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IVF0023375 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTATCAGCATGGTCCGGGTCCTAGTTCCATATCTGGATCAAGTTCGAGTTCTGGGTTCCTGAACTCTCCTTTTGGTGATACCACTTACACCAAGGTCTTTGTTGGTGGGTTGGCCTGGGAGACTCAGAGCGAAACTATGAGGCGCTACTTTGAGCAGTTTGGGAGATTCTTGAGGCTGTTGTTATAACGGATAAGAATACAGGGAGATCCAAAGGATATGGTTTTGTGAGTATTAATGGTTTTTACTTTAATAGGTTTTTGTTAACTTTATACTTTGTTTCTACTTTCTAAAAGTAATAGCCTAAGAACATTCGTTTTGATACCTTTTCTTTTCTACCAAGCTAGTCGTATCTAATTGTTTGATCATTAATATCTATATTGTTGACATTGGAATGACCTGAACGTTTGTTCCTGTTTACATGGAGGGTTTTAGGTGACTTTCCGGGATCCAGAGTCTGCTAGAAGAGCTTGTGCAGACCCTACCCCAATTATTGATGGCAGGCGAGCAAATTGTAATCTAGCTTCACTTGGTCGGCCTCGTCCACCTATATCTTTTGGTATTATTTACTTATTTGGTCTTTTATTGCTCAGAAAATCATGTTGTTAGTTCCTGTCTTGTGTATTTTTGTATGATCGGGGATTTTTCTTGGCATATGCGTTTTGTTCAAAGGAATTAATATTCACAAATTCCTGTTTTCTGTTTTTTAAAGCTCTAGATTGGTTGGTCTTTACTTTTACACCACTGTTTCTTACAGGAACAGGACGTTTAAGACAGCCTGCAGTTTATGTTGGAGGCATGCAACCTAACAGGGGAACTTATATTGGAAATTTTGGCTATCAACAACCGGTTTCCTATGCTTATCAGCAGGGACTTGCATATCCTCCTTATGGGTATGTCTCTAAGGTTCCTCTTTGTGCATCCAAACCTGCCAATATATTCAAATTTTGTTATTTTGTATAACTCCAATCTTTTACGTTTTGCATTCCTATATCTCGACCTTTACATTTTGTAGTGTGACTCTGGGGATTTGTTCGCATTCAGAAGTTCGATATTATGATCTTTTATTTATTTTTCTTTTCTGGTTGCGATTAAATCTTATAGCAAATGAATGATATTGTCTAGTAACTTTAGATGTACATATACGCTTTCAGGTAGGGTATTTCATTTTTTGAGGACTACTACCTTGCATTTTTTTTTTTTTTTGACCTTATATCCTAGTTTTCATTGTTTCTTAAGATGGTTGATAGACACCACTTAGTTGGTATTCATTCACTGCACGCCAACTTAATGTTAGTATTTTTTTTTTGAAGTCATAAGGTATATTACCAATCACTATATGCAGCATTCCATGGGATATGTTTCTTTGTCACCTCCCAGAAATCAGGACTGGTACCTGATCAGTGATGTGACAAAGTAGGATTGGTAATTGCAGGAATAAGATAGAAGTTATACGAGGATGTGCCAAGACTAATGTAAATGAACGGGAAGAAGTATGGCTAGTATTATTGGAGAAGTTTCATATCTTGTTTTCACTTGCGTTTTATAGTTAATATTAAAAGTCAAGTTGGTAGGATTTGAGCTCTAGTCTCTAGTTAATTGGGATACCAAATATTTGTCTTCTGGTATCACAATGGACTATGGGTTGTTAAATGATTTCCTCCTGTTAAGTTTGCATTGTTCTGTTTATGCTACTACTTAAATTTCTGCTTTCATAATCCTATCTCTTGGAAATCTTTAAAATGTTTCCAATCATTCGTTTCCTTCCCATTTCTTTTGCAGTTATGCTACTTATGGACCTGAGTATGTCTACCCGCAGGTATCACTGTTGATATATTTACTTATGTCTGCAATTTTGTGTTTGGAGGGTGGATTTGGAAGTAGGGAAGGGTGATATGATGGGTGTCCTTAGAAATTTCTCAAGGTTTTTCATAGTTCTAGCATAATGTGCTCAGTGGTTTTGATTTTCTGTGTGTTGTATCCTTTGTCTAGGGTGGATACAACCCTTTCGTGGGTCAGCAATACCTGCAGATTTATGGAGTGCCTGGGTCAGCAAGCCCTACAATTTATCATTATGGACAATTAGGTCAAACAGTCCCCGGTGGTCATGGTTATGGAGCAGTACATGGATACGCGATGCCAAGTCCTCAGATTTTGCAGTTTAGTGGTCCTAATGTTAATGCTTTAACATCTTCTCCAATGCCTACTATTCAGGCACCATATCCTTCAGGTATTTTGCTTTGTATGATGATTTGATTACTCTTGATTACAACATCGAGTAATGTGAATTTTGACTAGTCTTTTAGGCATTTTTCCTCGAATGTCTTATTTTATTATCATCAATTGGATATTATCTGTGTATTTATGTGATCTTTTTTAGTTCCTCCACTGGTTTGGTCCTTTGGTCTTTTTCTCGAGGCCATTTTTTTTCCTTCAATCATTTAATCTTTTGACCGTGCCTTTTTTAATTTTTTTAAGAATAACCGGTAAAACTTGTGTCCAATCGTTGCATTGACTTAGTTATGTGATGATAGTACTCTGAAGGTTAAAAAAAAAAATTCTGCTTTGAAGTGGCACCATCCAGTGAAGACAGTGCCATAGTGGACTCGAGACTGGATATTTTCTGGGGACAGTGAAGATTTGCTTTTTTTTTTGGCTGTGAAAACTTCTTTCATTCTAGAGGAATGAAAGTGCAACAGATGGGGAAGCCATTCCTGGGGATATTGAAATTTGTGCTATATTTTTTATCATCTGATGTAGAATGGGGAAAACTTAAATAATGTGGTTTGGCATGTGAAGACATGCTTGATTAGAAAAACATGTTTGTTTCATCAGGGATTCCAGCACCTGTTGCAGCACAGCCACAGTTCGTTGTTCATTCTCCTTCTCAGTTCGTACAAGGTAGCGGTTCTGACCAAACATCTGGGTGAGGAGTTGATCAGGTAAACTTCAAATTTTTCTGTTTAGAATCAATATTTGAAATTTCTCTTCCTATCTTATCACCAGAAGTCTCTAACTGCAACTTGATGACATTTATAGGTATCAATAGATTGCAGCAGGACTTAGAGCAGCGGAACTGCTACTTGAGTGGCGGGCTTCGGATCTAGCCTTGCAAATAATTTATCATGCATTCTAGAGGTAGACTTATGTTCTGGGCATAGCTTTTTCGACAATTTCATATGTGATCAGGATGAAAACTATTTGAAAGCTGATGGTAAAATATTTTTGATGATTTCTTTGCCTGTCATATCATATTTCATATAAGCTTATAGCAGAATGGTAGGGTGTGCTTTTTAATATAAGTCCTGGACAAGGAGAACAACTAATCTTGGGGATTGGTAGTCACAATTCTCTGGTTTTATGTCAACGTGTGGTTGTAGAGAATGAGGTTGGTATAATTGGAGATGTGTTTGGATACTCATCAAAATGAGTGTGTACCTTAGGAACTAAGAACCAAGGACACTGACACGGGAAATGGGATACGACACAGCACAGCAATACGCCAATTATTTTAAAATGTAGGTCACGACACGGCGAGTACACATTATTTTTTATTTTATTTTTATTCTATATATATGCATATTCAGTTTTTCTATTAATTATTAAAAATAATATTTCTTTTAAAAGTAATATATAATAAAGAAGAAGGAAAAGACATTTAAAAGAAAAAAGTCCAAAACCTATTTTAAAAAGACCCAACGTGAAAAAATGTCAAGGCACAAAAGCCCATTTAAAGGTAAAAACCCTAACCCTAATGATGTTTCCTTCCCACCACCATTCTCTTTAACATCCACACGTTAGGTTCTGCTTAGTGCTTTCCCCCTTCCTCCTAGATTCTTCTCAATGACGCCAACCTCATCCTTTGTCATCGTTCAGCTGGACAACCCCGACTTTTCCTCCCTTCACCATCGCTTAGTCGGGTAAAAAAAACGGGCACGTTAAATTTTTTAATAGAAAGTTACAGCTTCTCGTGTCCTGAGGTGTCATCTGCATGTCTGGCCATGTCGAGAAGTTTCCTGCCTTGTTCGATATTACAAATTTAG ATGGCTTATCAGCATGGTCCGGGTCCTAGTTCCATATCTGGATCAAGTTCGAGTTCTGGGTTCCTGAACTCTCCTTTTGGTGATACCACTTACACCAAGGTCTTTGTTGGTGGGTTGGCCTGGGAGACTCAGAGCGAAACTATGAGGCGCTACTTTGAGCAGTTTGGGAGATTCTTGAGGCTGTTAAGAGCTTGTGCAGACCCTACCCCAATTATTGATGGCAGGCGAGCAAATTGTAATCTAGCTTCACTTGGTCGGCCTCGTCCACCTATATCTTTTGGAACAGGACGTTTAAGACAGCCTGCAGTTTATGTTGGAGGCATGCAACCTAACAGGGGAACTTATATTGGAAATTTTGGCTATCAACAACCGGTTTCCTATGCTTATCAGCAGGGACTTGCATATCCTCCTTATGGTTATGCTACTTATGGACCTGAGTATGTCTACCCGCAGGGTGGATACAACCCTTTCGTGGGTCAGCAATACCTGCAGATTTATGGAGTGCCTGGGTCAGCAAGCCCTACAATTTATCATTATGGACAATTAGGTCAAACAGTCCCCGGTGGTCATGGTTATGGAGCAGTACATGGATACGCGATGCCAAGTCCTCAGATTTTGCAGTTTAGTGGTCCTAATGTTAATGCTTTAACATCTTCTCCAATGCCTACTATTCAGGCACCATATCCTTCAGGGATTCCAGCACCTGTTGCAGCACAGCCACAGTTCGTTGTTCATTCTCCTTCTCAGTTCGTACAAGGTAGCGGTTCTGACCAAACATCTGGTTACAGCTTCTCGTGTCCTGAGGTGTCATCTGCATGTCTGGCCATGTCGAGAAGTTTCCTGCCTTGTTCGATATTACAAATTTAG ATGGCTTATCAGCATGGTCCGGGTCCTAGTTCCATATCTGGATCAAGTTCGAGTTCTGGGTTCCTGAACTCTCCTTTTGGTGATACCACTTACACCAAGGTCTTTGTTGGTGGGTTGGCCTGGGAGACTCAGAGCGAAACTATGAGGCGCTACTTTGAGCAGTTTGGGAGATTCTTGAGGCTGTTAAGAGCTTGTGCAGACCCTACCCCAATTATTGATGGCAGGCGAGCAAATTGTAATCTAGCTTCACTTGGTCGGCCTCGTCCACCTATATCTTTTGGAACAGGACGTTTAAGACAGCCTGCAGTTTATGTTGGAGGCATGCAACCTAACAGGGGAACTTATATTGGAAATTTTGGCTATCAACAACCGGTTTCCTATGCTTATCAGCAGGGACTTGCATATCCTCCTTATGGTTATGCTACTTATGGACCTGAGTATGTCTACCCGCAGGGTGGATACAACCCTTTCGTGGGTCAGCAATACCTGCAGATTTATGGAGTGCCTGGGTCAGCAAGCCCTACAATTTATCATTATGGACAATTAGGTCAAACAGTCCCCGGTGGTCATGGTTATGGAGCAGTACATGGATACGCGATGCCAAGTCCTCAGATTTTGCAGTTTAGTGGTCCTAATGTTAATGCTTTAACATCTTCTCCAATGCCTACTATTCAGGCACCATATCCTTCAGGGATTCCAGCACCTGTTGCAGCACAGCCACAGTTCGTTGTTCATTCTCCTTCTCAGTTCGTACAAGGTAGCGGTTCTGACCAAACATCTGGTTACAGCTTCTCGTGTCCTGAGGTGTCATCTGCATGTCTGGCCATGTCGAGAAGTTTCCTGCCTTGTTCGATATTACAAATTTAG MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGRFLRLLRACADPTPIIDGRRANCNLASLGRPRPPISFGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSGYSFSCPEVSSACLAMSRSFLPCSILQI Homology
BLAST of IVF0023375 vs. ExPASy Swiss-Prot
Match: Q9M1S3 (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.0e-14 Identity = 74/213 (34.74%), Postives = 92/213 (43.19%), Query Frame = 0
BLAST of IVF0023375 vs. ExPASy Swiss-Prot
Match: Q6GQD3 (RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.8e-13 Identity = 65/217 (29.95%), Postives = 80/217 (36.87%), Query Frame = 0
BLAST of IVF0023375 vs. ExPASy Swiss-Prot
Match: Q9BX46 (RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.5e-12 Identity = 67/222 (30.18%), Postives = 84/222 (37.84%), Query Frame = 0
BLAST of IVF0023375 vs. ExPASy Swiss-Prot
Match: D3Z4I3 (RNA-binding protein 24 OS=Mus musculus OX=10090 GN=Rbm24 PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.2e-12 Identity = 67/222 (30.18%), Postives = 85/222 (38.29%), Query Frame = 0
BLAST of IVF0023375 vs. ExPASy Swiss-Prot
Match: Q76LC6 (RNA-binding protein 24 OS=Danio rerio OX=7955 GN=rbm24 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 7.2e-12 Identity = 64/208 (30.77%), Postives = 81/208 (38.94%), Query Frame = 0
BLAST of IVF0023375 vs. ExPASy TrEMBL
Match: A0A5D3CHF9 (RNA-binding protein 24-A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00070 PE=4 SV=1) HSP 1 Score: 512.7 bits (1319), Expect = 1.0e-141 Identity = 256/286 (89.51%), Postives = 257/286 (89.86%), Query Frame = 0
BLAST of IVF0023375 vs. ExPASy TrEMBL
Match: A0A1S3CME8 (RNA-binding protein 24-A OS=Cucumis melo OX=3656 GN=LOC103502602 PE=4 SV=1) HSP 1 Score: 512.7 bits (1319), Expect = 1.0e-141 Identity = 256/286 (89.51%), Postives = 257/286 (89.86%), Query Frame = 0
BLAST of IVF0023375 vs. ExPASy TrEMBL
Match: A0A0A0KHA9 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G401470 PE=4 SV=1) HSP 1 Score: 493.8 bits (1270), Expect = 4.8e-136 Identity = 245/277 (88.45%), Postives = 248/277 (89.53%), Query Frame = 0
BLAST of IVF0023375 vs. ExPASy TrEMBL
Match: A0A6J1G3W1 (RNA-binding protein 24-A OS=Cucurbita moschata OX=3662 GN=LOC111450546 PE=4 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 5.0e-133 Identity = 243/286 (84.97%), Postives = 247/286 (86.36%), Query Frame = 0
BLAST of IVF0023375 vs. ExPASy TrEMBL
Match: A0A6J1KGG8 (RNA-binding protein 24-A OS=Cucurbita maxima OX=3661 GN=LOC111494003 PE=4 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 3.2e-132 Identity = 241/286 (84.27%), Postives = 245/286 (85.66%), Query Frame = 0
BLAST of IVF0023375 vs. NCBI nr
Match: XP_008464801.1 (PREDICTED: RNA-binding protein 24-A [Cucumis melo]) HSP 1 Score: 510 bits (1313), Expect = 3.69e-181 Identity = 256/286 (89.51%), Postives = 257/286 (89.86%), Query Frame = 0
BLAST of IVF0023375 vs. NCBI nr
Match: XP_004146763.1 (RNA-binding protein 24-A [Cucumis sativus] >KGN48031.2 hypothetical protein Csa_003949 [Cucumis sativus]) HSP 1 Score: 508 bits (1308), Expect = 2.13e-180 Identity = 254/286 (88.81%), Postives = 257/286 (89.86%), Query Frame = 0
BLAST of IVF0023375 vs. NCBI nr
Match: KAA0045404.1 (RNA-binding protein 24-A [Cucumis melo var. makuwa] >TYK11333.1 RNA-binding protein 24-A [Cucumis melo var. makuwa]) HSP 1 Score: 510 bits (1313), Expect = 5.70e-179 Identity = 256/286 (89.51%), Postives = 257/286 (89.86%), Query Frame = 0
BLAST of IVF0023375 vs. NCBI nr
Match: XP_022946505.1 (RNA-binding protein 24-A [Cucurbita moschata] >XP_022946506.1 RNA-binding protein 24-A [Cucurbita moschata]) HSP 1 Score: 481 bits (1239), Expect = 6.46e-170 Identity = 243/286 (84.97%), Postives = 247/286 (86.36%), Query Frame = 0
BLAST of IVF0023375 vs. NCBI nr
Match: XP_022999744.1 (RNA-binding protein 24-A [Cucurbita maxima] >XP_022999745.1 RNA-binding protein 24-A [Cucurbita maxima]) HSP 1 Score: 479 bits (1232), Expect = 7.53e-169 Identity = 241/286 (84.27%), Postives = 245/286 (85.66%), Query Frame = 0
BLAST of IVF0023375 vs. TAIR 10
Match: AT1G76460.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 310.8 bits (795), Expect = 1.1e-84 Identity = 163/295 (55.25%), Postives = 198/295 (67.12%), Query Frame = 0
BLAST of IVF0023375 vs. TAIR 10
Match: AT1G20880.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 256.9 bits (655), Expect = 1.9e-68 Identity = 144/281 (51.25%), Postives = 178/281 (63.35%), Query Frame = 0
BLAST of IVF0023375 vs. TAIR 10
Match: AT1G20880.2 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 256.9 bits (655), Expect = 1.9e-68 Identity = 144/281 (51.25%), Postives = 178/281 (63.35%), Query Frame = 0
BLAST of IVF0023375 vs. TAIR 10
Match: AT1G22330.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 132.1 bits (331), Expect = 7.1e-31 Identity = 103/278 (37.05%), Postives = 136/278 (48.92%), Query Frame = 0
BLAST of IVF0023375 vs. TAIR 10
Match: AT1G78260.2 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 126.7 bits (317), Expect = 3.0e-29 Identity = 100/252 (39.68%), Postives = 121/252 (48.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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