IVF0023556 (gene) Melon (IVF77) v1

Overview


Name	IVF0023556
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr04: 32091530 .. 32093579 (+)
RNA-Seq Expression	IVF0023556
Synteny	IVF0023556

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCTAAGCTTCACCGTCTCTCTTCCATTAAAGAACTGGAACAGGCCCAAGCTTTCATCGTCAAAGCCGGTTTCTTTAATCACATTCCTATAATGACGAAGCTAATTGCATTCTCCTCTCTTTCTCCATCAGGAAGTCTCCCTCGTGCTTATGCTCTCTTCCAAGAGACTTCCATGGACGATTCTTTCATTTGTAACACCATGATTCGGGCCTACTCCAATAGTGTTTTTCCCGTTAAAGCTTTGCTTATTTACAACCGTATGCAACGGATGGATGTTGATTCTGATCATTTCACCTACAATTTTGTGCTCAAAGCTTGTGCTACAGCTATCAAATGCACTGAAATGGACGATCAATGTTTTGGGCATGATATCATTTCTCGCAAGGGTGCTGAAATTCATGCACGCATCCTGAAATTGGGGTTTGATCAAGACCATCATGTCCAAAACTCATTGCTTCTAGTCTACTCTGGGCGTGGTTTGGTTGGTTTTGCTCGTTTGATTTTCAATGAGATGACTGTCAGAACTGCTGTATCCTGGAACATTATGATGTCCGCTTACAATCGAGTTCATGACTATAAGTCGGCGGATGTTCTTCTTGAATCGATGCCTCAGACAAATGCAGTTTCTTGGAATACCCTATTGGCACGATATATTAGGTTGAATAATCTTGTAGCAGCACGAAAAGTGTTTGAAGAAATGCCTGAGAGGGACGTTGTATCTTGGAATTCTATAATTGCCGGTTATGTAAAGGTCAAAGATTATAAGGGAGCTCTGGAGCTCTTCCATAGTATGAAACAGTGGAACATTCGTGCAACTGAAGTAACGTTTATCTCTATATTGGGTGCTTGTGCTGAACTGGGTGCACTGGAGACAGGGAAGAAAATCCACGAGTCCTTAAAAGAGAAGCATTACAAAATTGAAGGATATTTAGGTAATGCCATTGTAGATATGTACGCTAAATGCGGGGAACTGGCCTTAGCTTTGGAGGTATTCAATGAAATGGAGATGAAGCCTGTAAGTTGTTGGAATGCAATGATTATGGGTTTGGCAGTTCATGGTCACTGTGAGAAAGCCTTGGAGATGTTTGATTCGATGAAGGCAGAGGATGGTGATCACAAACCCAATCGGGTAACTTTCATTGCTCTTCTGATTGCCTGCAGTCACAAGGGTCTTGTGGCAGAAGGACGCCATTTTTTCAGTCTGATGGTTACCAAATACAAGATAATGCCGGATTTAAAGCACTATGGTTGCATGATTGACCTTCTTAGCAGATGGGGTTTTTGGAAGAAGCCTATGTTATGATAAAAACTTGCCCTTTCAGTTCATGCTCTGTTCTATGGAGAACGTTGTTGGGTGGTTGTAGAGTGCACAGGCGTGTAGAATTGGGGGAAGAATCGTTCCGCAGACTTGCAGAGTTGGAGCCTGGGAAAGATGGAGATTATGTACTGTTGTCAAACATCTACGCCGAAGAAGAGCGGTGGGATGATGTGGAACGACTGAGAAAGGAGATGATTAGTTATGGAGTCTGTAAGAAAGCTGGATCGAGTCACGTTTAAAACTCAATGGTCCAAGGGTTCAGCAAGGGAGGGAACTCCATGATGTTAGTGTTCATAATCCACCGGTGGATATTTAGTTGACCACGCTGTTTACTGTTTATACTGTTGATGGAGTTGGTGTGTTCATAATTTTCTGTTTCATTATTTTTTACACACTACACTTGCTTAGTTGCCTTCTCCTGCACTCTGCACATTACTGGAGTCATCATGGGGAGAAGGAAAAAAGGATTGAGATGGACCGTCAAGAATTGGGCCCTATTTAGGAATTTCTGATCTATAATTTTCAGTCAGTTCGTGGGGCTCAGCCCACTGCGTTTGTGACGAACTGTTACTTATGGGTTTTTCTAGCTTTCCCCTTGAGCCCAACGCCAACACCACTTTCGTCTGTCAAACCACGTGGAAATGAGGCCGATTTGTCCAAAGTCTGTCAAACTAGGGCGGTGCTGGTGCATGTGTTGTTAGCTAATTGGTCCAATGTTAGAACTTAA

mRNA sequence

ATGATTCCTAAGCTTCACCGTCTCTCTTCCATTAAAGAACTGGAACAGGCCCAAGCTTTCATCGTCAAAGCCGGTTTCTTTAATCACATTCCTATAATGACGAAGCTAATTGCATTCTCCTCTCTTTCTCCATCAGGAAGTCTCCCTCGTGCTTATGCTCTCTTCCAAGAGACTTCCATGGACGATTCTTTCATTTGTAACACCATGATTCGGGCCTACTCCAATAGTGTTTTTCCCGTTAAAGCTTTGCTTATTTACAACCGTATGCAACGGATGGATGTTGATTCTGATCATTTCACCTACAATTTTGTGCTCAAAGCTTGTGCTACAGCTATCAAATGCACTGAAATGGACGATCAATGTTTTGGGCATGATATCATTTCTCGCAAGGGTGCTGAAATTCATGCACGCATCCTGAAATTGGGGTTTGATCAAGACCATCATGTCCAAAACTCATTGCTTCTAGTCTACTCTGGGCGTGGTTTGGTTGGTTTTGCTCGTTTGATTTTCAATGAGATGACTGTCAGAACTGCTGTATCCTGGAACATTATGATGTCCGCTTACAATCGAGTTCATGACTATAAGTTGAATAATCTTGTAGCAGCACGAAAAGTGTTTGAAGAAATGCCTGAGAGGGACGTTGTATCTTGGAATTCTATAATTGCCGGTTATGTAAAGGTCAAAGATTATAAGGGAGCTCTGGAGCTCTTCCATAGTATGAAACAGTGGAACATTCGTGCAACTGAAGTAACGTTTATCTCTATATTGGGTGCTTGTGCTGAACTGGGTGCACTGGAGACAGGGAAGAAAATCCACGAGTCCTTAAAAGAGAAGCATTACAAAATTGAAGGATATTTAGGTAATGCCATTGTAGATATGTACGCTAAATGCGGGGAACTGGCCTTAGCTTTGGAGGTATTCAATGAAATGGAGATGAAGCCTGTAAGTTGTTGGAATGCAATGATTATGGGTTTGGCAGTTCATGGTCACTGTGAGAAAGCCTTGGAGATGTTTGATTCGATGAAGGCAGAGGATGGTGATCACAAACCCAATCGGGTAACTTTCATTGCTCTTCTGATTGCCTGCAGTCACAAGGGTCTTGTGGCAGAAGGACGCCATTTTTTCAGTCTGATGGTTACCAAATACAAGATAATGCCGGATTTAAAGCACTATGAAGCCTATGTTATGATAAAAACTTGCCCTTTCAGTTCATGCTCTGTTCTATGGAGAACGTTGTTGGGTGGTTGTAGAGTGCACAGGCGTGTAGAATTGGGGGAAGAATCGTTCCGCAGACTTGCAGAGTTGGAGCCTGGGAAAGATGGAGATTATGTACTGTTGTCAAACATCTACGCCGAAGAAGAGCGGTGGGATGATGTGGAACGACTGAGAAAGGAGATGATTAGTTATGGAGTCTGTAAGAAAGCTGGATCGAGTCACGAATTTCTGATCTATAATTTTCAGTCAGTTCGTGGGGCTCAGCCCACTGCGTTTGTGACGAACTGTTACTTATGGGTTTTTCTAGCTTTCCCCTTGAGCCCAACGCCAACACCACTTTCGTCTGTCAAACCACGTGGAAATGAGGCCGATTTGTCCAAAGTCTGTCAAACTAGGGCGGTGCTGGTGCATGTGTTGTTAGCTAATTGGTCCAATGTTAGAACTTAA

Coding sequence (CDS)

ATGATTCCTAAGCTTCACCGTCTCTCTTCCATTAAAGAACTGGAACAGGCCCAAGCTTTCATCGTCAAAGCCGGTTTCTTTAATCACATTCCTATAATGACGAAGCTAATTGCATTCTCCTCTCTTTCTCCATCAGGAAGTCTCCCTCGTGCTTATGCTCTCTTCCAAGAGACTTCCATGGACGATTCTTTCATTTGTAACACCATGATTCGGGCCTACTCCAATAGTGTTTTTCCCGTTAAAGCTTTGCTTATTTACAACCGTATGCAACGGATGGATGTTGATTCTGATCATTTCACCTACAATTTTGTGCTCAAAGCTTGTGCTACAGCTATCAAATGCACTGAAATGGACGATCAATGTTTTGGGCATGATATCATTTCTCGCAAGGGTGCTGAAATTCATGCACGCATCCTGAAATTGGGGTTTGATCAAGACCATCATGTCCAAAACTCATTGCTTCTAGTCTACTCTGGGCGTGGTTTGGTTGGTTTTGCTCGTTTGATTTTCAATGAGATGACTGTCAGAACTGCTGTATCCTGGAACATTATGATGTCCGCTTACAATCGAGTTCATGACTATAAGTTGAATAATCTTGTAGCAGCACGAAAAGTGTTTGAAGAAATGCCTGAGAGGGACGTTGTATCTTGGAATTCTATAATTGCCGGTTATGTAAAGGTCAAAGATTATAAGGGAGCTCTGGAGCTCTTCCATAGTATGAAACAGTGGAACATTCGTGCAACTGAAGTAACGTTTATCTCTATATTGGGTGCTTGTGCTGAACTGGGTGCACTGGAGACAGGGAAGAAAATCCACGAGTCCTTAAAAGAGAAGCATTACAAAATTGAAGGATATTTAGGTAATGCCATTGTAGATATGTACGCTAAATGCGGGGAACTGGCCTTAGCTTTGGAGGTATTCAATGAAATGGAGATGAAGCCTGTAAGTTGTTGGAATGCAATGATTATGGGTTTGGCAGTTCATGGTCACTGTGAGAAAGCCTTGGAGATGTTTGATTCGATGAAGGCAGAGGATGGTGATCACAAACCCAATCGGGTAACTTTCATTGCTCTTCTGATTGCCTGCAGTCACAAGGGTCTTGTGGCAGAAGGACGCCATTTTTTCAGTCTGATGGTTACCAAATACAAGATAATGCCGGATTTAAAGCACTATGAAGCCTATGTTATGATAAAAACTTGCCCTTTCAGTTCATGCTCTGTTCTATGGAGAACGTTGTTGGGTGGTTGTAGAGTGCACAGGCGTGTAGAATTGGGGGAAGAATCGTTCCGCAGACTTGCAGAGTTGGAGCCTGGGAAAGATGGAGATTATGTACTGTTGTCAAACATCTACGCCGAAGAAGAGCGGTGGGATGATGTGGAACGACTGAGAAAGGAGATGATTAGTTATGGAGTCTGTAAGAAAGCTGGATCGAGTCACGAATTTCTGATCTATAATTTTCAGTCAGTTCGTGGGGCTCAGCCCACTGCGTTTGTGACGAACTGTTACTTATGGGTTTTTCTAGCTTTCCCCTTGAGCCCAACGCCAACACCACTTTCGTCTGTCAAACCACGTGGAAATGAGGCCGATTTGTCCAAAGTCTGTCAAACTAGGGCGGTGCTGGTGCATGTGTTGTTAGCTAATTGGTCCAATGTTAGAACTTAA

Protein sequence

MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMDDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWNIMMSAYNRVHDYKLNNLVAARKVFEEMPERDVVSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHESLKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYEAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGDYVLLSNIYAEEERWDDVERLRKEMISYGVCKKAGSSHEFLIYNFQSVRGAQPTAFVTNCYLWVFLAFPLSPTPTPLSSVKPRGNEADLSKVCQTRAVLVHVLLANWSNVRT

Homology

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BLAST of IVF0023556 vs. ExPASy Swiss-Prot
Match: Q9LXF2 (Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E40 PE=2 SV=2)

HSP 1 Score: 307.0 bits (785), Expect = 4.4e-82
Identity = 181/527 (34.35%), Postives = 282/527 (53.51%), Query Frame = 0


Query: 3   PKL-HRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMD 62
           PKL     +I+ L+Q  A +V  G  +++ ++ +LI  +SLS  G+L  A+ LF E    
Sbjct: 16  PKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKP 75

Query: 63  DSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQC 122
           D  ICN ++R  + S+ P K + +Y  M++  V  D +T+ FVLKAC+            
Sbjct: 76  DVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKL---------- 135

Query: 123 FGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLV------------------------- 182
                    G   H ++++ GF  + +V+N+L+L                          
Sbjct: 136 ----EWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAW 195

Query: 183 ------YSGRGLVGFARLIFNEMTVRTAVSWNIMMSAYNRVHDYKLNNLVAARKVFEEMP 242
                 Y+ RG +  A  +F+EM  +  V+WN+M++        K   + +AR++F+   
Sbjct: 196 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGC-----LKCKEMDSARELFDRFT 255

Query: 243 ERDVVSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKK 302
           E+DVV+WN++I+GYV     K AL +F  M+        VT +S+L ACA LG LETGK+
Sbjct: 256 EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKR 315

