IVF0023176 (gene) Melon (IVF77) v1

Overview


Name	IVF0023176
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Mitochondrial import inner membrane translocase, subunit TIM22
Location	chr12: 536584 .. 541432 (+)
RNA-Seq Expression	IVF0023176
Synteny	IVF0023176

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGCGTCGCTCCCTTCTTCCCTCCCATCCCACTCCCAGCAGGCCCTGACCTTTCTCCACTTTTCTCTCTCGCTCAGATTTCCCCTTCTTCTTGCTTTCTCACTTTTTATCTCTCTTCTTCAACCTTTCTTCTTCCTTCCACTTCAATGGCTTCCACTTCCGGAGATGGATTCTCTCCCGATCCACCCACCTCCAACGACGCCGAGCAGCCTCCAATTGCGCCTATGAGGATGCCTACAGTTGAAGAGATTCGCGGCCAAGATATTTGGGACAACTGTGCTGTTCGTAGTGTTGTTAGTGGAGTCATGGGTATGTCACCCAGTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTGTAAATTCTCTCCAGCATTCTCACTTACGTACTCTGCTCTAGTTTCTCTCCCGTCCAGCCAAACGAATCTTCGTTGTTTCGATCGATTACAACTGTGATAACTTTCCGTCTCTCTCAATATGATACGTTGAATTTGGTTTTTAAATGAGATTGGTTTATGTAGTTCGGGTCGGGGTAGTACTTTTTGTTTTCAAGTGGATTAAGACTGAGAGGCTTAATCTTTCTCATATAAACATTGTTAGTTTAAGCTTCACTAGAACAACCACCGTGTTAATTATCATTTCTGAGTTACTATTAGTTCATTACGTTTCTCCCTGACTATGAGATATATGCAGGTGGTGGGATTGGATTGTTCCTGGGATTATTTTTGGGGTCAATGGATAATTCATTGATGCAAGATGAGATGACTGCAAGACAACAATTTGTTTATACTGCAAAACAGATGGGACGGCGGGGTTGGGGTTCTGCAAAATCGTTTGCAGTCATGGGTTTTATTTTCTCAGCAGCAGAATGTGTTGTAGAAAAGGTATCAATTTCGTGTCTTATGCAAAATTGCACATGGTTGTTTATTTTATGGGTTCTAATTCCATGTCGCTGATGTTTGTAGGCTCGAGCTAAGCATGATATGACGAATACAGTAGTTGCTGGTTGTGTAACTGGTGGTGCAATATCAGCTAAAGGTTGGCCTTCTTACCCTTCGTACTTGCCTTATTTTCCAGTCAAGTGTTGCATACATGTGAATTTTCATAATCTCTGATTGCATTTTGTTGATATCTCATCTTTAAGTTGCCGGGGAATCACCTGTTTATTTTTCATGGTTGGCATCGATCACACTGCTGTGTCTGCATTCTGCACTAGATTGAGCCATTCTTTTTATTTTCATTTTTTTGCTATTTGCTAATATGCTCTAGCATTCTTTCGTATCTAGTAGCCTTGTTGGTAAAACTTATATATTCTTAAATTATAAACAATATCATTAATGTGTAAATTTTGCTAATGTAAAAAAATTCAAGGAGTAACCCTTTGAAAGATATTTCTCTTCTTTATCTCTCCTTTTCCCATTTTGAGTTTTGCTTTGTGGGAGAAGGTAAGGAAACACTTTTTTGGGAGGATCATCGGGTGGGGGATAGTCCGCTCTCTTCGACGTTTCCTAGTTTATATCATTTGTCTTCTTTGAAAAATTGCTTGGTGTCAGATGTTTTGGTGTGGTATGGGAACTCAATCTCTTTCTCCTTTGGTTTTCATCGTGCGTTCTCTAATGGAGAGTCGAAAATGTGACTTCTTTTCTTTCTTTGATTGACATTTTAGATTTTAGATTGGGGAGAAGAGATGTTCGAGTTTGGAGCCCTAATCCGGTGGAGGGATTTTCTTGCAAGTCTTTCTTTAGGATTTTAGTCAACCATTCTTCTGTTGTTGAGTCGGTCTTCATTGTTTTATGGAGTTTAAAGATTCCTAAGAAGTCAGGTTCTTTGTCTGGCAAGTTTTGCTTGGTTTTGCGAACTCAATGGTTAAGGTCTCGAGAAAGCTGCCTCCGTTAATGGGTCCTTTTTACTGCATTCTTTGTCAGAAGGCAGAGGAAAGCCTGAATCACTTTATTTGGGTGTGGCTGTAGGCAAGATCAATTTGGATCCTCTTTTTTTCAAGAGTTTGATGTTTCATTAGCTTGCCAGAGGAACATTCACATGATGATCGGGGAATTCCTCCTTCACCCTTCTTTTAGAGCGAAAGGGCATTTCCTTTTGGGTGATGGGGTGTGTGATGTGATTTGGGTTTGTGGGGGGAGAAACAACAAAGTGTTCAGGGGCGTGGATAGGAACCCTAGCGAGGTTTGGTCCTTGATGAGGTTTCATGTTTCACTTTGGGCTTCAGTTTTAAAGGTTTTTTTGTAGTTATTCTATAAGCAACTATTTTACTTTGTTGGAAACCCTTTCTTTAGTGGGATTCTCTTTTGGGGCTTGGTTTTTTGGATGCCATTGTATTCTTTCATTTTTTTCTCAATGAAAGCATTTGTTTCAATAAAATAACAATAATAAAAAAGTTAAGGATTTTGCTTATAGACAGACACCCTGAATTGGTTTATAAATTATACGTGGGAGGGGAGTAGGATCCTTGAATTTCTGCTACTTCTGTTTAGCCAAACTTCTCTTAGAATAAATTTAAAAGCATTTAGTCAAAGTTTCTCCACAACAACCGAAAGGTAAAGGACGACAGAAAAAATGTCTAACATTCTCAGTATATTCTTGGAAACAAATTGCAATTTGAGAAACAAACCTGTGCTCTGTGCAGATTCCTTTCCTGGTCTTGTTCTTTGTTTAAGTCTCCTGGTAAAGTCCAAAGTTAAGCTTTTACCTTCATAGGATATACCTGTCTTTTCCTGAGAAGTTCATCTTTGTTTGTGTAAGCCTCAAGTAAAGTCCAAAGTGAAGCTGTTATCTTCATTGGATAATCGTGTCTTTTCCTGAGATGTTCATCTTTGTTTGTGTAAACCTCCAAGTGAAGTCCAAAGTGAAACTTTTTCCTTCATTGGGTACTTGTCATTTCTTTTCCTCATTAACCCGTCTTTCTGAATTCTCATTGCTGCTAACATTACAGTTTTTCCGCATCAGAGAAGGATTTTCCATTCCTAAATCTCCCCGTCTTTCAAATTTCAATGCAAATTCAAGAACAGAGAGCTATGTTAGTGAAACTGCCTTACAGCTACAAGTTTGCTACTAGTTAGATCATACATAGCCTGTGAATGATGTTTGACAGTGGCTGGTCCACAATCCAAATATCTTAAAAAGTTTAACATGTTTTCTCTGCCAACGTGTTTAATGAAATCTTAACTTCTACAAAAAGAATGATTGATAGAACTTAGGAGGAAAGACCACCCATGAACGTAGGTGAAACACCCATTGAATGAACTACTTAACAATTACCCAAGAAGGGGGGAGGTTGTTAGCTTGGTTCGTAGTTGCTTCCTCTTTGATTGGTAGTAGGAGCTCAATTTTTTTGCATGCCATTCTTGTACTGGCTCATACAGCCAAAGACATGTACATTCTTAATGTGGAGAAAATACTAGGACAGTAAGAGGAGAATTTTGGTAAAGCTTTAGGAGCAATCTCAAGAAAATTTTCTCTAGAATGATATAGGCATGCCGTCTGATCATCACTTAGGAAATGGGGTATGGTTCTTGTTGACTTAACTCTCGTTAAACCTTTGATTATAAAACGTATCCCTGATTTTACAAGATTTGAAGTAGAACCAACTGCCATCTGACGGTACACTCCTCGGCTCCTCTTCACTGTTAGCAAGAGCAAAGCCGAATTTATTGAAGAGCTATTTTGTTGGGTCCCGTTGGTTGAATTTGCCTAAAACTGAACTGGTGTTTAGCAATTCAACCAAGTAGTCTGGGGTTTCTAATCCCAGTCGTTCTCAGTTGAAGTAAACAACGAGGGAGGGACCTCCAATGGGTTTTTGGATAACAAGAGATGGTTAAAATTTTATTTTGATCTTTTACCTTGGACCTCCTTTTATTTTGGTACTTCCCAATGTTTCTATACTTTCTATAGCTTGAAGTTATTTGTTGTTGTTTTGTCAAACATGGTAAAGTAATAATAATAATAATTTTCATTAAGAAAAGTCACGATGGGAGTATGCTTCTAAAATATAGAGGGGGAAGAGGGGGAAGAATGAATACTCCCTCTAAGGATTTTATTTGAACACCAAAAGACTAGGAGAGAATGAGTTATAACCATGGTCACTACCTACTTAGGATTTAATGGTTGAGGTGTGAGCAAGTTGATCCATCTATCTAGGACTTAAATATAGTAAAACTATTTTTTAAGATTTATCGAAAGTATAGGGATTAAATTTAAACCATTTGAAAGAACAGAGTGACATAGAGACCAAAATGATATTTAAACCAAAATCCTTGAAATTGATAGATGATTTTTTTGGTGCCTTCAGTAGAAATCTGAATTGTAGTTTCTGCTTTAACTTTGCATAGCTACTCTGCATCAAAGTTAACGACAATCTCTTTGGCCTCCTACCATTCTCTTATCTATTGATCAATGTATGAAGAGTGAATGGACAAAATAACATAACTGGCTATGTTAACTGAGATTGCCTTTATTTTAACGTCGTCAATTATACACTTCTCATTTTCATCCCAAGCTGTCACATCTCATCTTATATGGTCTTAATCTCAGGTGGCCCAAAGGCAGCTTGTGCTGGTTGTGCAGGTTTTGCAGCATTCTCAGTGTTGATAGAGAAGTTTTTGGAAAGACATACTTGAGCTGCGTTTGTGCTCACAATTTTCTGATAGCAAAAGCAAATCAATGGTAGAGAAATAATAGTTAGCCTGCAGTGTTACCATTCTTTTGATCGTAAAAATATGAACCTTCTTTCTTTTTTTTTATCTTTATTTGGGATAACTTTTAGAATATTGTCCCCATTGTTTCAGTAAACATTATTCACAATTCCATTTGATTTGGAAGTTATTTATTTTAATAGAGG

mRNA sequence

TTTGCGTCGCTCCCTTCTTCCCTCCCATCCCACTCCCAGCAGGCCCTGACCTTTCTCCACTTTTCTCTCTCGCTCAGATTTCCCCTTCTTCTTGCTTTCTCACTTTTTATCTCTCTTCTTCAACCTTTCTTCTTCCTTCCACTTCAATGGCTTCCACTTCCGGAGATGGATTCTCTCCCGATCCACCCACCTCCAACGACGCCGAGCAGCCTCCAATTGCGCCTATGAGGATGCCTACAGTTGAAGAGATTCGCGGCCAAGATATTTGGGACAACTGTGCTGTTCGTAGTGTTGTTAGTGGAGTCATGGGTGGTGGGATTGGATTGTTCCTGGGATTATTTTTGGGGTCAATGGATAATTCATTGATGCAAGATGAGATGACTGCAAGACAACAATTTGTTTATACTGCAAAACAGATGGGACGGCGGGGTTGGGGTTCTGCAAAATCGTTTGCAGTCATGGGTTTTATTTTCTCAGCAGCAGAATGTGTTGTAGAAAAGGCTCGAGCTAAGCATGATATGACGAATACAGTAGTTGCTGGTTGTGTAACTGGTGGTGCAATATCAGCTAAAGGTGGCCCAAAGGCAGCTTGTGCTGGTTGTGCAGGTTTTGCAGCATTCTCAGTGTTGATAGAGAAGTTTTTGGAAAGACATACTTGAGCTGCGTTTGTGCTCACAATTTTCTGATAGCAAAAGCAAATCAATGGTAGAGAAATAATAGTTAGCCTGCAGTGTTACCATTCTTTTGATCGTAAAAATATGAACCTTCTTTCTTTTTTTTTATCTTTATTTGGGATAACTTTTAGAATATTGTCCCCATTGTTTCAGTAAACATTATTCACAATTCCATTTGATTTGGAAGTTATTTATTTTAATAGAGG

Coding sequence (CDS)

ATGGCTTCCACTTCCGGAGATGGATTCTCTCCCGATCCACCCACCTCCAACGACGCCGAGCAGCCTCCAATTGCGCCTATGAGGATGCCTACAGTTGAAGAGATTCGCGGCCAAGATATTTGGGACAACTGTGCTGTTCGTAGTGTTGTTAGTGGAGTCATGGGTGGTGGGATTGGATTGTTCCTGGGATTATTTTTGGGGTCAATGGATAATTCATTGATGCAAGATGAGATGACTGCAAGACAACAATTTGTTTATACTGCAAAACAGATGGGACGGCGGGGTTGGGGTTCTGCAAAATCGTTTGCAGTCATGGGTTTTATTTTCTCAGCAGCAGAATGTGTTGTAGAAAAGGCTCGAGCTAAGCATGATATGACGAATACAGTAGTTGCTGGTTGTGTAACTGGTGGTGCAATATCAGCTAAAGGTGGCCCAAAGGCAGCTTGTGCTGGTTGTGCAGGTTTTGCAGCATTCTCAGTGTTGATAGAGAAGTTTTTGGAAAGACATACTTGA

Protein sequence

MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGLFLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT

Homology

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BLAST of IVF0023176 vs. ExPASy Swiss-Prot
Match: A2RVP7 (Mitochondrial import inner membrane translocase subunit TIM22-1 OS=Arabidopsis thaliana OX=3702 GN=TIM22-1 PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 9.0e-63
Identity = 111/158 (70.25%), Postives = 134/158 (84.81%), Query Frame = 0


Query: 13  PPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGLFLGLFLGSMDNS 72
           PP ++D     I P+RMPT+EEIR Q++W+NCAVR+V SGVMGGG+GL +GLFLG++DN 
Sbjct: 16  PPVASDENSTQIQPIRMPTIEEIRAQEVWNNCAVRAVTSGVMGGGLGLMMGLFLGALDNP 75

Query: 73  LMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKARAKHDMTNTVVAG 132
           +  D MTARQQFV+TAKQMG+R W S K+FAVMG +FSAAEC+VEKARAKHD  NT +AG
Sbjct: 76  ITHDTMTARQQFVFTAKQMGQRSWNSCKTFAVMGLVFSAAECIVEKARAKHDTVNTAIAG 135

Query: 133 CVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT 171
           CVTGG++SA+GGPKAAC GCAGFA FSVLIEKF +RHT
Sbjct: 136 CVTGGSMSARGGPKAACIGCAGFATFSVLIEKFFDRHT 173

[Close]

BLAST of IVF0023176 vs. ExPASy Swiss-Prot
Match: A1XJK0 (Mitochondrial import inner membrane translocase subunit TIM22-4 OS=Arabidopsis thaliana OX=3702 GN=TIM22-4 PE=2 SV=3)

HSP 1 Score: 229.2 bits (583), Expect = 3.5e-59
Identity = 105/142 (73.94%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 29  MPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGLFLGLFLGSMDNSLMQDEMTARQQFVYTA 88
           MPT+EEIR Q++W+NCAVR+V SGVMGGG+GL +GLFLG++DN +  D MTARQQFV+TA
Sbjct: 1   MPTIEEIRAQEVWNNCAVRAVTSGVMGGGLGLMMGLFLGALDNPITHDTMTARQQFVFTA 60

Query: 89  KQMGRRGWGSAKSFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGAISAKGGPKAA 148
           KQMG+R W S K+FAVMG +FSAAEC+VEKARAKHD  NT +AGCVTGG++SA+GGPKAA
Sbjct: 61  KQMGQRSWNSCKTFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSARGGPKAA 120

Query: 149 CAGCAGFAAFSVLIEKFLERHT 171
           C GCAGFA FSVLIEKF +RHT
Sbjct: 121 CIGCAGFAIFSVLIEKFFDRHT 142

[Close]

BLAST of IVF0023176 vs. ExPASy Swiss-Prot
Match: Q2UAP8 (Mitochondrial import inner membrane translocase subunit tim22 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=tim22 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.2e-26
Identity = 60/132 (45.45%), Postives = 89/132 (67.42%), Query Frame = 0


Query: 42  DNCAVRSVVSGVMGGGIGLFLGLFLGSM--DNSLMQD-----EMTARQQFVYTAKQMGRR 101
           ++C V++V+SG MG G+G   GLF+ SM  D++         ++  R+Q     K MG R
Sbjct: 47  ESCPVKTVISGTMGFGLGGVFGLFMASMSYDSTFTPQGKAIMDLPWREQVRRGFKDMGSR 106

Query: 102 GWGSAKSFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAG 161
            W SAK+F ++G ++S  EC VE  RAK+D++N+V++GC+TGG + AK GP+AA AGCAG
Sbjct: 107 SWSSAKNFGIVGALYSGTECCVEGLRAKNDLSNSVISGCITGGILGAKAGPQAAAAGCAG 166

Query: 162 FAAFSVLIEKFL 167
           FAAFS  I+ ++
Sbjct: 167 FAAFSAAIDAYM 178

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BLAST of IVF0023176 vs. ExPASy Swiss-Prot
Match: A0A1D8PI78 (Mitochondrial import inner membrane translocase subunit TIM22 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=TIM22 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.0e-23
Identity = 62/160 (38.75%), Postives = 92/160 (57.50%), Query Frame = 0


Query: 21  QPPIAPMRMPTVEEIRGQ------DIWDNCAVRSVVSGVMGGGIGLFLGLFLGSM--DNS 80
           QPP  P++  T EE   +         ++C  ++V++GV G  +G F GLF+ SM  D  
Sbjct: 11  QPPKKPLQEMTQEEQAEEGARQMIGFMNSCPGKTVMAGVSGFALGGFFGLFMASMAYDTP 70

Query: 81  LMQD------EMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKARAKHDMT 140
           +  D      E+  +QQ       M +R + SAK+F  +G ++S  EC +E  RAKHD+ 
Sbjct: 71  IGTDAVKHISELPFKQQMKLQFTDMAKRSYSSAKNFGYIGMVYSGVECTIESLRAKHDIY 130

Query: 141 NTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFL 167
           N V AGC+TG  ++ + GP+AA  GCAGFAAFS+ I+ +L
Sbjct: 131 NGVSAGCITGAGLAIRAGPQAALVGCAGFAAFSLAIDMYL 170

[Close]

BLAST of IVF0023176 vs. ExPASy Swiss-Prot
Match: Q6BZY4 (Mitochondrial import inner membrane translocase subunit TIM22 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=TIM22 PE=3 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 3.5e-22
Identity = 64/166 (38.55%), Postives = 91/166 (54.82%), Query Frame = 0


Query: 8   GFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGLFLGLFLG 67
           G +P PP  +  +  P     M +   I G     +C  +SV++GV G G+G   GLF+ 
Sbjct: 9   GGAPTPPQGSFWDMTP-EQQGMYSANLIMG--TMQSCPGKSVMAGVTGFGLGGVFGLFMA 68

Query: 68  SMDNSL-------MQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR 127
           SM              ++  +QQ       MG+R W SAK+F  +G +FS  EC +E  R
Sbjct: 69  SMAYDAPVGMGVQTMSDLPFKQQMKIQFTDMGKRAWSSAKNFGFIGGVFSGTECCIESLR 128

Query: 128 AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFL 167
           AK+D+ N V AGC+TGG ++ K GP+AA  GCAGFAAFS  I+ ++
Sbjct: 129 AKNDIWNGVAAGCLTGGGLAVKAGPQAALVGCAGFAAFSAAIDVYM 171

[Close]

BLAST of IVF0023176 vs. ExPASy TrEMBL
Match: A0A1S3C5B1 (mitochondrial import inner membrane translocase subunit TIM22-4-like OS=Cucumis melo OX=3656 GN=LOC103497039 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.0e-89
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGL 60
           MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGL
Sbjct: 1   MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGL 60

Query: 61  FLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR 120
           FLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR
Sbjct: 61  FLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR 120

Query: 121 AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT 171
           AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT
Sbjct: 121 AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT 170

[Close]

BLAST of IVF0023176 vs. ExPASy TrEMBL
Match: A0A0A0M0Y0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533580 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.3e-77
Identity = 149/170 (87.65%), Postives = 158/170 (92.94%), Query Frame = 0


Query: 1   MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGL 60
           MASTSGDG S DPPTS+DA+ PPI P+RMPTVEEIRGQDIWDNCAVRSVVSGVMGGG+G 
Sbjct: 1   MASTSGDGSSLDPPTSSDAQLPPIQPVRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGLGF 60

Query: 61  FLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR 120
           F+GLFL S D S++QDEMTARQQFV TAKQMGRR WGSAKSFAVMG IFSAAECVVEKAR
Sbjct: 61  FVGLFLASTDTSMVQDEMTARQQFVNTAKQMGRRSWGSAKSFAVMGLIFSAAECVVEKAR 120

Query: 121 AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT 171
           AKHDMTNT+VAGCVTGG+ISAKGGPKAACAGCAGFAAFS LIEKFLERHT
Sbjct: 121 AKHDMTNTIVAGCVTGGSISAKGGPKAACAGCAGFAAFSALIEKFLERHT 170

[Close]

BLAST of IVF0023176 vs. ExPASy TrEMBL
Match: A0A6J1K8G7 (mitochondrial import inner membrane translocase subunit TIM22-4 OS=Cucurbita maxima OX=3661 GN=LOC111493200 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.0e-77
Identity = 145/170 (85.29%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGL 60
           MAS+SGDG S DP +S++ E+PP+ P+RMPTVEEIRGQDIW+NCAVRSVVSGVMGGG+GL
Sbjct: 1   MASSSGDGSSHDPASSSELEKPPLEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGL 60

Query: 61  FLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR 120
           F+GLFLG++DN LMQDEMTARQQFVYTAKQMGRR WGSAK+FAVMGF+FSAAECVVEKAR
Sbjct: 61  FMGLFLGALDNPLMQDEMTARQQFVYTAKQMGRRSWGSAKAFAVMGFVFSAAECVVEKAR 120

Query: 121 AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT 171
           AKHD+TNTVVAGCVTGG+ISAKGGPKAACAGCAGFAAFSV+IEKFL+RHT
Sbjct: 121 AKHDITNTVVAGCVTGGSISAKGGPKAACAGCAGFAAFSVVIEKFLDRHT 170

[Close]

BLAST of IVF0023176 vs. ExPASy TrEMBL
Match: A0A6J1G8S5 (mitochondrial import inner membrane translocase subunit TIM22-4 OS=Cucurbita moschata OX=3662 GN=LOC111452007 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.0e-77
Identity = 145/170 (85.29%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGL 60
           MAS+SGDG S DP +S++ E+PP+ P+RMPTVEEIRGQDIW+NCAVRSVVSGVMGGG+GL
Sbjct: 1   MASSSGDGSSHDPASSSELEKPPLEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGL 60

Query: 61  FLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR 120
           F+GLFLG++DN LMQDEMTARQQFVYTAKQMGRR WGSAK+FAVMGF+FSAAECVVEKAR
Sbjct: 61  FMGLFLGALDNPLMQDEMTARQQFVYTAKQMGRRSWGSAKAFAVMGFVFSAAECVVEKAR 120

Query: 121 AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT 171
           AKHD+TNTVVAGCVTGG+ISAKGGPKAACAGCAGFAAFSV+IEKFL+RHT
Sbjct: 121 AKHDITNTVVAGCVTGGSISAKGGPKAACAGCAGFAAFSVVIEKFLDRHT 170

[Close]

BLAST of IVF0023176 vs. ExPASy TrEMBL
Match: A0A6J1DKY7 (mitochondrial import inner membrane translocase subunit TIM22-4-like OS=Momordica charantia OX=3673 GN=LOC111022051 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 142/170 (83.53%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 1   MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGL 60
           MA+ +G+G S DP +SN+AE+PPI P+RMPTVEEIRGQDIW+NCAVRSVVSGVMGGG+GL
Sbjct: 1   MATNAGNGSSHDPTSSNEAEKPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGL 60

Query: 61  FLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR 120
           F+GLFLG++DN LMQ+EMTA+QQF++TAKQMGRR WGSAK+FAVMGFIFSAAECVVEKAR
Sbjct: 61  FMGLFLGALDNPLMQEEMTAKQQFIFTAKQMGRRSWGSAKAFAVMGFIFSAAECVVEKAR 120

Query: 121 AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT 171
           AKHD TNTVVAGCVTGG+ISAKGGPKAACAGCAGFAAFSVLIEKFL+RH+
Sbjct: 121 AKHDTTNTVVAGCVTGGSISAKGGPKAACAGCAGFAAFSVLIEKFLDRHS 170

[Close]

BLAST of IVF0023176 vs. NCBI nr
Match: XP_008457318.1 (PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4-like [Cucumis melo])

HSP 1 Score: 337 bits (864), Expect = 1.34e-116
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGL 60
           MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGL
Sbjct: 1   MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGL 60

Query: 61  FLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR 120
           FLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR
Sbjct: 61  FLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR 120

Query: 121 AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT 170
           AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT
Sbjct: 121 AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT 170

[Close]

BLAST of IVF0023176 vs. NCBI nr
Match: XP_038893922.1 (mitochondrial import inner membrane translocase subunit TIM22-4-like [Benincasa hispida])

HSP 1 Score: 303 bits (776), Expect = 3.51e-103
Identity = 150/170 (88.24%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGL 60
           MASTSGD  S DPPTSND+E PPI P+RMPT+EEIRGQDIW+NCAVRSVVSGVMGGG+GL
Sbjct: 1   MASTSGDRSSLDPPTSNDSENPPIEPIRMPTLEEIRGQDIWNNCAVRSVVSGVMGGGLGL 60

Query: 61  FLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR 120
           F+GLFLG++DN LMQDEMTA+QQFVYTAKQMGRR WGSAK+FAVMGFIFSAAECVVEKAR
Sbjct: 61  FMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFSAAECVVEKAR 120

Query: 121 AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT 170
           AKHDMTNTVVAGCVTGG+ISAKGGPKAACAGCAGFAAFSVLIEKFL+RH+
Sbjct: 121 AKHDMTNTVVAGCVTGGSISAKGGPKAACAGCAGFAAFSVLIEKFLDRHS 170

[Close]

BLAST of IVF0023176 vs. NCBI nr
Match: XP_004153539.1 (mitochondrial import inner membrane translocase subunit TIM22-4 [Cucumis sativus] >KGN65851.1 hypothetical protein Csa_023190 [Cucumis sativus])

HSP 1 Score: 297 bits (760), Expect = 9.64e-101
Identity = 149/170 (87.65%), Postives = 158/170 (92.94%), Query Frame = 0


Query: 1   MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGL 60
           MASTSGDG S DPPTS+DA+ PPI P+RMPTVEEIRGQDIWDNCAVRSVVSGVMGGG+G 
Sbjct: 1   MASTSGDGSSLDPPTSSDAQLPPIQPVRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGLGF 60

Query: 61  FLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR 120
           F+GLFL S D S++QDEMTARQQFV TAKQMGRR WGSAKSFAVMG IFSAAECVVEKAR
Sbjct: 61  FVGLFLASTDTSMVQDEMTARQQFVNTAKQMGRRSWGSAKSFAVMGLIFSAAECVVEKAR 120

Query: 121 AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT 170
           AKHDMTNT+VAGCVTGG+ISAKGGPKAACAGCAGFAAFS LIEKFLERHT
Sbjct: 121 AKHDMTNTIVAGCVTGGSISAKGGPKAACAGCAGFAAFSALIEKFLERHT 170

[Close]

BLAST of IVF0023176 vs. NCBI nr
Match: XP_022948292.1 (mitochondrial import inner membrane translocase subunit TIM22-4 [Cucurbita moschata] >XP_022998612.1 mitochondrial import inner membrane translocase subunit TIM22-4 [Cucurbita maxima] >XP_023523181.1 mitochondrial import inner membrane translocase subunit TIM22-4 [Cucurbita pepo subsp. pepo] >KAG6607337.1 Mitochondrial import inner membrane translocase subunit TIM22-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 296 bits (759), Expect = 1.37e-100
Identity = 145/170 (85.29%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGL 60
           MAS+SGDG S DP +S++ E+PP+ P+RMPTVEEIRGQDIW+NCAVRSVVSGVMGGG+GL
Sbjct: 1   MASSSGDGSSHDPASSSELEKPPLEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGL 60

Query: 61  FLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR 120
           F+GLFLG++DN LMQDEMTARQQFVYTAKQMGRR WGSAK+FAVMGF+FSAAECVVEKAR
Sbjct: 61  FMGLFLGALDNPLMQDEMTARQQFVYTAKQMGRRSWGSAKAFAVMGFVFSAAECVVEKAR 120

Query: 121 AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT 170
           AKHD+TNTVVAGCVTGG+ISAKGGPKAACAGCAGFAAFSV+IEKFL+RHT
Sbjct: 121 AKHDITNTVVAGCVTGGSISAKGGPKAACAGCAGFAAFSVVIEKFLDRHT 170

[Close]

BLAST of IVF0023176 vs. NCBI nr
Match: XP_022154905.1 (mitochondrial import inner membrane translocase subunit TIM22-4-like [Momordica charantia])

HSP 1 Score: 291 bits (745), Expect = 1.86e-98
Identity = 142/170 (83.53%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 1   MASTSGDGFSPDPPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGL 60
           MA+ +G+G S DP +SN+AE+PPI P+RMPTVEEIRGQDIW+NCAVRSVVSGVMGGG+GL
Sbjct: 1   MATNAGNGSSHDPTSSNEAEKPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGL 60

Query: 61  FLGLFLGSMDNSLMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKAR 120
           F+GLFLG++DN LMQ+EMTA+QQF++TAKQMGRR WGSAK+FAVMGFIFSAAECVVEKAR
Sbjct: 61  FMGLFLGALDNPLMQEEMTAKQQFIFTAKQMGRRSWGSAKAFAVMGFIFSAAECVVEKAR 120

Query: 121 AKHDMTNTVVAGCVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT 170
           AKHD TNTVVAGCVTGG+ISAKGGPKAACAGCAGFAAFSVLIEKFL+RH+
Sbjct: 121 AKHDTTNTVVAGCVTGGSISAKGGPKAACAGCAGFAAFSVLIEKFLDRHS 170

[Close]

BLAST of IVF0023176 vs. TAIR 10
Match: AT3G10110.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 241.1 bits (614), Expect = 6.4e-64
Identity = 111/158 (70.25%), Postives = 134/158 (84.81%), Query Frame = 0


Query: 13  PPTSNDAEQPPIAPMRMPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGLFLGLFLGSMDNS 72
           PP ++D     I P+RMPT+EEIR Q++W+NCAVR+V SGVMGGG+GL +GLFLG++DN 
Sbjct: 16  PPVASDENSTQIQPIRMPTIEEIRAQEVWNNCAVRAVTSGVMGGGLGLMMGLFLGALDNP 75

Query: 73  LMQDEMTARQQFVYTAKQMGRRGWGSAKSFAVMGFIFSAAECVVEKARAKHDMTNTVVAG 132
           +  D MTARQQFV+TAKQMG+R W S K+FAVMG +FSAAEC+VEKARAKHD  NT +AG
Sbjct: 76  ITHDTMTARQQFVFTAKQMGQRSWNSCKTFAVMGLVFSAAECIVEKARAKHDTVNTAIAG 135

Query: 133 CVTGGAISAKGGPKAACAGCAGFAAFSVLIEKFLERHT 171
           CVTGG++SA+GGPKAAC GCAGFA FSVLIEKF +RHT
Sbjct: 136 CVTGGSMSARGGPKAACIGCAGFATFSVLIEKFFDRHT 173

[Close]

BLAST of IVF0023176 vs. TAIR 10
Match: AT1G18320.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 229.2 bits (583), Expect = 2.5e-60
Identity = 105/142 (73.94%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 29  MPTVEEIRGQDIWDNCAVRSVVSGVMGGGIGLFLGLFLGSMDNSLMQDEMTARQQFVYTA 88
           MPT+EEIR Q++W+NCAVR+V SGVMGGG+GL +GLFLG++DN +  D MTARQQFV+TA
Sbjct: 1   MPTIEEIRAQEVWNNCAVRAVTSGVMGGGLGLMMGLFLGALDNPITHDTMTARQQFVFTA 60

Query: 89  KQMGRRGWGSAKSFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGAISAKGGPKAA 148
           KQMG+R W S K+FAVMG +FSAAEC+VEKARAKHD  NT +AGCVTGG++SA+GGPKAA
Sbjct: 61  KQMGQRSWNSCKTFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSARGGPKAA 120

Query: 149 CAGCAGFAAFSVLIEKFLERHT 171
           C GCAGFA FSVLIEKF +RHT
Sbjct: 121 CIGCAGFAIFSVLIEKFFDRHT 142

The following BLAST results are available for this feature:

BLAST of IVF0023176 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2RVP7	9.0e-63	70.25	Mitochondrial import inner membrane translocase subunit TIM22-1 OS=Arabidopsis t...	[more]
A1XJK0	3.5e-59	73.94	Mitochondrial import inner membrane translocase subunit TIM22-4 OS=Arabidopsis t...	[more]
Q2UAP8	5.2e-26	45.45	Mitochondrial import inner membrane translocase subunit tim22 OS=Aspergillus ory...	[more]
A0A1D8PI78	7.0e-23	38.75	Mitochondrial import inner membrane translocase subunit TIM22 OS=Candida albican...	[more]
Q6BZY4	3.5e-22	38.55	Mitochondrial import inner membrane translocase subunit TIM22 OS=Yarrowia lipoly...	[more]

BLAST of IVF0023176 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C5B1	2.0e-89	100.00	mitochondrial import inner membrane translocase subunit TIM22-4-like OS=Cucumis ...	[more]
A0A0A0M0Y0	2.3e-77	87.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533580 PE=4 SV=1	[more]
A0A6J1K8G7	3.0e-77	85.29	mitochondrial import inner membrane translocase subunit TIM22-4 OS=Cucurbita max...	[more]
A0A6J1G8S5	3.0e-77	85.29	mitochondrial import inner membrane translocase subunit TIM22-4 OS=Cucurbita mos...	[more]
A0A6J1DKY7	1.3e-75	83.53	mitochondrial import inner membrane translocase subunit TIM22-4-like OS=Momordic...	[more]

BLAST of IVF0023176 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457318.1	1.34e-116	100.00	PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4-like ...	[more]
XP_038893922.1	3.51e-103	88.24	mitochondrial import inner membrane translocase subunit TIM22-4-like [Benincasa ...	[more]
XP_004153539.1	9.64e-101	87.65	mitochondrial import inner membrane translocase subunit TIM22-4 [Cucumis sativus...	[more]
XP_022948292.1	1.37e-100	85.29	mitochondrial import inner membrane translocase subunit TIM22-4 [Cucurbita mosch...	[more]
XP_022154905.1	1.86e-98	83.53	mitochondrial import inner membrane translocase subunit TIM22-4-like [Momordica ...	[more]

BLAST of IVF0023176 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10110.1	6.4e-64	70.25	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT1G18320.1	2.5e-60	73.94	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 44..159 e-value: 5.2E-31 score: 107.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR14110:SF0	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22	coord: 17..169
IPR039175	Mitochondrial import inner membrane translocase subunit TIM22	PANTHER	PTHR14110	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22	coord: 17..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023176.1	IVF0023176.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0045039	protein insertion into mitochondrial inner membrane
biological_process	GO:0071806	protein transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0042721	TIM22 mitochondrial import inner membrane insertion complex
molecular_function	GO:0030943	mitochondrion targeting sequence binding
molecular_function	GO:0008320	protein transmembrane transporter activity