IVF0023450 (gene) Melon (IVF77) v1

Overview


Name	IVF0023450
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription termination factor MTEF1
Location	tig00000060: 508771 .. 510124 (-)
RNA-Seq Expression	IVF0023450
Synteny	IVF0023450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTATTTTTTTTGTTCTCTCTATCTACCACTCTGCCGATCGCCGATGTCCCGTCGCCGCCCTTCTTTTTTTCTCTTTTCTCATAGCTTCATCCTCTTGTGAGGCATTTGTAGTTTCTCCCCTTCTTCTTCTCAACAAGGTACCAACACCTCACTCTTCCTTCTCCTCCCACTTCTTTCACTCATGTCTTACTTGTTTCGCAGAATCCTTCTACTTAGATCTCCATCGTCTGTCTTTTCTCACGGATTTTCCGAATGTCCGTTGAAATCTCTCAGATTCTTATCGACCTCTTCTGAGGTTGTATCATCTCCTAAATCTGCTTCATTGGCTTCTAACGCTGTTTGGCTCAAGAATAATCGGAAGGATGTGATTGCGTTACTTGCGAATCATGGATTCTCTCAATCACAAATCTCTGACCTTGCCAAGAGGTTGCCTCAAATTTTTTCTGCGAACCCCGAGGAAAGCCTATTGCCCAAATTGTTGTTTCTTCAATCTAAAGGTCTTTCTTCCCCACAGATTGTCAAATCAGTATGTGCATTTCCTTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCCAGCCTTCGATTACATTCAAGCCGTGCTTGGAACTGAGGAGAAGGCTGTCGCTGCCATTAAGCGCTTTGCGGGTATTCTCACTCAGGATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAACTTATCTTCAGCAGCAGCCTAGAATGTTCTTCGTAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTGAACGATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAGAATCCATGGGGTATGAGAGCTTCTGAGGATAAGATCAATGATGTAATGGATTTTTTTGTCAACAAAATTGGATGTGAATCATTTTTGGTTGCTAGAAGACCAGTTTTAATTGCACTTAGTTTGAAGAAGAGGATTCTGCCTAGAGGTTACATATATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAATTTTTCTTCGTTGTTTCACTGTTCTGAAAACCGTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGACTTGTATAAACAGAAATTAATGGATTTAGAAGATGAACAAGTTCGATCTCCTTGAAATTTAACTGTTTTGTTAGTTTATGTGTAGTGAC

mRNA sequence

CCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTATTTTTTTTGTTCTCTCTATCTACCACTCTGCCGATCGCCGATGTCCCGTCGCCGCCCTTCTTTTTTTCTCTTTTCTCATAGCTTCATCCTCTTGTGAGGCATTTGTAGTTTCTCCCCTTCTTCTTCTCAACAAGGTACCAACACCTCACTCTTCCTTCTCCTCCCACTTCTTTCACTCATGTCTTACTTGTTTCGCAGAATCCTTCTACTTAGATCTCCATCGTCTGTCTTTTCTCACGGATTTTCCGAATGTCCGTTGAAATCTCTCAGATTCTTATCGACCTCTTCTGAGGTTGTATCATCTCCTAAATCTGCTTCATTGGCTTCTAACGCTGTTTGGCTCAAGAATAATCGGAAGGATGTGATTGCGTTACTTGCGAATCATGGATTCTCTCAATCACAAATCTCTGACCTTGCCAAGAGGTTGCCTCAAATTTTTTCTGCGAACCCCGAGGAAAGCCTATTGCCCAAATTGTTGTTTCTTCAATCTAAAGGTCTTTCTTCCCCACAGATTGTCAAATCAGTATGTGCATTTCCTTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCCAGCCTTCGATTACATTCAAGCCGTGCTTGGAACTGAGGAGAAGGCTGTCGCTGCCATTAAGCGCTTTGCGGGTATTCTCACTCAGGATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAACTTATCTTCAGCAGCAGCCTAGAATGTTCTTCGTAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTGAACGATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAGAATCCATGGGGTATGAGAGCTTCTGAGGATAAGATCAATGATGTAATGGATTTTTTTGTCAACAAAATTGGATGTGAATCATTTTTGGTTGCTAGAAGACCAGTTTTAATTGCACTTAGTTTGAAGAAGAGGATTCTGCCTAGAGGTTACATATATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAATTTTTCTTCGTTGTTTCACTGTTCTGAAAACCGTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGACTTGTATAAACAGAAATTAATGGATTTAGAAGATGAACAAGTTCGATCTCCTTGAAATTTAACTGTTTTGTTAGTTTATGTGTAGTGAC

Coding sequence (CDS)

ATGTCTTACTTGTTTCGCAGAATCCTTCTACTTAGATCTCCATCGTCTGTCTTTTCTCACGGATTTTCCGAATGTCCGTTGAAATCTCTCAGATTCTTATCGACCTCTTCTGAGGTTGTATCATCTCCTAAATCTGCTTCATTGGCTTCTAACGCTGTTTGGCTCAAGAATAATCGGAAGGATGTGATTGCGTTACTTGCGAATCATGGATTCTCTCAATCACAAATCTCTGACCTTGCCAAGAGGTTGCCTCAAATTTTTTCTGCGAACCCCGAGGAAAGCCTATTGCCCAAATTGTTGTTTCTTCAATCTAAAGGTCTTTCTTCCCCACAGATTGTCAAATCAGTATGTGCATTTCCTTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCCAGCCTTCGATTACATTCAAGCCGTGCTTGGAACTGAGGAGAAGGCTGTCGCTGCCATTAAGCGCTTTGCGGGTATTCTCACTCAGGATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAACTTATCTTCAGCAGCAGCCTAGAATGTTCTTCGTAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTGAACGATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAGAATCCATGGGGTATGAGAGCTTCTGAGGATAAGATCAATGATGTAATGGATTTTTTTGTCAACAAAATTGGATGTGAATCATTTTTGGTTGCTAGAAGACCAGTTTTAATTGCACTTAGTTTGAAGAAGAGGATTCTGCCTAGAGGTTACATATATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAATTTTTCTTCGTTGTTTCACTGTTCTGAAAACCGTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGACTTGTATAAACAGAAATTAATGGATTTAGAAGATGAACAAGTTCGATCTCCTTGA

Protein sequence

MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRKDVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFPCVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVPDSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSLKKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLMDLEDEQVRSP

Homology

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BLAST of IVF0023450 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 9.2e-04
Identity = 36/146 (24.66%), Postives = 65/146 (44.52%), Query Frame = 0


Query: 55  LKNNRKDVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFL-QSKGLSSPQIV 114
           ++NN K  I+ L   G   S+I  +    P +FS + E SL P + +L +  G+    + 
Sbjct: 251 VENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVG 310

Query: 115 KSVCAFPCVLTGSLNKRIIPAFDYIQAVLGT-EEKAVAAIKRFAGILTQDLRISVGPNIE 174
           K V   P +L   L+      + ++   LG   +  V  +K+   +L   +     P I 
Sbjct: 311 KVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRIN 370

Query: 175 ILKQIGVPDSNISTYLQQQPRMFFVS 199
            L+ IG+ +S+I   L    ++  +S
Sbjct: 371 FLRSIGMCNSDILKVLTSLTQVLSLS 396

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BLAST of IVF0023450 vs. ExPASy TrEMBL
Match: A0A5A7U2M1 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00920 PE=3 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 4.5e-203
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60
           MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60

Query: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120
           DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP
Sbjct: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120

Query: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180
           CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240
           DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV
Sbjct: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300
           EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300

Query: 301 KKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLMDL 360
           KKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLMDL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLMDL 360

Query: 361 EDEQVRSP 369
           EDEQVRSP
Sbjct: 361 EDEQVRSP 368

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BLAST of IVF0023450 vs. ExPASy TrEMBL
Match: A0A1S4DSK2 (uncharacterized protein LOC103483822 OS=Cucumis melo OX=3656 GN=LOC103483822 PE=3 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 1.7e-181
Identity = 339/368 (92.12%), Postives = 340/368 (92.39%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60
           MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60

