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IVF0023456 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAGACCTCGTACTTGGGATTTCCTCTTGGAAGATCAATCCCCATGCCATTGGCTCAGTCTCTGGTAGTAAGGAGGAGTAATCCGAGAGTGGTTCAAGCTAAGATCAAGCAATGGGGTGAGAATGAGAAAAGCCCTGCAAGGCTCAGCCCACTGGCTATCCCCTTCTTGGATGAGCAAATTGAAGCTGGGTCTGTCCCAGTAGAGATCCAGGAAGTTCTGAATGAGTACGTTGATATAATGCCGCGAAGACCTTGCCCACGTGGGATTGATCATGAGATTGAACTTGTCCCAGGAGCCAAACCCCCAGCTCAAAATGCCTACCGAATGGCTTAG ATGGATGAGACCTCGTACTTGGGATTTCCTCTTGGAAGATCAATCCCCATGCCATTGGCTCAGTCTCTGGTAGTAAGGAGGAGTAATCCGAGAGTGGTTCAAGCTAAGATCAAGCAATGGGGTGAGAATGAGAAAAGCCCTGCAAGGCTCAGCCCACTGGCTATCCCCTTCTTGGATGAGCAAATTGAAGCTGGGTCTGTCCCAGTAGAGATCCAGGAAGTTCTGAATGAGTACGTTGATATAATGCCGCGAAGACCTTGCCCACGTGGGATTGATCATGAGATTGAACTTGTCCCAGGAGCCAAACCCCCAGCTCAAAATGCCTACCGAATGGCTTAG ATGGATGAGACCTCGTACTTGGGATTTCCTCTTGGAAGATCAATCCCCATGCCATTGGCTCAGTCTCTGGTAGTAAGGAGGAGTAATCCGAGAGTGGTTCAAGCTAAGATCAAGCAATGGGGTGAGAATGAGAAAAGCCCTGCAAGGCTCAGCCCACTGGCTATCCCCTTCTTGGATGAGCAAATTGAAGCTGGGTCTGTCCCAGTAGAGATCCAGGAAGTTCTGAATGAGTACGTTGATATAATGCCGCGAAGACCTTGCCCACGTGGGATTGATCATGAGATTGAACTTGTCCCAGGAGCCAAACCCCCAGCTCAAAATGCCTACCGAATGGCTTAG MDETSYLGFPLGRSIPMPLAQSLVVRRSNPRVVQAKIKQWGENEKSPARLSPLAIPFLDEQIEAGSVPVEIQEVLNEYVDIMPRRPCPRGIDHEIELVPGAKPPAQNAYRMA Homology
BLAST of IVF0023456 vs. ExPASy TrEMBL
Match: A0A5A7T1J5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46581G00050 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 8.6e-57 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of IVF0023456 vs. ExPASy TrEMBL
Match: A0A5A7VNF6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001440 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 4.3e-48 Identity = 99/112 (88.39%), Postives = 105/112 (93.75%), Query Frame = 0
BLAST of IVF0023456 vs. ExPASy TrEMBL
Match: A0A5D3BD02 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold81732G00010 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of IVF0023456 vs. ExPASy TrEMBL
Match: A0A5A7VIA0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002590 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.4e-46 Identity = 97/112 (86.61%), Postives = 100/112 (89.29%), Query Frame = 0
BLAST of IVF0023456 vs. ExPASy TrEMBL
Match: A0A5A7VDT8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001250 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 3.8e-20 Identity = 65/113 (57.52%), Postives = 74/113 (65.49%), Query Frame = 0
BLAST of IVF0023456 vs. NCBI nr
Match: KAA0036096.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 229 bits (583), Expect = 1.25e-75 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of IVF0023456 vs. NCBI nr
Match: KAA0066799.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK27946.1 reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 200 bits (508), Expect = 3.46e-64 Identity = 99/112 (88.39%), Postives = 105/112 (93.75%), Query Frame = 0
BLAST of IVF0023456 vs. NCBI nr
Match: TYJ96846.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 195 bits (496), Expect = 1.41e-62 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of IVF0023456 vs. NCBI nr
Match: KAA0066867.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK28014.1 reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 194 bits (493), Expect = 1.01e-60 Identity = 97/112 (86.61%), Postives = 100/112 (89.29%), Query Frame = 0
BLAST of IVF0023456 vs. NCBI nr
Match: KAA0065444.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 107 bits (267), Expect = 1.15e-26 Identity = 65/113 (57.52%), Postives = 74/113 (65.49%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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