IVF0023226 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTTCACGGCTTCATTCTCTGGTATTGATTTTGATTTGAGAAAAAAAGGAATATATGAAAACACCAGGAAATTTCATAAAATGGTCATTTGAATTTCTGTTTCTTGTGGCCAAACACATTTTTCCTCGATACAGTCAAAGGACCATGGAGATCCATCCTTCAACACCTTGAACTTATAAAGGATAGTCACAATTAACGTGGGAAATGGAAATAACACCTCCTTTTGGAATGATAGTTGGGAGCAACTTCTGGGAAGATGAACATGGATGGAACATTTCTTATAGGAGAAACTTAAAAGAGGAGGAATTTGAAGATTGGTTGACTTTGATGAATCTCCGATCCACTCTCAATCCTACCACTTCTGGAGATAACGGAGATAAAAGGACTTGGCGTCGACAAGAATGGGAACTTCTCCTTCTCTTCACTTTTGGATGCAATTTAGACGTACTTTCACTCAAAAAAGTCAAATTCTTCTAG ATGTTCTTCACGGCTTCATTCTCTGGTATTGATTTTGATTTGAGAAAAAAAGGAATATATGAAAACACCAGGAAATTTCATAAAATGTCACAATTAACGTGGGAAATGGAAATAACACCTCCTTTTGGAATGATAGTTGGGAGCAACTTCTGGGAAGATGAACATGGATGGAACATTTCTTATAGGAGAAACTTAAAAGAGGAGGAATTTGAAGATTGGTTGACTTTGATGAATCTCCGATCCACTCTCAATCCTACCACTTCTGGAGATAACGGAGATAAAAGGACTTGGCGTCGACAAGAATGGGAACTTCTCCTTCTCTTCACTTTTGGATGCAATTTAGACGTACTTTCACTCAAAAAAGTCAAATTCTTCTAG ATGTTCTTCACGGCTTCATTCTCTGGTATTGATTTTGATTTGAGAAAAAAAGGAATATATGAAAACACCAGGAAATTTCATAAAATGTCACAATTAACGTGGGAAATGGAAATAACACCTCCTTTTGGAATGATAGTTGGGAGCAACTTCTGGGAAGATGAACATGGATGGAACATTTCTTATAGGAGAAACTTAAAAGAGGAGGAATTTGAAGATTGGTTGACTTTGATGAATCTCCGATCCACTCTCAATCCTACCACTTCTGGAGATAACGGAGATAAAAGGACTTGGCGTCGACAAGAATGGGAACTTCTCCTTCTCTTCACTTTTGGATGCAATTTAGACGTACTTTCACTCAAAAAAGTCAAATTCTTCTAG MFFTASFSGIDFDLRKKGIYENTRKFHKMSQLTWEMEITPPFGMIVGSNFWEDEHGWNISYRRNLKEEEFEDWLTLMNLRSTLNPTTSGDNGDKRTWRRQEWELLLLFTFGCNLDVLSLKKVKFF Homology
BLAST of IVF0023226 vs. ExPASy TrEMBL
Match: A0A0A0K3T0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G268520 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 4.7e-19 Identity = 62/118 (52.54%), Postives = 64/118 (54.24%), Query Frame = 0
BLAST of IVF0023226 vs. ExPASy TrEMBL
Match: A0A5A7T1C2 (Choline-phosphate cytidylyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold852G00180 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12 Identity = 42/64 (65.62%), Postives = 46/64 (71.88%), Query Frame = 0
BLAST of IVF0023226 vs. ExPASy TrEMBL
Match: A0A5A7UVQ5 (Retrotransposon protein, putative, unclassified OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9829G00060 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 8.8e-10 Identity = 39/77 (50.65%), Postives = 44/77 (57.14%), Query Frame = 0
BLAST of IVF0023226 vs. NCBI nr
Match: KGN44355.1 (hypothetical protein Csa_016666 [Cucumis sativus]) HSP 1 Score: 103 bits (256), Expect = 1.25e-25 Identity = 62/118 (52.54%), Postives = 64/118 (54.24%), Query Frame = 0
BLAST of IVF0023226 vs. NCBI nr
Match: KAA0035255.1 (choline-phosphate cytidylyltransferase [Cucumis melo var. makuwa] >TYK07580.1 choline-phosphate cytidylyltransferase [Cucumis melo var. makuwa]) HSP 1 Score: 82.4 bits (202), Expect = 3.75e-17 Identity = 42/64 (65.62%), Postives = 46/64 (71.88%), Query Frame = 0
BLAST of IVF0023226 vs. NCBI nr
Match: KAA0057629.1 (retrotransposon protein, putative, unclassified [Cucumis melo var. makuwa]) HSP 1 Score: 72.4 bits (176), Expect = 1.54e-13 Identity = 39/77 (50.65%), Postives = 44/77 (57.14%), Query Frame = 0
BLAST of IVF0023226 vs. NCBI nr
Match: KAE8649124.1 (hypothetical protein Csa_014630 [Cucumis sativus]) HSP 1 Score: 49.7 bits (117), Expect = 6.26e-04 Identity = 18/32 (56.25%), Postives = 27/32 (84.38%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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