IVF0023452 (gene) Melon (IVF77) v1

Overview


Name	IVF0023452
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	tig00000267: 717700 .. 719653 (+)
RNA-Seq Expression	IVF0023452
Synteny	IVF0023452

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATATCTCCACCAGTAATATTCTCTATCAACTTCATCTTCCTCTGGTTAATGGAACTTCAAATACTTCGTCTTCTCGTTACTGGAAGGATTCAATAGTCTTGAACTCTCGCCGAAGATGCTCTCAAATGGCTACTGTTACCGCCATTGTTGATGAACTTCACAAATTAGAGAGTGAAAGAGAGAAACCGAGGTTTCGGTGGGTCGAGGTTGGATATAATATTACCGAAACGCAGAAGCAGGCTATATCTCAGCTTCCTCCTAAGATGACTAAAAAATGTAAGGCTGTGATGAAGCAAATTATATGTTTTTCACCTCAGAAGGGTGAGTTATCAGACATGTTGGCGGCTTGGGTGAGGATTATGAAGCCTGAAAGAGCCGACTGGCTTTCAGTTCTTAAGCATTTGAGGATTTTGAATCATCCTCTCTATATCCAGGTACGTTAAATCTCCTATAATTTCAAGAACAAGCTTAGTCCATCAACATTAAGTTTGTTTGTCTATAAATTTTAGAAATTAATTCGTCTACTGAAATCAATTCGAATTCTATGTTCATGAACCACTAAACTTTCGATTTTGTGTCTGTTAGATTCATGGATTCTAAAAACGTTAAAGCTCTGGATTAAATTTGTAATTTCGATTATTAGAGGAGATCAAATAATCACAAAGCTGATTAATTTTGTAAACTAGTCTACATCAACTTTTTTTTTTCTTTTAAGATTACGTTAGATAGGGACCTCCTCCTCTGCCAGCCTGGTTAGCATATCTATTTAATTTCTCATCGTAAGTTCGACAGAATGGCGCTTATGTCAAGGATGTTTAGAATGATTTCAAGACATTGGTGGAAATGGATTAGTTGAGATATACGTAAATTGGCTCAAAACACTCGTGGATAAAAGAAAAGACATGGGTTCAACAAAATAGTTGCATTGACTCAGATTGGATACTGCATTTGAAAATTATATATGATTTTTCAATTATTGTAGGTAAATTCTAAAAGTTGGTTTTTGTTTTTTAATTTTGCTAAGAGTTCAAATGCCTCCTTAAGAAATGTAATAACCATAGTAAAGAATTTGTAAGAAATACGATCATACTTCTCACAAGTTAAATGGATATCAAATGGGACCTAAGCAATTGCTGATATTTCATGGCTAAGTTAATGTGCCATTGCTCTTAGGTGGCAGAAGCTGCTCTTGTAGAGATAACATTTGAAGCCAATACTCGAGACTACACAAAGATTATTCATCATTATGGGAAGCAAAACCAACTCGAGGATGCTGAAAAAGTTCTCTTAACCATGAGAGAAAGGGGTTTTGCTTGTGATCAGATAACATTAACCACAATGATCCACATATATAGCAAGGCTGACAAACTTAAACTAGCCAAACAAACTTTCGAAGAGCTCAAACTACTCGAGCAATCGTTGGATAAAAGATCATATGGTGCAATGATTATGGCATATGTCAGGGCTGGGTTGCCCGAGGAAGGAGAAAAAATTCTGAAAGAAATGGATGCAAAAGATATTTATGCAGGAAGCGAAGTTTACAAGGCTTTGTTAAGAGCATACTCCATGGCAGGCGATGCTGAAGGAGCCCAAAGAGTATTCGATGCAATTCAATTGGCTGCTATTCCTCCTGATGAAAAGCTATGCGGTCTTTTGATGAATGCCTATCTGATGGCCGGTCAAAGCCGAAAGGCACAAATTGCTTTTGACAACATGAGGAGGGCAGGCATTGAACCTAGTGACAAATGCATAGCTTTGGCATTAAGTGCATATGAAAAGGAAAACAGGTTAAATGCAGCGTTGGAACTTCTAATAGATTTGGAGAAGGATAACGTTATGGTTGGGAAGGAAGCTTCACAAATATTAGCAGCTTGGCTTAAACGATTAGGGGTGGTGGAAGAGATTGAAATTGTGTTGAGAGAATACACTGCAAAAGAAGTGAGCCGCTAA

mRNA sequence

ATGCATATCTCCACCAGTAATATTCTCTATCAACTTCATCTTCCTCTGGTTAATGGAACTTCAAATACTTCGTCTTCTCGTTACTGGAAGGATTCAATAGTCTTGAACTCTCGCCGAAGATGCTCTCAAATGGCTACTGTTACCGCCATTGTTGATGAACTTCACAAATTAGAGAGTGAAAGAGAGAAACCGAGGTTTCGGTGGGTCGAGGTTGGATATAATATTACCGAAACGCAGAAGCAGGCTATATCTCAGCTTCCTCCTAAGATGACTAAAAAATGTAAGGCTGTGATGAAGCAAATTATATGTTTTTCACCTCAGAAGGGTGAGTTATCAGACATGTTGGCGGCTTGGGTGAGGATTATGAAGCCTGAAAGAGCCGACTGGCTTTCAGTTCTTAAGCATTTGAGGATTTTGAATCATCCTCTCTATATCCAGGTGGCAGAAGCTGCTCTTGTAGAGATAACATTTGAAGCCAATACTCGAGACTACACAAAGATTATTCATCATTATGGGAAGCAAAACCAACTCGAGGATGCTGAAAAAGTTCTCTTAACCATGAGAGAAAGGGGTTTTGCTTGTGATCAGATAACATTAACCACAATGATCCACATATATAGCAAGGCTGACAAACTTAAACTAGCCAAACAAACTTTCGAAGAGCTCAAACTACTCGAGCAATCGTTGGATAAAAGATCATATGGTGCAATGATTATGGCATATGTCAGGGCTGGGTTGCCCGAGGAAGGAGAAAAAATTCTGAAAGAAATGGATGCAAAAGATATTTATGCAGGAAGCGAAGTTTACAAGGCTTTGTTAAGAGCATACTCCATGGCAGGCGATGCTGAAGGAGCCCAAAGAGTATTCGATGCAATTCAATTGGCTGCTATTCCTCCTGATGAAAAGCTATGCGGTCTTTTGATGAATGCCTATCTGATGGCCGGTCAAAGCCGAAAGGCACAAATTGCTTTTGACAACATGAGGAGGGCAGGCATTGAACCTAGTGACAAATGCATAGCTTTGGCATTAAGTGCATATGAAAAGGAAAACAGGTTAAATGCAGCGTTGGAACTTCTAATAGATTTGGAGAAGGATAACGTTATGGTTGGGAAGGAAGCTTCACAAATATTAGCAGCTTGGCTTAAACGATTAGGGGTGGTGGAAGAGATTGAAATTGTGTTGAGAGAATACACTGCAAAAGAAGTGAGCCGCTAA

Coding sequence (CDS)

ATGCATATCTCCACCAGTAATATTCTCTATCAACTTCATCTTCCTCTGGTTAATGGAACTTCAAATACTTCGTCTTCTCGTTACTGGAAGGATTCAATAGTCTTGAACTCTCGCCGAAGATGCTCTCAAATGGCTACTGTTACCGCCATTGTTGATGAACTTCACAAATTAGAGAGTGAAAGAGAGAAACCGAGGTTTCGGTGGGTCGAGGTTGGATATAATATTACCGAAACGCAGAAGCAGGCTATATCTCAGCTTCCTCCTAAGATGACTAAAAAATGTAAGGCTGTGATGAAGCAAATTATATGTTTTTCACCTCAGAAGGGTGAGTTATCAGACATGTTGGCGGCTTGGGTGAGGATTATGAAGCCTGAAAGAGCCGACTGGCTTTCAGTTCTTAAGCATTTGAGGATTTTGAATCATCCTCTCTATATCCAGGTGGCAGAAGCTGCTCTTGTAGAGATAACATTTGAAGCCAATACTCGAGACTACACAAAGATTATTCATCATTATGGGAAGCAAAACCAACTCGAGGATGCTGAAAAAGTTCTCTTAACCATGAGAGAAAGGGGTTTTGCTTGTGATCAGATAACATTAACCACAATGATCCACATATATAGCAAGGCTGACAAACTTAAACTAGCCAAACAAACTTTCGAAGAGCTCAAACTACTCGAGCAATCGTTGGATAAAAGATCATATGGTGCAATGATTATGGCATATGTCAGGGCTGGGTTGCCCGAGGAAGGAGAAAAAATTCTGAAAGAAATGGATGCAAAAGATATTTATGCAGGAAGCGAAGTTTACAAGGCTTTGTTAAGAGCATACTCCATGGCAGGCGATGCTGAAGGAGCCCAAAGAGTATTCGATGCAATTCAATTGGCTGCTATTCCTCCTGATGAAAAGCTATGCGGTCTTTTGATGAATGCCTATCTGATGGCCGGTCAAAGCCGAAAGGCACAAATTGCTTTTGACAACATGAGGAGGGCAGGCATTGAACCTAGTGACAAATGCATAGCTTTGGCATTAAGTGCATATGAAAAGGAAAACAGGTTAAATGCAGCGTTGGAACTTCTAATAGATTTGGAGAAGGATAACGTTATGGTTGGGAAGGAAGCTTCACAAATATTAGCAGCTTGGCTTAAACGATTAGGGGTGGTGGAAGAGATTGAAATTGTGTTGAGAGAATACACTGCAAAAGAAGTGAGCCGCTAA

Protein sequence

MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVSR

Homology

[Close]

BLAST of IVF0023452 vs. ExPASy Swiss-Prot
Match: Q9LPC4 (Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX=3702 GN=At1g01970 PE=2 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 3.0e-125
Identity = 219/394 (55.58%), Postives = 304/394 (77.16%), Query Frame = 0


Query: 10  YQLHLPLVNGTSNTSSSRYWKDSIVLNS--RRRCSQMATVTAIVDELHKLESEREKPRFR 69
           + L  PLV          + ++ +++ S   R CS     +  + E+ + E   +   F 
Sbjct: 12  FGLKCPLVIARHRLYHRMFRRNPLLVESHLNRLCSCKCNASLAIGEVVEKEDAEQSRSFN 71

Query: 70  WVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVRIMKPERA 129
           W +VG N+TE Q +AI+++P KM+K+C+A+M+QIICFSP+KG   D+L AW+R M P RA
Sbjct: 72  WADVGLNLTEEQDEAITRIPIKMSKRCQALMRQIICFSPEKGSFCDLLGAWLRRMNPIRA 131

Query: 130 DWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDAEKVLLTM 189
           DWLS+LK L+ L+ P YI+VAE +L++ +FEAN RDYTKIIH+YGK NQ+EDAE+ LL+M
Sbjct: 132 DWLSILKELKNLDSPFYIKVAEFSLLQDSFEANARDYTKIIHYYGKLNQVEDAERTLLSM 191

Query: 190 RERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMAYVRAGLP 249
           + RGF  DQ+TLT M+ +YSKA   KLA++TF E+KLL + LD RSYG+MIMAY+RAG+P
Sbjct: 192 KNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEIKLLGEPLDYRSYGSMIMAYIRAGVP 251

Query: 250 EEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPDEKLCGLL 309
           E+GE +L+EMD+++I AG EVYKALLR YSM GDAEGA+RVFDA+Q+A I PD KLCGLL
Sbjct: 252 EKGESLLREMDSQEICAGREVYKALLRDYSMGGDAEGAKRVFDAVQIAGITPDVKLCGLL 311

Query: 310 MNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLIDLEKDNV 369
           +NAY ++GQS+ A++AF+NMR+AGI+ +DKC+AL L+AYEKE +LN AL  L++LEKD++
Sbjct: 312 INAYSVSGQSQNARLAFENMRKAGIKATDKCVALVLAAYEKEEKLNEALGFLVELEKDSI 371

Query: 370 MVGKEASQILAAWLKRLGVVEEIEIVLREYTAKE 402
           M+GKEAS +LA W K+LGVVEE+E++LRE+++ +
Sbjct: 372 MLGKEASAVLAQWFKKLGVVEEVELLLREFSSSQ 405

[Close]

BLAST of IVF0023452 vs. ExPASy Swiss-Prot
Match: Q940Z1 (Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana OX=3702 GN=At1g19525 PE=2 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 9.7e-39
Identity = 90/209 (43.06%), Postives = 128/209 (61.24%), Query Frame = 0


Query: 187 MRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMAYVRAGL 246
           M + G   D +T T ++H+YSK+   + A + FE LK      D++ Y AMI+ YV AG 
Sbjct: 1   MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 60

Query: 247 PEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPP-DEKLCG 306
           P+ GE+++KEM AK++ A  EVY ALLRAY+  GDA GA  +  ++Q A+  P   +   
Sbjct: 61  PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYS 120

Query: 307 LLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLIDLEKD 366
           L + AY  AGQ  KA+  FD MR+ G +P DKCIA  + AY+ EN L+ AL LL+ LEKD
Sbjct: 121 LFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKD 180

Query: 367 NVMVGKEASQILAAWLKRLGVVEEIEIVL 395
            + +G     +L  W+  LG++EE E +L
Sbjct: 181 GIEIGVITYTVLVDWMANLGLIEEAEQLL 209

[Close]

BLAST of IVF0023452 vs. ExPASy Swiss-Prot
Match: O82178 (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX=3702 GN=At2g35130 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-15
Identity = 60/224 (26.79%), Postives = 107/224 (47.77%), Query Frame = 0


Query: 173 KQNQLEDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKR 232
           ++   E+A  V   M+         T   MI++Y KA K  ++ + + E++  +   +  
Sbjct: 241 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 300

Query: 233 SYGAMIMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAI 292
           +Y A++ A+ R GL E+ E+I +++    +     VY AL+ +YS AG   GA  +F  +
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360

Query: 293 QLAAIPPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRL 352
           Q     PD     ++++AY  AG    A+  F+ M+R GI P+ K   L LSAY K   +
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420

Query: 353 NAALELLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLRE 397
                ++ ++ ++ V         +     RLG   ++E +L E
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464

[Close]

BLAST of IVF0023452 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 3.7e-14
Identity = 55/245 (22.45%), Postives = 113/245 (46.12%), Query Frame = 0


Query: 152 LVEITFEANTRDYTKIIHHYGKQNQLEDAEKVLLTMRERGFACDQITLTTMIHIYSKADK 211
           ++E     N   ++ +I  + K+ +L +AEK+   M +R    D  T +++I+ +   D+
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375

Query: 212 LKLAKQTFEELKLLEQSLDKRSYGAMIMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKA 271
           L  AK  FE +   +   +  +Y  +I  + +A   EEG ++ +EM  + +   +  Y  
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435

Query: 272 LLRAYSMAGDAEGAQRVFDAIQLAAIPPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAG 331
           L++    AGD + AQ++F  +    +PPD     +L++     G+  KA + F+ ++++ 
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495

Query: 332 IEPSDKCIALALSAYEKENRLNAALELLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIE 391
           +EP      + +    K  ++    +L   L    V         + +   R G+ EE +
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555

Query: 392 IVLRE 397
            + RE
Sbjct: 556 ALFRE 560

[Close]

BLAST of IVF0023452 vs. ExPASy Swiss-Prot
Match: O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.1e-13
Identity = 61/234 (26.07%), Postives = 109/234 (46.58%), Query Frame = 0


Query: 164 YTKIIHHYGKQNQ-LEDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEEL 223
           Y  I+  +GK  +       VL  MR +G   D+ T +T++   ++   L+ AK+ F EL
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 307

Query: 224 KLLEQSLDKRSYGAMIMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDA 283
           K         +Y A++  + +AG+  E   +LKEM+     A S  Y  L+ AY  AG +
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS 367

Query: 284 EGAQRVFDAIQLAAIPPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALA 343
           + A  V + +    + P+      +++AY  AG+  +A   F +M+ AG  P+       
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427

Query: 344 LSAYEKENRLNAALELLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLRE 397
           LS   K++R N  +++L D++ +     +     + A     G+ + +  V RE
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFRE 481

[Close]

BLAST of IVF0023452 vs. ExPASy TrEMBL
Match: A0A5D3D032 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004020 PE=4 SV=1)

HSP 1 Score: 782.7 bits (2020), Expect = 7.3e-223
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0


Query: 1   MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE 60
           MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE
Sbjct: 1   MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE 60

Query: 61  REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR 120
           REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR
Sbjct: 61  REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR 120

Query: 121 IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA 180
           IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA
Sbjct: 121 IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA 180

Query: 181 EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA 240
           EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA
Sbjct: 181 EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA 240

Query: 241 YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD 300
           YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD
Sbjct: 241 YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD 300

Query: 301 EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI 360
           EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI
Sbjct: 301 EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI 360

Query: 361 DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVSR 405
           DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVSR
Sbjct: 361 DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVSR 404

[Close]

BLAST of IVF0023452 vs. ExPASy TrEMBL
Match: A0A1S3AWA7 (pentatricopeptide repeat-containing protein At1g01970 OS=Cucumis melo OX=3656 GN=LOC103483346 PE=4 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 1.6e-222
Identity = 403/404 (99.75%), Postives = 404/404 (100.00%), Query Frame = 0


Query: 1   MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE 60
           MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE
Sbjct: 1   MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE 60

Query: 61  REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR 120
           REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR
Sbjct: 61  REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR 120

Query: 121 IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA 180
           IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA
Sbjct: 121 IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA 180

Query: 181 EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA 240
           EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA
Sbjct: 181 EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA 240

Query: 241 YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD 300
           YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD
Sbjct: 241 YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD 300

Query: 301 EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI 360
           EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI
Sbjct: 301 EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI 360

Query: 361 DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVSR 405
           DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEV+R
Sbjct: 361 DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVNR 404

[Close]

BLAST of IVF0023452 vs. ExPASy TrEMBL
Match: A0A5A7U612 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G002570 PE=4 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 1.6e-222
Identity = 403/404 (99.75%), Postives = 404/404 (100.00%), Query Frame = 0


Query: 1   MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE 60
           MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE
Sbjct: 1   MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE 60

Query: 61  REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR 120
           REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR
Sbjct: 61  REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR 120

Query: 121 IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA 180
           IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA
Sbjct: 121 IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA 180

Query: 181 EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA 240
           EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA
Sbjct: 181 EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA 240

Query: 241 YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD 300
           YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD
Sbjct: 241 YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD 300

Query: 301 EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI 360
           EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI
Sbjct: 301 EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI 360

Query: 361 DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVSR 405
           DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEV+R
Sbjct: 361 DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVNR 404

[Close]

BLAST of IVF0023452 vs. ExPASy TrEMBL
Match: A0A0A0L7L8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126080 PE=4 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 1.6e-209
Identity = 378/404 (93.56%), Postives = 392/404 (97.03%), Query Frame = 0


Query: 1   MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE 60
           M ISTSNILYQLHLPLVNGTSNTS SRYW+DSIVL+SRRRCSQMAT TAIVDE+HKLESE
Sbjct: 1   MQISTSNILYQLHLPLVNGTSNTSYSRYWRDSIVLSSRRRCSQMATATAIVDEIHKLESE 60

Query: 61  REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR 120
           REKPRFRWVEVGY+ITETQKQAISQLPPKMTK+CKAVMKQIICFSPQKGELSDMLAAWVR
Sbjct: 61  REKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVR 120

Query: 121 IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA 180
           IMKPERADWL VLKHLRILNHPLYIQVAEAAL EITFEANTRDYTKIIHHYGKQNQLEDA
Sbjct: 121 IMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDA 180

Query: 181 EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA 240
           EKVLL+MRERGF CDQITLTTMIHIYSKADKL LAKQTFEELKLLEQ LDKRS+GAMIMA
Sbjct: 181 EKVLLSMRERGFVCDQITLTTMIHIYSKADKLNLAKQTFEELKLLEQPLDKRSFGAMIMA 240

Query: 241 YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD 300
           YVRAG PEEGEKILKEMDAKDIYAGSEVYKALLRAYSM G+AEGAQRVFDAIQLAAI PD
Sbjct: 241 YVRAGFPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMVGNAEGAQRVFDAIQLAAITPD 300

Query: 301 EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI 360
           EKLCGLL+NAYLMAGQSR+AQIAFDNMRRAGIEPSDKCIALALSAYEKENRLN+ALELLI
Sbjct: 301 EKLCGLLINAYLMAGQSREAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNSALELLI 360

Query: 361 DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVSR 405
           DLEKDNVMVGKEAS+ILAAWLKRLGVVEE+EIVLREYT KEV+R
Sbjct: 361 DLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVNR 404

[Close]

BLAST of IVF0023452 vs. ExPASy TrEMBL
Match: A0A6J1IR15 (pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita maxima OX=3661 GN=LOC111479721 PE=4 SV=1)

HSP 1 Score: 646.7 bits (1667), Expect = 6.3e-182
Identity = 335/410 (81.71%), Postives = 369/410 (90.00%), Query Frame = 0


Query: 1   MHISTSNILYQLH--LPLVNGTSNTSSSRYWKDSI-----VLNSRRRCSQMATVTAIVDE 60
           M  S  NILYQ+H   PLVNGT+ +S S Y +        VL+ RR C Q+ATV AIV+E
Sbjct: 1   MGTSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRTCYQLATVAAIVEE 60

Query: 61  LHKLESEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSD 120
           +HKLES REKPRFRWVEVG +ITE QKQAISQLPPKMTK+CKAVMKQIICF PQ G LSD
Sbjct: 61  VHKLESGREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFLPQNGHLSD 120

Query: 121 MLAAWVRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGK 180
           MLAAWVRIMKP+RADWLSVLKHLRIL+HPLYI+VAEAALVE TFEA+TRDYTKIIH+YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180

Query: 181 QNQLEDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRS 240
           QNQLEDAE++LL+MRERGFACDQITLTTMIHIYSKAD+L LAKQTFEELKLLE+ LD+RS
Sbjct: 181 QNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELNLAKQTFEELKLLEEPLDRRS 240

Query: 241 YGAMIMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQ 300
           Y AMIMA+VRAG+PEEGE ILKEMD KDIYAGSEVYKALLRAYSMA +AEGAQRVFDAIQ
Sbjct: 241 YDAMIMAFVRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300

Query: 301 LAAIPPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLN 360
           LAAIPPD+KLCGLL+NAYLMAGQS+KAQIAFDNMRRAG+EPSDKCIAL LSAYEKENRLN
Sbjct: 301 LAAIPPDDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360

Query: 361 AALELLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVS 404
           AALELLIDLEK+ +MVGKEAS++LAAWLKRLGVVEE+E+VLREY  KE S
Sbjct: 361 AALELLIDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 410

[Close]

BLAST of IVF0023452 vs. NCBI nr
Match: TYK17533.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 787 bits (2032), Expect = 8.46e-287
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0


Query: 1   MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE 60
           MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE
Sbjct: 1   MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE 60

Query: 61  REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR 120
           REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR
Sbjct: 61  REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR 120

Query: 121 IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA 180
           IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA
Sbjct: 121 IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA 180

Query: 181 EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA 240
           EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA
Sbjct: 181 EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA 240

Query: 241 YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD 300
           YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD
Sbjct: 241 YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD 300

Query: 301 EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI 360
           EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI
Sbjct: 301 EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI 360

Query: 361 DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVSR 404
           DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVSR
Sbjct: 361 DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVSR 404

[Close]

BLAST of IVF0023452 vs. NCBI nr
Match: XP_008438151.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Cucumis melo] >XP_008438152.1 PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Cucumis melo] >KAA0049031.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 786 bits (2029), Expect = 2.42e-286
Identity = 403/404 (99.75%), Postives = 404/404 (100.00%), Query Frame = 0


Query: 1   MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE 60
           MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE
Sbjct: 1   MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE 60

Query: 61  REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR 120
           REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR
Sbjct: 61  REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR 120

Query: 121 IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA 180
           IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA
Sbjct: 121 IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA 180

Query: 181 EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA 240
           EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA
Sbjct: 181 EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA 240

Query: 241 YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD 300
           YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD
Sbjct: 241 YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD 300

Query: 301 EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI 360
           EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI
Sbjct: 301 EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI 360

Query: 361 DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVSR 404
           DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEV+R
Sbjct: 361 DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVNR 404

[Close]

BLAST of IVF0023452 vs. NCBI nr
Match: XP_004134345.1 (pentatricopeptide repeat-containing protein At1g01970 [Cucumis sativus] >XP_011650789.1 pentatricopeptide repeat-containing protein At1g01970 [Cucumis sativus] >KGN56592.1 hypothetical protein Csa_011327 [Cucumis sativus])

HSP 1 Score: 743 bits (1917), Expect = 2.84e-269
Identity = 378/404 (93.56%), Postives = 392/404 (97.03%), Query Frame = 0


Query: 1   MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE 60
           M ISTSNILYQLHLPLVNGTSNTS SRYW+DSIVL+SRRRCSQMAT TAIVDE+HKLESE
Sbjct: 1   MQISTSNILYQLHLPLVNGTSNTSYSRYWRDSIVLSSRRRCSQMATATAIVDEIHKLESE 60

Query: 61  REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR 120
           REKPRFRWVEVGY+ITETQKQAISQLPPKMTK+CKAVMKQIICFSPQKGELSDMLAAWVR
Sbjct: 61  REKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVR 120

Query: 121 IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA 180
           IMKPERADWL VLKHLRILNHPLYIQVAEAAL EITFEANTRDYTKIIHHYGKQNQLEDA
Sbjct: 121 IMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDA 180

Query: 181 EKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMA 240
           EKVLL+MRERGF CDQITLTTMIHIYSKADKL LAKQTFEELKLLEQ LDKRS+GAMIMA
Sbjct: 181 EKVLLSMRERGFVCDQITLTTMIHIYSKADKLNLAKQTFEELKLLEQPLDKRSFGAMIMA 240

Query: 241 YVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPD 300
           YVRAG PEEGEKILKEMDAKDIYAGSEVYKALLRAYSM G+AEGAQRVFDAIQLAAI PD
Sbjct: 241 YVRAGFPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMVGNAEGAQRVFDAIQLAAITPD 300

Query: 301 EKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLI 360
           EKLCGLL+NAYLMAGQSR+AQIAFDNMRRAGIEPSDKCIALALSAYEKENRLN+ALELLI
Sbjct: 301 EKLCGLLINAYLMAGQSREAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNSALELLI 360

Query: 361 DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVSR 404
           DLEKDNVMVGKEAS+ILAAWLKRLGVVEE+EIVLREYT KEV+R
Sbjct: 361 DLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVNR 404

[Close]

BLAST of IVF0023452 vs. NCBI nr
Match: XP_038903030.1 (pentatricopeptide repeat-containing protein At1g01970 [Benincasa hispida] >XP_038903038.1 pentatricopeptide repeat-containing protein At1g01970 [Benincasa hispida])

HSP 1 Score: 689 bits (1777), Expect = 8.15e-248
Identity = 353/410 (86.10%), Postives = 382/410 (93.17%), Query Frame = 0


Query: 1   MHISTSNILYQLH--LPLVNGTSNTSSSRYWKDSI-----VLNSRRRCSQMATVTAIVDE 60
           + ISTS+I YQLH   PLVNGT  +S +RYW+ SI     VL+SRRRCS++ATV AIV+E
Sbjct: 2   IRISTSSIFYQLHPKQPLVNGTPRSSYTRYWRGSIEQTLSVLSSRRRCSRLATVAAIVEE 61

Query: 61  LHKLESEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSD 120
           +HKLE+EREKPRFRWVEVG +ITE QKQAISQLPPKMTK+CKA+MKQIICFSPQKG LSD
Sbjct: 62  VHKLENEREKPRFRWVEVGSDITEIQKQAISQLPPKMTKRCKALMKQIICFSPQKGSLSD 121

Query: 121 MLAAWVRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGK 180
           ML AWVRIMKPERADWLSVLKHLRI NHPLYI+VAEAALVEITFEANTRDYTKIIHHYGK
Sbjct: 122 MLTAWVRIMKPERADWLSVLKHLRISNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGK 181

Query: 181 QNQLEDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRS 240
           +NQLEDAEKVLL+MRERG ACDQITLTTMIHIYSKAD+L LAKQTFEELKLLE+SLD+RS
Sbjct: 182 RNQLEDAEKVLLSMRERGLACDQITLTTMIHIYSKADRLNLAKQTFEELKLLEKSLDRRS 241

Query: 241 YGAMIMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQ 300
           YGAMIMAYVRAG+PEEGE ILKEMDAK IYAGSEVYKALLRAYSMAG+AEGAQRVFDAIQ
Sbjct: 242 YGAMIMAYVRAGMPEEGENILKEMDAKQIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQ 301

Query: 301 LAAIPPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLN 360
           LA IPPDEKLCGLL+NAYLMAG+SRKAQIAFDNMRRAGIEPSDKCIAL LSAYE ENRLN
Sbjct: 302 LAVIPPDEKLCGLLINAYLMAGESRKAQIAFDNMRRAGIEPSDKCIALVLSAYETENRLN 361

Query: 361 AALELLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVS 403
           AALELLIDLEKDN++V KEAS+ILAAWLKRLGVVEE+E+VLREYTAKEVS
Sbjct: 362 AALELLIDLEKDNLVVRKEASEILAAWLKRLGVVEEVELVLREYTAKEVS 411

[Close]

BLAST of IVF0023452 vs. NCBI nr
Match: XP_022980308.1 (pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980309.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980310.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980311.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980312.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980313.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima])

HSP 1 Score: 651 bits (1679), Expect = 6.59e-233
Identity = 335/410 (81.71%), Postives = 369/410 (90.00%), Query Frame = 0


Query: 1   MHISTSNILYQLH--LPLVNGTSNTSSSRYWKDSI-----VLNSRRRCSQMATVTAIVDE 60
           M  S  NILYQ+H   PLVNGT+ +S S Y +        VL+ RR C Q+ATV AIV+E
Sbjct: 1   MGTSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRTCYQLATVAAIVEE 60

Query: 61  LHKLESEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSD 120
           +HKLES REKPRFRWVEVG +ITE QKQAISQLPPKMTK+CKAVMKQIICF PQ G LSD
Sbjct: 61  VHKLESGREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFLPQNGHLSD 120

Query: 121 MLAAWVRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGK 180
           MLAAWVRIMKP+RADWLSVLKHLRIL+HPLYI+VAEAALVE TFEA+TRDYTKIIH+YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180

Query: 181 QNQLEDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRS 240
           QNQLEDAE++LL+MRERGFACDQITLTTMIHIYSKAD+L LAKQTFEELKLLE+ LD+RS
Sbjct: 181 QNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELNLAKQTFEELKLLEEPLDRRS 240

Query: 241 YGAMIMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQ 300
           Y AMIMA+VRAG+PEEGE ILKEMD KDIYAGSEVYKALLRAYSMA +AEGAQRVFDAIQ
Sbjct: 241 YDAMIMAFVRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300

Query: 301 LAAIPPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLN 360
           LAAIPPD+KLCGLL+NAYLMAGQS+KAQIAFDNMRRAG+EPSDKCIAL LSAYEKENRLN
Sbjct: 301 LAAIPPDDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360

Query: 361 AALELLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVS 403
           AALELLIDLEK+ +MVGKEAS++LAAWLKRLGVVEE+E+VLREY  KE S
Sbjct: 361 AALELLIDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 410

[Close]

BLAST of IVF0023452 vs. TAIR 10
Match: AT1G01970.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 449.9 bits (1156), Expect = 2.2e-126
Identity = 219/394 (55.58%), Postives = 304/394 (77.16%), Query Frame = 0


Query: 10  YQLHLPLVNGTSNTSSSRYWKDSIVLNS--RRRCSQMATVTAIVDELHKLESEREKPRFR 69
           + L  PLV          + ++ +++ S   R CS     +  + E+ + E   +   F 
Sbjct: 12  FGLKCPLVIARHRLYHRMFRRNPLLVESHLNRLCSCKCNASLAIGEVVEKEDAEQSRSFN 71

Query: 70  WVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVRIMKPERA 129
           W +VG N+TE Q +AI+++P KM+K+C+A+M+QIICFSP+KG   D+L AW+R M P RA
Sbjct: 72  WADVGLNLTEEQDEAITRIPIKMSKRCQALMRQIICFSPEKGSFCDLLGAWLRRMNPIRA 131

Query: 130 DWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDAEKVLLTM 189
           DWLS+LK L+ L+ P YI+VAE +L++ +FEAN RDYTKIIH+YGK NQ+EDAE+ LL+M
Sbjct: 132 DWLSILKELKNLDSPFYIKVAEFSLLQDSFEANARDYTKIIHYYGKLNQVEDAERTLLSM 191

Query: 190 RERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMAYVRAGLP 249
           + RGF  DQ+TLT M+ +YSKA   KLA++TF E+KLL + LD RSYG+MIMAY+RAG+P
Sbjct: 192 KNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEIKLLGEPLDYRSYGSMIMAYIRAGVP 251

Query: 250 EEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPPDEKLCGLL 309
           E+GE +L+EMD+++I AG EVYKALLR YSM GDAEGA+RVFDA+Q+A I PD KLCGLL
Sbjct: 252 EKGESLLREMDSQEICAGREVYKALLRDYSMGGDAEGAKRVFDAVQIAGITPDVKLCGLL 311

Query: 310 MNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLIDLEKDNV 369
           +NAY ++GQS+ A++AF+NMR+AGI+ +DKC+AL L+AYEKE +LN AL  L++LEKD++
Sbjct: 312 INAYSVSGQSQNARLAFENMRKAGIKATDKCVALVLAAYEKEEKLNEALGFLVELEKDSI 371

Query: 370 MVGKEASQILAAWLKRLGVVEEIEIVLREYTAKE 402
           M+GKEAS +LA W K+LGVVEE+E++LRE+++ +
Sbjct: 372 MLGKEASAVLAQWFKKLGVVEEVELLLREFSSSQ 405

[Close]

BLAST of IVF0023452 vs. TAIR 10
Match: AT1G19520.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 247.3 bits (630), Expect = 2.1e-65
Identity = 136/330 (41.21%), Postives = 205/330 (62.12%), Query Frame = 0


Query: 67  RWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKG-ELSDMLAAWVRIMKPE 126
           +WVE+   I E +++A  + P  +T KCK VM+++   S Q+G + S +LA W  +++P 
Sbjct: 291 KWVEMADKIHEAEEEADWREPKPVTGKCKLVMEKL--ESLQEGDDPSGLLAEWAELLEPN 350

Query: 127 RADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDAEKVLL 186
           R DW++++  LR  N   Y++VAE  L E +F A+  DY+K+IH + K+N +ED E++L 
Sbjct: 351 RVDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILK 410

Query: 187 TMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAMIMAYVRAG 246
            M + G   D +T T ++H+YSK+   + A + FE LK      D++ Y AMI+ YV AG
Sbjct: 411 KMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAG 470

Query: 247 LPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAIPP-DEKLC 306
            P+ GE+++KEM AK++ A  EVY ALLRAY+  GDA GA  +  ++Q A+  P   +  
Sbjct: 471 KPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAY 530

Query: 307 GLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALELLIDLEK 366
            L + AY  AGQ  KA+  FD MR+ G +P DKCIA  + AY+ EN L+ AL LL+ LEK
Sbjct: 531 SLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEK 590

Query: 367 DNVMVGKEASQILAAWLKRLGVVEEIEIVL 395
           D + +G     +L  W+  LG++EE E +L
Sbjct: 591 DGIEIGVITYTVLVDWMANLGLIEEAEQLL 618

[Close]

BLAST of IVF0023452 vs. TAIR 10
Match: AT2G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 8.2e-17
Identity = 60/224 (26.79%), Postives = 107/224 (47.77%), Query Frame = 0


Query: 173 KQNQLEDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKR 232
           ++   E+A  V   M+         T   MI++Y KA K  ++ + + E++  +   +  
Sbjct: 241 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 300

Query: 233 SYGAMIMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAI 292
           +Y A++ A+ R GL E+ E+I +++    +     VY AL+ +YS AG   GA  +F  +
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360

Query: 293 QLAAIPPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRL 352
           Q     PD     ++++AY  AG    A+  F+ M+R GI P+ K   L LSAY K   +
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420

Query: 353 NAALELLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLRE 397
                ++ ++ ++ V         +     RLG   ++E +L E
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464

[Close]

BLAST of IVF0023452 vs. TAIR 10
Match: AT2G35130.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 8.2e-17
Identity = 60/224 (26.79%), Postives = 107/224 (47.77%), Query Frame = 0


Query: 173 KQNQLEDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKR 232
           ++   E+A  V   M+         T   MI++Y KA K  ++ + + E++  +   +  
Sbjct: 263 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 322

Query: 233 SYGAMIMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAI 292
           +Y A++ A+ R GL E+ E+I +++    +     VY AL+ +YS AG   GA  +F  +
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382

Query: 293 QLAAIPPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRL 352
           Q     PD     ++++AY  AG    A+  F+ M+R GI P+ K   L LSAY K   +
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442

Query: 353 NAALELLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLRE 397
                ++ ++ ++ V         +     RLG   ++E +L E
Sbjct: 443 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 486

[Close]

BLAST of IVF0023452 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 2.6e-15
Identity = 55/245 (22.45%), Postives = 113/245 (46.12%), Query Frame = 0


Query: 152 LVEITFEANTRDYTKIIHHYGKQNQLEDAEKVLLTMRERGFACDQITLTTMIHIYSKADK 211
           ++E     N   ++ +I  + K+ +L +AEK+   M +R    D  T +++I+ +   D+
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375

Query: 212 LKLAKQTFEELKLLEQSLDKRSYGAMIMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKA 271
           L  AK  FE +   +   +  +Y  +I  + +A   EEG ++ +EM  + +   +  Y  
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435

Query: 272 LLRAYSMAGDAEGAQRVFDAIQLAAIPPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAG 331
           L++    AGD + AQ++F  +    +PPD     +L++     G+  KA + F+ ++++ 
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495

Query: 332 IEPSDKCIALALSAYEKENRLNAALELLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIE 391
           +EP      + +    K  ++    +L   L    V         + +   R G+ EE +
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555

Query: 392 IVLRE 397
            + RE
Sbjct: 556 ALFRE 560

The following BLAST results are available for this feature:

BLAST of IVF0023452 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPC4	3.0e-125	55.58	Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX...	[more]
Q940Z1	9.7e-39	43.06	Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana OX...	[more]
O82178	1.2e-15	26.79	Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX...	[more]
Q9LQ14	3.7e-14	22.45	Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop...	[more]
O64624	1.1e-13	26.07	Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop...	[more]

BLAST of IVF0023452 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D032	7.3e-223	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3AWA7	1.6e-222	99.75	pentatricopeptide repeat-containing protein At1g01970 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7U612	1.6e-222	99.75	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0L7L8	1.6e-209	93.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126080 PE=4 SV=1	[more]
A0A6J1IR15	6.3e-182	81.71	pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita maxima OX=366...	[more]

BLAST of IVF0023452 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK17533.1	8.46e-287	100.00	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008438151.1	2.42e-286	99.75	PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Cucumis melo] ...	[more]
XP_004134345.1	2.84e-269	93.56	pentatricopeptide repeat-containing protein At1g01970 [Cucumis sativus] >XP_0116...	[more]
XP_038903030.1	8.15e-248	86.10	pentatricopeptide repeat-containing protein At1g01970 [Benincasa hispida] >XP_03...	[more]
XP_022980308.1	6.59e-233	81.71	pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022...	[more]

BLAST of IVF0023452 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01970.1	2.2e-126	55.58	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G19520.1	2.1e-65	41.21	pentatricopeptide (PPR) repeat-containing protein	[more]
AT2G35130.1	8.2e-17	26.79	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G35130.2	8.2e-17	26.79	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62930.1	2.6e-15	22.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 268..291 e-value: 0.13 score: 12.5 coord: 306..332 e-value: 0.18 score: 12.1 coord: 233..261 e-value: 1.5E-6 score: 28.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 233..263 e-value: 1.7E-5 score: 22.7 coord: 164..195 e-value: 6.9E-6 score: 23.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 164..205 e-value: 6.8E-8 score: 32.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 300..334 score: 9.678885
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 265..299 score: 8.692369
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 160..194 score: 9.613118
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 230..264 score: 10.237912
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 296..391 e-value: 4.8E-8 score: 34.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 145..295 e-value: 4.2E-29 score: 103.9
IPR044657	Pentatricopeptide repeat-containing protein NFD5-like	PANTHER	PTHR46862	OS07G0661900 PROTEIN	coord: 40..403
None	No IPR available	PANTHER	PTHR46862:SF3	OS07G0661900 PROTEIN	coord: 40..403

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023452.2	IVF0023452.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding