IVF0023601 (gene) Melon (IVF77) v1

Overview


Name	IVF0023601
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	CASP-like protein
Location	chr12: 25641765 .. 25642593 (+)
RNA-Seq Expression	IVF0023601
Synteny	IVF0023601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCTAAGGTATTACCGTTGATTGGTATTGGAATTAGAATCTTCGTCTTCATATGTCTCCTCATCGCCTTGGTCGTAATTGCCACTGACAAATTGTCCCTCATTAATGGCTTCAAAGCAACCTTCAATGATGTCCATGGATACAGGTTCTTCTCTACTCTGCTCTGCCCATCAATTTCATTTATACATTCACAATCAATACAAATTTACTACAAGAAATTATGCTTTGCTCATACTGTTTCTTGCAATGCAGGTACGTGTTGTCTGTTGCAACTATAGGATTAGCCCATACAATTTTACAACTGGGTTTCTCCATATACCATGTGCTTACCCAAAACATACTCTTTTGGAATGGGCTTCCACAAGTCAACTACTACGCTGACCAGGTTGGTGACTTAGACAAATTATTATTGAGATTTTAAGAAAACTTTGGGCTTACGAGTGAATCAAATACATTATGGATATGCAGGTCATAACTTGGGTGTTGGCCACGGCGGTTGGAGCTGGCTTTGCGGTCTCCGGAGAGCTGAAAAGTTATGTGAATTCAAGAATTAATAAGGAATTTGGGGATTATTATGGGTTCTTCAGTGCACAAGTTGATGAGCAGAAGTCACTGATAGATGATTTCTTCGATAAGGCCAATATTGCCACTGCCATTCTCTTCCTTGCTTTCATCTCCATGGCCACTCTCCTCCTTCTCTCTCCCTTCAATCGGATCAAACCAACTCCTCTTCCCACACAAGATCCCGAGGCCCAAAAGCTTGAGGCCCAATCTTCCCAAGCCCAGCAGACGGAAGCCCAATCATCGGAGCCGCCTTCTCGTTGA

mRNA sequence

ATGGATCCTAAGGTATTACCGTTGATTGGTATTGGAATTAGAATCTTCGTCTTCATATGTCTCCTCATCGCCTTGGTCGTAATTGCCACTGACAAATTGTCCCTCATTAATGGCTTCAAAGCAACCTTCAATGATGTCCATGGATACAGGTACGTGTTGTCTGTTGCAACTATAGGATTAGCCCATACAATTTTACAACTGGGTTTCTCCATATACCATGTGCTTACCCAAAACATACTCTTTTGGAATGGGCTTCCACAAGTCAACTACTACGCTGACCAGGTCATAACTTGGGTGTTGGCCACGGCGGTTGGAGCTGGCTTTGCGGTCTCCGGAGAGCTGAAAAGTTATGTGAATTCAAGAATTAATAAGGAATTTGGGGATTATTATGGGTTCTTCAGTGCACAAGTTGATGAGCAGAAGTCACTGATAGATGATTTCTTCGATAAGGCCAATATTGCCACTGCCATTCTCTTCCTTGCTTTCATCTCCATGGCCACTCTCCTCCTTCTCTCTCCCTTCAATCGGATCAAACCAACTCCTCTTCCCACACAAGATCCCGAGGCCCAAAAGCTTGAGGCCCAATCTTCCCAAGCCCAGCAGACGGAAGCCCAATCATCGGAGCCGCCTTCTCGTTGA

Coding sequence (CDS)

ATGGATCCTAAGGTATTACCGTTGATTGGTATTGGAATTAGAATCTTCGTCTTCATATGTCTCCTCATCGCCTTGGTCGTAATTGCCACTGACAAATTGTCCCTCATTAATGGCTTCAAAGCAACCTTCAATGATGTCCATGGATACAGGTACGTGTTGTCTGTTGCAACTATAGGATTAGCCCATACAATTTTACAACTGGGTTTCTCCATATACCATGTGCTTACCCAAAACATACTCTTTTGGAATGGGCTTCCACAAGTCAACTACTACGCTGACCAGGTCATAACTTGGGTGTTGGCCACGGCGGTTGGAGCTGGCTTTGCGGTCTCCGGAGAGCTGAAAAGTTATGTGAATTCAAGAATTAATAAGGAATTTGGGGATTATTATGGGTTCTTCAGTGCACAAGTTGATGAGCAGAAGTCACTGATAGATGATTTCTTCGATAAGGCCAATATTGCCACTGCCATTCTCTTCCTTGCTTTCATCTCCATGGCCACTCTCCTCCTTCTCTCTCCCTTCAATCGGATCAAACCAACTCCTCTTCCCACACAAGATCCCGAGGCCCAAAAGCTTGAGGCCCAATCTTCCCAAGCCCAGCAGACGGAAGCCCAATCATCGGAGCCGCCTTCTCGTTGA

