IVF0023364 (gene) Melon (IVF77) v1

Overview


Name	IVF0023364
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Dynein light chain
Location	chr05: 25629001 .. 25630683 (+)
RNA-Seq Expression	IVF0023364
Synteny	IVF0023364

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACTCTAAACAAGCAAATGAAAGGATTCAAATCCTTCTACAAGTCTCGGGACGGAGGAGGTCGTAATGTATCGTCACGCGAGCCTGTTTCTACGAGTTCAGTGGATAAGACATCAATTTATAAGTATAACTGGTTGGGTAGAAAATCCAAGAAAGCAACTGATCAACACAGCGGTGGCGGTGGTGCCGGGGGCATCGGAGAGGAGATAATGGGAGGAAGAAAAGTGGTGGTTGAAGGTAGGAAATCAGTTTCTCATGTGGAAACAATTTGGGATCAGTAGCCTCCTTTCTTCAAGTGAAGGTATTGGTGTCAGATATGCCTGAAATTATGCAAATTCAAGCTTTTAGAACTGCAAGGAGAAGTTATGATAGTTTGGAGAAGTTTAGCTCAAAACATATGGCTTACAATATTAAAAGGTATTTATATATTTATCAGCTATACTGTTCACATTGGCAAGTTTTGTTTAGTGGTTAGTTTTTCGTACAACTTCTCTCTTTCAACGTATCATTGCTTTTTCTTTTCGATCTTAGTTGTTATGAAATCGACAAATAAAAGAACGAGAAAACACAATATAAGGAACAATGTGTTAGTTATGTCTACAAAATGGATTGTAGAGAGAGTTCAGTGGGATTAGAGGGTTTACTGTATGTATGCAGTGAATCCCTTTAAACTCTAATGTCAAATTTACATATATTGATGGGATTTGATCATTTTAAAGTAAAACTAGTTTTTTGGCCTTTTTGGGCATTGGGAATTTCATATTGGATTTGGTCTTTTTGTGAGGAAATGTTGAAAGAAAAGGGCAGGCAGGAGCTCCTTTTAATTTGTTGCTTTCTTGATTTCCTTCTTTTGGTCATACTCAGAAAGAAAATCTAACAAAGTGAAACTGTCTTTTGTTCGAGTACGGACATTCAAACCTTCGACTTTAAGAAAGAAATAATAAATGACAATTACTGTTTGAGTTAGGTTCAGGTTTGCTCTCTAAACTCTATTTGTTGTTCACTTACTTCCATCACTAAATCTGTGTATTAATTGTATAATCAGAAACTAAGTCTTTTGAGAGAGAATTCAAGTGGGCATTTGGTCAAAGGATCCGACAGCCCATGTGTGTTAGATCAGTGATTAGCACATATTTTAAAGCTAATAATCTCATATATTTTCATTGAAATTGAAGCTCTTTTTTCTTATCCATGTGCATTTCTTGATACTTTACTCTTCCTAATTTCTCTTGCAATCATTTCGAAAGAATCTCACTCGTTACTAAATTATTGTAAACTGAGATTGGTTACGAGTCTTGAATCAAGAAACGGTAACAAGAATGGTATTAAGTGACAAAGTTCAAAGGTGTTTTTCTTTCATAATTTAGCTGACTCAAAACACCATAAAATTAGATGATAAGAATAACTTTTAGAACAAATATTTGGTTTGACACACTACATTGATTCATAATAACTTTTAGAACAAATATTTGGTTTGACACACTACATTGATTCATACTGATTAAATTGGGGATTAATGGCAGGAATTTGATAAAGTATATGGGCCAGCTTGGCATTGTATTGTGGGGTCAAGTTTTGGGTCATTTGTGACCCACTCAACAGGTTGTTTCCTTTATTTTTCAATGGAGAAATTGTACATTTTGTTGTTTAGAACTAAGATTCAGAAAGCTATTGAATGA

mRNA sequence

ATGGCCACTCTAAACAAGCAAATGAAAGGATTCAAATCCTTCTACAAGTCTCGGGACGGAGGAGGTCGTAATGTATCGTCACGCGAGCCTGTTTCTACGAGTTCAGTGGATAAGACATCAATTTATAAGTATAACTGGTTGGGTAGAAAATCCAAGAAAGCAACTGATCAACACAGCGGTGGCGGTGGTGCCGGGGGCATCGGAGAGGAGATAATGGGAGGAAGAAAAGTGGTGGTTGAAGGTAGGAAATCAGTTTCTCATGTATTGGTGTCAGATATGCCTGAAATTATGCAAATTCAAGCTTTTAGAACTGCAAGGAGAAGTTATGATAGTTTGGAGAAGTTTAGCTCAAAACATATGGCTTACAATATTAAAAGGTATTTATATATTTATCAGCTATACTGTTCACATTGGCAAGAATTTGATAAAGTATATGGGCCAGCTTGGCATTGTATTGTGGGGTCAAGTTTTGGGTCATTTGTGACCCACTCAACAGGTTGTTTCCTTTATTTTTCAATGGAGAAATTGTACATTTTGTTGTTTAGAACTAAGATTCAGAAAGCTATTGAATGA

Coding sequence (CDS)

ATGGCCACTCTAAACAAGCAAATGAAAGGATTCAAATCCTTCTACAAGTCTCGGGACGGAGGAGGTCGTAATGTATCGTCACGCGAGCCTGTTTCTACGAGTTCAGTGGATAAGACATCAATTTATAAGTATAACTGGTTGGGTAGAAAATCCAAGAAAGCAACTGATCAACACAGCGGTGGCGGTGGTGCCGGGGGCATCGGAGAGGAGATAATGGGAGGAAGAAAAGTGGTGGTTGAAGGTAGGAAATCAGTTTCTCATGTATTGGTGTCAGATATGCCTGAAATTATGCAAATTCAAGCTTTTAGAACTGCAAGGAGAAGTTATGATAGTTTGGAGAAGTTTAGCTCAAAACATATGGCTTACAATATTAAAAGGTATTTATATATTTATCAGCTATACTGTTCACATTGGCAAGAATTTGATAAAGTATATGGGCCAGCTTGGCATTGTATTGTGGGGTCAAGTTTTGGGTCATTTGTGACCCACTCAACAGGTTGTTTCCTTTATTTTTCAATGGAGAAATTGTACATTTTGTTGTTTAGAACTAAGATTCAGAAAGCTATTGAATGA

Protein sequence

MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSGGGGAGGIGEEIMGGRKVVVEGRKSVSHVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSHWQEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRTKIQKAIE

Homology

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BLAST of IVF0023364 vs. ExPASy Swiss-Prot
Match: Q86A88 (Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.2e-11
Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 79  VEGRKSVSHVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSHW 138
           +   K + +V  +DMP+ MQ  A     ++++  E    + +A  IK+            
Sbjct: 1   MSSNKYIINVKNADMPDFMQQDATECTIKAFE--ETNIERDIAMIIKK------------ 60

Query: 139 QEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFR 183
            EFDK Y P WHCIVG SFGSFVTH T  F+YF++ K  +LLF+
Sbjct: 61  -EFDKKYSPTWHCIVGKSFGSFVTHETKNFIYFNINKHSVLLFK 89

[Close]

BLAST of IVF0023364 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-10
Identity = 45/113 (39.82%), Postives = 62/113 (54.87%), Query Frame = 0


Query: 72  MGGRKVVVEGRKSVSHVLVSDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKRYLYI 131
           M  RK V++          +DMPE MQ  A   A +   +LEKF+  K +A  IK+    
Sbjct: 1   MSERKAVIKN---------ADMPEDMQQDAVDCATQ---ALEKFNIEKDIAAYIKK---- 60

Query: 132 YQLYCSHWQEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRT 184
                    EFDK Y P WHCIVG +FGS+VTH T  F+YF + ++ +LLF++
Sbjct: 61  ---------EFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKS 88

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BLAST of IVF0023364 vs. ExPASy Swiss-Prot
Match: Q94748 (Probable dynein light chain OS=Schistosoma mansoni OX=6183 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 9.9e-10
Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 0


Query: 72  MGGRKVVVEGRKSVSHVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKRYLYIY 131
           MG RK V++          +DM E MQ  A  TA  + D  E    K +A  IK+     
Sbjct: 1   MGERKAVIKN---------ADMHEDMQETAVHTAAAALDKYE--IEKDVAAYIKK----- 60

Query: 132 QLYCSHWQEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRT 184
                   EFD+ Y P WHCIVG  FGS+VTH T  F+YF +++   LLF++
Sbjct: 61  --------EFDRKYNPNWHCIVGKHFGSYVTHETQHFIYFYLQERAFLLFKS 88

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BLAST of IVF0023364 vs. ExPASy Swiss-Prot
Match: P61285 (Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-09
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 91  SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKRYLYIYQLYCSHWQEFDKVYGPAW 150
           +DM E MQ  +   A +   +LEK++  K +A +IK+             EFDK Y P W
Sbjct: 11  ADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKK-------------EFDKKYNPTW 70

Query: 151 HCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRT 184
           HCIVG +FGS+VTH T  F+YF + ++ ILLF++
Sbjct: 71  HCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of IVF0023364 vs. ExPASy Swiss-Prot
Match: P63167 (Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-09
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 91  SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKRYLYIYQLYCSHWQEFDKVYGPAW 150
           +DM E MQ  +   A +   +LEK++  K +A +IK+             EFDK Y P W
Sbjct: 11  ADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKK-------------EFDKKYNPTW 70

Query: 151 HCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRT 184
           HCIVG +FGS+VTH T  F+YF + ++ ILLF++
Sbjct: 71  HCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of IVF0023364 vs. ExPASy TrEMBL
Match: A0A1S3C671 (uncharacterized protein LOC103497357 OS=Cucumis melo OX=3656 GN=LOC103497357 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.7e-87
Identity = 176/205 (85.85%), Postives = 177/205 (86.34%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG
Sbjct: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSH---------------VLVSDMPEIMQIQAFRTA 120
           GGGAGGIGEEIMGGRKVVVEGRKSVSH               VLVSDMPEIMQIQAFRTA
Sbjct: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSHWQEFDKVYGPAWHCIVGSSFGSFVTHST 180
           RRSYDSLEKFSSKHMAYNIK+             EFDKVYGPAWHCIVGSSFGSFVTHST
Sbjct: 121 RRSYDSLEKFSSKHMAYNIKK-------------EFDKVYGPAWHCIVGSSFGSFVTHST 180

Query: 181 GCFLYFSMEKLYILLFRTKIQKAIE 191
           GCFLYFSMEKLYILLFRTKIQKAIE
Sbjct: 181 GCFLYFSMEKLYILLFRTKIQKAIE 192

[Close]

BLAST of IVF0023364 vs. ExPASy TrEMBL
Match: A0A0A0LKY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006120 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.2e-81
Identity = 169/208 (81.25%), Postives = 173/208 (83.17%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MATLNKQMKGFKSFYKSRD GGRNVSSREP+S SSVDKTSIYKYNWLGRKSKKAT+QH G
Sbjct: 1   MATLNKQMKGFKSFYKSRD-GGRNVSSREPISMSSVDKTSIYKYNWLGRKSKKATEQHGG 60

Query: 61  GGGAGGIG---EEIMGGRKVVVEGRKSVSH---------------VLVSDMPEIMQIQAF 120
           GGG GG+G   EEIMGGRKVVVEGRKSVSH               VLVSDMPEIMQIQAF
Sbjct: 61  GGGGGGVGGIREEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAF 120

Query: 121 RTARRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSHWQEFDKVYGPAWHCIVGSSFGSFVT 180
           RTARRSYDSLEKFSSKHMAYNIK+             EFDKVYGPAWHCIVGSSFGSFVT
Sbjct: 121 RTARRSYDSLEKFSSKHMAYNIKK-------------EFDKVYGPAWHCIVGSSFGSFVT 180

Query: 181 HSTGCFLYFSMEKLYILLFRTKIQKAIE 191
           HSTGCFLYFSMEKLYILLFRTKIQKAIE
Sbjct: 181 HSTGCFLYFSMEKLYILLFRTKIQKAIE 194

[Close]

BLAST of IVF0023364 vs. ExPASy TrEMBL
Match: A0A6J1G363 (uncharacterized protein LOC111450366 OS=Cucurbita moschata OX=3662 GN=LOC111450366 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.6e-66
Identity = 144/205 (70.24%), Postives = 155/205 (75.61%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MA+LNKQMKGFKSFYKSRDG   NV +R  VS SSVDKTS+YKYNWL  KSKK +DQ+ G
Sbjct: 1   MASLNKQMKGFKSFYKSRDGAHHNVPARNLVSMSSVDKTSVYKYNWLNGKSKKTSDQNGG 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSH---------------VLVSDMPEIMQIQAFRTA 120
           GGG         GGRKVVVEGRKSVS                VLVSDMPE+MQ++AFRTA
Sbjct: 61  GGGC--------GGRKVVVEGRKSVSQVETNLASVAAFLQVKVLVSDMPEMMQVEAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSHWQEFDKVYGPAWHCIVGSSFGSFVTHST 180
           RRSYDSLEKFSSK+MAYNIK+             EFDKV+GPAWHCIVGSSFGSFVTHST
Sbjct: 121 RRSYDSLEKFSSKYMAYNIKK-------------EFDKVHGPAWHCIVGSSFGSFVTHST 180

Query: 181 GCFLYFSMEKLYILLFRTKIQKAIE 191
           GCFLYFSMEKLYILLFRTKIQKA E
Sbjct: 181 GCFLYFSMEKLYILLFRTKIQKANE 184

[Close]

BLAST of IVF0023364 vs. ExPASy TrEMBL
Match: A0A6J1CN34 (uncharacterized protein LOC111013113 OS=Momordica charantia OX=3673 GN=LOC111013113 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.5e-64
Identity = 144/211 (68.25%), Postives = 161/211 (76.30%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MATLNKQ+KGFKSFYKSRD G R+ ++ +P   + +D+  +YKYNWLGRKSKKATDQH G
Sbjct: 1   MATLNKQIKGFKSFYKSRD-GARDTAAFDP---APLDRVPVYKYNWLGRKSKKATDQHGG 60

Query: 61  -----GGGAGGIGEEIMGGRK-VVVEGRKSVSH---------------VLVSDMPEIMQI 120
                GGG GG G E MGGRK +VVEGRKSVSH               VLVSDMPE+MQ+
Sbjct: 61  RRGMEGGGGGGDGGEGMGGRKLLVVEGRKSVSHVETNLASVAAFLQVKVLVSDMPEMMQL 120

Query: 121 QAFRTARRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSHWQEFDKVYGPAWHCIVGSSFGS 180
           QAFR+ARRSYDSLEKFSSKHMA++IK+             EFDKV+GPAWHCIVGSSFGS
Sbjct: 121 QAFRSARRSYDSLEKFSSKHMAHSIKK-------------EFDKVHGPAWHCIVGSSFGS 180

Query: 181 FVTHSTGCFLYFSMEKLYILLFRTKIQKAIE 191
           FVTHSTGCFLYFSMEKLYILLFRTKIQKA E
Sbjct: 181 FVTHSTGCFLYFSMEKLYILLFRTKIQKATE 194

[Close]

BLAST of IVF0023364 vs. ExPASy TrEMBL
Match: A0A6J1KGV2 (uncharacterized protein LOC111493764 OS=Cucurbita maxima OX=3661 GN=LOC111493764 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 7.2e-64
Identity = 140/205 (68.29%), Postives = 152/205 (74.15%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MA+LNKQMKGFKSFYKSRD    NV +R  +S SSVDKTS+YKYNWL  KSKK +DQ+  
Sbjct: 1   MASLNKQMKGFKSFYKSRDEAHHNVPARNSISMSSVDKTSVYKYNWLNGKSKKDSDQN-- 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSH---------------VLVSDMPEIMQIQAFRTA 120
                  GE   GGRKVVVEGRKSVS                VLVSDMPE+MQ++AFRTA
Sbjct: 61  ------CGEVECGGRKVVVEGRKSVSQVETNLASLATFLQVKVLVSDMPEMMQVEAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSHWQEFDKVYGPAWHCIVGSSFGSFVTHST 180
           RRSYDSLEKFSSK+MAYNIK+             EFDKV+GPAWHCIVGSSFGSFVTHST
Sbjct: 121 RRSYDSLEKFSSKYMAYNIKK-------------EFDKVHGPAWHCIVGSSFGSFVTHST 180

Query: 181 GCFLYFSMEKLYILLFRTKIQKAIE 191
           GCFLYFSMEKLYILLFRTKIQKA E
Sbjct: 181 GCFLYFSMEKLYILLFRTKIQKANE 184

[Close]

BLAST of IVF0023364 vs. NCBI nr
Match: XP_008457739.1 (PREDICTED: uncharacterized protein LOC103497357 [Cucumis melo])

HSP 1 Score: 330 bits (845), Expect = 5.14e-113
Identity = 176/205 (85.85%), Postives = 177/205 (86.34%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG
Sbjct: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHV---------------LVSDMPEIMQIQAFRTA 120
           GGGAGGIGEEIMGGRKVVVEGRKSVSHV               LVSDMPEIMQIQAFRTA
Sbjct: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSHWQEFDKVYGPAWHCIVGSSFGSFVTHST 180
           RRSYDSLEKFSSKHMAYNIK+             EFDKVYGPAWHCIVGSSFGSFVTHST
Sbjct: 121 RRSYDSLEKFSSKHMAYNIKK-------------EFDKVYGPAWHCIVGSSFGSFVTHST 180

Query: 181 GCFLYFSMEKLYILLFRTKIQKAIE 190
           GCFLYFSMEKLYILLFRTKIQKAIE
Sbjct: 181 GCFLYFSMEKLYILLFRTKIQKAIE 192

[Close]

BLAST of IVF0023364 vs. NCBI nr
Match: XP_031736570.1 (uncharacterized protein LOC101208065 [Cucumis sativus] >KAE8651528.1 hypothetical protein Csa_019270 [Cucumis sativus])

HSP 1 Score: 305 bits (782), Expect = 2.52e-103
Identity = 169/212 (79.72%), Postives = 172/212 (81.13%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MATLNKQMKGFKSFYKSRDGG RNVSSREP+S SSVDKTSIYKYNWLGRKSKKAT+QH G
Sbjct: 1   MATLNKQMKGFKSFYKSRDGG-RNVSSREPISMSSVDKTSIYKYNWLGRKSKKATEQHGG 60

Query: 61  GGGAGGIG-------EEIMGGRKVVVEGRKSVSHV---------------LVSDMPEIMQ 120
           GGG GG G       EEIMGGRKVVVEGRKSVSHV               LVSDMPEIMQ
Sbjct: 61  GGGGGGGGGGVGGIREEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQ 120

Query: 121 IQAFRTARRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSHWQEFDKVYGPAWHCIVGSSFG 180
           IQAFRTARRSYDSLEKFSSKHMAYNIK+             EFDKVYGPAWHCIVGSSFG
Sbjct: 121 IQAFRTARRSYDSLEKFSSKHMAYNIKK-------------EFDKVYGPAWHCIVGSSFG 180

Query: 181 SFVTHSTGCFLYFSMEKLYILLFRTKIQKAIE 190
           SFVTHSTGCFLYFSMEKLYILLFRTKIQKAIE
Sbjct: 181 SFVTHSTGCFLYFSMEKLYILLFRTKIQKAIE 198

[Close]

BLAST of IVF0023364 vs. NCBI nr
Match: XP_038890919.1 (uncharacterized protein LOC120080348 [Benincasa hispida])

HSP 1 Score: 291 bits (744), Expect = 9.88e-98
Identity = 160/205 (78.05%), Postives = 165/205 (80.49%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           M TLNKQMKGFKSFYKSRDGG RNV +REPVSTSS+DKTSIYKYNWLGRK+KKATDQH  
Sbjct: 1   MTTLNKQMKGFKSFYKSRDGG-RNVPTREPVSTSSMDKTSIYKYNWLGRKTKKATDQHGR 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHV---------------LVSDMPEIMQIQAFRTA 120
           GG      EEIMGGRKVVVEGRKSVSHV               LVSDMPEIMQIQAFRTA
Sbjct: 61  GG------EEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSHWQEFDKVYGPAWHCIVGSSFGSFVTHST 180
           RRSYDSLEKFSSKHMAYNIK+             EFDKV+GPAWHCIVGSSFGSFVTHST
Sbjct: 121 RRSYDSLEKFSSKHMAYNIKK-------------EFDKVHGPAWHCIVGSSFGSFVTHST 180

Query: 181 GCFLYFSMEKLYILLFRTKIQKAIE 190
           GCFLYFSMEKLYILLFRTKIQKA E
Sbjct: 181 GCFLYFSMEKLYILLFRTKIQKATE 185

[Close]

BLAST of IVF0023364 vs. NCBI nr
Match: KAG7030397.1 (hypothetical protein SDJN02_08744, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266 bits (680), Expect = 5.70e-88
Identity = 146/205 (71.22%), Postives = 157/205 (76.59%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MA+LNKQMKGFKSFYKSRDG   NV +R PVS SSVDKTS+YKYNWL  KSKKA+DQ+ G
Sbjct: 1   MASLNKQMKGFKSFYKSRDGAHHNVPARNPVSMSSVDKTSVYKYNWLNGKSKKASDQNGG 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHV---------------LVSDMPEIMQIQAFRTA 120
           GGG G       GGR VVVEGRKSVS V               LVSDMPE+MQ++AFRTA
Sbjct: 61  GGGCG------CGGRTVVVEGRKSVSQVETNLASVAAFLQVKVLVSDMPEMMQVEAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSHWQEFDKVYGPAWHCIVGSSFGSFVTHST 180
           RRSYDSLEKFSSK+MAYNIK+             EFDKV+GPAWHCIVGSSFGSFVTHST
Sbjct: 121 RRSYDSLEKFSSKYMAYNIKK-------------EFDKVHGPAWHCIVGSSFGSFVTHST 180

Query: 181 GCFLYFSMEKLYILLFRTKIQKAIE 190
           GCFLYFSMEKLYILLFRTKIQKA E
Sbjct: 181 GCFLYFSMEKLYILLFRTKIQKANE 186

[Close]

BLAST of IVF0023364 vs. NCBI nr
Match: XP_022946213.1 (uncharacterized protein LOC111450366 [Cucurbita moschata])

HSP 1 Score: 261 bits (666), Expect = 7.20e-86
Identity = 144/205 (70.24%), Postives = 155/205 (75.61%), Query Frame = 0


Query: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60
           MA+LNKQMKGFKSFYKSRDG   NV +R  VS SSVDKTS+YKYNWL  KSKK +DQ+ G
Sbjct: 1   MASLNKQMKGFKSFYKSRDGAHHNVPARNLVSMSSVDKTSVYKYNWLNGKSKKTSDQNGG 60

Query: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHV---------------LVSDMPEIMQIQAFRTA 120
           GGG         GGRKVVVEGRKSVS V               LVSDMPE+MQ++AFRTA
Sbjct: 61  GGGC--------GGRKVVVEGRKSVSQVETNLASVAAFLQVKVLVSDMPEMMQVEAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSHWQEFDKVYGPAWHCIVGSSFGSFVTHST 180
           RRSYDSLEKFSSK+MAYNIK+             EFDKV+GPAWHCIVGSSFGSFVTHST
Sbjct: 121 RRSYDSLEKFSSKYMAYNIKK-------------EFDKVHGPAWHCIVGSSFGSFVTHST 180

Query: 181 GCFLYFSMEKLYILLFRTKIQKAIE 190
           GCFLYFSMEKLYILLFRTKIQKA E
Sbjct: 181 GCFLYFSMEKLYILLFRTKIQKANE 184

[Close]

BLAST of IVF0023364 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 141.4 bits (355), Expect = 7.7e-34
Identity = 75/128 (58.59%), Postives = 86/128 (67.19%), Query Frame = 0


Query: 80  EGRKSVSHV-------------------LVSDMPEIMQIQAFRTARRSYDSLEKFSSKHM 139
           EGRKSVSHV                   L +DMP  MQ  AFR AR + DSLEKFSSKHM
Sbjct: 92  EGRKSVSHVERDTAARIEAAAEMLTVRILAADMPGFMQAHAFRCARMTLDSLEKFSSKHM 151

Query: 140 AYNIKRYLYIYQLYCSHWQEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILL 189
           A+N+K+             EFDK YGPAWHCIVGSSFGSFVTHSTGCF+YFSM+KLY+LL
Sbjct: 152 AFNLKK-------------EFDKGYGPAWHCIVGSSFGSFVTHSTGCFIYFSMDKLYVLL 206

[Close]

BLAST of IVF0023364 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 86.7 bits (213), Expect = 2.3e-17
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 88  VLVSDMPEIMQIQAFRTARRSYDSLE-KFSSKHMAYNIKRYLYIYQLYCSHWQEFDKVYG 147
           V  SDMP   Q +AF  +R   ++   K  +K +A+ +K+             +FD  YG
Sbjct: 38  VRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALKK-------------DFDSAYG 97

Query: 148 PAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRTKIQ 187
           PAWHCIVG+SFGS+VTHSTG FLYF ++K+Y+LLF+T ++
Sbjct: 98  PAWHCIVGTSFGSYVTHSTGGFLYFQIDKVYVLLFKTAVE 124

[Close]

BLAST of IVF0023364 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-13
Identity = 42/105 (40.00%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 78  VVEGRKSVSHVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSH 137
           ++EG+  V     SDMP  MQ+QA   A ++ D  + F  K +A +IK+           
Sbjct: 1   MLEGKAMVED---SDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKK----------- 60

Query: 138 WQEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFR 183
             EFD+ YG  W C+VGS+FG F THS G F+YF +E L  L+F+
Sbjct: 61  --EFDERYGSGWQCVVGSNFGCFFTHSKGTFIYFQLETLKFLIFK 89

[Close]

BLAST of IVF0023364 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 71.6 bits (174), Expect = 7.5e-13
Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 78  VVEGRKSVSHVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSH 137
           ++EG+  V     +DMP  MQ+QA + A +S D  + F S  +A +IK+           
Sbjct: 1   MLEGKAKVEE---TDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKK----------- 60

Query: 138 WQEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFR 183
             EFD+ YG  W C+VG++FG F THS G F+YF +  L  L+F+
Sbjct: 61  --EFDERYGSGWQCVVGTNFGCFFTHSKGTFIYFHLGTLNFLIFK 89

[Close]

BLAST of IVF0023364 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-11
Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = 0


Query: 91  SDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKRYLYIYQLYCSHWQEFDKVYGPAWH 150
           +DM + M+  A   A ++ D  +      +A  IK+             EFD+ YG  W 
Sbjct: 11  TDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKK-------------EFDRSYGSGWQ 70

Query: 151 CIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRTKI 186
           CIVG+ FGSFVTH +GCF++FS+  L ILLF+  +
Sbjct: 71  CIVGTHFGSFVTHCSGCFIHFSVGSLTILLFKGSV 92

The following BLAST results are available for this feature:

BLAST of IVF0023364 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q86A88	5.2e-11	38.46	Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=...	[more]
O02414	2.0e-10	39.82	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
Q94748	9.9e-10	38.39	Probable dynein light chain OS=Schistosoma mansoni OX=6183 PE=3 SV=1	[more]
P61285	1.3e-09	41.49	Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1	[more]
P63167	1.3e-09	41.49	Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1	[more]

BLAST of IVF0023364 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C671	2.7e-87	85.85	uncharacterized protein LOC103497357 OS=Cucumis melo OX=3656 GN=LOC103497357 PE=...	[more]
A0A0A0LKY0	2.2e-81	81.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006120 PE=4 SV=1	[more]
A0A6J1G363	1.6e-66	70.24	uncharacterized protein LOC111450366 OS=Cucurbita moschata OX=3662 GN=LOC1114503...	[more]
A0A6J1CN34	1.5e-64	68.25	uncharacterized protein LOC111013113 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1KGV2	7.2e-64	68.29	uncharacterized protein LOC111493764 OS=Cucurbita maxima OX=3661 GN=LOC111493764...	[more]

BLAST of IVF0023364 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457739.1	5.14e-113	85.85	PREDICTED: uncharacterized protein LOC103497357 [Cucumis melo]	[more]
XP_031736570.1	2.52e-103	79.72	uncharacterized protein LOC101208065 [Cucumis sativus] >KAE8651528.1 hypothetica...	[more]
XP_038890919.1	9.88e-98	78.05	uncharacterized protein LOC120080348 [Benincasa hispida]	[more]
KAG7030397.1	5.70e-88	71.22	hypothetical protein SDJN02_08744, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022946213.1	7.20e-86	70.24	uncharacterized protein LOC111450366 [Cucurbita moschata]	[more]

BLAST of IVF0023364 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20110.1	7.7e-34	58.59	Dynein light chain type 1 family protein	[more]
AT1G23220.1	2.3e-17	45.00	Dynein light chain type 1 family protein	[more]
AT1G52240.2	1.2e-13	40.00	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	7.5e-13	38.10	Dynein light chain type 1 family protein	[more]
AT4G27360.1	1.9e-11	37.89	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 83..183 e-value: 1.7E-31 score: 120.6
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 88..183 e-value: 8.2E-25 score: 87.0
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 49..189
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 87..183 e-value: 4.2E-28 score: 99.5
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 87..183
None	No IPR available	PANTHER	PTHR11886:SF37	DYNEIN LIGHT CHAIN-LIKE PROTEIN	coord: 49..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023364.2	IVF0023364.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005874	microtubule
molecular_function	GO:0005515	protein binding