IVF0023290 (gene) Melon (IVF77) v1

Overview


Name	IVF0023290
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	6,7-dimethyl-8-ribityllumazine synthase
Location	chr11: 24169125 .. 24169776 (-)
RNA-Seq Expression	IVF0023290
Synteny	IVF0023290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAACAGTTTAAGATGCTGTTTAGCTTGTGTTCTTCCTTGTGGAGCTTTAGATTTGATCCGAATCGTCCATTTAAACGGCCACGTCGAAGAAATTACTCATCCGATCACCGCCGGCGACGTCCTAAAAGCCAACCCAAATCACGTCCTTAGTAAGCCTTCTTCACAAGGAGTTGTTCGCCGGATTCTGATCCTCTCGCCCGAATCCGAGCTCAAAAGGGGAAGCATCTATTTCTTGATTCCGTCCACTTCTCTGCCGGAGAAGAAAAGAAACGCTGGAACCACCCTTAAAACTCCTTCAAGAAAAGTAAAAAATTGCACCGTCGCTGCCGTGCCCACCGCCGCCGCAGACAGTGACTCTTACCTCTCCGATGTTGTCTCCGACAAAAAACCGTCGCGGCGGGAACGACGCAGCGGCAGCCGGGTTATCGTATGGCGGCCCCATTTAGAGAGCATTTCTGAAGACTAAACAAATTATACTTTACATATCAAAATTTAATTTTTGCCCACGCCGGAATCTGAATTCCCGGCGAAGCGGAGGGGTAATTTGGGTTTTTTCTCTCTTTTTTACTGGGGGGTAAGTTTGTTATTAATCATCCAGTTTTTTTTTCCGGGTTGTGAAATCTTGAAAAGAAAAGGAGAAGACTCGG

mRNA sequence

ATGGGTAACAGTTTAAGATGCTGTTTAGCTTGTGTTCTTCCTTGTGGAGCTTTAGATTTGATCCGAATCGTCCATTTAAACGGCCACGTCGAAGAAATTACTCATCCGATCACCGCCGGCGACGTCCTAAAAGCCAACCCAAATCACGTCCTTAGTAAGCCTTCTTCACAAGGAGTTGTTCGCCGGATTCTGATCCTCTCGCCCGAATCCGAGCTCAAAAGGGGAAGCATCTATTTCTTGATTCCGTCCACTTCTCTGCCGGAGAAGAAAAGAAACGCTGGAACCACCCTTAAAACTCCTTCAAGAAAAGTAAAAAATTGCACCGTCGCTGCCGTGCCCACCGCCGCCGCAGACAGTGACTCTTACCTCTCCGATGTTGTCTCCGACAAAAAACCGTCGCGGCGGGAACGACGCAGCGGCAGCCGGGTTATCGTATGGCGGCCCCATTTAGAGAGCATTTCTGAAGACTAAACAAATTATACTTTACATATCAAAATTTAATTTTTGCCCACGCCGGAATCTGAATTCCCGGCGAAGCGGAGGGGTAATTTGGGTTTTTTCTCTCTTTTTTACTGGGGGGTAAGTTTGTTATTAATCATCCAGTTTTTTTTTCCGGGTTGTGAAATCTTGAAAAGAAAAGGAGAAGACTCGG

Coding sequence (CDS)

ATGGGTAACAGTTTAAGATGCTGTTTAGCTTGTGTTCTTCCTTGTGGAGCTTTAGATTTGATCCGAATCGTCCATTTAAACGGCCACGTCGAAGAAATTACTCATCCGATCACCGCCGGCGACGTCCTAAAAGCCAACCCAAATCACGTCCTTAGTAAGCCTTCTTCACAAGGAGTTGTTCGCCGGATTCTGATCCTCTCGCCCGAATCCGAGCTCAAAAGGGGAAGCATCTATTTCTTGATTCCGTCCACTTCTCTGCCGGAGAAGAAAAGAAACGCTGGAACCACCCTTAAAACTCCTTCAAGAAAAGTAAAAAATTGCACCGTCGCTGCCGTGCCCACCGCCGCCGCAGACAGTGACTCTTACCTCTCCGATGTTGTCTCCGACAAAAAACCGTCGCGGCGGGAACGACGCAGCGGCAGCCGGGTTATCGTATGGCGGCCCCATTTAGAGAGCATTTCTGAAGACTAA

Protein sequence

MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSDSYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED

Homology

[Close]

BLAST of IVF0023290 vs. ExPASy TrEMBL
Match: A0A5A7UMR0 (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold55219G00010 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.0e-80
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120
           RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD
Sbjct: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120

Query: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 157
           SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED
Sbjct: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 156

[Close]