Protein sequence

MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGLAHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNSRINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPTPLPTQDPEAQKLEAQSSQAQQTEAQSSEPPSR

Homology

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BLAST of IVF0023601 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-12
Identity = 50/166 (30.12%), Postives = 90/166 (54.22%), Query Frame = 0


Query: 13  IRIFVFICLLIALVVIATDKLSL---INGFKATFNDVHGYRYVLSVATIGLAHTILQLGF 72
           +RI  FI L+ +LV++ T+  +L   +   K  F DV+ YRY+L+   IGLA+T+LQ+ F
Sbjct: 17  LRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVIGLAYTVLQIAF 76

Query: 73  SIYHVLTQN-ILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNSRINKEFGD 132
           ++Y+V T N ++  +G    +++ D+VI+++L T   AGFA + ++K   +       GD
Sbjct: 77  TLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPVFSGS-----GD 136

Query: 133 YYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPF 175
           +               D F +K   + ++L + F+  A L + S +
Sbjct: 137 F---------------DAFINKGYASASLLLIGFVCTAVLSVFSSY 162

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BLAST of IVF0023601 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-12
Identity = 55/178 (30.90%), Postives = 96/178 (53.93%), Query Frame = 0


Query: 4   KVLPLIGIGIRIFVFICLLIALVVIATDKLSLI---NGFKATFNDVHGYRYVLSVATIGL 63
           KVL L+   +R+   + L+IAL++++T+ ++++   +  K  F DV+ YRY+LS A IGL
Sbjct: 14  KVLLLL---LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGL 73

Query: 64  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 123
            + ++QL F+I    T     +N   Q+++Y D++I++++AT   AGF V+ +LK     
Sbjct: 74  VYAVIQLFFTISEFATGVKNPFN--YQLDFYGDKLISYLVATGSAAGFGVTKDLKD---- 133

Query: 124 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIK 179
                      F +    +    +D FF K   + ++L  AFI +A L + S F   K
Sbjct: 134 ----------TFLALVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAK 172

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BLAST of IVF0023601 vs. ExPASy Swiss-Prot
Match: D7LD60 (CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903205 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.1e-12
Identity = 55/163 (33.74%), Postives = 86/163 (52.76%), Query Frame = 0


Query: 13  IRIFVFICLLIALVVIATDKLSL---INGFKATFNDVHGYRYVLSVATIGLAHTILQLGF 72
           +R+     L+I +V+I+T+ ++L       K  FNDV+ YRY+LS A IGL + ++QL  
Sbjct: 20  LRVLTAAFLVITVVLISTNTVTLEVSSTSIKMRFNDVYAYRYMLSAAVIGLLYAVVQLFL 79

Query: 73  SIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNSRINKEFGDY 132
           +I    T      N   Q N+Y D++I+++LAT   AGF VS +LK    + I  EF   
Sbjct: 80  TISQFATGTTHPLN--YQFNFYGDKIISYLLATGSAAGFGVSKDLKETFLALI--EF--- 139

Query: 133 YGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLS 173
                    +    +D FF K   + ++L  AF+S+A L + S
Sbjct: 140 ---------DSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFS 166

[Close]

BLAST of IVF0023601 vs. ExPASy Swiss-Prot
Match: D7LD59 (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.9e-12
Identity = 48/163 (29.45%), Postives = 89/163 (54.60%), Query Frame = 0


