IVF0023569 (gene) Melon (IVF77) v1

Overview


Name	IVF0023569
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ethylene-responsive transcription factor RAP2-3-like
Location	chr11: 27132706 .. 27133837 (+)
RNA-Seq Expression	IVF0023569
Synteny	IVF0023569

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCGGTGGTGCCATTATCTCTGATTTTATAGAAAAAAGGCGAACTTGTAAGCTTAACAATGAATCTCTTTGTCCCACATCGATCCTTTCTCCGATCTCCTCGGCCTCAATTATTCCTCTGGTATGTTCATGTTCTTCTCATTCCCCATTCCCCATTTTTTTATAATTCTTTTCATTTCATTTGTTCCAAAAAGTTATCGCTAAATTATATTTTTTTTTACTTATTTGAAAGGAAGGAATAACGATGATTGATGAAGATCAATTTGTTTATATTTTATTCAATTAACTTTAAAAGTACTACGATTTTTTTTCTTCTATTATTTATTGCTTTTAGTTTAGCTCTAATCTTTTAAAATTTGATTTATATGAAAGTTGATAAAGTAATAATTTTTTATAATAGGAAATAAAATAGATAAATATGTTTTTAGAATTCATTGATTTATCGAAATATTGATTAAAATTGAACTATTATTAAGTAGATGAAGTTTGAATAAAAGTAGAGAAGGGAATGGAAATTTCTATGGTAATGGATATTGAGGTGTGACTGATTTGTAGTGAAAACTGAGAAGCCTAAGAAAGAGACCGATCTACGGCGGCGGAGGCGGTGGCGGTGGCGGTGGAGAAGACTCGAAAAGTTCGGAAGAATTTATACAGAGGAATCCGGCAACGGCCGTGGGGAAATGGGCGGCGGAGATTCGGGACCCACGAAAGGGAGTTCGAGTTTGGCTGGCACTTTCAACACCGCCGAGGAAGCCGCCAGAGCCTACGATGAAGCTGCCAAACGGATCCGAGGAGTAAAGGCCAAGCTGAACTTTGCTCCGGCGCCGCCGTCGCCCACGGCTCAGCCTCAAACTCCGGTGAAAAAGCAGTGCGTCCTCCCCGAGTTGACTCCGGGTGGCTTCAACACAACCGATTCGCCTCCGTGTACACGTGCGGATAGTTCGTGTGACAGCGAGGAGCTGTACTACGGCGAGGAGTTGGCGAGTTTAAGATCGTTCTTGGGGCTGGATGGTGAGGAGCAACAACCGAGTCAACTCGGTGGAAATGGGGAGTTTGAACGAGTTGATTTGGATCTTTGGATGATGGACGACATGTCGTTGAATGAGGAGAAATTCAGTCAGCTGGTATGA

mRNA sequence

ATGTGCGGTGGTGCCATTATCTCTGATTTTATAGAAAAAAGGCGAACTTGTAAGCTTAACAATGAATCTCTTTGTCCCACATCGATCCTTTCTCCGATCTCCTCGGCCTCAATTATTCCTCTGGTATGTTCATTGAAAACTGAGAAGCCTAAGAAAGAGACCGATCTACGGCGGCGGAGGCGGTGGCGGTGGCGGTGGAGAAGACTCGAAAAGTTCGGAAGAATTTATACAGAGGAATCCGGCAACGGCCGTGGGGAAATGGGCGGCGGAGATTCGGGACCCACGAAAGGGAGTTCGAGTTTGGCTGGCACTTTCAACACCGCCGAGGAAGCCGCCAGAGCCTACGATGAAGCTGCCAAACGGATCCGAGGAGTAAAGGCCAAGCTGAACTTTGCTCCGGCGCCGCCGTCGCCCACGGCTCAGCCTCAAACTCCGGTGAAAAAGCAGTGCGTCCTCCCCGAGTTGACTCCGGGTGGCTTCAACACAACCGATTCGCCTCCGTGTACACGTGCGGATAGTTCGTGTGACAGCGAGGAGCTGTACTACGGCGAGGAGTTGGCGAGTTTAAGATCGTTCTTGGGGCTGGATGGTGAGGAGCAACAACCGAGTCAACTCGGTGGAAATGGGGAGTTTGAACGAGTTGATTTGGATCTTTGGATGATGGACGACATGTCGTTGAATGAGGAGAAATTCAGTCAGCTGGTATGA

Coding sequence (CDS)

ATGTGCGGTGGTGCCATTATCTCTGATTTTATAGAAAAAAGGCGAACTTGTAAGCTTAACAATGAATCTCTTTGTCCCACATCGATCCTTTCTCCGATCTCCTCGGCCTCAATTATTCCTCTGGTATGTTCATTGAAAACTGAGAAGCCTAAGAAAGAGACCGATCTACGGCGGCGGAGGCGGTGGCGGTGGCGGTGGAGAAGACTCGAAAAGTTCGGAAGAATTTATACAGAGGAATCCGGCAACGGCCGTGGGGAAATGGGCGGCGGAGATTCGGGACCCACGAAAGGGAGTTCGAGTTTGGCTGGCACTTTCAACACCGCCGAGGAAGCCGCCAGAGCCTACGATGAAGCTGCCAAACGGATCCGAGGAGTAAAGGCCAAGCTGAACTTTGCTCCGGCGCCGCCGTCGCCCACGGCTCAGCCTCAAACTCCGGTGAAAAAGCAGTGCGTCCTCCCCGAGTTGACTCCGGGTGGCTTCAACACAACCGATTCGCCTCCGTGTACACGTGCGGATAGTTCGTGTGACAGCGAGGAGCTGTACTACGGCGAGGAGTTGGCGAGTTTAAGATCGTTCTTGGGGCTGGATGGTGAGGAGCAACAACCGAGTCAACTCGGTGGAAATGGGGAGTTTGAACGAGTTGATTTGGATCTTTGGATGATGGACGACATGTCGTTGAATGAGGAGAAATTCAGTCAGCTGGTATGA

Protein sequence

MCGGAIISDFIEKRRTCKLNNESLCPTSILSPISSASIIPLVCSLKTEKPKKETDLRRRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTAEEAARAYDEAAKRIRGVKAKLNFAPAPPSPTAQPQTPVKKQCVLPELTPGGFNTTDSPPCTRADSSCDSEELYYGEELASLRSFLGLDGEEQQPSQLGGNGEFERVDLDLWMMDDMSLNEEKFSQLV

Homology

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BLAST of IVF0023569 vs. ExPASy Swiss-Prot
Match: P42736 (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 8.8e-16
Identity = 90/269 (33.46%), Postives = 123/269 (45.72%), Query Frame = 0


Query: 1   MCGGAIISDF---IEKRRTCKLNNESL---------------CPTSILSPISSASIIPLV 60
           MCGGAIISD+   + K +  KL  E L                 TS L P +  ++    
Sbjct: 1   MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQVNV---- 60

Query: 61  CSLKTEKPKKE--TDLRRRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSS 120
              K E  KKE  T+  +RR+ +  +R + K             G+       P KG   
Sbjct: 61  ---KEEAVKKEQATEPGKRRKRKNVYRGIRK----------RPWGKWAAEIRDPRKGVRV 120

Query: 121 LAGTFNTAEEAARAYDEAAKRIRGVKAKLNF-----------APAPPSPTAQPQTPVKKQ 180
             GTFNTAEEAA AYD AAK+IRG KAKLNF            P P SP +  Q P KK 
Sbjct: 121 WLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKV 180

Query: 181 CVLPELTPGGFNTTDSPPCTRADSSCDSEELYYG--------EELASLRSFLGLDGE-EQ 230
           CV+ +        +    C    +  + + L YG        ++++SL SFL LDG   +
Sbjct: 181 CVVSQSESELSQPSFPVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELDGNTAE 240

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BLAST of IVF0023569 vs. ExPASy Swiss-Prot
Match: O22259 (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 GN=ERF071 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.0e-07
Identity = 58/162 (35.80%), Postives = 73/162 (45.06%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCPTSILSPISSASIIPLVCSLKTEKP---KKETDLR 60
           MCGGAIISDFI  +                   S  S +  V S K  KP    +E D +
Sbjct: 1   MCGGAIISDFIWSKSE-----------------SEPSQLGSVSSRKKRKPVSVSEERDGK 60

Query: 61  RRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTAEEAARAYDE 120
           R R+  +R  R   +G+   E               P+KG     GTF TA+EAARAYD 
Sbjct: 61  RERKNLYRGIRQRPWGKWAAE------------IRDPSKGVRVWLGTFKTADEAARAYDV 120

Query: 121 AAKRIRGVKAKLNFAPAPPSPTAQPQTPVKKQCVLPELTPGG 160
           AA +IRG KAKLNF          P T V+++    +  PGG
Sbjct: 121 AAIKIRGRKAKLNF----------PNTQVEEEA---DTKPGG 120

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BLAST of IVF0023569 vs. ExPASy Swiss-Prot
Match: Q8H0T5 (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 GN=ERF073 PE=1 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-07
Identity = 48/143 (33.57%), Postives = 69/143 (48.25%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCPTSILSPISSASIIPLVCSLKTEKP---------- 60
           MCGGA+ISD+I   +  + + +S   ++ +   S          L++++P          
Sbjct: 1   MCGGAVISDYIAPEKIARSSGKSSWRSNGVFDCSIYDFDGNFDELESDEPFVFSSTHKHH 60

Query: 61  --KKETDLRRRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTA 120
                +D ++++  R++  R   +GR   E               P KG     GTFNTA
Sbjct: 61  ASGSASDGKKKQSSRYKGIRRRPWGRWAAE------------IRDPIKGVRVWLGTFNTA 120

Query: 121 EEAARAYDEAAKRIRGVKAKLNF 132
           EEAARAYD  AKRIRG KAKLNF
Sbjct: 121 EEAARAYDLEAKRIRGAKAKLNF 131

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BLAST of IVF0023569 vs. ExPASy Swiss-Prot
Match: Q9LUM4 (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 GN=RAP2-2 PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 7.4e-07
Identity = 62/207 (29.95%), Postives = 84/207 (40.58%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCP---------------------------------- 60
           MCGGAIISDFI   R+ ++ NE + P                                  
Sbjct: 1   MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFK 60

Query: 61  ----------------------TSILSPISSASI---IPLVCSLKTEK-----PKKETDL 120
                                 T+   P++SA +   I LV S   +K      + E   
Sbjct: 61  DDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSS 120

Query: 121 RRRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTAEEAARAYD 144
           +R+R+ ++R  R   +G+   E               P KGS    GTF+TAEEAARAYD
Sbjct: 121 KRKRKNQYRGIRQRPWGKWAAE------------IRDPRKGSREWLGTFDTAEEAARAYD 180

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BLAST of IVF0023569 vs. ExPASy Swiss-Prot
Match: Q6K7E6 (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.8e-06
Identity = 28/42 (66.67%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 94  PTKGSSSLAGTFNTAEEAARAYDEAAKRIRGVKAKLNFAPAP 136
           P KG     GTFN+AEEAARAYD  A+RIRG KAK+NF  AP
Sbjct: 138 PRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPEAP 179

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BLAST of IVF0023569 vs. ExPASy TrEMBL
Match: A0A1S3C7W9 (ethylene-responsive transcription factor RAP2-3-like OS=Cucumis melo OX=3656 GN=LOC103497827 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 2.0e-79
Identity = 174/236 (73.73%), Postives = 181/236 (76.69%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCPTSILSPISSASIIPLVCSLKTEKPKKETDLRRRR 60
           MCGGAIISDFIEKRRTCKLNNESL   S + P S    +    S+KTEKPKK        
Sbjct: 20  MCGGAIISDFIEKRRTCKLNNESL--WSHIDPFSDLLGLN-YSSVKTEKPKKRDRSTAAE 79

Query: 61  RWRWRWRRLEKFGR-IYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTAEEAARAYDEAA 120
                  +  K  + +Y        G+       P KG     GTFNTAEEAARAYDEAA
Sbjct: 80  AVAVAVEKTRKVRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAA 139

Query: 121 KRIRGVKAKLNFAPAPPSPTAQPQTPVKKQCVLPELTPGGFNTTDSPPCTRADSSCDSEE 180
           KRIRGVKAKLNFAPAPPSPTAQPQTPVKKQCVLPELTPGGFNTTDSPPCTRADSSCDSEE
Sbjct: 140 KRIRGVKAKLNFAPAPPSPTAQPQTPVKKQCVLPELTPGGFNTTDSPPCTRADSSCDSEE 199

Query: 181 LYYGEELASLRSFLGLDGEEQQPSQLGGNGEFERVDLDLWMMDDMSLNEEKFSQLV 236
           LYYGEELASLRSFLGLDGEEQQPSQLGGNGEFERVDLDLWMMDDMSLNEEKFSQLV
Sbjct: 200 LYYGEELASLRSFLGLDGEEQQPSQLGGNGEFERVDLDLWMMDDMSLNEEKFSQLV 252

[Close]

BLAST of IVF0023569 vs. ExPASy TrEMBL
Match: A0A0A0KD18 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318160 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.2e-68
Identity = 160/239 (66.95%), Postives = 172/239 (71.97%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCPTSILSPISSASIIPLVCSLKTEKPKKETDLRRRR 60
           MCGGAIISDFIEK+RTCKLNNESL   S + P S    +    S+KTE PKK     R R
Sbjct: 1   MCGGAIISDFIEKKRTCKLNNESL--WSHIDPFSDLLGLN-YSSVKTETPKK-----RNR 60

Query: 61  RWRWRWRRLEKFGR----IYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTAEEAARAYD 120
                   +EK  +    IY        G+       P KG     GTFNTAEEAARAYD
Sbjct: 61  STAAEAVAVEKTRKARKNIYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYD 120

Query: 121 EAAKRIRGVKAKLNFAPAPPSPTAQPQTPVKKQCVLPELTPGGFNTTDSPPCTRADSSCD 180
           EAAKRIRG KAKLNFAPAPPS  AQ QTPVK QCV+PE TP G NTT SPPCTRADSSCD
Sbjct: 121 EAAKRIRGEKAKLNFAPAPPSLAAQRQTPVKMQCVVPEFTPSGLNTTGSPPCTRADSSCD 180

Query: 181 SEELYYGEELASLRSFLGLDGEEQQPSQLGGNGEFERVDLDLWMMDDMSLNEEKFSQLV 236
           SEELYYGEELASLRSFLGLD EEQQ S+LGGNGEFERVDLD+WMMDDMSLNE+KFSQ+V
Sbjct: 181 SEELYYGEELASLRSFLGLDSEEQQASELGGNGEFERVDLDVWMMDDMSLNEQKFSQMV 231

[Close]

BLAST of IVF0023569 vs. ExPASy TrEMBL
Match: A0A6J1CA63 (ethylene-responsive transcription factor RAP2-3-like OS=Momordica charantia OX=3673 GN=LOC111009718 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 8.7e-43
Identity = 127/257 (49.42%), Postives = 153/257 (59.53%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCPTSILSPISSASIIPLVCSLKTEKPKK-------- 60
           MCGGAIISDFIEK+R+ K +N  L   S + P S    +    S+K+EKP+K        
Sbjct: 1   MCGGAIISDFIEKKRSRKFSNGDL--WSEIDPFSDLLGLDF-SSVKSEKPQKRERSPAVA 60

Query: 61  ----ETDLRRRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTA 120
               E   R+ R+  +R  R   +G+   E               P KG     GTF+TA
Sbjct: 61  AEGIELKPRKTRKNLYRGIRQRPWGKWAAE------------IRDPQKGVRVWLGTFSTA 120

Query: 121 EEAARAYDEAAKRIRGVKAKLNFAPAPPSPTAQPQTPVKKQCVLPELTPGGFNTTDSPPC 180
           EEAARAYDEAAKRIRG KAKLNFAPA     AQPQ P KK+CVLPELT  G NTT  PP 
Sbjct: 121 EEAARAYDEAAKRIRGEKAKLNFAPA-----AQPQAPAKKRCVLPELTREGLNTT-GPPT 180

Query: 181 TRADSSCDSEELYYGEELAS----------LRSFLGLDGEEQQPSQLGGNGEFERVDLDL 236
               S+  ++ +YYG+ELAS          L SFLGLDGE+QQ SQLGG+ EF+RV +DL
Sbjct: 181 RSRTSNSYNDGIYYGDELASGFELKEQISNLTSFLGLDGEDQQLSQLGGSDEFDRVVVDL 236

[Close]

BLAST of IVF0023569 vs. ExPASy TrEMBL
Match: A0A6J1KF31 (ethylene-responsive transcription factor RAP2-3 OS=Cucurbita maxima OX=3661 GN=LOC111494435 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.5e-42
Identity = 127/240 (52.92%), Postives = 151/240 (62.92%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCP-TSILSPISSASIIPLVCSLKTEKPKKETDLRRR 60
           MCGGA+IS  IEK+R  KL+N SL P T   S +         C+LKTE P+K+      
Sbjct: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLD----YCALKTETPQKKCRATAE 60

Query: 61  RRWRWRWRRLEKFGR-IYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTAEEAARAYDEA 120
                   +  K  + IY        G+       P KG     GTFNTAEEAARAYDEA
Sbjct: 61  TAAVPEPEKTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEA 120

Query: 121 AKRIRGVKAKLNFAPAP-PSPTAQPQTPVKKQCVLPELTPGGFNTTDSPPC-TRADSSCD 180
           AKRIRG KAKLNFAP P P P +QP  P KK+CV  ELTP  F++T S P  TR ++SC+
Sbjct: 121 AKRIRGEKAKLNFAPRPQPLPVSQP--PAKKRCVAHELTPDCFSSTSSAPASTRVNNSCE 180

Query: 181 SEELYYGEELASLRSFLGLD-GEEQQPSQLGGNGEFERVDLDLWMMDDMSLNEEKFSQLV 236
            + LYYGEELASLRSFL LD  EEQQPSQ+GG+ EF +  ++LWMMDD SLNEEKFS +V
Sbjct: 181 IDGLYYGEELASLRSFLDLDFEEEQQPSQVGGSDEFGQA-VELWMMDDPSLNEEKFSSVV 233

[Close]

BLAST of IVF0023569 vs. ExPASy TrEMBL
Match: A0A6J1ER95 (ethylene-responsive transcription factor RAP2-3 OS=Cucurbita moschata OX=3662 GN=LOC111436844 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 6.3e-41
Identity = 124/248 (50.00%), Postives = 152/248 (61.29%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCP-TSILSPISSASIIPLVCSLKTEKPKKE------ 60
           MCGG++IS  IEK+R  KL N SL P T   S +         C+LKTE  +KE      
Sbjct: 1   MCGGSLISGIIEKKRGRKLRNGSLWPDTDHFSDLLGLD----YCALKTETSQKECRATAV 60

Query: 61  ---TDLRRRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTAEE 120
                 R+ R+  +R  R   +G+   E               P KG     GTFNTAEE
Sbjct: 61  PEPEKTRKARKNIYRGIRQRPWGKWAAE------------IRDPQKGVRVWLGTFNTAEE 120

Query: 121 AARAYDEAAKRIRGVKAKLNFAPAP-PSPTAQPQTPVKKQCVLPELTPGGFNTTD-SPPC 180
           AARAYDEAAKRIRG KAKLNFAP P P P +QP  P KK+CV  ELT   F++T  +P  
Sbjct: 121 AARAYDEAAKRIRGEKAKLNFAPRPQPLPVSQP--PAKKRCVAHELTSDCFSSTSPAPAS 180

Query: 181 TRADSSCDSEELYYGEELASLRSFLGLD-GEEQQPSQLGGNGEFERVDLDLWMMDDMSLN 236
           TR ++SC+ + LYYGEELASLRSFL LD  EEQ+PSQ+GG+ EF +  ++LWMMDD SLN
Sbjct: 181 TRVNNSCEIDGLYYGEELASLRSFLDLDFEEEQEPSQVGGSDEFGQA-VELWMMDDPSLN 229

[Close]

BLAST of IVF0023569 vs. NCBI nr
Match: XP_008458405.1 (PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Cucumis melo])

HSP 1 Score: 311 bits (796), Expect = 7.03e-104
Identity = 177/248 (71.37%), Postives = 185/248 (74.60%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCPTSILSPISSASIIPLVCSLKTEKPKKET------ 60
           MCGGAIISDFIEKRRTCKLNNESL   S + P S    +    S+KTEKPKK        
Sbjct: 20  MCGGAIISDFIEKRRTCKLNNESL--WSHIDPFSDLLGLNY-SSVKTEKPKKRDRSTAAE 79

Query: 61  -------DLRRRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNT 120
                    R+ R+  +R  R   +G+   E               P KG     GTFNT
Sbjct: 80  AVAVAVEKTRKVRKNLYRGIRQRPWGKWAAEIRD------------PRKGVRVWLGTFNT 139

Query: 121 AEEAARAYDEAAKRIRGVKAKLNFAPAPPSPTAQPQTPVKKQCVLPELTPGGFNTTDSPP 180
           AEEAARAYDEAAKRIRGVKAKLNFAPAPPSPTAQPQTPVKKQCVLPELTPGGFNTTDSPP
Sbjct: 140 AEEAARAYDEAAKRIRGVKAKLNFAPAPPSPTAQPQTPVKKQCVLPELTPGGFNTTDSPP 199

Query: 181 CTRADSSCDSEELYYGEELASLRSFLGLDGEEQQPSQLGGNGEFERVDLDLWMMDDMSLN 235
           CTRADSSCDSEELYYGEELASLRSFLGLDGEEQQPSQLGGNGEFERVDLDLWMMDDMSLN
Sbjct: 200 CTRADSSCDSEELYYGEELASLRSFLGLDGEEQQPSQLGGNGEFERVDLDLWMMDDMSLN 252

[Close]

BLAST of IVF0023569 vs. NCBI nr
Match: KGN47418.1 (hypothetical protein Csa_023005 [Cucumis sativus])

HSP 1 Score: 275 bits (704), Expect = 3.32e-90
Identity = 159/246 (64.63%), Postives = 173/246 (70.33%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCPTSILSPISSASIIPLVCSLKTEKPKKET------ 60
           MCGGAIISDFIEK+RTCKLNNESL   S + P S    +    S+KTE PKK        
Sbjct: 1   MCGGAIISDFIEKKRTCKLNNESL--WSHIDPFSDLLGLNY-SSVKTETPKKRNRSTAAE 60

Query: 61  -----DLRRRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTAE 120
                  R+ R+  +R  R   +G+   E               P KG     GTFNTAE
Sbjct: 61  AVAVEKTRKARKNIYRGIRQRPWGKWAAEIRD------------PRKGVRVWLGTFNTAE 120

Query: 121 EAARAYDEAAKRIRGVKAKLNFAPAPPSPTAQPQTPVKKQCVLPELTPGGFNTTDSPPCT 180
           EAARAYDEAAKRIRG KAKLNFAPAPPS  AQ QTPVK QCV+PE TP G NTT SPPCT
Sbjct: 121 EAARAYDEAAKRIRGEKAKLNFAPAPPSLAAQRQTPVKMQCVVPEFTPSGLNTTGSPPCT 180

Query: 181 RADSSCDSEELYYGEELASLRSFLGLDGEEQQPSQLGGNGEFERVDLDLWMMDDMSLNEE 235
           RADSSCDSEELYYGEELASLRSFLGLD EEQQ S+LGGNGEFERVDLD+WMMDDMSLNE+
Sbjct: 181 RADSSCDSEELYYGEELASLRSFLGLDSEEQQASELGGNGEFERVDLDVWMMDDMSLNEQ 231

[Close]

BLAST of IVF0023569 vs. NCBI nr
Match: XP_004153075.3 (ethylene-responsive transcription factor RAP2-3 [Cucumis sativus])

HSP 1 Score: 275 bits (704), Expect = 6.28e-90
Identity = 159/246 (64.63%), Postives = 173/246 (70.33%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCPTSILSPISSASIIPLVCSLKTEKPKKET------ 60
           MCGGAIISDFIEK+RTCKLNNESL   S + P S    +    S+KTE PKK        
Sbjct: 20  MCGGAIISDFIEKKRTCKLNNESL--WSHIDPFSDLLGLNY-SSVKTETPKKRNRSTAAE 79

Query: 61  -----DLRRRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTAE 120
                  R+ R+  +R  R   +G+   E               P KG     GTFNTAE
Sbjct: 80  AVAVEKTRKARKNIYRGIRQRPWGKWAAEIRD------------PRKGVRVWLGTFNTAE 139

Query: 121 EAARAYDEAAKRIRGVKAKLNFAPAPPSPTAQPQTPVKKQCVLPELTPGGFNTTDSPPCT 180
           EAARAYDEAAKRIRG KAKLNFAPAPPS  AQ QTPVK QCV+PE TP G NTT SPPCT
Sbjct: 140 EAARAYDEAAKRIRGEKAKLNFAPAPPSLAAQRQTPVKMQCVVPEFTPSGLNTTGSPPCT 199

Query: 181 RADSSCDSEELYYGEELASLRSFLGLDGEEQQPSQLGGNGEFERVDLDLWMMDDMSLNEE 235
           RADSSCDSEELYYGEELASLRSFLGLD EEQQ S+LGGNGEFERVDLD+WMMDDMSLNE+
Sbjct: 200 RADSSCDSEELYYGEELASLRSFLGLDSEEQQASELGGNGEFERVDLDVWMMDDMSLNEQ 250

[Close]

BLAST of IVF0023569 vs. NCBI nr
Match: KAE8647095.1 (hypothetical protein Csa_021726 [Cucumis sativus])

HSP 1 Score: 239 bits (609), Expect = 1.07e-75
Identity = 120/142 (84.51%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 94  PTKGSSSLAGTFNTAEEAARAYDEAAKRIRGVKAKLNFAPAPPSPTAQPQTPVKKQCVLP 153
           P KG     GTFNTAEEAARAYDEAAKRIRG KAKLNFAPAPPS  AQ QTPVK QCV+P
Sbjct: 96  PRKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPPSLAAQRQTPVKMQCVVP 155

Query: 154 ELTPGGFNTTDSPPCTRADSSCDSEELYYGEELASLRSFLGLDGEEQQPSQLGGNGEFER 213
           E TP G NTT SPPCTRADSSCDSEELYYGEELASLRSFLGLD EEQQ S+LGGNGEFER
Sbjct: 156 EFTPSGLNTTGSPPCTRADSSCDSEELYYGEELASLRSFLGLDSEEQQASELGGNGEFER 215

Query: 214 VDLDLWMMDDMSLNEEKFSQLV 235
           VDLD+WMMDDMSLNE+KFSQ+V
Sbjct: 216 VDLDVWMMDDMSLNEQKFSQMV 237

[Close]

BLAST of IVF0023569 vs. NCBI nr
Match: XP_038876065.1 (ethylene-responsive transcription factor RAP2-3-like [Benincasa hispida])

HSP 1 Score: 225 bits (573), Expect = 9.82e-70
Identity = 143/253 (56.52%), Postives = 162/253 (64.03%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCPTSILSPISSASIIPLVCS-LKTEKPKKETDLR-- 60
           MCGGAIISDFIEK+RT KL NESL   S + P S   ++ L  S +KTE+PKK       
Sbjct: 45  MCGGAIISDFIEKKRTRKLTNESL--WSHIDPFSD--LLALNYSPVKTEEPKKRDRATAA 104

Query: 61  -----------RRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSSLAGTFN 120
                      + R+  +R  R   +G+   E               P KG     GTFN
Sbjct: 105 EAVGVAVEKTPKTRKNLYRGIRQRPWGKWAAEIRD------------PQKGVRVWLGTFN 164

Query: 121 TAEEAARAYDEAAKRIRGVKAKLNFAPAPPS----PTAQPQTPVKKQCVLPELTPGGFNT 180
           TAEEAARAYDEAAKRIRG KAKLNFAPAPPS    P AQ Q+PVKK+CV+PE T GGFNT
Sbjct: 165 TAEEAARAYDEAAKRIRGEKAKLNFAPAPPSSRPLPAAQLQSPVKKRCVVPESTRGGFNT 224

Query: 181 TDSPPCTRADSSCDSEELYYGEELASLRSFLGLDGEEQQPSQLGGNGEFERVDLDLWMMD 235
           T  PPC       DS+E YYG+ELASLRSFLGLD EEQQP QL GNGE E VD+  WMMD
Sbjct: 225 TGPPPC-------DSDEFYYGQELASLRSFLGLDCEEQQPCQLSGNGELEPVDVGFWMMD 274

[Close]

BLAST of IVF0023569 vs. TAIR 10
Match: AT3G16770.1 (ethylene-responsive element binding protein )

HSP 1 Score: 85.5 bits (210), Expect = 6.2e-17
Identity = 90/269 (33.46%), Postives = 123/269 (45.72%), Query Frame = 0


Query: 1   MCGGAIISDF---IEKRRTCKLNNESL---------------CPTSILSPISSASIIPLV 60
           MCGGAIISD+   + K +  KL  E L                 TS L P +  ++    
Sbjct: 1   MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQVNV---- 60

Query: 61  CSLKTEKPKKE--TDLRRRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSS 120
              K E  KKE  T+  +RR+ +  +R + K             G+       P KG   
Sbjct: 61  ---KEEAVKKEQATEPGKRRKRKNVYRGIRK----------RPWGKWAAEIRDPRKGVRV 120

Query: 121 LAGTFNTAEEAARAYDEAAKRIRGVKAKLNF-----------APAPPSPTAQPQTPVKKQ 180
             GTFNTAEEAA AYD AAK+IRG KAKLNF            P P SP +  Q P KK 
Sbjct: 121 WLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKV 180

Query: 181 CVLPELTPGGFNTTDSPPCTRADSSCDSEELYYG--------EELASLRSFLGLDGE-EQ 230
           CV+ +        +    C    +  + + L YG        ++++SL SFL LDG   +
Sbjct: 181 CVVSQSESELSQPSFPVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELDGNTAE 240

[Close]

BLAST of IVF0023569 vs. TAIR 10
Match: AT1G72360.3 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 6.2e-09
Identity = 50/141 (35.46%), Postives = 68/141 (48.23%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCPTSILSPIS----------SASIIPLVCSLKTEKP 60
           MCGGA+ISD+I   +  + + +S   ++ +   S            S  P V S   +  
Sbjct: 1   MCGGAVISDYIAPEKIARSSGKSSWRSNGVFDCSIYDFDGNFDELESDEPFVFSSTHKHH 60

Query: 61  KKETDLRRRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTAEE 120
              +D ++++  R++  R   +GR   E               P KG     GTFNTAEE
Sbjct: 61  ASASDGKKKQSSRYKGIRRRPWGRWAAE------------IRDPIKGVRVWLGTFNTAEE 120

Query: 121 AARAYDEAAKRIRGVKAKLNF 132
           AARAYD  AKRIRG KAKLNF
Sbjct: 121 AARAYDLEAKRIRGAKAKLNF 129

[Close]

BLAST of IVF0023569 vs. TAIR 10
Match: AT2G47520.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-08
Identity = 58/162 (35.80%), Postives = 73/162 (45.06%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCPTSILSPISSASIIPLVCSLKTEKP---KKETDLR 60
           MCGGAIISDFI  +                   S  S +  V S K  KP    +E D +
Sbjct: 1   MCGGAIISDFIWSKSE-----------------SEPSQLGSVSSRKKRKPVSVSEERDGK 60

Query: 61  RRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTAEEAARAYDE 120
           R R+  +R  R   +G+   E               P+KG     GTF TA+EAARAYD 
Sbjct: 61  RERKNLYRGIRQRPWGKWAAE------------IRDPSKGVRVWLGTFKTADEAARAYDV 120

Query: 121 AAKRIRGVKAKLNFAPAPPSPTAQPQTPVKKQCVLPELTPGG 160
           AA +IRG KAKLNF          P T V+++    +  PGG
Sbjct: 121 AAIKIRGRKAKLNF----------PNTQVEEEA---DTKPGG 120

[Close]

BLAST of IVF0023569 vs. TAIR 10
Match: AT1G72360.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-08
Identity = 48/143 (33.57%), Postives = 69/143 (48.25%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCPTSILSPISSASIIPLVCSLKTEKP---------- 60
           MCGGA+ISD+I   +  + + +S   ++ +   S          L++++P          
Sbjct: 1   MCGGAVISDYIAPEKIARSSGKSSWRSNGVFDCSIYDFDGNFDELESDEPFVFSSTHKHH 60

Query: 61  --KKETDLRRRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTA 120
                +D ++++  R++  R   +GR   E               P KG     GTFNTA
Sbjct: 61  ASGSASDGKKKQSSRYKGIRRRPWGRWAAE------------IRDPIKGVRVWLGTFNTA 120

Query: 121 EEAARAYDEAAKRIRGVKAKLNF 132
           EEAARAYD  AKRIRG KAKLNF
Sbjct: 121 EEAARAYDLEAKRIRGAKAKLNF 131

[Close]

BLAST of IVF0023569 vs. TAIR 10
Match: AT3G14230.1 (related to AP2 2 )

HSP 1 Score: 55.8 bits (133), Expect = 5.3e-08
Identity = 62/207 (29.95%), Postives = 84/207 (40.58%), Query Frame = 0


Query: 1   MCGGAIISDFIEKRRTCKLNNESLCP---------------------------------- 60
           MCGGAIISDFI   R+ ++ NE + P                                  
Sbjct: 1   MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFK 60

Query: 61  ----------------------TSILSPISSASI---IPLVCSLKTEK-----PKKETDL 120
                                 T+   P++SA +   I LV S   +K      + E   
Sbjct: 61  DDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSS 120

Query: 121 RRRRRWRWRWRRLEKFGRIYTEESGNGRGEMGGGDSGPTKGSSSLAGTFNTAEEAARAYD 144
           +R+R+ ++R  R   +G+   E               P KGS    GTF+TAEEAARAYD
Sbjct: 121 KRKRKNQYRGIRQRPWGKWAAE------------IRDPRKGSREWLGTFDTAEEAARAYD 180

The following BLAST results are available for this feature:

BLAST of IVF0023569 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42736	8.8e-16	33.46	Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 ...	[more]
O22259	2.0e-07	35.80	Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8H0T5	2.6e-07	33.57	Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LUM4	7.4e-07	29.95	Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q6K7E6	4.8e-06	66.67	Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of IVF0023569 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7W9	2.0e-79	73.73	ethylene-responsive transcription factor RAP2-3-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KD18	1.2e-68	66.95	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318160 PE=...	[more]
A0A6J1CA63	8.7e-43	49.42	ethylene-responsive transcription factor RAP2-3-like OS=Momordica charantia OX=3...	[more]
A0A6J1KF31	1.5e-42	52.92	ethylene-responsive transcription factor RAP2-3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1ER95	6.3e-41	50.00	ethylene-responsive transcription factor RAP2-3 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of IVF0023569 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458405.1	7.03e-104	71.37	PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Cucumis melo]	[more]
KGN47418.1	3.32e-90	64.63	hypothetical protein Csa_023005 [Cucumis sativus]	[more]
XP_004153075.3	6.28e-90	64.63	ethylene-responsive transcription factor RAP2-3 [Cucumis sativus]	[more]
KAE8647095.1	1.07e-75	84.51	hypothetical protein Csa_021726 [Cucumis sativus]	[more]
XP_038876065.1	9.82e-70	56.52	ethylene-responsive transcription factor RAP2-3-like [Benincasa hispida]	[more]

BLAST of IVF0023569 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16770.1	6.2e-17	33.46	ethylene-responsive element binding protein	[more]
AT1G72360.3	6.2e-09	35.46	Integrase-type DNA-binding superfamily protein	[more]
AT2G47520.1	1.4e-08	35.80	Integrase-type DNA-binding superfamily protein	[more]
AT1G72360.2	1.8e-08	33.57	Integrase-type DNA-binding superfamily protein	[more]
AT3G14230.1	5.3e-08	29.95	related to AP2 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 108..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..102
None	No IPR available	PANTHER	PTHR31190:SF210	EREBP TRANSCRIPTION FACTOR	coord: 103..151
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 58..138 e-value: 3.0E-5 score: 32.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 102..124 e-value: 2.9E-4 score: 21.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 52..132 score: 11.706287
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 103..134 e-value: 1.25055E-13 score: 61.9039
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 55..133 e-value: 9.1E-11 score: 43.7
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 103..151
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 96..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023569.2	IVF0023569.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity