IVF0023150 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTAACTTCTTATACTGCAGGTATGGAAGATTTCGCCCTTGGTGCTCCCCCCTTTCGAGGAAAGTGAAGGGTTGGCAAATGTTATGGTGGCATTATGCGCAACAATCTGTCTTGTTAGATGTACGAAAAAAATTAAAGAAATGTTCATGGAAATATCTTGGACAGAGACTGTAA ATGCCTAACTTCTTATACTGCAGGTATGGAAGATTTCGCCCTTGGTGCTCCCCCCTTTCGAGGAAAGTGAAGGGTTGGCAAATGTTATGGTGGCATTATGCGCAACAATCTGTCTTGTTAGATGTACGAAAAAAATTAAAGAAATGTTCATGGAAATATCTTGGACAGAGACTGTAA ATGCCTAACTTCTTATACTGCAGGTATGGAAGATTTCGCCCTTGGTGCTCCCCCCTTTCGAGGAAAGTGAAGGGTTGGCAAATGTTATGGTGGCATTATGCGCAACAATCTGTCTTGTTAGATGTACGAAAAAAATTAAAGAAATGTTCATGGAAATATCTTGGACAGAGACTGTAA MPNFLYCRYGRFRPWCSPLSRKVKGWQMLWWHYAQQSVLLDVRKKLKKCSWKYLGQRL Homology
BLAST of IVF0023150 vs. ExPASy Swiss-Prot
Match: Q55EI3 (Putative vacuolar protein sorting-associated protein 13E OS=Dictyostelium discoideum OX=44689 GN=vps13E PE=3 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 5.5e-04 Identity = 19/45 (42.22%), Postives = 28/45 (62.22%), Query Frame = 0
BLAST of IVF0023150 vs. ExPASy TrEMBL
Match: A0A0A0LXR7 (VPS13 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G653310 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 6.3e-27 Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 0
BLAST of IVF0023150 vs. ExPASy TrEMBL
Match: A0A5A7T5L4 (Putative vacuolar protein sorting-associated protein 13A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00620 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.5e-23 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of IVF0023150 vs. ExPASy TrEMBL
Match: A0A1S3B8J3 (putative vacuolar protein sorting-associated protein 13A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487212 PE=3 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.5e-23 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of IVF0023150 vs. ExPASy TrEMBL
Match: A0A1S4DUY4 (uncharacterized protein LOC103487212 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487212 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.5e-23 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of IVF0023150 vs. ExPASy TrEMBL
Match: A0A6J1JMV4 (uncharacterized protein LOC111485823 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485823 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 8.0e-22 Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of IVF0023150 vs. NCBI nr
Match: KAA0038223.1 (putative vacuolar protein sorting-associated protein 13A isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 117 bits (294), Expect = 3.28e-29 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of IVF0023150 vs. NCBI nr
Match: XP_016899794.1 (PREDICTED: uncharacterized protein LOC103487212 isoform X2 [Cucumis melo]) HSP 1 Score: 117 bits (294), Expect = 6.36e-29 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of IVF0023150 vs. NCBI nr
Match: XP_008443663.1 (PREDICTED: putative vacuolar protein sorting-associated protein 13A isoform X1 [Cucumis melo]) HSP 1 Score: 117 bits (294), Expect = 6.36e-29 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of IVF0023150 vs. NCBI nr
Match: XP_031736165.1 (uncharacterized protein LOC101204937 isoform X4 [Cucumis sativus]) HSP 1 Score: 114 bits (285), Expect = 1.05e-27 Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of IVF0023150 vs. NCBI nr
Match: XP_031736164.1 (uncharacterized protein LOC101204937 isoform X3 [Cucumis sativus]) HSP 1 Score: 113 bits (282), Expect = 2.66e-27 Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of IVF0023150 vs. TAIR 10
Match: AT5G24740.2 (Protein of unknown function (DUF1162) ) HSP 1 Score: 79.3 bits (194), Expect = 1.1e-15 Identity = 35/51 (68.63%), Postives = 40/51 (78.43%), Query Frame = 0
BLAST of IVF0023150 vs. TAIR 10
Match: AT5G24740.1 (Protein of unknown function (DUF1162) ) HSP 1 Score: 57.4 bits (137), Expect = 4.5e-09 Identity = 24/34 (70.59%), Postives = 26/34 (76.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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