IVF0023062 (gene) Melon (IVF77) v1

Overview


Name	IVF0023062
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ribonuclease
Location	chr07: 22342167 .. 22345438 (-)
RNA-Seq Expression	IVF0023062
Synteny	IVF0023062

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTACATGGCGGGAACGACCTAAAAGAAGAGAACACTCAATAGAAGAAACGCTCGAGTAAATTAGGCAGGAAGAGAATAGCTGATAAACTGCAATGTCTTTGCAAGATTCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAGGCTGGTCGTGGCCCTGTTTTAGGTTTTCTATTTTCCTATTCGTTTCATTTCATTTCTGTCTCTTTGACTTCGTTTCGATCATCATATTTTGGGATACTTTTCTTTCTGAAATATTAGTGCATTTGATCTCAGGTCCAATGGTGTATGGATGTTTGTACTGCGCCAGTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGGTTTGCAAAATTTATGCTTCTATCGATTTTCTTTTTGACTGCTAATTATCATTTCCTATTTCATTTACTTTTCCTCCATGCAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCCAATGAGTCAATTGGATGGGCCGTTGATGTCATTGATCCTCGAGAACTTTCCTCCAAGATGCTAAATAAGTCGGTCTAAATGGTTTATGAATTCTTTCATTTGCACAAACACTCTACTTTCCACTTGACCTTTTGAATTTGAGGGTAGAACTTAGCTGAATCTCTTTTTTCTTGACAAATGATATAATATAACAGTTGAATGTATGTATATATGTATATATATATATATATTTATTTATTTGTATTCACCACTAGACTCAAAAACTTAAGTTGACTTATTAAGAAGAAATCATTTCATTTCTAGTAATTCTTTAACCTAAGACAAGGAAACTTATCTTCATTCAGAGTTTGAGTCAGCAGAAGACTGAATGTGGATTATGATGCTCTCCCTCATTCTTCTAGTTTTGTTAATTTATGCACATCAAAGGGCACCTATGGCTTGCACTAAAGTTTTGTTTTTTCTCCTGCTACTTTATCAAGAAATATTACTTATAAAGGCCATGAAGTAAGATGCTATCATAATAATCATATGAGAATTATCACACTTGGTTTTTGTTTTCTGATTTCTTTTTCTTTTTTTTTTATTGGTCAACAGAGTAAAGATCAACCTAAATGAAATATCACATGGCTCTGCAATGGGTCTGGTCACCAAGGTTCTAAGCATGGGAGTTCTTTTAACCGAGGTAACTCTCTCCCTTGTTTCTTTATTGATTGATGAAAAGAAACTAAACTTGTTAAGAATACAGTCTTCCAATAGAGATAGAAGAGGAAACTAACTACGGAAGTTCAATAAATGGCCTCTAGTAACTTCCAATTATCTTACAATTGATATCATTTGGAGAGGAGATAGCATGTGGAATCTTGAACTTCATTTGTTATCACGCCATAACTTTTTTTGGGAGGGCAAAATATAAAATAAAAATTTCAAACTACAGATTTTTATTGTTTTGTTAATTATAGATCTAGACCAAAGTCAACGAGAAGGTGAAATGAACCAGTTTTATTTCTTGATTACAGTAGCATGGTGTGACACATCCTTATTAGGAAGATCTGTAAAAATTAAGTTTTGGAAGTTAAGTTCTTGATTTTTTTTCAAGTTCATGATATAGAGGGAAAGAAAATCCCCATTCAGCAAATCTCTTATTTATTTTCAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATCAAGTTGTCTGAAAAATTTCCCAATATAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTGTATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTAATGCTAATGCTTCCTTTTAAGATATAGCATTCTAACTGTTTCCCACACTTAAATTCATCAATGTGGCTTGTAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAATTTTGGTTCTGGATACCCTGGAGGTCTATTTCATATGCTAAATATTTTTTGCAGCATTATATAATCTGATTTTCGTTGCACAAGGTGATATCAATAATGCTCATATGATTTAATCTATATAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCTACACTAGTCCGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAGGACGTTGTTGAAGTATCATGGTTAGTTTTTACTCTGCCTTGTAAGAATTATAGCTCTTTGCAGAATTAGTTCATTAAGCCATCTTTTATGTTCTCCGCGGTATAGAAAGGACAGGCTTTCGTGGTGTACGTTCTCCTCTTTAATTTGTGATTATAACCTTACAACTCTGATAGCACATGGGAATTGTTTTTTAAACCATTTGGCATGTTTTGATATTTTGTAATTTTATCTTACCAACGAAATGAAGGATAATCCTTTTAATTAAAAGAAAAAAAAAGATGGATGAATTGCATACTTTTCAAAGATATTTTCCAGTAAGGCAGTGATATAGTTAAAAAAAAATCAGACTGCCGTGTTTCTAAAAATTGCTCAAGTATTCTTGTCCATATAGGAGTAGGTACATTGTGTTAAGTGCTTTAGTTTGTAGCGGTGGTATAGTTTTAATGAAAACAGTCTTAAAATATGATTGAATATCATATGAATTTTGGTAATTAATGGACAATTCTTTATTGGTGTATTGCACTTCGCATTGTTGCTGGAACGCCATCATGCGCTGATGCACTGAGATATTCAGTTCTTTCTCATTCTAAATTTTGATTTGATTTGTTCACTGGAAATGATGATTGTATCTTTATTCTAGCCTATAGTTGGTTTGGTGCACCCCACTTCTATTGTAGAATAGTTAGACAACAATTTGGGTTGGTTCCTGATGTCAACTTCTTGATACACTTTTATTGTTGAACTTTGTTATTAAGTTCTTTCGATTACACATTCACATTGATGTCATGTTGTTGTATTATTGTATTTATCTGCTTGATTTACAGGGAGTCGGATAAAGTGGATGAAGATGGTGCAACGGGTGGAAGTGGTAAGAAACAATTAAGATTAAGCAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCTCTCGTTTTTGAATCTTTGATTACATTCTTCAATTGTTAAAGATTAACTAAGTAGCTAATAACCAATAGTTTGGCTGTCTACCAGCTGGTTATTGTGCTTAGAAAACTCCTTTTTAATGATATGTAAC