BLAST of IVF0023290 vs. ExPASy TrEMBL
Match: A0A1S3CK32 (uncharacterized protein LOC103501874 OS=Cucumis melo OX=3656 GN=LOC103501874 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.0e-80
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120
           RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD
Sbjct: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120

Query: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 157
           SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED
Sbjct: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 156

[Close]

BLAST of IVF0023290 vs. ExPASy TrEMBL
Match: A0A0A0KBY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G217470 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 9.8e-75
Identity = 150/156 (96.15%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAGDVLKANPNHVLSKPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120
           RRILILSPESELKRGSIYFLIPSTSLPEKKRNA TTLKTPSRKVKNCTVAAVPT  AD+D
Sbjct: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPT-TADTD 120

Query: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 157
           SYLSDVVSDKKPSRRERR GSRVIVWRPHLESISED
Sbjct: 121 SYLSDVVSDKKPSRRERR-GSRVIVWRPHLESISED 154

[Close]

BLAST of IVF0023290 vs. ExPASy TrEMBL
Match: A0A6J1FWT9 (uncharacterized protein LOC111448946 OS=Cucurbita moschata OX=3662 GN=LOC111448946 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.4e-67
Identity = 134/156 (85.90%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAG+VLKANPNHVL+KPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLKANPNHVLTKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120
           RRILILSPESELKRG+IYF+IP+TS PEKKRNAG++LKTPS K KNC      TA ADSD
Sbjct: 61  RRILILSPESELKRGTIYFVIPATSRPEKKRNAGSSLKTPSSKAKNC------TATADSD 120

Query: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 157
           SYLSDVVSDKKPSRR+RR G+RV+VWRPHLESISED
Sbjct: 121 SYLSDVVSDKKPSRRDRR-GARVVVWRPHLESISED 149

[Close]

BLAST of IVF0023290 vs. ExPASy TrEMBL
Match: A0A6J1L2H4 (uncharacterized protein LOC111499799 OS=Cucurbita maxima OX=3661 GN=LOC111499799 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.7e-66
Identity = 133/156 (85.26%), Postives = 142/156 (91.03%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHL+GHVEEI HPITAG+VLKANPNHVLSKPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLSGHVEEIAHPITAGEVLKANPNHVLSKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120
           RRILILSPESELKRGSIYFLIP+TSLPEKK+N GTT K  S+K KN T AAVP    D+ 
Sbjct: 61  RRILILSPESELKRGSIYFLIPATSLPEKKKNGGTTFKNSSKKTKNST-AAVP---LDAT 120

Query: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 157
           SYLSD+VSDKKPSRR+RR GSRV+VWRPHLESISED
Sbjct: 121 SYLSDIVSDKKPSRRDRRGGSRVVVWRPHLESISED 152

[Close]

BLAST of IVF0023290 vs. NCBI nr
Match: XP_008463824.1 (PREDICTED: uncharacterized protein LOC103501874 [Cucumis melo] >KAA0057142.1 6,7-dimethyl-8-ribityllumazine synthase [Cucumis melo var. makuwa] >TYK24172.1 6,7-dimethyl-8-ribityllumazine synthase [Cucumis melo var. makuwa])

HSP 1 Score: 311 bits (797), Expect = 7.67e-107
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120
           RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD
Sbjct: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120

Query: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 156
           SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED
Sbjct: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 156

[Close]

BLAST of IVF0023290 vs. NCBI nr
Match: XP_004149378.1 (uncharacterized protein LOC101207122 [Cucumis sativus] >KGN47230.1 hypothetical protein Csa_017034 [Cucumis sativus])

HSP 1 Score: 292 bits (747), Expect = 3.02e-99
Identity = 150/156 (96.15%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAGDVLKANPNHVLSKPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120
           RRILILSPESELKRGSIYFLIPSTSLPEKKRNA TTLKTPSRKVKNCTVAAVPT A D+D
Sbjct: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVAAVPTTA-DTD 120

Query: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 156
           SYLSDVVSDKKPSRRERR GSRVIVWRPHLESISED
Sbjct: 121 SYLSDVVSDKKPSRRERR-GSRVIVWRPHLESISED 154

[Close]

BLAST of IVF0023290 vs. NCBI nr
Match: XP_038902054.1 (uncharacterized protein LOC120088703 [Benincasa hispida])

HSP 1 Score: 289 bits (740), Expect = 3.53e-98
Identity = 148/156 (94.87%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAGDVLKANPNHVLSKPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120
           RRILILSPESELKRGSIYFLIP+TSLPEKKRNAGTTLKTPSRKVK+CTVAAV +AAAD D
Sbjct: 61  RRILILSPESELKRGSIYFLIPATSLPEKKRNAGTTLKTPSRKVKHCTVAAV-SAAADGD 120

Query: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 156
           SYLSDVVSDKKPSRRERR GSRV+VWRPHLESISED
Sbjct: 121 SYLSDVVSDKKPSRRERR-GSRVVVWRPHLESISED 154

[Close]

BLAST of IVF0023290 vs. NCBI nr
Match: XP_022944509.1 (uncharacterized protein LOC111448946 [Cucurbita moschata])

HSP 1 Score: 266 bits (681), Expect = 2.94e-89
Identity = 134/156 (85.90%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAG+VLKANPNHVL+KPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLKANPNHVLTKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120
           RRILILSPESELKRG+IYF+IP+TS PEKKRNAG++LKTPS K KNCT      A ADSD
Sbjct: 61  RRILILSPESELKRGTIYFVIPATSRPEKKRNAGSSLKTPSSKAKNCT------ATADSD 120

Query: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 156
           SYLSDVVSDKKPSRR+RR G+RV+VWRPHLESISED
Sbjct: 121 SYLSDVVSDKKPSRRDRR-GARVVVWRPHLESISED 149

[Close]

BLAST of IVF0023290 vs. NCBI nr
Match: KAG6570631.1 (hypothetical protein SDJN03_29546, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266 bits (679), Expect = 5.94e-89
Identity = 134/156 (85.90%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAG+VLKANPNHVL+KPSSQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLKANPNHVLTKPSSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADSD 120
           RRILILSPESELKRG+IYF+IP+TSLPEKKRNAG++LKTPS K KNCT      A ADSD
Sbjct: 61  RRILILSPESELKRGTIYFVIPATSLPEKKRNAGSSLKTPSSKAKNCT------ATADSD 120

Query: 121 SYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISED 156
           SYLSDVVSDKKPSRR+RR G+RV+VWRP LESISED
Sbjct: 121 SYLSDVVSDKKPSRRDRR-GARVVVWRPRLESISED 149

[Close]

BLAST of IVF0023290 vs. TAIR 10
Match: AT1G06980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 184.9 bits (468), Expect = 5.0e-47
Identity = 105/167 (62.87%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNG+VEEIT  ITAG++L+ANPNHVLSKP SQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITRSITAGEILQANPNHVLSKPCSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTT------LKTPSRKVKNCTVAAVPT 120
           R+ILILSPESELKRGSIYFLIP +SLPEKKR    T      L+ PS       +     
Sbjct: 61  RKILILSPESELKRGSIYFLIPDSSLPEKKRRRKDTPRRKKNLQNPSADAAGREIKGDEE 120

Query: 121 AAADSDSYLSDVVSDKKPSR--RERRSGSR---VIVWRPHLESISED 157
                + YL +VVS     +  R RR  SR   V  WRP L+SISED
Sbjct: 121 CVKLCEKYLEEVVSSASTGKEHRHRRRHSRSASVSTWRPLLDSISED 167

[Close]

BLAST of IVF0023290 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 184.5 bits (467), Expect = 6.5e-47
Identity = 107/182 (58.79%), Postives = 122/182 (67.03%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSSQGVV 60
           MGNSLRCCLACVLPCGALDLIRIVHLNGHV+EIT P+TAG++L+ANPNHVLSKP SQGVV
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKPCSQGVV 60

Query: 61  RRILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPT------ 120
           R+ILILSPESELKRGSIYFLIP TS+PEKK       KT  RK   C    + +      
Sbjct: 61  RKILILSPESELKRGSIYFLIPDTSMPEKK-------KTKKRKELRCRKKPLESGNDINS 120

Query: 121 --AAADSD----------SYLSDVVSDKKPS-----RRERRSGSR---VIVWRPHLESIS 157
              + + D           YL DV+  +K S      R RR  SR   V  WRPHL+SI+
Sbjct: 121 DHVSTNKDLDGHCLTLCEKYLEDVMLSEKMSSAGKENRHRRKHSRSASVSTWRPHLDSIT 175

[Close]

BLAST of IVF0023290 vs. TAIR 10
Match: AT1G29195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 134.4 bits (337), Expect = 7.8e-32
Identity = 83/193 (43.01%), Postives = 115/193 (59.59%), Query Frame = 0


Query: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEITHPITAGDVLKANPNHVLSKPSS---- 60
           M  ++RCC+AC+LPCGALD+IRIVH NGHVEEI+  ITA +++KA+P HVL KPSS    
Sbjct: 1   MKETIRCCIACILPCGALDVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTSD 60

Query: 61  ---QGVV--RRILILSPESELKRGSIYFLIPST---------SLPEKKRNAGTTLKTPSR 120
              + V+   +I+I+ PE+EL+RG IYFL+P+T          +  +K NA   +K  S+
Sbjct: 61  HDERDVISATKIVIVPPEAELQRGKIYFLMPATKSDKCAGGGKIRREKSNANAVVKKRSQ 120

Query: 121 --------------------KVKNCTVAAVPTAAADSDSYLSDVVSDKKPSRRERRSGSR 156
                               K KN            SD YL++++S+K  ++++RR G R
Sbjct: 121 YRRQHRDGDEKCNGGESNDVKDKNYE----KDLLISSDRYLTEILSEKVATQKDRRKG-R 180

[Close]

BLAST of IVF0023290 vs. TAIR 10
Match: AT5G50090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 2.8e-05
Identity = 48/159 (30.19%), Postives = 74/159 (46.54%), Query Frame = 0


Query: 15  CGALDLIRIV--HLNGHVEEITHPITAGDVLKANPNH---------VLSKPSS--QGVVR 74
           C A+D  R+V  H NG  E+++ P++A  V+K NP H          LS  SS   G +R
Sbjct: 4   CQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHGGPLR 63

Query: 75  --RILILSPESELKRGSIYFLIPSTSLPE---KKRNAGTTLKTPSRKVKNCTVAAVPTAA 134
             RI +L P   L  G +Y LI +  + +    K+ +    ++     K   V A+ +  
Sbjct: 64  LTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKESKGSDDKLEMVKAINSTK 123

Query: 135 ADSDSYLSDVVSDKKPSRRERRSGSRVIVWRPHLESISE 156
            D++  L     +K+ SR  R        W+P L+SISE
Sbjct: 124 LDNEDQLQMKKQEKERSRISRS-------WQPSLQSISE 155

[Close]

BLAST of IVF0023290 vs. TAIR 10
Match: AT5G50090.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04
Identity = 48/157 (30.57%), Postives = 71/157 (45.22%), Query Frame = 0


Query: 15  CGALDLIRIV--HLNGHVEEITHPITAGDVLKANPNH---------VLSKPSS--QGVVR 74
           C A+D  R+V  H NG  E+++ P++A  V+K NP H          LS  SS   G +R
Sbjct: 4   CQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHGGPLR 63

Query: 75  --RILILSPESELKRGSIYFLIPSTSLPEKKRNAGTTLKTPSRKVKNCTVAAVPTAAADS 134
             RI +L P   L  G +Y LI +     K+   G   K  S+  K          + D 
Sbjct: 64  LTRIKLLRPTDTLVLGHVYRLITT-----KEVMKGLMAKKCSKLKKE------SKGSDDK 123

Query: 135 DSYLSDVVSDKKPSRRERRSGSRVI-VWRPHLESISE 156
              +  + S K  +  + +  SR+   W+P L+SISE
Sbjct: 124 LEMVKAINSTKLDNEDQEKERSRISRSWQPSLQSISE 149

The following BLAST results are available for this feature:

BLAST of IVF0023290 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0023290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMR0	2.0e-80	100.00	6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CK32	2.0e-80	100.00	uncharacterized protein LOC103501874 OS=Cucumis melo OX=3656 GN=LOC103501874 PE=...	[more]
A0A0A0KBY5	9.8e-75	96.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G217470 PE=4 SV=1	[more]
A0A6J1FWT9	3.4e-67	85.90	uncharacterized protein LOC111448946 OS=Cucurbita moschata OX=3662 GN=LOC1114489...	[more]
A0A6J1L2H4	3.7e-66	85.26	uncharacterized protein LOC111499799 OS=Cucurbita maxima OX=3661 GN=LOC111499799...	[more]

BLAST of IVF0023290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463824.1	7.67e-107	100.00	PREDICTED: uncharacterized protein LOC103501874 [Cucumis melo] >KAA0057142.1 6,7...	[more]
XP_004149378.1	3.02e-99	96.15	uncharacterized protein LOC101207122 [Cucumis sativus] >KGN47230.1 hypothetical ...	[more]
XP_038902054.1	3.53e-98	94.87	uncharacterized protein LOC120088703 [Benincasa hispida]	[more]
XP_022944509.1	2.94e-89	85.90	uncharacterized protein LOC111448946 [Cucurbita moschata]	[more]
KAG6570631.1	5.94e-89	85.90	hypothetical protein SDJN03_29546, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of IVF0023290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06980.1	5.0e-47	62.87	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G30230.1	6.5e-47	58.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G29195.1	7.8e-32	43.01	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G50090.1	2.8e-05	30.19	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G50090.2	1.4e-04	30.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..155 e-value: 6.1E-35 score: 121.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..141
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..156
None	No IPR available	PANTHER	PTHR33052:SF26	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	coord: 1..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023290.1	IVF0023290.1	mRNA