Query: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120
           DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSK               
Sbjct: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSK--------------- 120

Query: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180
                        AFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP
Sbjct: 121 -------------AFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240
           DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNP+RLQFLVAVFALRSMTKSTWDKKV
Sbjct: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300
           EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300

Query: 301 KKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLMDL 360
           KKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLMDL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLMDL 340

Query: 361 EDEQVRSP 369
           EDEQVRSP
Sbjct: 361 EDEQVRSP 340

[Close]

BLAST of IVF0023450 vs. ExPASy TrEMBL
Match: A0A5A7U124 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00780 PE=3 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.7e-157
Identity = 296/363 (81.54%), Postives = 319/363 (87.88%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60
           MSYLFRRILLLRSPSSVFSHGFSE PLKSLRFLSTSSE+VSSPKSASLASNAV L+NNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120
            VI LLANHGFSQSQISD+ +R PQI +ANPE+ LLPKLLF QSKGLSSP+I K VC FP
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180
            VLTGSLNKRII  FDYIQAVLG+EEK +AAIK+FAGIL +DL+ISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240
           DSNI  YLQ QPR+F +SSIRFKEIVERVTEMGFNP+RLQFLVAVFALR+MTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300
           EVYRKWGLSEEEI LAF+++PW M  SEDKIN  MDFFVNKIGCES  VARRP LI+LSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYIYQVLLSKGLIK---NFSSLFHCSENRFIEKFINPHK-EQIPGLLDLYKQK 360
           KKR+ PRGY+YQVLL KGLIK   N       SE RFIEKFINPHK EQIPGLL+LYKQK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

[Close]

BLAST of IVF0023450 vs. ExPASy TrEMBL
Match: A0A1S3AYM0 (uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=3 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.7e-157
Identity = 296/363 (81.54%), Postives = 319/363 (87.88%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60
           MSYLFRRILLLRSPSSVFSHGFSE PLKSLRFLSTSSE+VSSPKSASLASNAV L+NNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120
            VI LLANHGFSQSQISD+ +R PQI +ANPE+ LLPKLLF QSKGLSSP+I K VC FP
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180
            VLTGSLNKRII  FDYIQAVLG+EEK +AAIK+FAGIL +DL+ISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240
           DSNI  YLQ QPR+F +SSIRFKEIVERVTEMGFNP+RLQFLVAVFALR+MTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300
           EVYRKWGLSEEEI LAF+++PW M  SEDKIN  MDFFVNKIGCES  VARRP LI+LSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYIYQVLLSKGLIK---NFSSLFHCSENRFIEKFINPHK-EQIPGLLDLYKQK 360
           KKR+ PRGY+YQVLL KGLIK   N       SE RFIEKFINPHK EQIPGLL+LYKQK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

[Close]

BLAST of IVF0023450 vs. ExPASy TrEMBL
Match: A0A1S3AX02 (transcription termination factor MTEF1, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483819 PE=3 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 8.6e-154
Identity = 288/362 (79.56%), Postives = 316/362 (87.29%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60
           M  LFRRILLLRSPSSVFSHGFSE PLKSLR+LSTSSE+VSSPKSASLASN V LKNN K
Sbjct: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60

Query: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120
            VIALLANHGFSQSQISDLAKR PQI  ANPE+ LLPKLLFLQS+G SSP+I K VCA P
Sbjct: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP 120

Query: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180
             +  SLNKRIIPAFDYIQAVLG++EKA+AAI+RF GIL+ DLR+SVGPNIEILKQ GVP
Sbjct: 121 VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180

Query: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240
           DS IS+YLQ+QP+MF  SSIRFKEIVERV EMGFNP+RLQFLVAVFALRSMTKS+WDKKV
Sbjct: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300
           EVYRKWGLSEEEIRLAFRKNP  M  SE+ IND MDFFVN+IGCES  +ARRP L A SL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300

Query: 301 KKRILPRGYIYQVLLSKGLI---KNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKL 360
           KKRILPRGY++QVLLSKGLI   + F+ +F C EN FIEK INPHK+QIPGLL+LYKQK+
Sbjct: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI 360

[Close]

BLAST of IVF0023450 vs. NCBI nr
Match: KAA0049484.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16164.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 716 bits (1847), Expect = 8.02e-260
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60
           MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60

Query: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120
           DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP
Sbjct: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120

Query: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180
           CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240
           DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV
Sbjct: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300
           EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300

Query: 301 KKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLMDL 360
           KKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLMDL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLMDL 360

Query: 361 EDEQVRSP 368
           EDEQVRSP
Sbjct: 361 EDEQVRSP 368

[Close]

BLAST of IVF0023450 vs. NCBI nr
Match: XP_016898977.1 (PREDICTED: uncharacterized protein LOC103483822 [Cucumis melo])

HSP 1 Score: 644 bits (1661), Expect = 6.24e-232
Identity = 339/368 (92.12%), Postives = 340/368 (92.39%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60
           MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60

Query: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120
           DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSK               
Sbjct: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSK--------------- 120

Query: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180
                        AFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP
Sbjct: 121 -------------AFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240
           DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNP+RLQFLVAVFALRSMTKSTWDKKV
Sbjct: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300
           EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300

Query: 301 KKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLMDL 360
           KKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLMDL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKLMDL 340

Query: 361 EDEQVRSP 368
           EDEQVRSP
Sbjct: 361 EDEQVRSP 340

[Close]

BLAST of IVF0023450 vs. NCBI nr
Match: XP_031738238.1 (uncharacterized protein LOC101209993 isoform X1 [Cucumis sativus] >KAE8650390.1 hypothetical protein Csa_009998 [Cucumis sativus])

HSP 1 Score: 582 bits (1500), Expect = 9.12e-207
Identity = 297/368 (80.71%), Postives = 329/368 (89.40%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60
           MS +FR ILLLRSPSS FSHGFS+ PLKSLR+L TSSE+VSSPKSASL SN V L NN K
Sbjct: 1   MSNVFRTILLLRSPSSAFSHGFSDSPLKSLRYLCTSSEIVSSPKSASLPSNPVQLNNNSK 60

Query: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120
            VI LLANHGFS+SQISDLAKR P+IFS N E+ L PKLLF QSKGLSSP+IVK VC+ P
Sbjct: 61  AVIGLLANHGFSESQISDLAKRYPKIFSMNTEKILSPKLLFFQSKGLSSPEIVKFVCSVP 120

Query: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180
           CVLTGSLNKRIIP+FDYIQAVLG+EEK + AIKRF GIL  DLR SVGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180

Query: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240
           DSNIS+YLQ+QP+MF  SSIRFKE VERVTEMGFNP+RLQF+VAVFALRSMTKSTWDKK+
Sbjct: 181 DSNISSYLQRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDKKL 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300
           EVYRKWGLSEEEIR +FRKNPWGMRASEDKINDVM FFVNKIGCE F VARRP+LI+LSL
Sbjct: 241 EVYRKWGLSEEEIRFSFRKNPWGMRASEDKINDVMGFFVNKIGCEPFFVARRPLLISLSL 300

Query: 301 KKRILPRGYIYQVLLSKGLIK---NFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKL 360
           KKRI+PRGY+YQ L+SKGL+K   NF++LF+ SE RFIEK+I+PHKEQIPGLL+LY+QKL
Sbjct: 301 KKRIIPRGYVYQALVSKGLVKKHANFTTLFNSSEKRFIEKYISPHKEQIPGLLELYEQKL 360

Query: 361 MDLEDEQV 365
           MDLEDEQV
Sbjct: 361 MDLEDEQV 368

[Close]

BLAST of IVF0023450 vs. NCBI nr
Match: XP_008439382.1 (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo] >KAA0049472.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16151.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 564 bits (1453), Expect = 7.81e-200
Identity = 296/363 (81.54%), Postives = 319/363 (87.88%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60
           MSYLFRRILLLRSPSSVFSHGFSE PLKSLRFLSTSSE+VSSPKSASLASNAV L+NNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120
            VI LLANHGFSQSQISD+ +R PQI +ANPE+ LLPKLLF QSKGLSSP+I K VC FP
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180
            VLTGSLNKRII  FDYIQAVLG+EEK +AAIK+FAGIL +DL+ISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240
           DSNI  YLQ QPR+F +SSIRFKEIVERVTEMGFNP+RLQFLVAVFALR+MTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300
           EVYRKWGLSEEEI LAF+++PW M  SEDKIN  MDFFVNKIGCES  VARRP LI+LSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYIYQVLLSKGLIK---NFSSLFHCSENRFIEKFINPHKE-QIPGLLDLYKQK 359
           KKR+ PRGY+YQVLL KGLIK   N       SE RFIEKFINPHKE QIPGLL+LYKQK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

[Close]

BLAST of IVF0023450 vs. NCBI nr
Match: XP_031738239.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sativus] >KAE8650392.1 hypothetical protein Csa_010055 [Cucumis sativus])

HSP 1 Score: 557 bits (1435), Expect = 5.53e-197
Identity = 290/367 (79.02%), Postives = 319/367 (86.92%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60
           MS  FR ILLLRSPSS+FSHGFS+ P KSLR+LSTSSE+VSSPKSASL SNAV L NN K
Sbjct: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60

Query: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120
            VI LLANHGFS+SQISDLAKR PQI S NPE+ L PKLLF QSKGLSSP+IVK VC+ P
Sbjct: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120

Query: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180
           CVLTGSLNKRIIP+FDYIQAVLG+EEK + AIKRF GIL  DLR SVGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180

Query: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240
           DSNIS+YLQ+QP+MF  SSIRFK+ VERVTEMGFNP+RLQF+VAVFALRSMTKSTWD+KV
Sbjct: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300
           E YRKWGLSEEEIRLAFRKNP  M ASEDKIN  MDFFVNK+GCE FLVAR P L++ SL
Sbjct: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300

Query: 301 KKRILPRGYIYQVLLSKGLIK---NFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKL 360
           KKRILPRGY+YQVL+SK LIK   +F+  F+ S N FI+KFINPHKEQIP LL+LYK+KL
Sbjct: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360

Query: 361 MDLEDEQ 364
           MDLEDEQ
Sbjct: 361 MDLEDEQ 367

[Close]

BLAST of IVF0023450 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 221.9 bits (564), Expect = 8.7e-58
Identity = 122/318 (38.36%), Postives = 199/318 (62.58%), Query Frame = 0


Query: 42  SPKSASLASNAVWLKNNRK--DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKL 101
           SP SA++AS  + L +  +   V+ LL +HGF+ +QIS L K+ P +  AN E  LLPKL
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 102 LFLQSKGLSSPQIVKSVCAFPCVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGIL 161
            F  S G+S   + +++ + P +LT SL  ++IP+++++++VL ++EK VAA++R   + 
Sbjct: 142 SFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVF 201

Query: 162 TQDLRISVGPNIEILKQIGVPDSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERL 221
            +D   ++ PNI  + + GVP+  I   L   P      +  F+ I ++  EMGFNP++ 
Sbjct: 202 LEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 222 QFLVAVFALRSM-TKSTWDKKVEVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFF 281
            F++A+ AL     KS WDK  EVY++WG SE++I  AF+K+P  M  SE KIN  M++F
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 282 VNKIGCESFLVARRPVLIALSLKKRILPRGYIYQVLLSKGLIK---NFSSLFHCSENRFI 341
           VN++      +A+ PV++  SL+KRI+PR  + +VL+S GL+K   + +SL    E  F+
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

Query: 342 EKFINPHKEQIPGLLDLY 354
           EK +  ++E++P L++LY
Sbjct: 382 EKLVIKYEEELPELMNLY 399

[Close]

BLAST of IVF0023450 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 190.3 bits (482), Expect = 2.8e-48
Identity = 117/361 (32.41%), Postives = 206/361 (57.06%), Query Frame = 0


Query: 1   MSYLFRRILLLRSPSSVFSHGFSE---CPLKSLRFLSTSSEVVSSPKSASLASNAVWLKN 60
           + +L  RI  L S S V S    +   C L+S            S +SA   S  V L +
Sbjct: 26  LGFLVGRIRTLCSVSQVKSENLEKQKPC-LESFTVSYLVDSCGLSLESAKSNSRFVKLVS 85

Query: 61  NRK--DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKS 120
           ++K   V+AL  +HGF+  QI+ + K  P++ S +PE+ + PKL+F  S G S+    K 
Sbjct: 86  SKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKM 145

Query: 121 VCAFPCVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRIS--VGPNIEI 180
           + + P +L+ SL+KR+IP +D ++++L  EE  V  +KR  GI    L+I+  V   + I
Sbjct: 146 ISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKR--GIRCFSLKITHCVSLRVSI 205

Query: 181 LKQIGVPDSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTK 240
            +++GVPD +I   +Q  P  FF    RF E++ RV   GF+P++  F+ A+ A    ++
Sbjct: 206 CRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSE 265

Query: 241 STWDKKVEVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRP 300
           S  ++K ++++ +G S+E+   A  + P  +  S++KI   +++ VN IG ++  +  RP
Sbjct: 266 SAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARP 325

Query: 301 VLIALSLKKRILPRGYIYQVLLSKGLIK----NFSSLFHCSENRFIEKFINPHKEQIPGL 351
           V+++LS++KRI PR  +  +LLSKGL+K    N+ ++     + F++KF+  +++++P L
Sbjct: 326 VVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQL 383

[Close]

BLAST of IVF0023450 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 152.5 bits (384), Expect = 6.5e-37
Identity = 93/313 (29.71%), Postives = 175/313 (55.91%), Query Frame = 0


Query: 60  KDVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAF 119
           + VI +L ++ FS +QI    +  P++   N E+ L PKL F +  G +   + K V   
Sbjct: 72  RSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQN 131

Query: 120 PCVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAG--ILTQDLRISVGPNIEILKQI 179
             V+  SL K++IP  + +++++  + + +  I    G  +L++D  + + PNI  L+  
Sbjct: 132 SSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETC 191

Query: 180 GVPDSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWD 239
           G+  S +++ L++QPR+F +S  + +  V R  ++GF       + AV +L S+++ T+D
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251

Query: 240 KKVEVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIA 299
           +KV+++   G SE+EI    R++P  +R SEDK+    +F++ ++G E   +A+RP +++
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311

Query: 300 LSLKKRILPRGYIYQVLLSKGLI-------KNFSSLFHCSENRFIEKFINPHKEQIPGLL 359
            +L+KR++PR  + Q+L  KGL+       KN   +   +E  F+EK++    ++I   L
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEEL 371

Query: 360 DLYKQKLMDLEDE 364
            L   K + L DE
Sbjct: 372 -LVAYKCVCLVDE 383

[Close]

BLAST of IVF0023450 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 140.6 bits (353), Expect = 2.6e-33
Identity = 100/346 (28.90%), Postives = 173/346 (50.00%), Query Frame = 0


Query: 56  KNNRKDVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKS 115
           KNN   V+ LL +HGF+ SQIS + +  PQ+  A+ E+SL PKL FLQS+G SS +I + 
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEI 140

Query: 116 VCAFPCVLTGSLNKRIIPAFDYIQAVL----GTEEKAVAAIKRFAGILTQDLRISVGPNI 175
           V + P +L    +K I   +D+I+  L       EK   ++ +  G L   +R     N+
Sbjct: 141 VSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQ--GNLENKIR-----NV 200

Query: 176 EILKQIGVPDSNISTYL--QQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALR 235
            +L+++G+P   + + L    QP        +F+E +++V EMGF+P   +F+ A+  + 
Sbjct: 201 SVLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIY 260

Query: 236 SMTKSTWDKKVEVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVM-------------- 295
            M + T ++KV +Y+  G    ++  +F+K P  +R SE K+ D +              
Sbjct: 261 KMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFA 320

Query: 296 ---------------------DFFVNKIGCESFLVARRPVLIALSLKKRILPRGYIYQVL 355
                                +F V K+      V   P +   SL+KRI+PRG + + L
Sbjct: 321 KMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKAL 380

[Close]

BLAST of IVF0023450 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 140.6 bits (353), Expect = 2.6e-33
Identity = 100/346 (28.90%), Postives = 173/346 (50.00%), Query Frame = 0


Query: 56  KNNRKDVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKS 115
           KNN   V+ LL +HGF+ SQIS + +  PQ+  A+ E+SL PKL FLQS+G SS +I + 
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEI 140

Query: 116 VCAFPCVLTGSLNKRIIPAFDYIQAVL----GTEEKAVAAIKRFAGILTQDLRISVGPNI 175
           V + P +L    +K I   +D+I+  L       EK   ++ +  G L   +R     N+
Sbjct: 141 VSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQ--GNLENKIR-----NV 200

Query: 176 EILKQIGVPDSNISTYL--QQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALR 235
            +L+++G+P   + + L    QP        +F+E +++V EMGF+P   +F+ A+  + 
Sbjct: 201 SVLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIY 260

Query: 236 SMTKSTWDKKVEVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVM-------------- 295
            M + T ++KV +Y+  G    ++  +F+K P  +R SE K+ D +              
Sbjct: 261 KMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFA 320

Query: 296 ---------------------DFFVNKIGCESFLVARRPVLIALSLKKRILPRGYIYQVL 355
                                +F V K+      V   P +   SL+KRI+PRG + + L
Sbjct: 321 KMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKAL 380

The following BLAST results are available for this feature:

BLAST of IVF0023450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FM80	9.2e-04	24.66	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of IVF0023450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2M1	4.5e-203	100.00	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DSK2	1.7e-181	92.12	uncharacterized protein LOC103483822 OS=Cucumis melo OX=3656 GN=LOC103483822 PE=...	[more]
A0A5A7U124	3.7e-157	81.54	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AYM0	3.7e-157	81.54	uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=...	[more]
A0A1S3AX02	8.6e-154	79.56	transcription termination factor MTEF1, chloroplastic-like isoform X1 OS=Cucumis...	[more]

BLAST of IVF0023450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049484.1	8.02e-260	100.00	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16164.1 tr...	[more]
XP_016898977.1	6.24e-232	92.12	PREDICTED: uncharacterized protein LOC103483822 [Cucumis melo]	[more]
XP_031738238.1	9.12e-207	80.71	uncharacterized protein LOC101209993 isoform X1 [Cucumis sativus] >KAE8650390.1 ...	[more]
XP_008439382.1	7.81e-200	81.54	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo] >KAA0049472.1 tra...	[more]
XP_031738239.1	5.53e-197	79.02	transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sa...	[more]

BLAST of IVF0023450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	8.7e-58	38.36	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	2.8e-48	32.41	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	6.5e-37	29.71	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	2.6e-33	28.90	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	2.6e-33	28.90	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 77..108 e-value: 0.0059 score: 25.8 coord: 149..180 e-value: 31.0 score: 13.5 coord: 254..285 e-value: 8.4 score: 15.4 coord: 113..145 e-value: 5.9 score: 15.9 coord: 286..320 e-value: 150.0 score: 10.2 coord: 185..215 e-value: 1000.0 score: 3.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 64..278 e-value: 1.2E-25 score: 90.1 coord: 233..334 e-value: 5.2E-11 score: 42.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 41..359
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 144..346 e-value: 3.5E-41 score: 143.1
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 41..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023450.1	IVF0023450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding