query: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60
           MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPL------GGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPL      GGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGHCCLVGGSGFDPPRWFDEERLPEPED 158

[Close]
BLAST of IVF0023795 vs. ExPASy TrEMBL
Match: A0A0A0KXI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296120 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.9e-79
Identity = 144/152 (94.74%), Postives = 146/152 (96.05%), Query Frame = 0 

Query: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60
           MAVLPTTNC+T QNLNPIFF GRCHQRP  AAGFSIRFNCRKLRR LILSETRATS SSA
Sbjct: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]
BLAST of IVF0023795 vs. ExPASy TrEMBL
Match: A0A6J1EUS1 (UPF0161 protein At3g09310 OS=Cucurbita moschata OX=3662 GN=LOC111438132 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.9e-71
Identity = 133/152 (87.50%), Postives = 138/152 (90.79%), Query Frame = 0 

Query: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60
           MAVLPTTNC+  QN NPIFF G C +    AA FSIRFN +KLRRPLI+SETRATS SSA
Sbjct: 1   MAVLPTTNCHKLQNQNPIFFAGGCQKSHRSAAAFSIRFNGQKLRRPLIISETRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120
           N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]
BLAST of IVF0023795 vs. ExPASy TrEMBL
Match: A0A6J1HNH0 (UPF0161 protein At3g09310 OS=Cucurbita maxima OX=3661 GN=LOC111465896 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 131/152 (86.18%), Postives = 136/152 (89.47%), Query Frame = 0 

Query: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60
           MAVLPTTNC+  Q   PIFF G C Q    AA FSIRFN +KLRRPLI+SETRATS SSA
Sbjct: 1   MAVLPTTNCHKLQ--KPIFFAGGCQQTHRSAAAFSIRFNGQKLRRPLIISETRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120
           N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRY+PTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NEDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYVPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 150

[Close]
BLAST of IVF0023795 vs. NCBI nr
Match: XP_008448003.1 (PREDICTED: UPF0161 protein At3g09310 [Cucumis melo] >XP_008448011.1 PREDICTED: UPF0161 protein At3g09310 [Cucumis melo])

HSP 1 Score: 323 bits (829), Expect = 7.44e-112
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60
           MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]
BLAST of IVF0023795 vs. NCBI nr
Match: KAA0032659.1 (UPF0161 protein [Cucumis melo var. makuwa] >TYK23539.1 UPF0161 protein [Cucumis melo var. makuwa])

HSP 1 Score: 317 bits (812), Expect = 3.59e-109
Identity = 152/158 (96.20%), Postives = 152/158 (96.20%), Query Frame = 0 

Query: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60
           MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPLG------GSGFDPPRWFDEERLPEPED 152
           TAWRLCRCNPLG      GSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGHCCLVGGSGFDPPRWFDEERLPEPED 158

[Close]
BLAST of IVF0023795 vs. NCBI nr
Match: XP_004142065.1 (UPF0161 protein At3g09310 isoform X1 [Cucumis sativus] >XP_011653638.1 UPF0161 protein At3g09310 isoform X1 [Cucumis sativus])

HSP 1 Score: 305 bits (781), Expect = 1.56e-104
Identity = 144/152 (94.74%), Postives = 146/152 (96.05%), Query Frame = 0 

Query: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60
           MAVLPTTNC+T QNLNPIFF GRCHQRP  AAGFSIRFNCRKLRR LILSETRATS SSA
Sbjct: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]
BLAST of IVF0023795 vs. NCBI nr
Match: XP_038882937.1 (UPF0161 protein At3g09310 isoform X3 [Benincasa hispida])

HSP 1 Score: 283 bits (725), Expect = 5.42e-96
Identity = 134/152 (88.16%), Postives = 140/152 (92.11%), Query Frame = 0 

Query: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60
           MAVL TTNC+  QN NP FF GRCHQRPF AA FSI++N R LRRPLILS+TRATS SS+
Sbjct: 1   MAVLSTTNCHKLQNQNPSFFAGRCHQRPFSAADFSIQYNRRNLRRPLILSKTRATSNSSS 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152
           TAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEESLPEPED 152

[Close]
BLAST of IVF0023795 vs. NCBI nr
Match: XP_023518310.1 (UPF0161 protein At3g09310 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279 bits (713), Expect = 3.66e-94
Identity = 133/152 (87.50%), Postives = 138/152 (90.79%), Query Frame = 0 

Query: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60
           MAVLPTTNC+  QN NPIFF GRCHQ    AA FSIRFN +KLRRPLI+SE+RATS SSA
Sbjct: 1   MAVLPTTNCHKLQNQNPIFFAGRCHQSRRSAAAFSIRFNGQKLRRPLIISESRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120
           N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NRDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152
           TAWRLCRCNP G SGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPFGVSGFDPPRWFDEERLPEPED 152

[Close]
BLAST of IVF0023795 vs. TAIR 10
Match: AT3G09310.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF37 (InterPro:IPR002696); Has 5781 Blast hits to 5781 proteins in 1903 species: Archae - 0; Bacteria - 3956; Metazoa - 2; Fungi - 0; Plants - 42; Viruses - 3; Other Eukaryotes - 1778 (source: NCBI BLink). )

HSP 1 Score: 157.5 bits (397), Expect = 8.3e-39
Identity = 73/97 (75.26%), Postives = 82/97 (84.54%), Query Frame = 0 

Query: 49  LSETRATSKSSANSDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQ 108
           LS     SK    S QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+
Sbjct: 50  LSAKSTPSKPDPASPQDGEELESVGVKAALAMLRFYKREISPVLPRSCRYVPTCSEYSME 109

Query: 109 AYKKYGVAKGTVLTAWRLCRCNPLGGSGFDPPRWFDE 145
           AYKKYGV KGTVLT WRLCRCNPLGGSGFDPPRWF E
Sbjct: 110 AYKKYGVLKGTVLTTWRLCRCNPLGGSGFDPPRWFGE 146

The following BLAST results are available for this feature:
BLAST of IVF0023795 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SR321.2e-3775.26UPF0161 protein At3g09310 OS=Arabidopsis thaliana OX=3702 GN=At3g09310 PE=2 SV=2[more]
Q2S3T22.7e-1853.62Putative membrane protein insertion efficiency factor OS=Salinibacter ruber (str... [more]
B0T0Z81.1e-1661.67Putative membrane protein insertion efficiency factor OS=Caulobacter sp. (strain... [more]
Q11SD89.7e-1661.02Putative membrane protein insertion efficiency factor OS=Cytophaga hutchinsonii ... [more]
B0K8I21.3e-1551.67Putative membrane protein insertion efficiency factor OS=Thermoanaerobacter pseu... [more]
BLAST of IVF0023795 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BJN37.8e-85100.00UPF0161 protein At3g09310 OS=Cucumis melo OX=3656 GN=LOC103490314 PE=3 SV=1[more]
A0A5A7STY47.3e-8396.20UPF0161 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G0043... [more]
A0A0A0KXI42.9e-7994.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296120 PE=3 SV=1[more]
A0A6J1EUS12.9e-7187.50UPF0161 protein At3g09310 OS=Cucurbita moschata OX=3662 GN=LOC111438132 PE=3 SV=... [more]
A0A6J1HNH01.0e-6886.18UPF0161 protein At3g09310 OS=Cucurbita maxima OX=3661 GN=LOC111465896 PE=3 SV=1[more]
BLAST of IVF0023795 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008448003.17.44e-112100.00PREDICTED: UPF0161 protein At3g09310 [Cucumis melo] >XP_008448011.1 PREDICTED: U... [more]
KAA0032659.13.59e-10996.20UPF0161 protein [Cucumis melo var. makuwa] >TYK23539.1 UPF0161 protein [Cucumis ... [more]
XP_004142065.11.56e-10494.74UPF0161 protein At3g09310 isoform X1 [Cucumis sativus] >XP_011653638.1 UPF0161 p... [more]
XP_038882937.15.42e-9688.16UPF0161 protein At3g09310 isoform X3 [Benincasa hispida][more]
XP_023518310.13.66e-9487.50UPF0161 protein At3g09310 [Cucurbita pepo subsp. pepo][more]
BLAST of IVF0023795 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G09310.18.3e-3975.26unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF37 (... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002696Putative membrane protein insertion efficiency factorSMARTSM01234Haemolytic_2coord: 72..139
e-value: 6.3E-35
score: 132.0
IPR002696Putative membrane protein insertion efficiency factorTIGRFAMTIGR00278TIGR00278coord: 78..139
e-value: 6.9E-21
score: 71.9
IPR002696Putative membrane protein insertion efficiency factorPFAMPF01809YidDcoord: 75..138
e-value: 8.9E-26
score: 89.6
IPR002696Putative membrane protein insertion efficiency factorPANTHERPTHR33383MEMBRANE PROTEIN INSERTION EFFICIENCY FACTOR-RELATEDcoord: 33..148
IPR002696Putative membrane protein insertion efficiency factorHAMAPMF_00386UPF0161_YidDcoord: 72..140
score: 20.660767

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0023795.3IVF0023795.3mRNA