mRNA sequence

CTTACATGGCGGGAACGACCTAAAAGAAGAGAACACTCAATAGAAGAAACGCTCGAGTAAATTAGGCAGGAAGAGAATAGCTGATAAACTGCAATGTCTTTGCAAGATTCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAGGCTGGTCGTGGCCCTGTTTTAGGTCCAATGGTGTATGGATGTTTGTACTGCGCCAGTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCCAATGAGTCAATTGGATGGGCCGTTGATGTCATTGATCCTCGAGAACTTTCCTCCAAGATGCTAAATAAAGTAAAGATCAACCTAAATGAAATATCACATGGCTCTGCAATGGGTCTGGTCACCAAGGTTCTAAGCATGGGAGTTCTTTTAACCGAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATCAAGTTGTCTGAAAAATTTCCCAATATAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTGTATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAATTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCTACACTAGTCCGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAGGACGTTGTTGAAGTATCATGGGAGTCGGATAAAGTGGATGAAGATGGTGCAACGGGTGGAAGTGGTAAGAAACAATTAAGATTAAGCAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCTCTCGTTTTTGAATCTTTGATTACATTCTTCAATTGTTAAAGATTAACTAAGTAGCTAATAACCAATAGTTTGGCTGTCTACCAGCTGGTTATTGTGCTTAGAAAACTCCTTTTTAATGATATGTAAC

Coding sequence (CDS)

ATGTCTTTGCAAGATTCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAGGCTGGTCGTGGCCCTGTTTTAGGTCCAATGGTGTATGGATGTTTGTACTGCGCCAGTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCCAATGAGTCAATTGGATGGGCCGTTGATGTCATTGATCCTCGAGAACTTTCCTCCAAGATGCTAAATAAAGTAAAGATCAACCTAAATGAAATATCACATGGCTCTGCAATGGGTCTGGTCACCAAGGTTCTAAGCATGGGAGTTCTTTTAACCGAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATCAAGTTGTCTGAAAAATTTCCCAATATAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTGTATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAATTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCTACACTAGTCCGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAGGACGTTGTTGAAGTATCATGGGAGTCGGATAAAGTGGATGAAGATGGTGCAACGGGTGGAAGTGGTAAGAAACAATTAAGATTAAGCAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCTCTCGTTTTTGA

Protein sequence

MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF

Homology

[Close]

BLAST of IVF0023062 vs. ExPASy Swiss-Prot
Match: Q9SEZ6 (Ribonuclease H2 subunit A OS=Arabidopsis thaliana OX=3702 GN=At2g25100 PE=2 SV=2)

HSP 1 Score: 443.4 bits (1139), Expect = 2.1e-123
Identity = 211/290 (72.76%), Postives = 254/290 (87.59%), Query Frame = 0


Query: 8   PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFE 67
           P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E
Sbjct: 8   PEWASQPCLMGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKEEKREELYE 67

Query: 68  DLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVLLTEVYVD 127
            LK ++S+GWAVDVIDPRELS+KML K K NLNEISH SAMGL+ +VL MGVLLTE Y+D
Sbjct: 68  SLKLDKSLGWAVDVIDPRELSAKMLAKNKTNLNEISHNSAMGLIKRVLDMGVLLTEAYLD 127

Query: 128 TVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAEN 187
           TVGDP+KYRIKLSE+FP+IKFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+
Sbjct: 128 TVGDPDKYRIKLSERFPSIKFVVSKKADSLFPIVSGASIVAKVTRDRALKEWLVEETGED 187

Query: 188 MHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDED 247
           ++RNFGSGYPGDP TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E 
Sbjct: 188 INRNFGSGYPGDPETKAWLVQHKHSVFGFPSLVRFSWGTCTTHLKGEVEVAWEADENEES 247

Query: 248 GATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 298
           G  G S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QL++F
Sbjct: 248 G-NGSSSKRQAKLSSFGFKTCEKRSEEIESSGKGRCKFLQARKIQQLTQF 296

[Close]

BLAST of IVF0023062 vs. ExPASy Swiss-Prot
Match: Q5U209 (Ribonuclease H2 subunit A OS=Rattus norvegicus OX=10116 GN=Rnaseh2a PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.2e-65
Identity = 118/237 (49.79%), Postives = 161/237 (67.93%), Query Frame = 0


Query: 13  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN 72
           +PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE LF  ++ +
Sbjct: 27  EPCVLGVDEAGRGPVLGPMVYAICYCPLSRLADLEALKVADSKTLTENERERLFAKMEED 86

Query: 73  -ESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVLLTEVYVDTVGD 132
            + +GWA+D++ P  +S+ ML +VK NLN +SH +A GL+   +   V +T+V+VDTVG 
Sbjct: 87  GDFVGWALDILSPNLISTSMLGRVKYNLNSMSHDTAAGLIQHAMDQNVKVTQVFVDTVGM 146

Query: 133 PEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRN 192
           PE Y+ +L ++FP I+  V  KADSL+PVVS ASI+AKV RD+A++ W   E+ + +  +
Sbjct: 147 PETYQARLQQRFPGIEVTVKAKADSLFPVVSAASIIAKVARDQAVKNWQFVESLQGLDSD 206

Query: 193 FGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDVVEVSWESDKVDED 248
           +GSGYP DP TK WL  H   VFGFP  VRFSW T  +   K+   V+WE    +ED
Sbjct: 207 YGSGYPNDPKTKAWLRKHVDPVFGFPQFVRFSWSTAQAILEKEAESVTWEDSAAEED 263

[Close]

BLAST of IVF0023062 vs. ExPASy Swiss-Prot
Match: O75792 (Ribonuclease H2 subunit A OS=Homo sapiens OX=9606 GN=RNASEH2A PE=1 SV=2)

HSP 1 Score: 250.8 bits (639), Expect = 2.0e-65
Identity = 119/229 (51.97%), Postives = 158/229 (69.00%), Query Frame = 0


Query: 13  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN 72
           +PCV+G+DEAGRGPVLGPMVY   YC    L +L +L  ADSKTL E +RE LF  ++  
Sbjct: 27  EPCVLGVDEAGRGPVLGPMVYAICYCPLPRLADLEALKVADSKTLLESERERLFAKMEDT 86

Query: 73  ESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVLLTEVYVDTVGDP 132
           + +GWA+DV+ P  +S+ ML +VK NLN +SH +A GL+   L  GV +T+V+VDTVG P
Sbjct: 87  DFVGWALDVLSPNLISTSMLGRVKYNLNSLSHDTATGLIQYALDQGVNVTQVFVDTVGMP 146

Query: 133 EKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF 192
           E Y+ +L + FP I+  V  KAD+LYPVVS ASI AKV RD+A+++W   E  +++  ++
Sbjct: 147 ETYQARLQQSFPGIEVTVKAKADALYPVVSAASICAKVARDQAVKKWQFVEKLQDLDTDY 206

Query: 193 GSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTC-TSYFKDVVEVSWE 241
           GSGYP DP TK WL++H   VFGFP  VRFSW T  T   K+  +V WE
Sbjct: 207 GSGYPNDPKTKAWLKEHVEPVFGFPQFVRFSWRTAQTILEKEAEDVIWE 255

[Close]

BLAST of IVF0023062 vs. ExPASy Swiss-Prot
Match: Q9CWY8 (Ribonuclease H2 subunit A OS=Mus musculus OX=10090 GN=Rnaseh2a PE=1 SV=2)

HSP 1 Score: 250.4 bits (638), Expect = 2.6e-65
Identity = 120/237 (50.63%), Postives = 160/237 (67.51%), Query Frame = 0


Query: 13  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN 72
           +PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE LF  ++ +
Sbjct: 27  EPCVLGVDEAGRGPVLGPMVYAICYCPLSRLADLEALKVADSKTLTENERERLFAKMEED 86

Query: 73  -ESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVLLTEVYVDTVGD 132
            + +GWA+DV+ P  +S+ ML +VK NLN +SH +A GL+   L   V +T+V+VDTVG 
Sbjct: 87  GDFVGWALDVLSPNLISTSMLGRVKYNLNSLSHDTAAGLIQYALDQNVNVTQVFVDTVGM 146

Query: 133 PEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRN 192
           PE Y+ +L + FP I+  V  KADSL+PVVS ASI AKV RD+A++ W   E  +++  +
Sbjct: 147 PETYQARLQQHFPGIEVTVKAKADSLFPVVSAASIFAKVARDKAVKNWQFVENLQDLDSD 206

Query: 193 FGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDVVEVSWESDKVDED 248
           +GSGYP DP TK WL  H   VFGFP  VRFSW T  +   K+  +V WE  + +ED
Sbjct: 207 YGSGYPNDPKTKAWLRKHVDPVFGFPQFVRFSWSTAQAILEKEAEDVIWEDSEAEED 263

[Close]

BLAST of IVF0023062 vs. ExPASy Swiss-Prot
Match: Q2TBT5 (Ribonuclease H2 subunit A OS=Bos taurus OX=9913 GN=RNASEH2A PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.2e-64
Identity = 125/250 (50.00%), Postives = 163/250 (65.20%), Query Frame = 0


Query: 8   PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFE 67
           P    +PCV+G+DEAGRGPVLGPMVY   YC  S L++L +L  ADSKTL E +R+ LF 
Sbjct: 22  PVCLKEPCVLGVDEAGRGPVLGPMVYAICYCPLSRLEDLEALKVADSKTLSESERDRLFA 81

Query: 68  DLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVLLTEVYV 127
            ++ + + +GWA+DV+ P  +S+ ML +VK NLN +SH +A GLV   L  GV + +V+V
Sbjct: 82  KMEEDGDFVGWALDVLSPNLISTSMLGRVKYNLNALSHDTATGLVQFALDQGVNVAQVFV 141

Query: 128 DTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAE 187
           DTVG PE Y+ +L ++FP I+  V  KAD+LYPVVS ASI AKV RD+A++ W   E  +
Sbjct: 142 DTVGLPETYQERLQQRFPGIEVTVKAKADALYPVVSAASICAKVARDQAVKNWKFVEKLQ 201

Query: 188 NMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVE-VSWESDKVD 247
           ++  ++GSGYP DP TK WL  H   VFGFP  VRFSW T  S  +   E V WE     
Sbjct: 202 DLDTDYGSGYPNDPKTKAWLRKHVDPVFGFPQFVRFSWRTAQSILESEAEDVKWED---S 261

Query: 248 EDGATGGSGK 256
           E G   G GK
Sbjct: 262 ETGDPKGPGK 268

[Close]

BLAST of IVF0023062 vs. ExPASy TrEMBL
Match: A0A5A7TT92 (Ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001310 PE=3 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 5.5e-167
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60
           MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE
Sbjct: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120
           KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL
Sbjct: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240

Query: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 298
           SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 297

[Close]

BLAST of IVF0023062 vs. ExPASy TrEMBL
Match: A0A1S3BXP1 (Ribonuclease OS=Cucumis melo OX=3656 GN=LOC103494542 PE=3 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 5.5e-167
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60
           MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE
Sbjct: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120
           KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL
Sbjct: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240

Query: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 298
           SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 297

[Close]

BLAST of IVF0023062 vs. ExPASy TrEMBL
Match: A0A0A0KTZ4 (Ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_4G015800 PE=3 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.3e-163
Identity = 291/297 (97.98%), Postives = 293/297 (98.65%), Query Frame = 0


Query: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60
           MS QDSLPKW SKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLK+LSSLNFADSKTLKEE
Sbjct: 1   MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKQLSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120
           KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISH SAMGLVTKVLSMGVL
Sbjct: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLSMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240

Query: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 298
           SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIES+ KGRCKFFQARKLEQLSRF
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF 297

[Close]

BLAST of IVF0023062 vs. ExPASy TrEMBL
Match: A0A6J1IPY0 (Ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111479443 PE=3 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 8.4e-160
Identity = 282/297 (94.95%), Postives = 288/297 (96.97%), Query Frame = 0


Query: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60
           MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120
           KREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLNEISH SAMGLVTKVL MGVL
Sbjct: 61  KREELFEGLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPN+KFVV+KKADSLYPVVSGASIVAKVTRDR LR+WA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVSKKADSLYPVVSGASIVAKVTRDRVLRDWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFP+LVRFSWGTCTSYFKD+VEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPSLVRFSWGTCTSYFKDIVEVSWE 240

Query: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 298
           SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL+ F
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF 297

[Close]

BLAST of IVF0023062 vs. ExPASy TrEMBL
Match: A0A6J1GTR5 (Ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111457459 PE=3 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.4e-159
Identity = 282/297 (94.95%), Postives = 286/297 (96.30%), Query Frame = 0


Query: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60
           MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSK LKEE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120
           KREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLNEISH SAMGLVTKVL MGVL
Sbjct: 61  KREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWE 240

Query: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 298
           SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL+ F
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF 297

[Close]

BLAST of IVF0023062 vs. NCBI nr
Match: XP_008453982.1 (PREDICTED: ribonuclease H2 subunit A isoform X1 [Cucumis melo] >KAA0044595.1 ribonuclease H2 subunit A isoform X1 [Cucumis melo var. makuwa] >TYK16989.1 ribonuclease H2 subunit A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 595 bits (1534), Expect = 1.64e-214
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60
           MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE
Sbjct: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120
           KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL
Sbjct: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240

Query: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 297
           SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 297

[Close]

BLAST of IVF0023062 vs. NCBI nr
Match: XP_004152096.1 (ribonuclease H2 subunit A [Cucumis sativus] >KGN53090.1 hypothetical protein Csa_014407 [Cucumis sativus])

HSP 1 Score: 584 bits (1505), Expect = 4.34e-210
Identity = 291/297 (97.98%), Postives = 293/297 (98.65%), Query Frame = 0


Query: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60
           MS QDSLPKW SKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLK+LSSLNFADSKTLKEE
Sbjct: 1   MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKQLSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120
           KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISH SAMGLVTKVLSMGVL
Sbjct: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLSMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240