Query: 303 IH-ESLKEKHYKIEGYLG----NAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGL 362
           +H   L+        Y+G    NA++DMYAKCG +  A+EVF  ++ + +S WN +I+GL
Sbjct: 316 LHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGL 375

Query: 363 AVHGHCEKALEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIM 422
           A+H H E ++EMF+ M+       PN VTFI +++ACSH G V EGR +FSLM   Y I 
Sbjct: 376 ALH-HAEGSIEMFEEMQRL--KVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIE 435

Query: 423 PDLKHY--------------EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRR 479
           P++KHY              EA++ +++      +++WRTLLG C+++  VELG+ +  +
Sbjct: 436 PNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEK 495

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BLAST of IVF0023556 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 6.3e-81
Identity = 178/501 (35.53%), Postives = 262/501 (52.30%), Query Frame = 0


Query: 5   LHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFS-SLSPSGSLPRAYALFQETSMDDS 64
           L R S  +EL+Q  A ++K G       +TK ++F  S + S  LP A  +F      D+
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80

Query: 65  FICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCFG 124
           F+ N MIR +S S  P ++LL+Y RM       + +T+  +LKAC+      E       
Sbjct: 81  FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET------ 140

Query: 125 HDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWNI 184
                    +IHA+I KLG++ D +  NSL+  Y+  G    A L+F+ +     VSWN 
Sbjct: 141 --------TQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 200

Query: 185 MMSAYNRVHDYKLNNLVAARKVFEEMPERDVVSWNSIIAGYVKVKDYKGALELFHSMKQW 244
           ++  Y      K   +  A  +F +M E++ +SW ++I+GYV+    K AL+LFH M+  
Sbjct: 201 VIKGY-----VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS 260

Query: 245 NIRATEVTFISILGACAELGALETGKKIHESLKEKHYKIEGYLGNAIVDMYAKCGELALA 304
           ++    V+  + L ACA+LGALE GK IH  L +   +++  LG  ++DMYAKCGE+  A
Sbjct: 261 DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 320

Query: 305 LEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALEMFDSMKAEDGDHKPNRVTFIALLIACS 364
           LEVF  ++ K V  W A+I G A HGH  +A+  F  M+ +    KPN +TF A+L ACS
Sbjct: 321 LEVFKNIKKKSVQAWTALISGYAYHGHGREAISKF--MEMQKMGIKPNVITFTAVLTACS 380

Query: 365 HKGLVAEGRHFFSLMVTKYKIMPDLKHY--------------EAYVMIKTCPFSSCSVLW 424
           + GLV EG+  F  M   Y + P ++HY              EA   I+  P    +V+W
Sbjct: 381 YTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 440

Query: 425 RTLLGGCRVHRRVELGEESFRRLAELEPGKDGDYVLLSNIYAEEERWDDVERLRKEMISY 483
             LL  CR+H+ +ELGEE    L  ++P   G YV  +NI+A +++WD     R+ M   
Sbjct: 441 GALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQ 500

[Close]

BLAST of IVF0023556 vs. ExPASy Swiss-Prot
Match: Q56X05 (Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX=3702 GN=EMB1444 PE=2 SV=2)

HSP 1 Score: 295.0 bits (754), Expect = 1.7e-78
Identity = 168/509 (33.01%), Postives = 262/509 (51.47%), Query Frame = 0


Query: 5   LHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMDDSF 64
           + + S+ K LE A A ++K        +M + I  ++ +    L  A +   +    + F
Sbjct: 35  IKQCSTPKLLESALAAMIKTSLNQDCRLMNQFI--TACTSFKRLDLAVSTMTQMQEPNVF 94

Query: 65  ICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCFGH 124
           + N + + +     P+++L +Y RM R  V    +TY+ ++KA + A             
Sbjct: 95  VYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFA------------- 154

Query: 125 DIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWNIM 184
              SR G  + A I K GF     +Q +L+  YS  G +  AR +F+EM  R  ++W  M
Sbjct: 155 ---SRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTM 214

Query: 185 MSAYNRVHDYK--------------------------LNNLVAARKVFEEMPERDVVSWN 244
           +SAY RV D                            L NL  A  +F +MP +D++SW 
Sbjct: 215 VSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWT 274

Query: 245 SIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHESLKEK 304
           ++I GY + K Y+ A+ +F+ M +  I   EVT  +++ ACA LG LE GK++H    + 
Sbjct: 275 TMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQN 334

Query: 305 HYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALEMF 364
            + ++ Y+G+A+VDMY+KCG L  AL VF  +  K + CWN++I GLA HG  ++AL+MF
Sbjct: 335 GFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMF 394

Query: 365 DSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKH-------- 424
             M+ E    KPN VTF+++  AC+H GLV EGR  +  M+  Y I+ +++H        
Sbjct: 395 AKMEME--SVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLF 454

Query: 425 ------YEAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGDYV 474
                 YEA  +I    F   +V+W  LL GCR+H+ + + E +F +L  LEP   G Y 
Sbjct: 455 SKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYF 514

[Close]

BLAST of IVF0023556 vs. ExPASy Swiss-Prot
Match: Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 8.5e-78
Identity = 182/574 (31.71%), Postives = 282/574 (49.13%), Query Frame = 0


Query: 2   IPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMD 61
           +PK   L+ +K+L    A I++      + I  KLI+  SL    +L  A  +F +    
Sbjct: 26  LPKCANLNQVKQL---HAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQEP 85

Query: 62  DSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACA--TAIKCTEMDD 121
           +  +CN++IRA++ +  P +A  +++ MQR  + +D+FTY F+LKAC+  + +   +M  
Sbjct: 86  NVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKM-- 145

Query: 122 QCFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGF--ARLIFNEMTVRT 181
                         +H  I KLG   D +V N+L+  YS  G +G   A  +F +M+ R 
Sbjct: 146 --------------MHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD 205

Query: 182 AVSWNIMMSAYNRVHDYKLNNLVAARKVFEEMPERDVVSWNSIIAGYVKVKDYKGALELF 241
            VSWN M+         K   L  AR++F+EMP+RD++SWN+++ GY + ++   A ELF
Sbjct: 206 TVSWNSMLGGL-----VKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELF 265

Query: 242 HSMKQWN----------------------------------------------------- 301
             M + N                                                     
Sbjct: 266 EKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEA 325

Query: 302 -----------IRATEVTFISILGACAELGALETGKKIHESLKEKHYKIEGYLGNAIVDM 361
                      ++      ISIL AC E G L  G +IH  LK  +     Y+ NA++DM
Sbjct: 326 DRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDM 385

Query: 362 YAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALEMFDSMKAEDGDHKPNRV 421
           YAKCG L  A +VFN++  K +  WN M+ GL VHGH ++A+E+F  M+ E    +P++V
Sbjct: 386 YAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRRE--GIRPDKV 445

Query: 422 TFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY--------------EAYVMIKT 481
           TFIA+L +C+H GL+ EG  +F  M   Y ++P ++HY              EA  +++T
Sbjct: 446 TFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQT 505

Query: 482 CPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGDYVLLSNIYAEEERWDDV 486
            P     V+W  LLG CR+H  V++ +E    L +L+P   G+Y LLSNIYA  E W+ V
Sbjct: 506 MPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGV 565

[Close]

BLAST of IVF0023556 vs. ExPASy Swiss-Prot
Match: O49399 (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E101 PE=3 SV=2)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-76
Identity = 171/502 (34.06%), Postives = 259/502 (51.59%), Query Frame = 0


Query: 7   RLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPS-GSLPRAYALFQETSMDDSFI 66
           R  S+ E++QA AF++K G F+     +KL+AF++ +P   ++  A+++       + F 
Sbjct: 48  RAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFT 107

Query: 67  CNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCFGHD 126
            N++IRAY+NS  P  AL ++  M    V  D +++ FVLKACA      E         
Sbjct: 108 HNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEE--------- 167

Query: 127 IISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWNIMM 186
                G +IH   +K G   D  V+N+L+ VY   G    AR + + M VR AVSWN ++
Sbjct: 168 -----GRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 227

Query: 187 SAYNR-------------------------VHDYKLNNLV-AARKVFEEMPERDVVSWNS 246
           SAY                           +  Y    LV  A++VF+ MP RDVVSWN+
Sbjct: 228 SAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNA 287

Query: 247 IIAGYVKVKDYKGALELFHSMKQWNIRATE-VTFISILGACAELGALETGKKIHESLKEK 306
           ++  Y  V  Y   LE+F+ M   +    +  T +S+L ACA LG+L  G+ +H  + + 
Sbjct: 288 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 347

Query: 307 HYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALEMF 366
             +IEG+L  A+VDMY+KCG++  ALEVF     + VS WN++I  L+VHG  + ALE+F
Sbjct: 348 GIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIF 407

Query: 367 DSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY------- 426
             M  E    KPN +TFI +L AC+H G++ + R  F +M + Y++ P ++HY       
Sbjct: 408 SEMVYE--GFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLL 467

Query: 427 -------EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGDYV 467
                  EA  ++   P    S+L  +LLG C+   ++E  E    RL EL       Y 
Sbjct: 468 GRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYA 527

[Close]

BLAST of IVF0023556 vs. ExPASy TrEMBL
Match: A0A5D3DN16 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00260 PE=4 SV=1)

HSP 1 Score: 956.1 bits (2470), Expect = 6.6e-275
Identity = 479/519 (92.29%), Postives = 479/519 (92.29%), Query Frame = 0


Query: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60
           MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM
Sbjct: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60

Query: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120
           DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ
Sbjct: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120

Query: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180
           CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS
Sbjct: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180

Query: 181 WNIMMSAYNRVHDYK--------------------------LNNLVAARKVFEEMPERDV 240
           WNIMMSAYNRVHDYK                          LNNLVAARKVFEEMPERDV
Sbjct: 181 WNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDV 240

Query: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300
           VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES
Sbjct: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300

Query: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA 360
           LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA
Sbjct: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA 360

Query: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY--- 420
           LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY   
Sbjct: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCM 420

Query: 421 -----------EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 480
                      EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD
Sbjct: 421 IDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 480

[Close]

BLAST of IVF0023556 vs. ExPASy TrEMBL
Match: A0A1S3B5F5 (pentatricopeptide repeat-containing protein At5g15300-like OS=Cucumis melo OX=3656 GN=LOC103486232 PE=4 SV=1)

HSP 1 Score: 956.1 bits (2470), Expect = 6.6e-275
Identity = 479/519 (92.29%), Postives = 479/519 (92.29%), Query Frame = 0


Query: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60
           MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM
Sbjct: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60

Query: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120
           DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ
Sbjct: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120

Query: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180
           CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS
Sbjct: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180

Query: 181 WNIMMSAYNRVHDYK--------------------------LNNLVAARKVFEEMPERDV 240
           WNIMMSAYNRVHDYK                          LNNLVAARKVFEEMPERDV
Sbjct: 181 WNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDV 240

Query: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300
           VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES
Sbjct: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300

Query: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA 360
           LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA
Sbjct: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA 360

Query: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY--- 420
           LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY   
Sbjct: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCM 420

Query: 421 -----------EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 480
                      EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD
Sbjct: 421 IDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 480

[Close]

BLAST of IVF0023556 vs. ExPASy TrEMBL
Match: A0A0A0LD95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728140 PE=4 SV=1)

HSP 1 Score: 953.4 bits (2463), Expect = 4.3e-274
Identity = 477/576 (82.81%), Postives = 496/576 (86.11%), Query Frame = 0


Query: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60
           MIPKLHRLS IKELEQAQAFIVKAGF+NHIPI+TKLIAFSSLSP GSLP A ALFQETSM
Sbjct: 2   MIPKLHRLSCIKELEQAQAFIVKAGFYNHIPIITKLIAFSSLSPLGSLPHACALFQETSM 61

Query: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120
           DDSFICNTMIRAYSN+VFP+KALLIYNRMQRMDVDSDHFTYNFVL+ACA AIKCTEMDDQ
Sbjct: 62  DDSFICNTMIRAYSNTVFPLKALLIYNRMQRMDVDSDHFTYNFVLRACARAIKCTEMDDQ 121

Query: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180
           CFGH IISRKG+EIHARILKLGFDQDHHVQNSLLLVYSG GLVGFARLIFNEMTV+TAVS
Sbjct: 122 CFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLVGFARLIFNEMTVKTAVS 181

Query: 181 WNIMMSAYNRVHDYK--------------------------LNNLVAARKVFEEMPERDV 240
           WNIMMSAYNRVHDYK                          LNNLVAARKVFEEMPERDV
Sbjct: 182 WNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDV 241

Query: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300
           VSWNSII+GYV VKDYKGAL+LFHSMKQWNIRATEVTFISILGACAELGALE GKKIH+S
Sbjct: 242 VSWNSIISGYVNVKDYKGALDLFHSMKQWNIRATEVTFISILGACAELGALEIGKKIHDS 301

Query: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA 360
           LKEKHY+IEGYLGNAIVDMYAKCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCE+A
Sbjct: 302 LKEKHYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA 361

Query: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY--- 420
           LEMFDSMKAEDGDHKPNR+TFIALLIACSHKGL+AEGRHFFSLMVTKYKIMPDLKHY   
Sbjct: 362 LEMFDSMKAEDGDHKPNRITFIALLIACSHKGLLAEGRHFFSLMVTKYKIMPDLKHYGCM 421

Query: 421 -----------EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 480
                      EAYVMIKTCPFSSCSVLWRTLLGGCR+HR VELGEESFR+LAELEPGKD
Sbjct: 422 IDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRLHRHVELGEESFRKLAELEPGKD 481

Query: 481 GDYVLLSNIYAEEERWDDVERLRKEMISYGVCKKAGSSH--------------------- 514
           GDYVLLSNIYAEEERWDDVERLRKEMI+YGVCKKAGSSH                     
Sbjct: 482 GDYVLLSNIYAEEERWDDVERLRKEMINYGVCKKAGSSHNSRRHGEEEKGLRWTLKSWAL 541

[Close]

BLAST of IVF0023556 vs. ExPASy TrEMBL
Match: A0A5A7TL32 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005830 PE=4 SV=1)

HSP 1 Score: 952.6 bits (2461), Expect = 7.3e-274
Identity = 477/519 (91.91%), Postives = 479/519 (92.29%), Query Frame = 0


Query: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60
           MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM
Sbjct: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60

Query: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120
           DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ
Sbjct: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120

Query: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180
           CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS
Sbjct: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180

Query: 181 WNIMMSAYNRVHDYK--------------------------LNNLVAARKVFEEMPERDV 240
           WNIMMSAYNRVHDYK                          LNNLVAARKVFEEMPERDV
Sbjct: 181 WNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDV 240

Query: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300
           VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES
Sbjct: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300

Query: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA 360
           LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHG+CEKA
Sbjct: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGYCEKA 360

Query: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY--- 420
           LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY   
Sbjct: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCM 420

Query: 421 -----------EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 480
                      EAYV+IKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD
Sbjct: 421 IDLLSRWGFLEEAYVLIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 480

[Close]

BLAST of IVF0023556 vs. ExPASy TrEMBL
Match: A0A6J1F4H4 (pentatricopeptide repeat-containing protein At5g15300-like OS=Cucurbita moschata OX=3662 GN=LOC111442085 PE=4 SV=1)

HSP 1 Score: 826.2 bits (2133), Expect = 7.9e-236
Identity = 411/519 (79.19%), Postives = 442/519 (85.16%), Query Frame = 0


Query: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60
           ++PKL RLSS+KELE A AFIVKAG  NHIP+MTKLIAFSSLSPSGSLP A+ALFQ+ SM
Sbjct: 10  ILPKLLRLSSMKELELAHAFIVKAGLCNHIPVMTKLIAFSSLSPSGSLPHAHALFQDISM 69

Query: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120
           DDSFICNTMIRAYSNSVFP+KALLIYN MQRMDV SDHFTYNFVLKACA AIKCTE DDQ
Sbjct: 70  DDSFICNTMIRAYSNSVFPLKALLIYNHMQRMDVHSDHFTYNFVLKACARAIKCTEKDDQ 129

Query: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180
           CFGHDIISRKGAEIH+R+LKLG DQDHHVQNSLLL+YSG GLV FAR++F EMTVR+AVS
Sbjct: 130 CFGHDIISRKGAEIHSRVLKLGLDQDHHVQNSLLLMYSGCGLVVFARMLFEEMTVRSAVS 189

Query: 181 WNIMMSAYNRVHDYK--------------------------LNNLVAARKVFEEMPERDV 240
           WNIMMSAYNRV DYK                          LNNLVAARKVFEEMPERDV
Sbjct: 190 WNIMMSAYNRVRDYKSADSLLQLMPQTNVTSWNTVLARYIGLNNLVAARKVFEEMPERDV 249

Query: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300
           VSWNSIIAGYVKVKDYK A+E+FHSMKQ  IRATEVTFISILGACAE G+LE GKKIHES
Sbjct: 250 VSWNSIIAGYVKVKDYKRAVEVFHSMKQSGIRATEVTFISILGACAETGSLEMGKKIHES 309

Query: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA 360
           LK +HY+IEGYLGNAIVDMYAKCGEL+LALEVFNEMEMKPVSCWNAMIMGLAVHG+CE+A
Sbjct: 310 LKAEHYRIEGYLGNAIVDMYAKCGELSLALEVFNEMEMKPVSCWNAMIMGLAVHGYCERA 369

Query: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY--- 420
           L+MFDSM+  + DHKPNRVTF+A+LIACSHKGLVAEGRHF SLM+ KYKIMPDLKHY   
Sbjct: 370 LDMFDSMEVGNDDHKPNRVTFVAILIACSHKGLVAEGRHFLSLMINKYKIMPDLKHYGCM 429

Query: 421 -----------EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 480
                      EAY MIK CPFSSC+V+WRTLLGGCRVHR VELGEE+F +L ELE  KD
Sbjct: 430 VDLLSRWGFLQEAYEMIKGCPFSSCAVVWRTLLGGCRVHRHVELGEEAFCKLGELEARKD 489

[Close]

BLAST of IVF0023556 vs. NCBI nr
Match: XP_008442325.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like [Cucumis melo] >TYK24912.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 949 bits (2453), Expect = 0.0
Identity = 479/519 (92.29%), Postives = 479/519 (92.29%), Query Frame = 0


Query: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60
           MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM
Sbjct: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60

Query: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120
           DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ
Sbjct: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120

Query: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180
           CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS
Sbjct: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180

Query: 181 WNIMMSAYNRVHDYK--------------------------LNNLVAARKVFEEMPERDV 240
           WNIMMSAYNRVHDYK                          LNNLVAARKVFEEMPERDV
Sbjct: 181 WNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDV 240

Query: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300
           VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES
Sbjct: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300

Query: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA 360
           LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA
Sbjct: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA 360

Query: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY--- 420
           LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY   
Sbjct: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCM 420

Query: 421 -----------EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 479
                      EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD
Sbjct: 421 IDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 480

[Close]

BLAST of IVF0023556 vs. NCBI nr
Match: KGN58697.1 (hypothetical protein Csa_000806 [Cucumis sativus])

HSP 1 Score: 946 bits (2446), Expect = 0.0
Identity = 481/597 (80.57%), Postives = 506/597 (84.76%), Query Frame = 0


Query: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60
           MIPKLHRLS IKELEQAQAFIVKAGF+NHIPI+TKLIAFSSLSP GSLP A ALFQETSM
Sbjct: 2   MIPKLHRLSCIKELEQAQAFIVKAGFYNHIPIITKLIAFSSLSPLGSLPHACALFQETSM 61

Query: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120
           DDSFICNTMIRAYSN+VFP+KALLIYNRMQRMDVDSDHFTYNFVL+ACA AIKCTEMDDQ
Sbjct: 62  DDSFICNTMIRAYSNTVFPLKALLIYNRMQRMDVDSDHFTYNFVLRACARAIKCTEMDDQ 121

Query: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180
           CFGH IISRKG+EIHARILKLGFDQDHHVQNSLLLVYSG GLVGFARLIFNEMTV+TAVS
Sbjct: 122 CFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLVGFARLIFNEMTVKTAVS 181

Query: 181 WNIMMSAYNRVHDYK--------------------------LNNLVAARKVFEEMPERDV 240
           WNIMMSAYNRVHDYK                          LNNLVAARKVFEEMPERDV
Sbjct: 182 WNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDV 241

Query: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300
           VSWNSII+GYV VKDYKGAL+LFHSMKQWNIRATEVTFISILGACAELGALE GKKIH+S
Sbjct: 242 VSWNSIISGYVNVKDYKGALDLFHSMKQWNIRATEVTFISILGACAELGALEIGKKIHDS 301

Query: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA 360
           LKEKHY+IEGYLGNAIVDMYAKCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCE+A
Sbjct: 302 LKEKHYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA 361

Query: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY--- 420
           LEMFDSMKAEDGDHKPNR+TFIALLIACSHKGL+AEGRHFFSLMVTKYKIMPDLKHY   
Sbjct: 362 LEMFDSMKAEDGDHKPNRITFIALLIACSHKGLLAEGRHFFSLMVTKYKIMPDLKHYGCM 421

Query: 421 -----------EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 480
                      EAYVMIKTCPFSSCSVLWRTLLGGCR+HR VELGEESFR+LAELEPGKD
Sbjct: 422 IDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRLHRHVELGEESFRKLAELEPGKD 481

Query: 481 GDYVLLSNIYAEEERWDDVERLRKEMISYGVCKKAGSSH--------------------- 534
           GDYVLLSNIYAEEERWDDVERLRKEMI+YGVCKKAGSSH                     
Sbjct: 482 GDYVLLSNIYAEEERWDDVERLRKEMINYGVCKKAGSSHNSRRHGEEEKGLRWTLKSWAL 541

[Close]

BLAST of IVF0023556 vs. NCBI nr
Match: KAA0044223.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 946 bits (2444), Expect = 0.0
Identity = 477/519 (91.91%), Postives = 479/519 (92.29%), Query Frame = 0


Query: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60
           MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM
Sbjct: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60

Query: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120
           DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ
Sbjct: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120

Query: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180
           CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS
Sbjct: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180

Query: 181 WNIMMSAYNRVHDYK--------------------------LNNLVAARKVFEEMPERDV 240
           WNIMMSAYNRVHDYK                          LNNLVAARKVFEEMPERDV
Sbjct: 181 WNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDV 240

Query: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300
           VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES
Sbjct: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300

Query: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA 360
           LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHG+CEKA
Sbjct: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGYCEKA 360

Query: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY--- 420
           LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY   
Sbjct: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCM 420

Query: 421 -----------EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 479
                      EAYV+IKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD
Sbjct: 421 IDLLSRWGFLEEAYVLIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 480

[Close]

BLAST of IVF0023556 vs. NCBI nr
Match: XP_004137888.1 (pentatricopeptide repeat-containing protein At5g15300 [Cucumis sativus])

HSP 1 Score: 905 bits (2339), Expect = 0.0
Identity = 451/519 (86.90%), Postives = 468/519 (90.17%), Query Frame = 0


Query: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60
           MIPKLHRLS IKELEQAQAFIVKAGF+NHIPI+TKLIAFSSLSP GSLP A ALFQETSM
Sbjct: 2   MIPKLHRLSCIKELEQAQAFIVKAGFYNHIPIITKLIAFSSLSPLGSLPHACALFQETSM 61

Query: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120
           DDSFICNTMIRAYSN+VFP+KALLIYNRMQRMDVDSDHFTYNFVL+ACA AIKCTEMDDQ
Sbjct: 62  DDSFICNTMIRAYSNTVFPLKALLIYNRMQRMDVDSDHFTYNFVLRACARAIKCTEMDDQ 121

Query: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180
           CFGH IISRKG+EIHARILKLGFDQDHHVQNSLLLVYSG GLVGFARLIFNEMTV+TAVS
Sbjct: 122 CFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLVGFARLIFNEMTVKTAVS 181

Query: 181 WNIMMSAYNRVHDYK--------------------------LNNLVAARKVFEEMPERDV 240
           WNIMMSAYNRVHDYK                          LNNLVAARKVFEEMPERDV
Sbjct: 182 WNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDV 241

Query: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300
           VSWNSII+GYV VKDYKGAL+LFHSMKQWNIRATEVTFISILGACAELGALE GKKIH+S
Sbjct: 242 VSWNSIISGYVNVKDYKGALDLFHSMKQWNIRATEVTFISILGACAELGALEIGKKIHDS 301

Query: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA 360
           LKEKHY+IEGYLGNAIVDMYAKCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCE+A
Sbjct: 302 LKEKHYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA 361

Query: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY--- 420
           LEMFDSMKAEDGDHKPNR+TFIALLIACSHKGL+AEGRHFFSLMVTKYKIMPDLKHY   
Sbjct: 362 LEMFDSMKAEDGDHKPNRITFIALLIACSHKGLLAEGRHFFSLMVTKYKIMPDLKHYGCM 421

Query: 421 -----------EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 479
                      EAYVMIKTCPFSSCSVLWRTLLGGCR+HR VELGEESFR+LAELEPGKD
Sbjct: 422 IDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRLHRHVELGEESFRKLAELEPGKD 481

[Close]

BLAST of IVF0023556 vs. NCBI nr
Match: XP_038904117.1 (pentatricopeptide repeat-containing protein At5g15300-like [Benincasa hispida])

HSP 1 Score: 858 bits (2216), Expect = 3.27e-310
Identity = 432/519 (83.24%), Postives = 453/519 (87.28%), Query Frame = 0


Query: 1   MIPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSM 60
           +IPKLHRLSS+KELEQAQAFIVK G  NHI IMTKLIAFSSLSPSGSLP ++ALFQETSM
Sbjct: 10  IIPKLHRLSSMKELEQAQAFIVKTGLCNHITIMTKLIAFSSLSPSGSLPHSHALFQETSM 69

Query: 61  DDSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQ 120
           DDSFICNTMIRAYSNSVFPVKALLIYN MQRMDV SDHFTYNFVLK CA AIKCTE DDQ
Sbjct: 70  DDSFICNTMIRAYSNSVFPVKALLIYNHMQRMDVHSDHFTYNFVLKVCARAIKCTEKDDQ 129

Query: 121 CFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVS 180
           CFGHDIISRKGAEIH+R+LKLG DQDHHVQNSLLL+YS  GLV FARLIF+EMT+R+AVS
Sbjct: 130 CFGHDIISRKGAEIHSRVLKLGLDQDHHVQNSLLLMYSACGLVVFARLIFDEMTMRSAVS 189

Query: 181 WNIMMSAYNRVHDYK--------------------------LNNLVAARKVFEEMPERDV 240
           WNIM+SAYNRVHDYK                          LN+LVAARKVFEEMPERDV
Sbjct: 190 WNIMVSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNDLVAARKVFEEMPERDV 249

Query: 241 VSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHES 300
           VSWNSIIAGYVKVKDYK ALELFHSMKQ NIRATEVTFISILGACAE+GALE GKKIHES
Sbjct: 250 VSWNSIIAGYVKVKDYKRALELFHSMKQSNIRATEVTFISILGACAEMGALEMGKKIHES 309

Query: 301 LKEKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKA 360
           LKEKHY+I+GYLGNAIVDMYAKCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCE+A
Sbjct: 310 LKEKHYRIKGYLGNAIVDMYAKCGELHLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA 369

Query: 361 LEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY--- 420
           LEMFDSMKAE    KPNR+TFIALLIACSHKGLVAEGRHFF+LM+TKYKI PDLKHY   
Sbjct: 370 LEMFDSMKAEHDYQKPNRITFIALLIACSHKGLVAEGRHFFNLMITKYKITPDLKHYGCM 429

Query: 421 -----------EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKD 479
                      EAYVMIKTCPFSSCS+LWRTLLGGCRVHR VELGEESFR+LAELEPGKD
Sbjct: 430 IDLLSRWGFLQEAYVMIKTCPFSSCSILWRTLLGGCRVHRHVELGEESFRKLAELEPGKD 489

[Close]

BLAST of IVF0023556 vs. TAIR 10
Match: AT5G15300.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 307.0 bits (785), Expect = 3.1e-83
Identity = 181/527 (34.35%), Postives = 282/527 (53.51%), Query Frame = 0


Query: 3   PKL-HRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMD 62
           PKL     +I+ L+Q  A +V  G  +++ ++ +LI  +SLS  G+L  A+ LF E    
Sbjct: 16  PKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKP 75

Query: 63  DSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQC 122
           D  ICN ++R  + S+ P K + +Y  M++  V  D +T+ FVLKAC+            
Sbjct: 76  DVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKL---------- 135

Query: 123 FGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLV------------------------- 182
                    G   H ++++ GF  + +V+N+L+L                          
Sbjct: 136 ----EWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAW 195

Query: 183 ------YSGRGLVGFARLIFNEMTVRTAVSWNIMMSAYNRVHDYKLNNLVAARKVFEEMP 242
                 Y+ RG +  A  +F+EM  +  V+WN+M++        K   + +AR++F+   
Sbjct: 196 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGC-----LKCKEMDSARELFDRFT 255

Query: 243 ERDVVSWNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKK 302
           E+DVV+WN++I+GYV     K AL +F  M+        VT +S+L ACA LG LETGK+
Sbjct: 256 EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKR 315

Query: 303 IH-ESLKEKHYKIEGYLG----NAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGL 362
           +H   L+        Y+G    NA++DMYAKCG +  A+EVF  ++ + +S WN +I+GL
Sbjct: 316 LHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGL 375

Query: 363 AVHGHCEKALEMFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIM 422
           A+H H E ++EMF+ M+       PN VTFI +++ACSH G V EGR +FSLM   Y I 
Sbjct: 376 ALH-HAEGSIEMFEEMQRL--KVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIE 435

Query: 423 PDLKHY--------------EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRR 479
           P++KHY              EA++ +++      +++WRTLLG C+++  VELG+ +  +
Sbjct: 436 PNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEK 495

[Close]

BLAST of IVF0023556 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 303.1 bits (775), Expect = 4.5e-82
Identity = 178/501 (35.53%), Postives = 262/501 (52.30%), Query Frame = 0


Query: 5   LHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFS-SLSPSGSLPRAYALFQETSMDDS 64
           L R S  +EL+Q  A ++K G       +TK ++F  S + S  LP A  +F      D+
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80

Query: 65  FICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCFG 124
           F+ N MIR +S S  P ++LL+Y RM       + +T+  +LKAC+      E       
Sbjct: 81  FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET------ 140

Query: 125 HDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWNI 184
                    +IHA+I KLG++ D +  NSL+  Y+  G    A L+F+ +     VSWN 
Sbjct: 141 --------TQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 200

Query: 185 MMSAYNRVHDYKLNNLVAARKVFEEMPERDVVSWNSIIAGYVKVKDYKGALELFHSMKQW 244
           ++  Y      K   +  A  +F +M E++ +SW ++I+GYV+    K AL+LFH M+  
Sbjct: 201 VIKGY-----VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS 260

Query: 245 NIRATEVTFISILGACAELGALETGKKIHESLKEKHYKIEGYLGNAIVDMYAKCGELALA 304
           ++    V+  + L ACA+LGALE GK IH  L +   +++  LG  ++DMYAKCGE+  A
Sbjct: 261 DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 320

Query: 305 LEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALEMFDSMKAEDGDHKPNRVTFIALLIACS 364
           LEVF  ++ K V  W A+I G A HGH  +A+  F  M+ +    KPN +TF A+L ACS
Sbjct: 321 LEVFKNIKKKSVQAWTALISGYAYHGHGREAISKF--MEMQKMGIKPNVITFTAVLTACS 380

Query: 365 HKGLVAEGRHFFSLMVTKYKIMPDLKHY--------------EAYVMIKTCPFSSCSVLW 424
           + GLV EG+  F  M   Y + P ++HY              EA   I+  P    +V+W
Sbjct: 381 YTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 440

Query: 425 RTLLGGCRVHRRVELGEESFRRLAELEPGKDGDYVLLSNIYAEEERWDDVERLRKEMISY 483
             LL  CR+H+ +ELGEE    L  ++P   G YV  +NI+A +++WD     R+ M   
Sbjct: 441 GALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQ 500

[Close]

BLAST of IVF0023556 vs. TAIR 10
Match: AT1G06150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 295.0 bits (754), Expect = 1.2e-79
Identity = 168/509 (33.01%), Postives = 262/509 (51.47%), Query Frame = 0


Query: 5    LHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMDDSF 64
            + + S+ K LE A A ++K        +M + I  ++ +    L  A +   +    + F
Sbjct: 780  IKQCSTPKLLESALAAMIKTSLNQDCRLMNQFI--TACTSFKRLDLAVSTMTQMQEPNVF 839

Query: 65   ICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCFGH 124
            + N + + +     P+++L +Y RM R  V    +TY+ ++KA + A             
Sbjct: 840  VYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFA------------- 899

Query: 125  DIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWNIM 184
               SR G  + A I K GF     +Q +L+  YS  G +  AR +F+EM  R  ++W  M
Sbjct: 900  ---SRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTM 959

Query: 185  MSAYNRVHDYK--------------------------LNNLVAARKVFEEMPERDVVSWN 244
            +SAY RV D                            L NL  A  +F +MP +D++SW 
Sbjct: 960  VSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWT 1019

Query: 245  SIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHESLKEK 304
            ++I GY + K Y+ A+ +F+ M +  I   EVT  +++ ACA LG LE GK++H    + 
Sbjct: 1020 TMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQN 1079

Query: 305  HYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALEMF 364
             + ++ Y+G+A+VDMY+KCG L  AL VF  +  K + CWN++I GLA HG  ++AL+MF
Sbjct: 1080 GFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMF 1139

Query: 365  DSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKH-------- 424
              M+ E    KPN VTF+++  AC+H GLV EGR  +  M+  Y I+ +++H        
Sbjct: 1140 AKMEME--SVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLF 1199

Query: 425  ------YEAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGDYV 474
                  YEA  +I    F   +V+W  LL GCR+H+ + + E +F +L  LEP   G Y 
Sbjct: 1200 SKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYF 1259

[Close]

BLAST of IVF0023556 vs. TAIR 10
Match: AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 292.7 bits (748), Expect = 6.0e-79
Identity = 182/574 (31.71%), Postives = 282/574 (49.13%), Query Frame = 0


Query: 2   IPKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMD 61
           +PK   L+ +K+L    A I++      + I  KLI+  SL    +L  A  +F +    
Sbjct: 26  LPKCANLNQVKQL---HAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQEP 85

Query: 62  DSFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACA--TAIKCTEMDD 121
           +  +CN++IRA++ +  P +A  +++ MQR  + +D+FTY F+LKAC+  + +   +M  
Sbjct: 86  NVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKM-- 145

Query: 122 QCFGHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGF--ARLIFNEMTVRT 181
                         +H  I KLG   D +V N+L+  YS  G +G   A  +F +M+ R 
Sbjct: 146 --------------MHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD 205

Query: 182 AVSWNIMMSAYNRVHDYKLNNLVAARKVFEEMPERDVVSWNSIIAGYVKVKDYKGALELF 241
            VSWN M+         K   L  AR++F+EMP+RD++SWN+++ GY + ++   A ELF
Sbjct: 206 TVSWNSMLGGL-----VKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELF 265

Query: 242 HSMKQWN----------------------------------------------------- 301
             M + N                                                     
Sbjct: 266 EKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEA 325

Query: 302 -----------IRATEVTFISILGACAELGALETGKKIHESLKEKHYKIEGYLGNAIVDM 361
                      ++      ISIL AC E G L  G +IH  LK  +     Y+ NA++DM
Sbjct: 326 DRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDM 385

Query: 362 YAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALEMFDSMKAEDGDHKPNRV 421
           YAKCG L  A +VFN++  K +  WN M+ GL VHGH ++A+E+F  M+ E    +P++V
Sbjct: 386 YAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRRE--GIRPDKV 445

Query: 422 TFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY--------------EAYVMIKT 481
           TFIA+L +C+H GL+ EG  +F  M   Y ++P ++HY              EA  +++T
Sbjct: 446 TFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQT 505

Query: 482 CPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGDYVLLSNIYAEEERWDDV 486
            P     V+W  LLG CR+H  V++ +E    L +L+P   G+Y LLSNIYA  E W+ V
Sbjct: 506 MPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGV 565

[Close]

BLAST of IVF0023556 vs. TAIR 10
Match: AT4G18840.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 288.9 bits (738), Expect = 8.7e-78
Identity = 171/502 (34.06%), Postives = 259/502 (51.59%), Query Frame = 0


Query: 7   RLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPS-GSLPRAYALFQETSMDDSFI 66
           R  S+ E++QA AF++K G F+     +KL+AF++ +P   ++  A+++       + F 
Sbjct: 48  RAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFT 107

Query: 67  CNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCFGHD 126
            N++IRAY+NS  P  AL ++  M    V  D +++ FVLKACA      E         
Sbjct: 108 HNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEE--------- 167

Query: 127 IISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWNIMM 186
                G +IH   +K G   D  V+N+L+ VY   G    AR + + M VR AVSWN ++
Sbjct: 168 -----GRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 227

Query: 187 SAYNR-------------------------VHDYKLNNLV-AARKVFEEMPERDVVSWNS 246
           SAY                           +  Y    LV  A++VF+ MP RDVVSWN+
Sbjct: 228 SAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNA 287

Query: 247 IIAGYVKVKDYKGALELFHSMKQWNIRATE-VTFISILGACAELGALETGKKIHESLKEK 306
           ++  Y  V  Y   LE+F+ M   +    +  T +S+L ACA LG+L  G+ +H  + + 
Sbjct: 288 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 347

Query: 307 HYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALEMF 366
             +IEG+L  A+VDMY+KCG++  ALEVF     + VS WN++I  L+VHG  + ALE+F
Sbjct: 348 GIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIF 407

Query: 367 DSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHY------- 426
             M  E    KPN +TFI +L AC+H G++ + R  F +M + Y++ P ++HY       
Sbjct: 408 SEMVYE--GFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLL 467

Query: 427 -------EAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGDYV 467
                  EA  ++   P    S+L  +LLG C+   ++E  E    RL EL       Y 
Sbjct: 468 GRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYA 527

The following BLAST results are available for this feature:

BLAST of IVF0023556 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXF2	4.4e-82	34.35	Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	6.3e-81	35.53	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q56X05	1.7e-78	33.01	Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX...	[more]
Q9LS72	8.5e-78	31.71	Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX...	[more]
O49399	1.2e-76	34.06	Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX...	[more]

BLAST of IVF0023556 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DN16	6.6e-275	92.29	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B5F5	6.6e-275	92.29	pentatricopeptide repeat-containing protein At5g15300-like OS=Cucumis melo OX=36...	[more]
A0A0A0LD95	4.3e-274	82.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728140 PE=4 SV=1	[more]
A0A5A7TL32	7.3e-274	91.91	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1F4H4	7.9e-236	79.19	pentatricopeptide repeat-containing protein At5g15300-like OS=Cucurbita moschata...	[more]

BLAST of IVF0023556 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442325.1	0.0	92.29	PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like [Cucumis m...	[more]
KGN58697.1	0.0	80.57	hypothetical protein Csa_000806 [Cucumis sativus]	[more]
KAA0044223.1	0.0	91.91	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_004137888.1	0.0	86.90	pentatricopeptide repeat-containing protein At5g15300 [Cucumis sativus]	[more]
XP_038904117.1	3.27e-310	83.24	pentatricopeptide repeat-containing protein At5g15300-like [Benincasa hispida]	[more]

BLAST of IVF0023556 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15300.1	3.1e-83	34.35	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	4.5e-82	35.53	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G06150.1	1.2e-79	33.01	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G29230.1	6.0e-79	31.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G18840.1	8.7e-78	34.06	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 288..313 e-value: 0.0017 score: 18.5 coord: 446..471 e-value: 1.0 score: 9.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 215..247 e-value: 3.4E-7 score: 28.0 coord: 317..344 e-value: 1.3E-5 score: 23.1 coord: 288..311 e-value: 0.0029 score: 15.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 212..260 e-value: 2.3E-12 score: 46.9 coord: 315..362 e-value: 2.5E-7 score: 30.8 coord: 62..109 e-value: 1.7E-7 score: 31.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 314..344 score: 8.659485
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 213..247 score: 11.345003
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 62..96 score: 8.593717
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 4..123 e-value: 1.1E-10 score: 43.1 coord: 128..266 e-value: 6.9E-25 score: 89.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 267..405 e-value: 4.7E-23 score: 84.1
None	No IPR available	PANTHER	PTHR47928:SF47	OS11G0114800 PROTEIN	coord: 9..476
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 9..476

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023556.1	IVF0023556.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding