IVF0023576 (gene) Melon (IVF77) v1

Overview
NameIVF0023576
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr12: 11615238 .. 11615516 (-)
RNA-Seq ExpressionIVF0023576
SyntenyIVF0023576
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAAATTCAAAATGAAGTAGCAGTAAAGAAGCTGAGTGGTTGCAAGACTAGTTACAGACTAGGTTTGAAGGGTACTAGACTCAATTGTCCCAAAAATCATTCAAGTTTCAGATGCTTGATCAGTAAACTCGTTCATGCCTGATGTGTCGTCGGCCTTTCTTCTTTCTCTATTGACTCGGACTTTCTTCTCTGAGTTGATTCTGTCTACTATGTCTGGACCCTTTATAATTGGACTTTTGTTCTCCTATCTTCTTCTACTCAAGGGAGAAAATGA

mRNA sequence

ATGAAAGAAATTCAAAATGAAGTAGCAGTAAAGAAGCTGAGTGGTTGCAAGACTAGTTACAGACTAGGTTTGAAGGGTACTAGACTCAATTGTCCCAAAAATCATTCAAGTTTCAGATGCTTGATCATTGATTCTGTCTACTATGTCTGGACCCTTTATAATTGGACTTTTGTTCTCCTATCTTCTTCTACTCAAGGGAGAAAATGA

Coding sequence (CDS)

ATGAAAGAAATTCAAAATGAAGTAGCAGTAAAGAAGCTGAGTGGTTGCAAGACTAGTTACAGACTAGGTTTGAAGGGTACTAGACTCAATTGTCCCAAAAATCATTCAAGTTTCAGATGCTTGATCATTGATTCTGTCTACTATGTCTGGACCCTTTATAATTGGACTTTTGTTCTCCTATCTTCTTCTACTCAAGGGAGAAAATGA

Protein sequence

MKEIQNEVAVKKLSGCKTSYRLGLKGTRLNCPKNHSSFRCLIIDSVYYVWTLYNWTFVLLSSSTQGRK
Homology
[Close]
BLAST of IVF0023576 vs. NCBI nr
Match: KAE8637423.1 (hypothetical protein CSA_021609 [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 1.05e-12
Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 0 

Query: 1  MKEIQNEVAVKKLSGCKTSYRLGLKGTRLNCPKNHSSFRCLIIDSVYYVWTLYNWTFVLL 60
          MKEIQN+V VKK SGC+TS RL +KG  L+CP +  S  C I      VWT  NWTFVL 
Sbjct: 1  MKEIQNQVEVKKQSGCETSCRLRVKGRNLSCPGSRPSVGCSI------VWTPSNWTFVLT 60

Query: 61 SSSTQG 66
          S+   G
Sbjct: 61 STDLYG 60

The following BLAST results are available for this feature:
BLAST of IVF0023576 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0023576 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0023576 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8637423.11.05e-1254.55hypothetical protein CSA_021609 [Cucumis sativus][more]
BLAST of IVF0023576 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0023576.1IVF0023576.1mRNA