Query: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 297
           SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIES+ KGRCKFFQARKLEQLSRF
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF 297

[Close]

BLAST of IVF0023062 vs. NCBI nr
Match: XP_023527419.1 (ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 574 bits (1479), Expect = 3.99e-206
Identity = 284/297 (95.62%), Postives = 288/297 (96.97%), Query Frame = 0


Query: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60
           MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120
           KREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLNEISH SAMGLVTKVL MGVL
Sbjct: 61  KREELFEGLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWE 240

Query: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 297
           SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL+ F
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF 297

[Close]

BLAST of IVF0023062 vs. NCBI nr
Match: KAG6582048.1 (Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 573 bits (1476), Expect = 1.14e-205
Identity = 283/297 (95.29%), Postives = 288/297 (96.97%), Query Frame = 0


Query: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60
           MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120
           KREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLNEISH SAMGLVTKVL MGVL
Sbjct: 61  KREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWE 240

Query: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 297
           SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL++F
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTQF 297

[Close]

BLAST of IVF0023062 vs. NCBI nr
Match: XP_022979887.1 (ribonuclease H2 subunit A [Cucurbita maxima])

HSP 1 Score: 571 bits (1472), Expect = 4.65e-205
Identity = 282/297 (94.95%), Postives = 288/297 (96.97%), Query Frame = 0


Query: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60
           MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120
           KREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLNEISH SAMGLVTKVL MGVL
Sbjct: 61  KREELFEGLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPN+KFVV+KKADSLYPVVSGASIVAKVTRDR LR+WA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVSKKADSLYPVVSGASIVAKVTRDRVLRDWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFP+LVRFSWGTCTSYFKD+VEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPSLVRFSWGTCTSYFKDIVEVSWE 240

Query: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 297
           SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL+ F
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF 297

[Close]

BLAST of IVF0023062 vs. TAIR 10
Match: AT2G25100.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 443.4 bits (1139), Expect = 1.5e-124
Identity = 211/290 (72.76%), Postives = 254/290 (87.59%), Query Frame = 0


Query: 8   PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFE 67
           P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E
Sbjct: 8   PEWASQPCLMGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKEEKREELYE 67

Query: 68  DLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVLLTEVYVD 127
            LK ++S+GWAVDVIDPRELS+KML K K NLNEISH SAMGL+ +VL MGVLLTE Y+D
Sbjct: 68  SLKLDKSLGWAVDVIDPRELSAKMLAKNKTNLNEISHNSAMGLIKRVLDMGVLLTEAYLD 127

Query: 128 TVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAEN 187
           TVGDP+KYRIKLSE+FP+IKFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+
Sbjct: 128 TVGDPDKYRIKLSERFPSIKFVVSKKADSLFPIVSGASIVAKVTRDRALKEWLVEETGED 187

Query: 188 MHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDED 247
           ++RNFGSGYPGDP TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E 
Sbjct: 188 INRNFGSGYPGDPETKAWLVQHKHSVFGFPSLVRFSWGTCTTHLKGEVEVAWEADENEES 247

Query: 248 GATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 298
           G  G S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QL++F
Sbjct: 248 G-NGSSSKRQAKLSSFGFKTCEKRSEEIESSGKGRCKFLQARKIQQLTQF 296

[Close]

BLAST of IVF0023062 vs. TAIR 10
Match: AT2G25100.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 407.9 bits (1047), Expect = 6.9e-114
Identity = 198/290 (68.28%), Postives = 239/290 (82.41%), Query Frame = 0


Query: 8   PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFE 67
           P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E
Sbjct: 8   PEWASQPCLMGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKEEKREELYE 67

Query: 68  DLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVLLTEVYVD 127
            LK ++S+GWAVDVIDPRELS+KML                    KVL MGVLLTE Y+D
Sbjct: 68  SLKLDKSLGWAVDVIDPRELSAKML-------------------AKVLDMGVLLTEAYLD 127

Query: 128 TVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAEN 187
           TVGDP+KYRIKLSE+FP+IKFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+
Sbjct: 128 TVGDPDKYRIKLSERFPSIKFVVSKKADSLFPIVSGASIVAKVTRDRALKEWLVEETGED 187

Query: 188 MHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDED 247
           ++RNFGSGYPGDP TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E 
Sbjct: 188 INRNFGSGYPGDPETKAWLVQHKHSVFGFPSLVRFSWGTCTTHLKGEVEVAWEADENEES 247

Query: 248 GATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 298
           G  G S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QL++F
Sbjct: 248 G-NGSSSKRQAKLSSFGFKTCEKRSEEIESSGKGRCKFLQARKIQQLTQF 277

The following BLAST results are available for this feature:

BLAST of IVF0023062 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEZ6	2.1e-123	72.76	Ribonuclease H2 subunit A OS=Arabidopsis thaliana OX=3702 GN=At2g25100 PE=2 SV=2	[more]
Q5U209	1.2e-65	49.79	Ribonuclease H2 subunit A OS=Rattus norvegicus OX=10116 GN=Rnaseh2a PE=2 SV=1	[more]
O75792	2.0e-65	51.97	Ribonuclease H2 subunit A OS=Homo sapiens OX=9606 GN=RNASEH2A PE=1 SV=2	[more]
Q9CWY8	2.6e-65	50.63	Ribonuclease H2 subunit A OS=Mus musculus OX=10090 GN=Rnaseh2a PE=1 SV=2	[more]
Q2TBT5	2.2e-64	50.00	Ribonuclease H2 subunit A OS=Bos taurus OX=9913 GN=RNASEH2A PE=1 SV=1	[more]

BLAST of IVF0023062 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TT92	5.5e-167	100.00	Ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001310 ...	[more]
A0A1S3BXP1	5.5e-167	100.00	Ribonuclease OS=Cucumis melo OX=3656 GN=LOC103494542 PE=3 SV=1	[more]
A0A0A0KTZ4	1.3e-163	97.98	Ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_4G015800 PE=3 SV=1	[more]
A0A6J1IPY0	8.4e-160	94.95	Ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111479443 PE=3 SV=1	[more]
A0A6J1GTR5	1.4e-159	94.95	Ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111457459 PE=3 SV=1	[more]

BLAST of IVF0023062 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453982.1	1.64e-214	100.00	PREDICTED: ribonuclease H2 subunit A isoform X1 [Cucumis melo] >KAA0044595.1 rib...	[more]
XP_004152096.1	4.34e-210	97.98	ribonuclease H2 subunit A [Cucumis sativus] >KGN53090.1 hypothetical protein Csa...	[more]
XP_023527419.1	3.99e-206	95.62	ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo]	[more]
KAG6582048.1	1.14e-205	95.29	Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022979887.1	4.65e-205	94.95	ribonuclease H2 subunit A [Cucurbita maxima]	[more]

BLAST of IVF0023062 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25100.1	1.5e-124	72.76	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G25100.2	6.9e-114	68.28	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..186 e-value: 1.8E-67 score: 228.9
IPR004649	Ribonuclease H2, subunit A	TIGRFAM	TIGR00729	TIGR00729	coord: 16..228 e-value: 1.8E-54 score: 182.9
IPR023160	Ribonuclease HII, helix-loop-helix cap domain superfamily	GENE3D	1.10.10.460	Ribonuclease hii. Domain 2	coord: 187..234 e-value: 7.0E-20 score: 72.4
IPR024567	Ribonuclease HII/HIII domain	PFAM	PF01351	RNase_HII	coord: 17..227 e-value: 1.1E-51 score: 175.5
None	No IPR available	PANTHER	PTHR10954:SF19	RIBONUCLEASE	coord: 6..297
None	No IPR available	CDD	cd07181	RNase_HII_eukaryota_like	coord: 17..233 e-value: 3.8244E-141 score: 394.963
IPR001352	Ribonuclease HII/HIII	PANTHER	PTHR10954	RIBONUCLEASE H2 SUBUNIT A	coord: 6..297
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 15..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023062.4	IVF0023062.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043137	DNA replication, removal of RNA primer
biological_process	GO:0006298	mismatch repair
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0016070	RNA metabolic process
cellular_component	GO:0032299	ribonuclease H2 complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003676	nucleic acid binding