Query: 13  IRIFVFICLLIALVVIATDKLSLI---NGFKATFNDVHGYRYVLSVATIGLAHTILQLGF 72
           +R+   + L+IAL++++T+ ++++   +  K  F DV+ YRY+LS A IGL + ++QL F
Sbjct: 20  LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLLYAVIQLFF 79

Query: 73  SIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNSRINKEFGDY 132
           +I    T     +N   Q+++Y D++I++++AT   AGF VS +LK              
Sbjct: 80  TISEFATGMKNPFN--YQLDFYGDKLISYLVATGSAAGFGVSKDLKD------------- 139

Query: 133 YGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLS 173
             F +    +    +D FF +   + ++L  +FI +A L + S
Sbjct: 140 -AFIALVALDSTDPVDKFFSRGYASASLLLFSFICLAVLSVFS 166

[Close]

BLAST of IVF0023601 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.0e-12
Identity = 58/175 (33.14%), Postives = 91/175 (52.00%), Query Frame = 0


Query: 13  IRIFVFICLLIALVVIATDKLSL---INGFKATFNDVHGYRYVLSVATIGLAHTILQLGF 72
           +R+     LLI +V+I+T+ ++L       K  FNDV+ YRY+LS A IGL + ++QL  
Sbjct: 20  LRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLFL 79

Query: 73  SIYHVLTQNILFWNGLP-QVNYYADQVITWVLATAVGAGFAVSGELKSYVNSRINKEFGD 132
           +I    T      + L  Q ++Y D+VI+++LAT   AGF VS +LK    + I  EF  
Sbjct: 80  TISQFATGKT---HPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALI--EF-- 139

Query: 133 YYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPTPLP 184
                     +    +D FF K   + ++L  AF+S+A L + S    +   P+P
Sbjct: 140 ----------DSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSL-ALSKRPVP 176

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BLAST of IVF0023601 vs. ExPASy TrEMBL
Match: A0A5D3BGC2 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00320 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.1e-108
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60
           MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60

Query: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120
           AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS
Sbjct: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120

Query: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180
           RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT
Sbjct: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180

Query: 181 PLPTQDPEAQKLEAQSSQAQQTEAQSSEPPSR 213
           PLPTQDPEAQKLEAQSSQAQQTEAQSSEPPSR
Sbjct: 181 PLPTQDPEAQKLEAQSSQAQQTEAQSSEPPSR 212

[Close]

BLAST of IVF0023601 vs. ExPASy TrEMBL
Match: A0A1S3BYF7 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103494310 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.1e-108
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60
           MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60

Query: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120
           AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS
Sbjct: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120

Query: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180
           RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT
Sbjct: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180

Query: 181 PLPTQDPEAQKLEAQSSQAQQTEAQSSEPPSR 213
           PLPTQDPEAQKLEAQSSQAQQTEAQSSEPPSR
Sbjct: 181 PLPTQDPEAQKLEAQSSQAQQTEAQSSEPPSR 212

[Close]

BLAST of IVF0023601 vs. ExPASy TrEMBL
Match: A0A0A0LSG6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G029610 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.8e-93
Identity = 188/212 (88.68%), Postives = 196/212 (92.45%), Query Frame = 0


Query: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60
           MDPKVL LIGIG+RIFVFICLLIALVVIATDKLSLINGFKATFND+HGYRYVLSVA IGL
Sbjct: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60

Query: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120
           AHTILQLGFSIYHVLTQNI FWNGLPQVNYYADQVITW+LAT VGAGFAVS ELKSYV+S
Sbjct: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120

Query: 121 RINKEFGDY-YGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKP 180
           R  KEFGD  YGFFS  ++EQKSLIDDFF+KA +ATAILFLAFISMATLLLLSPFNRIKP
Sbjct: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180

Query: 181 TPLPTQDPEAQKLEAQSSQAQQTEAQSSEPPS 212
           TPLP QDPEAQK EAQSSQ Q TEAQSSEPPS
Sbjct: 181 TPLPAQDPEAQKSEAQSSQVQHTEAQSSEPPS 212

[Close]

BLAST of IVF0023601 vs. ExPASy TrEMBL
Match: A0A6J1C9J6 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111008706 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.1e-71
Identity = 148/193 (76.68%), Postives = 163/193 (84.46%), Query Frame = 0


Query: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60
           MDPKV+  I IG+R F FICLLIALVVIATDKL+LI+G+KATFND+HGYRYVLS+A IGL
Sbjct: 1   MDPKVVAFIVIGLRSFTFICLLIALVVIATDKLALIDGYKATFNDIHGYRYVLSIAIIGL 60

Query: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120
           AHTILQLGFS+YHVLTQNI FWNGLPQ NYYADQV+ WVLA+A GAGFAV+ ELK  V+ 
Sbjct: 61  AHTILQLGFSLYHVLTQNIPFWNGLPQFNYYADQVLAWVLASAAGAGFAVTAELKRLVDE 120

Query: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180
            I    GDY  F  A VD+Q+SLIDDFFDKANIATAILFLAF+SMATLLLLSPFNRIKP 
Sbjct: 121 NIKNAVGDYELFIPA-VDQQESLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPL 180

Query: 181 PLPTQDPEAQKLE 194
              TQDPEAQ  E
Sbjct: 181 ETTTQDPEAQAKE 192

[Close]

BLAST of IVF0023601 vs. ExPASy TrEMBL
Match: A0A6J1K769 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492902 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 8.9e-63
Identity = 138/212 (65.09%), Postives = 166/212 (78.30%), Query Frame = 0


Query: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60
           MD  V+  IGIG+RIF FICL IALVVIATDKL LI+G ++TFNDV GYRYVL+VA IGL
Sbjct: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDVQGYRYVLAVAIIGL 60

Query: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120
            HTILQLGFSIY+ +TQ + FW GLPQ NYYADQVI WVLA+A GAG AVS + K  +N 
Sbjct: 61  VHTILQLGFSIYYAVTQIVPFWKGLPQFNYYADQVINWVLASAAGAGLAVSADRKMLLNQ 120

Query: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180
            +  + GD    F+A +D+QK L++DFFD+ANIA+AILFLAF+S+ATLLLLSPFNRIKP 
Sbjct: 121 VVENDIGDCVVLFAA-LDQQKWLVNDFFDRANIASAILFLAFLSIATLLLLSPFNRIKPM 180

Query: 181 P----LPTQDPEAQKLEAQSSQAQQTEAQSSE 209
           P    L    P+AQK++AQS QAQ+ EAQS +
Sbjct: 181 PTTQDLEAHSPQAQKIQAQSPQAQKVEAQSPQ 211

[Close]

BLAST of IVF0023601 vs. NCBI nr
Match: XP_008454028.1 (PREDICTED: CASP-like protein 4D1 [Cucumis melo] >KAA0036037.1 CASP-like protein 4D1 [Cucumis melo var. makuwa] >TYJ98840.1 CASP-like protein 4D1 [Cucumis melo var. makuwa])

HSP 1 Score: 399 bits (1025), Expect = 9.28e-140
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60
           MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60

Query: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120
           AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS
Sbjct: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120

Query: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180
           RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT
Sbjct: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180

Query: 181 PLPTQDPEAQKLEAQSSQAQQTEAQSSEPPSR 212
           PLPTQDPEAQKLEAQSSQAQQTEAQSSEPPSR
Sbjct: 181 PLPTQDPEAQKLEAQSSQAQQTEAQSSEPPSR 212

[Close]

BLAST of IVF0023601 vs. NCBI nr
Match: XP_011649480.1 (CASP-like protein 4D2 [Cucumis sativus] >KGN63934.1 hypothetical protein Csa_014127 [Cucumis sativus])

HSP 1 Score: 350 bits (897), Expect = 3.10e-120
Identity = 188/212 (88.68%), Postives = 196/212 (92.45%), Query Frame = 0


Query: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60
           MDPKVL LIGIG+RIFVFICLLIALVVIATDKLSLINGFKATFND+HGYRYVLSVA IGL
Sbjct: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60

Query: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120
           AHTILQLGFSIYHVLTQNI FWNGLPQVNYYADQVITW+LAT VGAGFAVS ELKSYV+S
Sbjct: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120

Query: 121 RINKEFGDY-YGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKP 180
           R  KEFGD  YGFFS  ++EQKSLIDDFF+KA +ATAILFLAFISMATLLLLSPFNRIKP
Sbjct: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180

Query: 181 TPLPTQDPEAQKLEAQSSQAQQTEAQSSEPPS 211
           TPLP QDPEAQK EAQSSQ Q TEAQSSEPPS
Sbjct: 181 TPLPAQDPEAQKSEAQSSQVQHTEAQSSEPPS 212

[Close]

BLAST of IVF0023601 vs. NCBI nr
Match: XP_038894422.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 328 bits (842), Expect = 6.43e-112
Identity = 174/205 (84.88%), Postives = 188/205 (91.71%), Query Frame = 0


Query: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60
           MDPKV+ LIG+G+RIF+FICLLIALVVIATDKL+LI+GFKATFNDVHGYRY+LSVA IGL
Sbjct: 1   MDPKVVALIGVGLRIFIFICLLIALVVIATDKLALISGFKATFNDVHGYRYMLSVAIIGL 60

Query: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120
           AHTILQL FSIYH+LTQNI  WNGLPQ NYYADQVITWVLATA GAGFAVS ELKS+V+S
Sbjct: 61  AHTILQLSFSIYHLLTQNIPLWNGLPQFNYYADQVITWVLATAAGAGFAVSAELKSFVDS 120

Query: 121 R--INKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIK 180
              + KEFG+ YGFFS QVDEQKSLIDDFFDKANIATAILFLAF+SMATL+LLSPFNRIK
Sbjct: 121 HSTVEKEFGEDYGFFSPQVDEQKSLIDDFFDKANIATAILFLAFLSMATLILLSPFNRIK 180

Query: 181 PTPLPTQDPEAQKLEAQSSQAQQTE 203
           PTPLPTQD EAQKLEAQS QAQ TE
Sbjct: 181 PTPLPTQDLEAQKLEAQSPQAQSTE 205

[Close]

BLAST of IVF0023601 vs. NCBI nr
Match: XP_022137163.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 278 bits (710), Expect = 6.08e-92
Identity = 148/193 (76.68%), Postives = 163/193 (84.46%), Query Frame = 0


Query: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60
           MDPKV+  I IG+R F FICLLIALVVIATDKL+LI+G+KATFND+HGYRYVLS+A IGL
Sbjct: 1   MDPKVVAFIVIGLRSFTFICLLIALVVIATDKLALIDGYKATFNDIHGYRYVLSIAIIGL 60

Query: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120
           AHTILQLGFS+YHVLTQNI FWNGLPQ NYYADQV+ WVLA+A GAGFAV+ ELK  V+ 
Sbjct: 61  AHTILQLGFSLYHVLTQNIPFWNGLPQFNYYADQVLAWVLASAAGAGFAVTAELKRLVDE 120

Query: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180
            I    GDY  F  A VD+Q+SLIDDFFDKANIATAILFLAF+SMATLLLLSPFNRIKP 
Sbjct: 121 NIKNAVGDYELFIPA-VDQQESLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPL 180

Query: 181 PLPTQDPEAQKLE 193
              TQDPEAQ  E
Sbjct: 181 ETTTQDPEAQAKE 192

[Close]

BLAST of IVF0023601 vs. NCBI nr
Match: XP_022998177.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 249 bits (636), Expect = 2.43e-80
Identity = 140/211 (66.35%), Postives = 167/211 (79.15%), Query Frame = 0


Query: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60
           MD  V+  IGIG+RIF FICL IALVVIATDKL LI+G ++TFNDV GYRYVL+VA IGL
Sbjct: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDVQGYRYVLAVAIIGL 60

Query: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120
            HTILQLGFSIY+ +TQ + FW GLPQ NYYADQVI WVLA+A GAG AVS + K  +N 
Sbjct: 61  VHTILQLGFSIYYAVTQIVPFWKGLPQFNYYADQVINWVLASAAGAGLAVSADRKMLLNQ 120

Query: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180
            +  + GD    F+A +D+QK L++DFFD+ANIA+AILFLAF+S+ATLLLLSPFNRIKP 
Sbjct: 121 VVENDIGDCVVLFAA-LDQQKWLVNDFFDRANIASAILFLAFLSIATLLLLSPFNRIKPM 180

Query: 181 PLPTQD-----PEAQKLEAQSSQAQQTEAQS 206
           P  TQD     P+AQK++AQS QAQ+ EAQS
Sbjct: 181 PT-TQDLEAHSPQAQKIQAQSPQAQKVEAQS 209

[Close]

BLAST of IVF0023601 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-13
Identity = 55/178 (30.90%), Postives = 96/178 (53.93%), Query Frame = 0


Query: 4   KVLPLIGIGIRIFVFICLLIALVVIATDKLSLI---NGFKATFNDVHGYRYVLSVATIGL 63
           KVL L+   +R+   + L+IAL++++T+ ++++   +  K  F DV+ YRY+LS A IGL
Sbjct: 14  KVLLLL---LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGL 73

Query: 64  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 123
            + ++QL F+I    T     +N   Q+++Y D++I++++AT   AGF V+ +LK     
Sbjct: 74  VYAVIQLFFTISEFATGVKNPFN--YQLDFYGDKLISYLVATGSAAGFGVTKDLKD---- 133

Query: 124 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIK 179
                      F +    +    +D FF K   + ++L  AFI +A L + S F   K
Sbjct: 134 ----------TFLALVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAK 172

[Close]

BLAST of IVF0023601 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 72.0 bits (175), Expect = 6.4e-13
Identity = 58/175 (33.14%), Postives = 91/175 (52.00%), Query Frame = 0


Query: 13  IRIFVFICLLIALVVIATDKLSL---INGFKATFNDVHGYRYVLSVATIGLAHTILQLGF 72
           +R+     LLI +V+I+T+ ++L       K  FNDV+ YRY+LS A IGL + ++QL  
Sbjct: 20  LRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLFL 79

Query: 73  SIYHVLTQNILFWNGLP-QVNYYADQVITWVLATAVGAGFAVSGELKSYVNSRINKEFGD 132
           +I    T      + L  Q ++Y D+VI+++LAT   AGF VS +LK    + I  EF  
Sbjct: 80  TISQFATGKT---HPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALI--EF-- 139

Query: 133 YYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPTPLP 184
                     +    +D FF K   + ++L  AF+S+A L + S    +   P+P
Sbjct: 140 ----------DSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSL-ALSKRPVP 176

The following BLAST results are available for this feature:

BLAST of IVF0023601 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SXY8	1.4e-12	30.12	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
Q56X75	1.8e-12	30.90	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]
D7LD60	3.1e-12	33.74	CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]
D7LD59	6.9e-12	29.45	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]
Q8GWD5	9.0e-12	33.14	CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1	[more]

BLAST of IVF0023601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGC2	4.1e-108	100.00	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00...	[more]
A0A1S3BYF7	4.1e-108	100.00	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103494310 PE=3 SV=1	[more]
A0A0A0LSG6	2.8e-93	88.68	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G029610 PE=3 SV=1	[more]
A0A6J1C9J6	1.1e-71	76.68	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111008706 PE=3 SV=1	[more]
A0A6J1K769	8.9e-63	65.09	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492902 PE=3 SV=1	[more]

BLAST of IVF0023601 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454028.1	9.28e-140	100.00	PREDICTED: CASP-like protein 4D1 [Cucumis melo] >KAA0036037.1 CASP-like protein ...	[more]
XP_011649480.1	3.10e-120	88.68	CASP-like protein 4D2 [Cucumis sativus] >KGN63934.1 hypothetical protein Csa_014...	[more]
XP_038894422.1	6.43e-112	84.88	CASP-like protein 4D1 [Benincasa hispida]	[more]
XP_022137163.1	6.08e-92	76.68	CASP-like protein 4D1 [Momordica charantia]	[more]
XP_022998177.1	2.43e-80	66.35	CASP-like protein 4D1 [Cucurbita maxima]	[more]

BLAST of IVF0023601 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39518.1	1.3e-13	30.90	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	6.4e-13	33.14	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 7..163 e-value: 4.1E-16 score: 59.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..212
None	No IPR available	PANTHER	PTHR33573	CASP-LIKE PROTEIN 4A4	coord: 6..176
None	No IPR available	PANTHER	PTHR33573:SF17	CASP-LIKE PROTEIN 4D1	coord: 6..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023601.2	IVF0023601.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane