IVF0023476 (gene) Melon (IVF77) v1

Overview


Name	IVF0023476
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	S4 RNA-binding domain-containing protein
Location	chr06: 2537438 .. 2553634 (-)
RNA-Seq Expression	IVF0023476
Synteny	IVF0023476

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCAACGACAACGACCATTGGAGCTCTATGGAGTTTAAGAATAGCATCTCAGTTTTCCAGTTTCCGAAGACCCCTTCCCGTTAATCTCAATAGGCTCTACTTTCACGAGACCCGGTTTCCCTCTTCTCCTCTGGGCACCTCAGGTTTCGATTCGCTTCTTCATCTTTCTCTGTTCTGGAGCAATGCAAAACCCTCTCAATGTTATAGAAAATTATGGATTATTATTGTTTAGTGGGCGGTTTATTCTTAAATTCTACTATGGTTGCTTGCTAAGATCAAAGTATTCGAACACTTACTTCAGGTGATATTAGTTTTTATTGGGTATTAAATGGGATTAATCTTCCGTTTCCTAACCTGGCTATTATGAATTCAATTCCATTTCGAATGAATGTCGTAAGGGGTGGTATTTGTAGCTAATTGAGGATATAAGCGTCAGGAGATGGATGACTTAGGGCGTGCTTAGATTAGCTTTCTAAGTGATTTTGGTGGGCAAAAATGTTTTTCTTAAAAGTTATTGTGTTTGGTAACTTATACTAAATCGCTTTTAGTTAATCATATTGGTTTAAACAGAAACCACAAATGAGCGCCTTGGAACCGCCATTTCCCCTCTCTTCTCCAACGGTTTGTTTGTCCAATGGCGATTTCTTTGCAACTGTCATTTCCACCCTCATTGATCCTGAAATTTTCTCTTCCCTTTTGGAACTTTGCTACCAATTGCGAGCCATTCACCATGGTATTCGGATTCATCGCTTAATACCCACCAATCTTTTAAGCAGAAATGTGGGTGTTTCTTCTAACTTCTAAGCTTCTTCGTCTGTATACTTCTTTTGGGTACATGGAGGATGCACACCAGGTGTTCGACGAAATTGGTAATCATAATTTCTCTGCACTTGCTTGGAATTCTCTTATTTCTGGATATGCTGAACTTGGTCTTTATGTAGATGCTCTGGCACTTTACTTTCAAACGGTGGAAGAAGGTGTTGAACCTGACCATTTCACTTTTCCTCGTGTGCTCAAGGCCTGTGGTGGCATTGGGTCGATTCAAACTGGAGAGGCGGTGCATCGGCATGTTGTTCGTTCTGGCTTTGCTGGACATGTCTTTATCCTCAATGCTTTAGTTGACATGTACTCCAAATGTGGTAGCATTGTGAGGGCTAGGGAAGTGTTTGATCAAATTGTTTATAAGGACATTGTTTCCTGGAACTCAATGCTAACTGGTTACACGCCATGGGCTTCACTTTGAGGCATTAGACATCTTTGATCAAATGATTCTAGAAGGCTATGAGCCCGTTGCTTTGTCCTCCCTTTTTTCTAACATTTCATCACTGAAATTCAAGTTACATATCCATGGGTGGGTAATTCAACATGGAGTCTAATGTAATTTGTCCACTGCTAACTCCTTGATAGTCATGTATGCCAACTGTGGTAAGCTTAACAGAGCAAAATGGCTGTTCCAGCAAATGCCTCAAAAAGACATAGTCTCATGGAACTCCATAATCTCTGATCATTTCAATACCGCAGAAGCTTTGACATATTTCAAAGTGATGGAAAACCTTGGTGATTTGCCAGACTGCAACATTTGTGTCATTCTTGTCAACTTGTGCTCATCTTGGGTTGGTGAAGGAAGGGGGGAAATTGTATTATTTGATGAAGGGGGAGTATGGAATAAAACCAACAATGGAACATTATGCTTGTATGGTGAATCTTTATGGGAGAGCAGGGATGATTGAAGTAGGCTATAAAATCATAACGAAAGGGATGGAGATCAAGGCAGGTCTGAAAGTATGGGGGGCACTGCTGTATGCATGCTATCTCCATAGCAATGTAGATATCGCTGAGATTTCTGCTGAAAGACTCTTCGAATTGGAGCCAAATAATGAGCTCAATTTTGAGCTTCCGATAAAGATTTATGACAATGCCGGGAGATCAGAAGACGAGAAGCGAGTGAAATTAACGACGACAGAATGGGGACTTAGTGTAGATAATATGTGAAATCCATTCACACTCATGGATGGATAATGAATTCATCTGGATAGATCACAGGTTTAGTGTGAAGTTAATATGAGAATTCACAGAGAGTTGGAAATGGATTCCACTAAGAGTAAAGCATTCAATGCCAGAAGCTCAAGACACACAAGCTTGCTGATTTTTTGTGGAAGACCTACTTCTACTTCTTTTGATCTCTATAGGAGTTTATTTTTGGGCTTGTTTTGGAACTGTTTATCTCCTGTTGTTCTTTACTTTCTGTTTTGTATTTGTGTTGGTTGTTTTGGTTTAGTTGGAGTTTCAATGTTTTTGGATGTTCAATTGGATATGATGGTGGCACTAAAGGGGTGTTAACCTAATTGAGATGTCTGGATGCACCTTTTGATCCCGGTCCGGAAGTGAGCTTCTGACAACTAGCTTCTACCCCTTGGACTTGGAAGCAAGCTAGAGCTACTTCAATCAATGAATGAAAAGAAAGTGCTTACGAATGGAAAGGGAGGACAGGTTGGTTCGAGGACCTGTTGGTCAAAGGAAAGGGGAGGTCTTGATGTCGAGACGGAGCCGTATGAGGCGAGAGTCTCTTGTACGGTAACTTACTTAAAGAGGAAGAGAACTCAGGGTCAGACATCAGGCCATTCAATTACCCATTTCGGAACAGCTGAAGAGGCCAAAGGTTTCAGAAGTAGCCTCTTGCAGCAGAGGTTCAAATATCGAGACCATCGCCCAAGCGAGGCATCCCTTTCAGTCTTTCTTATCGTTGAAGCTACTGCTCCAACCGCTATTGACCATTCCCAAGTCAAATATCAAGGAAAGGCTGAAAACTCTTTTGACTCTTTCCCCCTTTGTTTCTTTTAGTTGTCTCATTGAGAATAAAGTCAAAGACTTTGTGGTCTAGAGGCTTGACTAAATCAATGAACAAGGGCTCGACTGAAAGGAGAGAAGTCAGAACCATTAGATTTAGAGGTCTCGAAATGAAAGACGTTTGGACGCTCTAATCTATGGTTTTGGTCTATAAGAGGACCAAAAAATAGCCGAAGATCAGAATTTGATTATCGACTACTTATTAGATTTCTATCTTTTGATTTCATTCCCTAGATCCTCCTTTTTGCTTCTTTATTGTTCTCATAATATAATTCTCTTGTACTTTGAGTTTTATTTTAATAAAGAAGCTCGTCTTTGTTAAAATGGTTTAAAATCATTTCTTAAAGTGGATAATCCCTAAAGTGATCGACCAGCAACCACTGTATGTGATTAAGTACTTATAGAATTACTTTTAAATGTAGTGCAACTAAACAACTTTTGTTTAAAATGTCAACCAGGACTTTAATTGTAATCATTTTTGCAGACAATGTTTTAAGAAATATGCTTTCTTAAAAGTGTTTAAATTATAAGGTATGCTTTCATTTAGCGCAATGTTTACTACTGTATGAAGTGGCTGCGGCATTACGCTTGCGCAGTAATGGTTAGAGATGTTTTCTGAAGGGGTGCCTATTGGGTTTGAGGCCTCCACCTTCGTGTTGAAAACATAGTAACTTAGTATCCCTGTTGTCTATTGAAGCCCATGTGGGGCAGTTGATACCTCAAATACCAGAAAAGGAAAATTATATGTTGAACTTGCAGATAAAACGTAATAAATTATGAGTAAAATAACCTTGATTTGGAAAAAAAGTACTTCCTCTTATACTATGTATCCACCAGCCTGTCTCCTACATCTATCAAATCCTTAAATTATGTCACTTGCATTAAAAGTCAAAAAAATGAACATGCTGTACATGAGATAAGGGAAAAGATAAGTAATTCTTCTAATCCTGAATGTTAACCCAAGTATTTTTACTCATACGTTTCAATAGTTGCATGTTAATAATCATCCAAATGTGATTTCAGGAATATGCCAATTAGTGCAAGCTGTAAAGGGAGATATTGATGTTTTACTCAATGGAGTTGGAGATAAAGGTGTTATTGTAGACGTGAAACAAATTCTTGTGATGGTATTGCCTGATAAACTTTTAACGACATGTTAGTATGAAAGACTAGAGCTTTAACCATCTCGTTTCACTGTATTTTCTTTTACCTTGCCTTCTTTATTCATGTTGTGAAGACTGAATTAGCACGACTCCACAAATTTCTATAGATTTATAGGGAAAAGGCCAATCCTTTTTCTTCCCCTTTTATTCTGATGAAATTTGCATAAGAAACGTCAATATAGGAACCCTTTTGTCTCTTGGTCGTGACTTGTGAGGGATGATTTTGGTTCTTAACATCTTTTGGTTTCATCTAGGCTAAACGTTCATTATCAAGACGAGAAGTTCTCCATACAAACTTTCTTACCCCACCTGTGGTGAAAGAGTCAATGCTAGCTATTCAAAAATTAGCTGACGTGAAAGCAATAGCTCAGGGAGGATACCCAGAGGTGAAAATATAGAAGTCTCGTTTGTTTTCTTCAGTTAGGGCTTGAGTATATGAATCTAAGATATGTTGCTGATAACGCATGCCTTTCAAGTTGCCAAAATTTTCAGGCAGAGCGCTGCCGGATTTCTGTTGGTCACTCAGATGAACTAACAAGTGATCCAGACATAATTTCAGCATTGAGGTATCGTTCTTTAATCTATCACTTTAGTCCATTTATTTGAGCGGTGGAATGAATTACTCTTTTGTTGTTCCTAACTTTCTTCTTTCTGAAGGGTTTTATTTTTTTCTTTTACTAGTATCACAGGAAATTTTACGTTTCACCCTTGTTCACATGGGGACTTCCTTGGATCAATTCTTGGTACTGGCATTGCTAGAGAAAAGCTTGGTGATATCATAATCCAGGTATAATCATATAAAATATGAAGTATAATTACAACTATTTTGTTCTCATTCTTACTGCACGTTTGATGCTTCACGTGCTGCCATTGATGGCTTCTTTTTAATGGTGTGTTGTCTTATAATGATTATTTGAACTTGTGACTGATGAAGTGTTATAAATGCGTAAAACTTTGGTCATCTGTAGGTTGGTTTTATTTTATGTTGAGAACTATAATTTTCTTTGTCAAATCCCAAAAACTGATGGTAAAAGTTTTGTTTTGGGTTATCATGCGCTTGGTGCATCCCGCAGTGACCAAAAGTTTGGTCAGAAATGTGGGCATATACATTTTATTTATTTATTTCATGTGGAACAGAACTTATGAAAAAGATTCAATTTCGATAAATACTACGTCTAACTGCATTCCTTGTCTGTTTCCAGCGGTAGTTTTGTGTAAATTAAAAATTGCCACCTGGCCATCATGGGCCAGATTTCTCTTATTCTCTTAGCGTTCCCTTGTTTTCAGGAAGAAACGGGAGCTCAAGTAGTCATTGTTCCAGAACTTGTTGACTTCCTGATATCATCACTGCGCAAGGTAGTGTCATTATCTTGGGTGGTTGCTTCTAACATGATGTTACATAAATTAATATGCGAATGAAAAAATGTTTTACCTCCGACTGCATTTCTTGCGTGTATTAAGGTACATATTGGTGAAACCTGCATGGCCTAATGGATAATCAAACTTTCTGAAAATCTTCTTCCTCTATCTCTTTATTTGTCATGGCATTCTTAATGTCAGGTTGGCAATGTCACAGTTTCTTGTACGAGGATTCCATTGACAGCTCTTGAATATGAACCACCGAAGTATGAGTTTATGTTGGTAAATTTTCATATAGGTTTATGATTATTTTTAATGTTGTGTTTTCTTCTTTCATTTGCAGGACTAAGACATTTAAAACCATTGAGGCATCTCTTAGGGTGGATGCTTTAGCAAGTGCTGGATTCAAGATTTCACGATCTAAACTAGTGGATTTAATCAGGTGGGCTTCTGGTTTTCTACTACCAAACCATATTTTATTGAAAGTGATAAAAAGGAAATATGATACCAAATTACGTAGAAATCGAGAACCAAGAGAAAAACTACGATTTGACTTATTAATTTCTCATATTTATAAAAGGTACAATAGGGAAAATAAATAAACAACAAGCTTAATGTAAAAAAGAAAGAATATTAGGGTTCATGTTTCCTTGGGCTCAAGCCTACTAATTCTAACACTCCCCTTCAAGTTGGGACGTAAATATTTATAAGGCCCAACTTGCTAATACATGAATTATAGCTTTGTTTAAAAAGCCCCTTGGTGAGGATATCAGCAACCTATTGACTTGAGGGGATATAAGGAATGCATATTGTTAGAATTAGTACTTTTGGAAAGAATAAAATATACTTTTGGAAAAAATAAAATATAAGATTTTATTTCCTAAATATTTCCTAAATCTTTTCCTTTCTTATTCCTATTGTACTCTATTTATACTCCCTTTGTACCTATTGTTTTTGTTCATAAGAAAAATAATAAAAACTAAAGTATCGTGGTTTTTCTCCCGGTTCTCGGGTTTCCACGTAAGTCTCGGGTTGTTGTTAATTGCTTTCAATATGGTATCAGAGCAAAGCAATAACGAAACCCTAGAAAATAACCTGGGAGAAACCCAGATCGAAACTGACCCCGTCACCGCCGCCGCCGCCGCCGCCGCCGGAATCTCCGCCGCCGTGGACGCCGCCGTCGCCGCCGCCATGGAGAAACTGCTCCAGAACCTACAGAAACCGCCGATCTACCCAACGGGAGTGGTTCCGCAGCCGTACGCGCCGCCGTTTGACCAGAAGTTGATTCACGCGCCGCTCGTGTCCGGCGCGTGGGCCCACGCGCCGCCGCCGTTTCACGTCACCGCCCATCCCGTTCCCTTCTACGCGCCGTCGGATGTCCAGCCGTCAAACCCTTCCGGCCATCCGCATCCTCATGCGCCATCTACGAGCTCCGGACAGCATCCCTCAACCGTAAATCTGTCAAATCAGTATAGTAAGCAGCAGCTGTACGTTGACCCTTTACAGCAACCGCTGTTTTCTGGTAACGGAATTGATCAACCCCAAAACAGATCGGACATTGAAGCGGGCGAATCTTCAACGCATTCCAAACCAACCGAGTTGCCGATGTATTCCAAGAACCCGGTAACTTCGTTCCCTAATTCACAGTCAAATTATATAACTGGCTCTTTGGGTTCGTCTACAGGGAATTTTTCAGGCGAAAAATTAAATGGTCAAAATTATTTTTCTTGGTCACAATCAATAAAGATGTTCCTCGAAGGTCGATACCAGTTCGGATTCTTAACTGGAGAGATTGTACGTCCTCCACCAGGAGACGCCTTGGAACGACTCTGGAAAGGAGAGGACTCACTTATTCGGTCCATGCTGATTAATAGTATGGAACCACAGATCGGCAAGCCTTTACTATATGCAACCACAGCAAAAGATTTGTGGGATACAACTCAGACCCTTTACTCGAAACGACAGAATGCCTCTCGGTTATATACACTGCGAAAACAGGTCCATAATTGCAAACAAGGGACCCTGGACGTAACTACCTATTTTAACAAGCTCTCTCTCCTCTGGCAAGAGATGGATTTGTGCAGAGAGACAGTTTGGGACACACCAAATGACAGTACACAATATGCTAAACTTGAAGAGGCTGACCGTGTTTATGACTTCCTTGCAGGACTTAATCCCAAATTTGATAATGTTTGTGGTCGTATACTCGGACAAAGACCTCTTCCCTCCCTAATGGAAGTTTGTTTTGAAGTCCGCCTGGAAGAGGATCGCACTAATGCCATGGGTGTATTGACTACCCCTACCATCGACTCCGCAGCCTTTAGCGCTCGGTCCTCAAATCATGACAGTGACAAGAATAATGGGAAGTCAATTCCTGTGTGTGAGCACTGCAAGAAACAATGGCACACCAAGGATCAGTGTTGGAAACTCCACGGTCGTCCCCCAGGAGGTAAGAAACGATCCTCCAACGAGAAACAGAACTCAGGACGTGCCTACATTAGTGAGACTACACCTGCTAGCACTTCTCAATCAACTGATCCTACTGTGAGCCAGACCAAGACTCCGACTCTGGGTGCCATTGCTCAGTCAGGTATGCCTCAGTCCCTTGGGCTTATTAGCGTTGATGGGAAGAATCCCTGGATCTTAGACTCGGGGGCTACAGATCACTTGACAGGTTCTTCAGAACACTTTATCTCATATGCCCCGTGTGCCGGTAATGAAAAAATCCGAATAGCCGATGGCTCTCTAGCTCCGATCGCTGGCAAAGGACAAATAGTTCCCTTTGACGGTTTTGCTCTCCAGAATGTTTTGCATGTCCCTAAACTGTCTTACAATTTGTTATCTATAAGCAAGATCACTCGTGAGTTGCATTGTAAAGCTATCTTCTTACCTGAATCGGTTTATTTTCAGGACATGAGCTCGGGGAGGACGATTGGCACTGCCCGGCATAGCAGGGGACTTTACATCCTTGATGATGATACCTCATGTAGTAGTTTGTCTAGGGTTAGTTTACTGTCATCCTACTTTAGCACTTCTGAACAAGACTGTATGTTGTGGCATTTTCGACTGGGCCACCCAAACTTTACATATATGCAACATTTATTTCCCCACCTTTTTTCTAAAGTTGATGTCTCTTCTCTATCTTGTGATGTGTGTATCCGGGCAAAACAACATCGAGTCTCTTTTCCCTCACAACCATATAAACCTACACAACCGTTTAACCTCATCCATAGTGACGTTTGGGGTCCTTCCAAGGTCACCACCTCCTCGGGAAAGCGGTGGTTTGTAACTTTCATTGATGACCATACCCGTCTCACCTGGGTCTACCTTATCTCAGATAAATCCGAGGTTCCATCCATTTTCCAAAACTTCTATCATACTATCAAAACACAATTTCATACAAAAATTGCAATTCTTCGAAGTGATAATGGTCGGGAATTCCAAAACCATAACCTTAGTGAATTTCTAGCCTCCAAGGGGATTGTTCACCAAACCTCATGTGCCTACACTCCTCAACAAAATGGAGTGGCCGAACGAAAAAACCGACACCTTGTGGAAGTAGCCCGTTCACTTATGCTTTCCACTTCCCTTCCATCATACCTGTGGGGAGATGCTATTCTTACAGCTGCTCACTTAATCAATAGAATGCCTTCTCGTATCCTCCACCTTCAGACTCCCTTAGATTGTCTTAAGGAGTCTTACCCCTCTACTCGTCTTGTTTCTGAGGTTCCTCTTCGTGTGTTTGGGTGCACCGCCTATGTCCATAATTTCGGCCCTAATCAGACCAAATTTACCCCTCGGGCTCAGGCCTGTGTGTTTGTTGGGTATCCCCTTCACCAACACGGTTATAAATGTTTTCACCCGCCGTCTAGGAAATATTTTGTCACTATGGACGTTACTTTCTGTGAAAACCGACCCTACTTTCCTGTTAGCCATCTTCAGGGGGAGAATGTGAGTGAAGAGTCTAACAACACCTTTGAATTTGTTGAACCTACTCTTATTACCGTGTCTGACATTGATCCTCATCCCATAATCTTACCCACAAACCAAGTTCCCTGGAAAACATATTACAGGAGGAATCTCAGAAAGGAAGTTGGGTCCCCTACTAGTCAACCGCCGGCTCCAGTCCAAAATTTCGAACCTCCTCGAGACCAAGGTATGGAAAACCCTACAAAACCTTGTACTAATAATACAATGAGTGAGAATGACAAGTCTGATATTGCTTTTCTTGAAAATATGGAAGAAAAGAACTGTGATGATGAGACTGAGGTTAGAATAGAAACCAGTAACGATGAAGCTGAACAGGGTCATACAAGAAAACTTGATGAGTATGATCCCTCTCTTGACATTCCAATTGCATTGAGAAAAGGTACCAGATCATGCACTAAACATCCCATTTGCAACTATGTTTCCTATGATAATCTCTCTCCACAGTTTAGAGCGTTTACAGCAAACCTTGACTCTACCATAATACCGAAAAATATCTACACTGCTCTAGAGTGTCCTGAATGGAAGAATGCTGTTATGGAAGAGATGAAGGCTCTCGAAAAGAATAGAACTTGGGAGATCTGTGCTCTACCCAAGGGACATAAAACTGTAGGATGCAAATGGGTATTCTCTCTCAAATACAAAGCAGATGGTACGCTTGATAGACACAAGGCAAGGTTAGTTGCAAAGGGGTTCACTCAAACCTATGGTATTGACTATTCGGAAACTTTTTCTCCAGTTGCTAAATTGAATACTGTTAGAGTCCTGCTATCTGTTGCTGTGAACAAAGATTGGCCTCTATACCAGCTGGATGTTAAGAATGCTTTTTTGAATGGAGACCTTGTGGAGGAAGTCTACATGAGCCCCCCACCAGGATTTGAAGCCCAATTTGGTCAGGAGGTGTGTAAACTCCAAAAATCTCTATATGGTCTGAAACAGTCTCCGAGAGCATGGTTTGACAGATTCACTACCTTTGTCAAGTCCCAAGGGTACAGTCAAGGGCACTCTGACCATACTTTATTTACAAAGGCTTCCAAAACAGGAAAGATAGCTATTCTAATTGTTTATGTGGATGACATTGTTTTGACTGGAGATGATCAAACAGAAATCAGTCAACTAAAGCAGAGAATGGGTGATGAATTTGAAATCAAAGACTTGGGCAATCTGAAATATTTCCTTGGAATGGAGGTGGCTAGATCAAAAGAAGGTATTTCCGTGTCTCAGAGAAAATACACCCTTGATTTGCTAACCGAGACAGGTATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCCGGATATTTCCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCTTGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGGATCTGTTATTGATAGAAAGTCTACATCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGAGGCTGAATACAGAGCTATGAGTCTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCTTGTCAGATCTTCATCAGGAATGTGAGACACCATTGAAGCTTTTTTGTGATAATAAAGCCGCTATTAGTATTGCTAACAACCCAGTGCAACATGATAGAACTAAACATGTTGAGATTGATCGGCATTTCATCAAAGAAAGACTTGACAGTGGAAGCATATGCATTCCGTACATTCCTTCAAGCCAACAGATTGCTGATGTTCTTACCAAGGGGCTTCTCCGACCACACTTCGACCTTTGCGTTAGCAAGTTGGGACTCATTGATATTTACCTCCCAACTTGAGGGGGAGTGTTAGAATTAGTACTTTTGGAAAGAATAAAATATACTTTTGGAAAAAATAAAATATAAGATTTTATTTCCTAAATATTTCCTAAATCTTTTCCTTTCTTATTCCTATTGTACTCTATTTATACTCCCTTTGTACCTATTGTTTTTGTTCATAAGAAAAATAATAAAAACTAAAGTATCGTGGTTTTTCTCCCGGTTCTCGGGTTTCCACGTAAGTCTCGGGTTGTTGTTAATTGCTTTCAATACATATGCTATCACTATCCAATCTTTCTTTAATAAAGTGTCTATCAATCTCCACATGTTTAATTCTATCATGTTGAACTAGATTGTTAGCGGTGCTAATAGCTGCCTTATTATCACATAATAATTTCATCAGCATCTCATAGTTCTAAAGAAGGTCAGATAAAACCTTTTGCAGCCAAATTTCCTTACATATCTTCAAACTTATAGCCCTATACTTAGCTTGGACACTGCTTTTGGCCGCAACCCCTTACTTCTTACTTCTCCAAATTACAAGATTACGCCATACAAATGTACAATAGCCAAAGGTGGATTTCCTGTCAACAACAGACCCTGCCTAGTCAAACTTAGTATAGGCCTCACTAGCTCTATTGTCGATCTTCCTGAACGTCAACCCTTTACCAGGAGTTGTTCGTAAGTACCTCATAATTTTGTTGACTGCCTCTGTTTGTTCCTCATATGGAGCTTGCATGAACTAACTAATGACACTCACAACATAGGAAATATTCAGTTTAGTGCGTGATAAGTAGATTAACTTTCCCACAAGGCGCTGATATTTTTCTTTATCAACTAGAACTTTATCACCAGAATTTCCTAGTTTACAGCTGAACTCAATAGGAGTATCAGCAGGAGAACATCCTAACATACTTGTTTCGGTTAGCAAATCAAGGGTATACTTCCTTTGAGATACAAAAATACCTTCTGTTGATCTAGCTACCTCCATCTAAGGAAATACTTTAGATTTTCCAAGTCTTTAATCTTAAACTCATCACCCATCTTTTTTTAGTTGGATAATCTGAACGTGTCATTCTCAGATAATTTAATGTCATTAACATAGACAATCAACATGATGATCTTCCAGGCTTGGTGACTTTCGTAAACAAAGTGTGATAAGAGTGCCCCTGATACAACCTTGGGACTTGACAAAGGTAGGAAACCTATTAAACCATGCTCTCGAGGACTGTTTTAGCCTATACAAGGATTTCTAAGTTTGCAGACCCATATGATCAAACTGGGCTTCAAATCCTGGAGGGGGGCTCGTATAGACTCTCTTCCAAGTCTTCATTCAAGAGCGCATTCTTAACATCTAGCTGATATAGGGGTCAATCTTTATTCACAACAACAGATAACAAGACTAATGGTATTCAATTTTGCAACTGGAAAGAAGTTTCAGAATAATCGACCCCATAGGTCTGAGTGAACTCTTCTGCATCTAACCTGGCCTTGTGTCTATCAAGAGTTCCATCTTTCTTGTATTGGGTGTAAACACCCATTTATATCCCACGGTTTTATGTCCCTTAGGGAGAGTACAGATCTCCTAGGTTTTGTTCTTTTCAAGAGGTTGTTTAGCCCGAAGACACATCACAATATAAAGAGGAGACATTAACTTTAGAGAAGAGGTGTGGAAATAAATATTTCATATATTGAAAATTTGGGTGGCCCAACTAGAAATGCCACAACATACAATCTTGTTCAGGAGTAGTAAAGTATGAAGAATATAAATTAGTCCTAGAGTTACTACCAGTGGAGGTATAATCGTTAGGGAGGTAAAGCCCTCTAATATGCTAGACAGTGCCAATCGTACTCCCTGAGCTCAAGTTCTTAAAAGAAACAGAATCAGGTAAGAAAGCAGCTTTGCAGTTTAGCTCATGAGTAATATTGCTTATAAATAGCAAATTATATGAAATCTTAGGCTCATCCAACACATTTATGGAGAGGTAGCCCCTCAAAGAGAAAAAATTTCCCCTTTCTAGCCATTGAAGCCAAGGAACCATTGGCTATTTGGATTTTCTCATTACCGGCACACAAAATATAAGAAACAAAATTCTCAAAGGAATCTGTCAAGTGATCTGTAGCACCCGAGTCTAAGATCCATGGAGTCTTCCCATCGACGCTGATAAGATTAAGGGACTAAGGCATACCTGACTAAGCAATGGCTTCTAGGGTGGAGGGTGGACTGGGATCGTTCTGGTTTATGGTAGGACTAGGTGGTTGAGAGGTTTTAGCAGACTCTCAAATAAGCATGGCCTGAATTATGTTTATCATTTGAGGAACGTTTCTTACCTCCTAGAGGATGACCATGTAATTTCCAACACCGATCTTTAGTGTGCCACTGTTTCTTGCGATGCTCACAAATAGATAAAAATCGGTTTTCTATTGTGCTTCTCACTATCATGAGTAGAGGATCTAATATTGAAGGCAACGGAATTAGTAGTAGGAGTAGTAAGAACATTCATGACACTTGTACCATCTTCTTTGAGACGGACTTTAGAACACACTTCATTAAGGAGGAAAGAGGTCTCTGGCCAAGTATACAACCGCGAACTACATCAAACTTGGGGTTGAAATCTGCAAGGGAAGTCATCAATCTGGTCAACCTCTTCAAATCTAGCATACTGTATGTCATCATGCGGACTATCCCAAAGGATCTGTCTGCACAGGTCCATCTTTTGTGAAATTAGAAAAGTTTATTAAAGTGGGAGATTACATCAAGAGTACCCGGCTGCATTCATGGACTTGTTTTCTAAGTGTATACAGATGAGAGGTATTTTGACGCTTCGAATAAAGTTTTTGAGTAGTATCTCATAGATCCTTTGTAGTTGTTGCATATAGCAACGACTTGCCAATTTATGGTTCCATACTATTGATCAACATGGCTCGAATAAGAGAATCCTCCCCTCTCCAGAATCATTCCTGGGAATCATCGAGTGGGGGATAGAAGAATCTCTCCTGTCAGAAACCAAAATGGTGTCATCCCTCAAGAATCATTTTGACTGATTGTGACCAGGAAAAATAGTTCTAGCCATTTAGCTTTTCCCCTGGAAAGACACTTGTAGATGGTGTTCTATAATTAAATGACAAAATAGAGGACGAAGTTACCGGGTTCTTGGAATACATAGGCACATCATTTGGTTTGGATTAGGCCGAAGATTCACTAACTTCAAACCCTGATTTAGTATGGAACTGATCAATCTCGAGACCGAGGATGTGCAGCTGTTGTAACAAGTCAGAATGCAGCAACGCGTGAAAAGAGGGCAACGGTTGTGCATGGACGTAGGGCTCCGGCTGGATTTGCGGCACATGGATGGGTGGCTGAACAAAAGGGATCTGCAGCTGGGCAGAGGAGAACAAAAGGGGCTGGACTGGTTGAACGACAGAGTGGATTGGCGGTGGGGCATGGACAAAGGCGCTTGGCAGCGGTGGCACGTGGAAGGATTTGCTTGGTGCGTGCGCTGTAACCTCCATTAGGCAGTGTGGTTAGCTGCAGCTGCGAGGGTTGGCTAGGGCTACTCACCGGCTATTTCTGAAACTGAAGGAGTAGGTTGTCCATGGCGGCATGACGACATTGATCCCAGCGGTGGCTGTCTCGTTGTTGTCCTCTGTTTGAGTTCCATTAATATTGGTGTCTAGTGTTTTATCGTTATCCCAGTGTCAATCATTTAATACGAAGGATTCAACTTTTTGAACAAACAATTTGAAGAACTATTGTCTAAGTTTCAATCCCTAAAGAGAAAATGAACAATTTATATCAAACTTTTTATGTTGTTGAATCTTACACAATAGTGCTTCCCTTCTATTTTCCATTTTTACTAGTGGATTAGAATTGACTTGATCTCAAACTTTACACCTTATGCTCAATACCAATGAAAGCATCTGAGCCTACATTAATTGGGTGATACATGACAGATCTTAATAATGGATAAGTTTCCTTTTATCTTCTGTTGATTTGCCTGTTTGAACATAATCTGAAACTTTAGATATCATTTGTAGTATCTGTAGATGGGTTACATCGTGCCTTCATATAACAATGAATGATTAATACACAACTTTTTTAAAGTTTCTGGGAAATAAGGTGTTGCAATACCTTATCTCCTCTTTCTTTTGTGAAAGTATATTAACCTGAAATTGTTACATGAGCAGTAGCGGGGATGTTCGTGTCAATTGGACGCCAATTACAAAAAATGGAACCATTTTAAAGACTGGTGATATTGTTTCTGTTAGTGGCAAAGGGAGACTAAAGGTGAGTTTTTTCAATTGAATCGAAACAAAAACTAGTTGCAGCGAGTTCATAAATTTTTTAGCTTAGAATTTCCGACTTCTGATTATTTTCCTCATATTCAGATTGGAGAAATAAATTCAACAAAAAAGGGAAAATTTGCTGTTGAGCTTATCAGATATGTGTAAGCTCTAGAGATACTGTCAGTTCATAAGACGTCACAGGAGCCTCTTTGTCGGGGTGAAATCAGGATTGTTTCCTTAGGAATAACTGAAGTAAGTCAACATGACATTAATCTGATTGTATATGTGAAAATACAAACACCCATTCATCCATTCTTAAAATTTCATCGGGAAAATCTGTCTCAGCATTTCAATGCCAGTGCTTTATAGTTCTTTTGTTTCTGGTTGTGTTGCCTTCTTTTCTGGAATGAATTCGTTCATACTAATGTTGTCAAAGGAGGGAATTTAGGCGCAAAGTTATAGCTTCACTGTAACTATTTGTTTATTCAATGATTTACCTCAACTCCATCCCCTAATATGCTGTTATTATTGTTGTGTATTACTTGGTG

mRNA sequence

ATGGCCGCAACGACAACGACCATTGGAGCTCTATGGAGTTTAAGAATAGCATCTCAGTTTTCCAGTTTCCGAAGACCCCTTCCCGTTAATCTCAATAGGCTCTACTTTCACGAGACCCGGTTTCCCTCTTCTCCTCTGGGCACCTCAGGAATATGCCAATTAGTGCAAGCTGTAAAGGGAGATATTGATGTTTTACTCAATGGAGTTGGAGATAAAGGTGTTATTGTAGACGTGAAACAAATTCTTGTGATGGCTAAACGTTCATTATCAAGACGAGAAGTTCTCCATACAAACTTTCTTACCCCACCTGTGGTGAAAGAGTCAATGCTAGCTATTCAAAAATTAGCTGACGTGAAAGCAATAGCTCAGGGAGGATACCCAGAGGCAGAGCGCTGCCGGATTTCTGTTGGTCACTCAGATGAACTAACAAGTGATCCAGACATAATTTCAGCATTGAGTATCACAGGAAATTTTACGTTTCACCCTTGTTCACATGGGGACTTCCTTGGATCAATTCTTGGTACTGGCATTGCTAGAGAAAAGCTTGGTGATATCATAATCCAGGAAGAAACGGGAGCTCAAGTAGTCATTGTTCCAGAACTTGTTGACTTCCTGATATCATCACTGCGCAAGGTTGGCAATGTCACAGTTTCTTGTACGAGGATTCCATTGACAGCTCTTGAATATGAACCACCGAAGACTAAGACATTTAAAACCATTGAGGCATCTCTTAGGGTGGATGCTTTAGCAAGTGCTGGATTCAAGATTTCACGATCTAAACTAGTGGATTTAATCAGTAGCGGGGATGTTCGTGTCAATTGGACGCCAATTACAAAAAATGGAACCATTTTAAAGACTGGTGATATTGTTTCTGTTAGTGGCAAAGGGAGACTAAAGATTGGAGAAATAAATTCAACAAAAAAGGGAAAATTTGCTGTTGAGCTTATCAGATATGTGTAAGCTCTAGAGATACTGTCAGTTCATAAGACGTCACAGGAGCCTCTTTGTCGGGGTGAAATCAGGATTGTTTCCTTAGGAATAACTGAAGTAAGTCAACATGACATTAATCTGATTGTATATGTGAAAATACAAACACCCATTCATCCATTCTTAAAATTTCATCGGGAAAATCTGTCTCAGCATTTCAATGCCAGTGCTTTATAGTTCTTTTGTTTCTGGTTGTGTTGCCTTCTTTTCTGGAATGAATTCGTTCATACTAATGTTGTCAAAGGAGGGAATTTAGGCGCAAAGTTATAGCTTCACTGTAACTATTTGTTTATTCAATGATTTACCTCAACTCCATCCCCTAATATGCTGTTATTATTGTTGTGTATTACTTGGTG

Coding sequence (CDS)

ATGGCCGCAACGACAACGACCATTGGAGCTCTATGGAGTTTAAGAATAGCATCTCAGTTTTCCAGTTTCCGAAGACCCCTTCCCGTTAATCTCAATAGGCTCTACTTTCACGAGACCCGGTTTCCCTCTTCTCCTCTGGGCACCTCAGGAATATGCCAATTAGTGCAAGCTGTAAAGGGAGATATTGATGTTTTACTCAATGGAGTTGGAGATAAAGGTGTTATTGTAGACGTGAAACAAATTCTTGTGATGGCTAAACGTTCATTATCAAGACGAGAAGTTCTCCATACAAACTTTCTTACCCCACCTGTGGTGAAAGAGTCAATGCTAGCTATTCAAAAATTAGCTGACGTGAAAGCAATAGCTCAGGGAGGATACCCAGAGGCAGAGCGCTGCCGGATTTCTGTTGGTCACTCAGATGAACTAACAAGTGATCCAGACATAATTTCAGCATTGAGTATCACAGGAAATTTTACGTTTCACCCTTGTTCACATGGGGACTTCCTTGGATCAATTCTTGGTACTGGCATTGCTAGAGAAAAGCTTGGTGATATCATAATCCAGGAAGAAACGGGAGCTCAAGTAGTCATTGTTCCAGAACTTGTTGACTTCCTGATATCATCACTGCGCAAGGTTGGCAATGTCACAGTTTCTTGTACGAGGATTCCATTGACAGCTCTTGAATATGAACCACCGAAGACTAAGACATTTAAAACCATTGAGGCATCTCTTAGGGTGGATGCTTTAGCAAGTGCTGGATTCAAGATTTCACGATCTAAACTAGTGGATTTAATCAGTAGCGGGGATGTTCGTGTCAATTGGACGCCAATTACAAAAAATGGAACCATTTTAAAGACTGGTGATATTGTTTCTGTTAGTGGCAAAGGGAGACTAAAGATTGGAGAAATAAATTCAACAAAAAAGGGAAAATTTGCTGTTGAGCTTATCAGATATGTGTAA

Protein sequence

MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFPSSPLGTSGICQLVQAVKGDIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIGEINSTKKGKFAVELIRYV

Homology

[Close]

BLAST of IVF0023476 vs. ExPASy Swiss-Prot
Match: P71020 (Putative RNA-binding protein YlmH OS=Bacillus subtilis (strain 168) OX=224308 GN=ylmH PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.2e-19
Identity = 69/225 (30.67%), Postives = 112/225 (49.78%), Query Frame = 0


Query: 97  TNFLTPPVVKESML--AIQKLADVKAIAQGGYPEAERCRISVGHSDELTSDPDI-ISALS 156
           T+FL P   +E ++  A+   ADV     GGY  AER R  +        + D  + A +
Sbjct: 35  TDFLDP---REQVILSAVTGQADVGLAFSGGYDRAERKRAILFPEYITPEESDFELQAFN 94

Query: 157 ITGNFTFHPCSHGDFLGSILGTGIAREKLGDIIIQEETGAQVVIVPELVDFLISSLRKVG 216
           +     F    H   LG+++G G+ R+K GDI+   ET  Q+++  +  DF+ + L + G
Sbjct: 95  VRYADKFVSVDHRSLLGALMGIGLKRQKFGDIVF-SETAVQLIVSADTADFVAAQLTQAG 154

Query: 217 NVTVSCTRIPLTALEYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVN 276
              VS  +I L+ L       +      +SLR+DA+ ++  + SR K   L+ +G V+VN
Sbjct: 155 KAAVSLEKIDLSDLNIPAVDVEIRDDTVSSLRLDAVCASMSRQSRQKSQTLVKNGLVKVN 214

Query: 277 WTPITKNGTILKTGDIVSVSGKGRLKIGEI-NSTKKGKFAVELIR 318
           W  +     I+  GD++S+ G GR  + +I   TKK K+ V   R
Sbjct: 215 WKVVEDPSYIVAEGDMLSIRGFGRCSLTKIEGKTKKDKWRVTFER 255

[Close]

BLAST of IVF0023476 vs. ExPASy TrEMBL
Match: A0A1S3C3I2 (putative RNA-binding protein YlmH isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496076 PE=4 SV=1)

HSP 1 Score: 615.9 bits (1587), Expect = 9.3e-173
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0


Query: 1   MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFPSSPLGTSGICQLVQAVKG 60
           MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFPSSPLGTSGICQLVQAVKG
Sbjct: 1   MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFPSSPLGTSGICQLVQAVKG 60

Query: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120
           DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA
Sbjct: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120

Query: 121 IAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180
           IAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE
Sbjct: 121 IAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180

Query: 181 KLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240
           KLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI
Sbjct: 181 KLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240

Query: 241 EASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI 300
           EASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI
Sbjct: 241 EASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI 300

Query: 301 GEINSTKKGKFAVELIRYV 320
           GEINSTKKGKFAVELIRYV
Sbjct: 301 GEINSTKKGKFAVELIRYV 319

[Close]

BLAST of IVF0023476 vs. ExPASy TrEMBL
Match: A0A0A0LC56 (S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G233470 PE=4 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 4.6e-164
Identity = 304/319 (95.30%), Postives = 312/319 (97.81%), Query Frame = 0


Query: 1   MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFPSSPLGTSGICQLVQAVKG 60
           MAAT T+I ALWSLR A+QFSSFRRPL +NLNRL F+E RFPSSPLGTSGICQLVQAVKG
Sbjct: 1   MAATATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFPSSPLGTSGICQLVQAVKG 60

Query: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120
           DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA
Sbjct: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120

Query: 121 IAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180
           IAQGGYPEAERCRISVGH+DELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE
Sbjct: 121 IAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180

Query: 181 KLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240
           KLGDI++QEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI
Sbjct: 181 KLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240

Query: 241 EASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI 300
           EASLRVDA+ASAGFKISRSKLVDLISSGDVRVNWT ITKNGTILKTGDIVSVSGKGRLKI
Sbjct: 241 EASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTSITKNGTILKTGDIVSVSGKGRLKI 300

Query: 301 GEINSTKKGKFAVELIRYV 320
           GEINSTKKGKFAVELIRYV
Sbjct: 301 GEINSTKKGKFAVELIRYV 319

[Close]

BLAST of IVF0023476 vs. ExPASy TrEMBL
Match: A0A6J1J103 (uncharacterized protein LOC111480897 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480897 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 8.2e-153
Identity = 285/322 (88.51%), Postives = 301/322 (93.48%), Query Frame = 0


Query: 1   MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRF---PSSPLGTSGICQLVQA 60
           MAA T +IGALWSLR A+Q SS R PL VNL+++ FHE RF   PSSPLG+SG+CQLVQA
Sbjct: 1   MAAATASIGALWSLRRAAQSSSLRTPLAVNLSKVSFHEARFPTSPSSPLGSSGMCQLVQA 60

Query: 61  VKGDIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLAD 120
           VKGDIDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAI+KLAD
Sbjct: 61  VKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIKKLAD 120

Query: 121 VKAIAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGI 180
           VKAIAQGGYPEAERCRISVGH+DELTSDPD++SALSITGNF FH C+HGDFLG+ILGTGI
Sbjct: 121 VKAIAQGGYPEAERCRISVGHADELTSDPDVVSALSITGNFMFHTCTHGDFLGAILGTGI 180

Query: 181 AREKLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTF 240
           AREKLGDII+QEE GAQVVIVPELVDFL+SSL KVGNVTVSCTRIPLT L+YEPPKTKTF
Sbjct: 181 AREKLGDIILQEEKGAQVVIVPELVDFLVSSLHKVGNVTVSCTRIPLTDLDYEPPKTKTF 240

Query: 241 KTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR 300
           KTIEASLRVDALASAGFKISRSKLVD ISSGDVRVNWT ITKNGTILKTGDIVSVSGKGR
Sbjct: 241 KTIEASLRVDALASAGFKISRSKLVDFISSGDVRVNWTTITKNGTILKTGDIVSVSGKGR 300

Query: 301 LKIGEINSTKKGKFAVELIRYV 320
           LKIGEIN TKKGKFAVELIRYV
Sbjct: 301 LKIGEINPTKKGKFAVELIRYV 322

[Close]

BLAST of IVF0023476 vs. ExPASy TrEMBL
Match: A0A6J1CP18 (uncharacterized protein LOC111012786 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012786 PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.4e-152
Identity = 286/317 (90.22%), Postives = 300/317 (94.64%), Query Frame = 0


Query: 6   TTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRF---PSSPLGTSGICQLVQAVKGDI 65
           T+IGALWSLR A+Q SSFR PL +NL+   FH+ RF   PSSP G+SGICQLVQAVKGDI
Sbjct: 4   TSIGALWSLRRAAQASSFRIPLALNLS---FHQARFPPSPSSPPGSSGICQLVQAVKGDI 63

Query: 66  DVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 125
           DVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA
Sbjct: 64  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 123

Query: 126 QGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 185
           QGGYPEAERCRISVGH+DELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL
Sbjct: 124 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 183

Query: 186 GDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIEA 245
           GDII+Q E GAQVV+VPELVDFLISSLRKVGNVTVSCTRIPLTAL+YEPPKTKTF TIEA
Sbjct: 184 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 243

Query: 246 SLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIGE 305
           SLRVDA+ASAGFKISRSKLVDLISSGDVRVNWTP+TKNGT LKTGD+VSVSGKGRLKIGE
Sbjct: 244 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 303

Query: 306 INSTKKGKFAVELIRYV 320
           INSTKKGKF+VELIRYV
Sbjct: 304 INSTKKGKFSVELIRYV 317

[Close]

BLAST of IVF0023476 vs. ExPASy TrEMBL
Match: A0A6J1FU11 (uncharacterized protein LOC111446880 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446880 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 4.1e-152
Identity = 283/322 (87.89%), Postives = 299/322 (92.86%), Query Frame = 0


Query: 1   MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRF---PSSPLGTSGICQLVQA 60
           MAA T +IGALWSLR A++ SSFR PL VNL ++ FHE RF   PSSPLG SG+CQLVQA
Sbjct: 1   MAAATASIGALWSLRRAARSSSFRTPLAVNLGKVSFHEARFPSSPSSPLGASGMCQLVQA 60

Query: 61  VKGDIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLAD 120
           VKGDIDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLAD
Sbjct: 61  VKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLAD 120

Query: 121 VKAIAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGI 180
           VKAIAQGGYPEAERCRISVGH+DELTSDPD++SALSITGNF F  C+HGDFLG+ILGTGI
Sbjct: 121 VKAIAQGGYPEAERCRISVGHADELTSDPDVVSALSITGNFVFQTCTHGDFLGAILGTGI 180

Query: 181 AREKLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTF 240
           AREKLGDII+QEE GAQVVIVPELVDFL+SSLRKVGNVTVSCTRIPLT L+YEPPKTKTF
Sbjct: 181 AREKLGDIILQEEKGAQVVIVPELVDFLVSSLRKVGNVTVSCTRIPLTDLDYEPPKTKTF 240

Query: 241 KTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR 300
           KTIEASLRVDALASAGFKISRSKLVD IS GDVRVNWT ITKNGTILKTGDIVSVSGKGR
Sbjct: 241 KTIEASLRVDALASAGFKISRSKLVDFISGGDVRVNWTTITKNGTILKTGDIVSVSGKGR 300

Query: 301 LKIGEINSTKKGKFAVELIRYV 320
           LKIGEIN TKKGKFA+ELI+YV
Sbjct: 301 LKIGEINPTKKGKFAIELIKYV 322

[Close]

BLAST of IVF0023476 vs. NCBI nr
Match: XP_008456024.1 (PREDICTED: putative RNA-binding protein YlmH isoform X2 [Cucumis melo])

HSP 1 Score: 612 bits (1579), Expect = 1.25e-220
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0


Query: 1   MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFPSSPLGTSGICQLVQAVKG 60
           MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFPSSPLGTSGICQLVQAVKG
Sbjct: 1   MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFPSSPLGTSGICQLVQAVKG 60

Query: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120
           DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA
Sbjct: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120

Query: 121 IAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180
           IAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE
Sbjct: 121 IAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180

Query: 181 KLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240
           KLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI
Sbjct: 181 KLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240

Query: 241 EASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI 300
           EASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI
Sbjct: 241 EASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI 300

Query: 301 GEINSTKKGKFAVELIRYV 319
           GEINSTKKGKFAVELIRYV
Sbjct: 301 GEINSTKKGKFAVELIRYV 319

[Close]

BLAST of IVF0023476 vs. NCBI nr
Match: XP_004146247.1 (uncharacterized protein LOC101221944 [Cucumis sativus] >XP_031738291.1 uncharacterized protein LOC101221944 [Cucumis sativus] >KGN57626.1 hypothetical protein Csa_011390 [Cucumis sativus])

HSP 1 Score: 583 bits (1504), Expect = 3.38e-209
Identity = 304/319 (95.30%), Postives = 312/319 (97.81%), Query Frame = 0


Query: 1   MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFPSSPLGTSGICQLVQAVKG 60
           MAAT T+I ALWSLR A+QFSSFRRPL +NLNRL F+E RFPSSPLGTSGICQLVQAVKG
Sbjct: 1   MAATATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFPSSPLGTSGICQLVQAVKG 60

Query: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120
           DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA
Sbjct: 61  DIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 120

Query: 121 IAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180
           IAQGGYPEAERCRISVGH+DELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE
Sbjct: 121 IAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 180

Query: 181 KLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240
           KLGDI++QEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI
Sbjct: 181 KLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTI 240

Query: 241 EASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKI 300
           EASLRVDA+ASAGFKISRSKLVDLISSGDVRVNWT ITKNGTILKTGDIVSVSGKGRLKI
Sbjct: 241 EASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTSITKNGTILKTGDIVSVSGKGRLKI 300

Query: 301 GEINSTKKGKFAVELIRYV 319
           GEINSTKKGKFAVELIRYV
Sbjct: 301 GEINSTKKGKFAVELIRYV 319

[Close]

BLAST of IVF0023476 vs. NCBI nr
Match: XP_038899605.1 (putative RNA-binding protein YlmH [Benincasa hispida])

HSP 1 Score: 555 bits (1429), Expect = 9.40e-198
Identity = 289/317 (91.17%), Postives = 301/317 (94.95%), Query Frame = 0


Query: 6   TTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFPSSP---LGTSGICQLVQAVKGDI 65
           T+IGA WSLR A+Q SSFR PL VNLN+L FHE RFPSSP   LG+SGICQLVQAVKGDI
Sbjct: 4   TSIGARWSLRRAAQSSSFRSPLAVNLNKLSFHEARFPSSPSSPLGSSGICQLVQAVKGDI 63

Query: 66  DVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 125
           DVLLNGVGDKGVIVDVK ILVMAKRSLSRR VLHTNFLTPPVVKES+LA+QKLADVKAIA
Sbjct: 64  DVLLNGVGDKGVIVDVKHILVMAKRSLSRRVVLHTNFLTPPVVKESILALQKLADVKAIA 123

Query: 126 QGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 185
           QGGYPEAERCRISVGH+DEL SDPDI+SALSITGNF FHPCSHGDFLG+ILGTGIAREKL
Sbjct: 124 QGGYPEAERCRISVGHADELLSDPDIVSALSITGNFMFHPCSHGDFLGAILGTGIAREKL 183

Query: 186 GDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIEA 245
           GDII+QEE GAQVV+VPELVDFL SSLRKVGNVTVSCTRIPLTAL+YEPPKTKTFKTIEA
Sbjct: 184 GDIILQEEKGAQVVVVPELVDFLASSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEA 243

Query: 246 SLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIGE 305
           SLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIGE
Sbjct: 244 SLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIGE 303

Query: 306 INSTKKGKFAVELIRYV 319
           INSTKKGKFAVELIRYV
Sbjct: 304 INSTKKGKFAVELIRYV 320

[Close]

BLAST of IVF0023476 vs. NCBI nr
Match: KAG6600381.1 (hypothetical protein SDJN03_05614, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031043.1 ylmH [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 548 bits (1412), Expect = 3.94e-195
Identity = 284/322 (88.20%), Postives = 300/322 (93.17%), Query Frame = 0


Query: 1   MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFPSSP---LGTSGICQLVQA 60
           MAA T +IGALWSLR A+Q SSFR PL +NL ++ FHE RFPSSP   LG SG+CQLVQA
Sbjct: 1   MAAATASIGALWSLRRAAQSSSFRTPLAINLGKVSFHEARFPSSPSSPLGASGMCQLVQA 60

Query: 61  VKGDIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLAD 120
           VKGDIDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLAD
Sbjct: 61  VKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLAD 120

Query: 121 VKAIAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGI 180
           VKAIAQGGYPEAERCRISVGH+DELTSDPD++SALSITGNF FH C+HGDFLG+ILGTGI
Sbjct: 121 VKAIAQGGYPEAERCRISVGHADELTSDPDVVSALSITGNFVFHTCTHGDFLGAILGTGI 180

Query: 181 AREKLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTF 240
           AREKLGDII+QEE GAQVVIVPELVDFL+SSLRKVGNVTVSCTRIPLT L+YEPPKTKTF
Sbjct: 181 AREKLGDIILQEEKGAQVVIVPELVDFLVSSLRKVGNVTVSCTRIPLTDLDYEPPKTKTF 240

Query: 241 KTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR 300
           KTIEASLRVDALASAGFKISRSKLVD IS GDVRVNWT ITKNGTILKTGDIVSVSGKGR
Sbjct: 241 KTIEASLRVDALASAGFKISRSKLVDFISGGDVRVNWTTITKNGTILKTGDIVSVSGKGR 300

Query: 301 LKIGEINSTKKGKFAVELIRYV 319
           LKIGEIN TKKGKFA+ELI+YV
Sbjct: 301 LKIGEINPTKKGKFAIELIKYV 322

[Close]

BLAST of IVF0023476 vs. NCBI nr
Match: XP_023554595.1 (uncharacterized protein LOC111811761 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 546 bits (1408), Expect = 1.60e-194
Identity = 285/322 (88.51%), Postives = 300/322 (93.17%), Query Frame = 0


Query: 1   MAATTTTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFPSSP---LGTSGICQLVQA 60
           MAA T +IGALWSLR A+  SSFR PL VNL+++ FHE RFPSSP   LG SG+CQLVQA
Sbjct: 1   MAAATASIGALWSLRRATLSSSFRTPLAVNLSKVSFHEARFPSSPSSPLGASGMCQLVQA 60

Query: 61  VKGDIDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLAD 120
           VKGDIDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLAD
Sbjct: 61  VKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLAD 120

Query: 121 VKAIAQGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGI 180
           VKAIAQGGYPEAERCRISVGH+DELTSDPDI+SALSITGNF FH C+HGDFLG+ILGTGI
Sbjct: 121 VKAIAQGGYPEAERCRISVGHADELTSDPDIVSALSITGNFVFHTCTHGDFLGAILGTGI 180

Query: 181 AREKLGDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTF 240
           AREKLGDII+QEE GAQVVIVPELVDFL+SSLRKVGNVTVSCTRIPLT L+YEPPKTKTF
Sbjct: 181 AREKLGDIILQEEKGAQVVIVPELVDFLVSSLRKVGNVTVSCTRIPLTDLDYEPPKTKTF 240

Query: 241 KTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR 300
           KTIEASLRVDALASAGFKISRSKLVD IS GDVRVNWT ITKNGTILKTGDIVSVSGKGR
Sbjct: 241 KTIEASLRVDALASAGFKISRSKLVDFISGGDVRVNWTTITKNGTILKTGDIVSVSGKGR 300

Query: 301 LKIGEINSTKKGKFAVELIRYV 319
           LKIGEIN TKKGKFA+ELI+YV
Sbjct: 301 LKIGEINPTKKGKFAIELIKYV 322

[Close]

BLAST of IVF0023476 vs. TAIR 10
Match: AT1G53120.1 (RNA-binding S4 domain-containing protein )

HSP 1 Score: 419.5 bits (1077), Expect = 2.5e-117
Identity = 215/317 (67.82%), Postives = 261/317 (82.33%), Query Frame = 0


Query: 6   TTIGALW-SLRIASQFSSFRRPLPVNLNRLYFHETRFPSSPLGTSGI--CQLVQAVKGDI 65
           T++   W  LR+A +  +    L  N   L  + +   S PL  S +  C   +A+KGD+
Sbjct: 4   TSLAPPWVILRLAFRSVAASSCLHTNQKTLITNLSIPTSFPLRQSALRRCYSAEAIKGDV 63

Query: 66  DVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 125
           D LL GVGD+ V  +VKQIL MA+R+ S+REVLHT+FLTPP+VKES+  ++K ADVK +A
Sbjct: 64  DFLLKGVGDQAVAKEVKQILEMARRASSKREVLHTDFLTPPIVKESVSLLEKFADVKIVA 123

Query: 126 QGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 185
           QGGYPEAERCRIS+GH D LTSDPDI++ALSITGNF F PCSHGDFLG+ILGTGI+REKL
Sbjct: 124 QGGYPEAERCRISIGHPDVLTSDPDIVAALSITGNFGFQPCSHGDFLGAILGTGISREKL 183

Query: 186 GDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIEA 245
           GDI+IQEE GAQV+IVPELVDF++++L KVGNV V+C++IPL ALEYEPP+T +FKT+EA
Sbjct: 184 GDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRTNSFKTVEA 243

Query: 246 SLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIGE 305
           SLR+DA+ASAGFKISRSKLVDLISS DVRVNW  +TKNGTI+KTGD+VSVSGKGRLKIGE
Sbjct: 244 SLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKGRLKIGE 303

Query: 306 INSTKKGKFAVELIRYV 320
           IN TKKGKFAVE+IRY+
Sbjct: 304 INETKKGKFAVEIIRYL 320

The following BLAST results are available for this feature:

BLAST of IVF0023476 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P71020	5.2e-19	30.67	Putative RNA-binding protein YlmH OS=Bacillus subtilis (strain 168) OX=224308 GN...	[more]

BLAST of IVF0023476 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C3I2	9.3e-173	100.00	putative RNA-binding protein YlmH isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A0A0LC56	4.6e-164	95.30	S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G233...	[more]
A0A6J1J103	8.2e-153	88.51	uncharacterized protein LOC111480897 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1CP18	1.4e-152	90.22	uncharacterized protein LOC111012786 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1FU11	4.1e-152	87.89	uncharacterized protein LOC111446880 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of IVF0023476 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456024.1	1.25e-220	100.00	PREDICTED: putative RNA-binding protein YlmH isoform X2 [Cucumis melo]	[more]
XP_004146247.1	3.38e-209	95.30	uncharacterized protein LOC101221944 [Cucumis sativus] >XP_031738291.1 uncharact...	[more]
XP_038899605.1	9.40e-198	91.17	putative RNA-binding protein YlmH [Benincasa hispida]	[more]
KAG6600381.1	3.94e-195	88.20	hypothetical protein SDJN03_05614, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023554595.1	1.60e-194	88.51	uncharacterized protein LOC111811761 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0023476 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53120.1	2.5e-117	67.82	RNA-binding S4 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 244..304 e-value: 4.6E-11 score: 52.8
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 248..290 e-value: 4.4E-8 score: 32.7
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 245..299 e-value: 9.71607E-11 score: 54.9482
None	No IPR available	GENE3D	3.30.1370.160		coord: 75..137 e-value: 4.5E-5 score: 25.3
None	No IPR available	PANTHER	PTHR32219:SF3	RNA-BINDING PROTEIN YLMH-RELATED	coord: 50..319
None	No IPR available	PANTHER	PTHR32219	RNA-BINDING PROTEIN YLMH-RELATED	coord: 50..319
None	No IPR available	PROSITE	PS50889	S4	coord: 244..304 score: 13.680749
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 125..307
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 145..227 e-value: 2.2E-22 score: 80.6
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 236..295 e-value: 1.1E-7 score: 33.2
IPR040591	YlmH, putative RNA-binding domain	PFAM	PF17774	YlmH_RBD	coord: 150..225 e-value: 6.2E-14 score: 52.1
IPR017506	Photosystem II S4	TIGRFAM	TIGR03069	TIGR03069	coord: 77..317 e-value: 6.0E-95 score: 315.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023476.1	IVF0023476.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding