IVF0023054 (gene) Melon (IVF77) v1

Overview


Name	IVF0023054
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein CutA
Location	chr03: 24714361 .. 24718558 (-)
RNA-Seq Expression	IVF0023054
Synteny	IVF0023054

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAAGTGAAGGCTTCAAGTAAAGCTCAAGACGGGGCGTCGAAAAGGCGCGACACGAAAATAGCGCTATAAAAACAGAAAATGGCTTTCACTCTTAGCAGCAGAGCCGCGACACCATTGATATCGTGCTTTGCACTACGTCGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTAAGCTTCGGAATCTCCAATCTCTTCGTCTCCAAAACGGGTTCTGCTCTGTCTGTGCCTTTCGTCCCTCTCTTGAGGTACTTCTTTTCGCTTCCTTGCTTTCTTTCTTCATCAATTTATTCAACGATTGTTTCTTTCTTTGATTTTTCTTTAGTCGTTGGTTAATTTGTTTAGTTTAATTGTTTAATCCGTGTTTTTGTTGGTTTGCTAATGGAAAATGAATGTCAGATCGAAGCTTGCTGGTCAAGGTCCAGCTAGGAACGTACATTTGATAAAAATGGAAGGGAGTAGTGCTGCGGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAACAGGGAAGCAGGTTCTCTTTGATCTCTATGCTCTAGAAATCTCGCGTGATTTGTTGTTCTGAATTCATTGATCATTCTTTGGTATTTTGTGTTATGGAGTATGGACCAACTATAATCGGATTAGAATAGGATAGTTTTAGTAGCTGTTAGTCAATCAAGTGACCAACAAATCAGGCTCTTCTAGCAGCGGTATATAAGCTGTAGTTGATGGTAACACGGTGGTACGTTGATCAAATAGCATGGGGAATTGGGTATTGACGATATAGTTTCACTATTTTACTTGTTATGCTAGTCACATCTTCACTGTAAGGAGAGTTTTTGGGGGAATCTTATGTTGGCTACTGATGGTGTTGATTATTGAGTATTGATAGGATCTTGTTGATTATGAGTTGGATATATATACTTGGCGCATTGGGCAAATAATTATCAGACTCAATAAGCAAATGATGGATTATATTATAACTCGAGAAATGCACTGATGTTAATTATATATACTATTGTTGAAAATGTAGCATGTTTTTCTATCAAAAAGGATAAAAAGAACAAAAAATGTGAAGCATGTTTTGGCTTCTGCTGCGTCAAAGAATGCTTATCATGTTCACTTGGATGATTAATGCTCAGAGATAGTAAGGTCTCTTGGTATTCAATGTGGATTATGTTTTATGTTTTCTAATTCACTAAGTTAAATAGATTCTATGAAGATTTGTTTGACATACATGTATATATATTTAAATTGTTTTTGGATTTGTGATCCAAATAGTGGAAATTCTAAAATCTTATGTAATTCAGATTTTAAATTTGAAGTTTTAAAATGGAATTGATATTGAAAAAGAGAATTAAGGTTTAAGTAAATATAGATTTTACGTTCTAAACTCATATATATACTTTTTAAAGTTAAATGGTGTATGACACAATATATTTTTAATTTCTATCTTATTGTAAAATAAAATTTATTCAAAATTGTTGACATAAAACATATTCATAACTTAATTAGTAATAATTGTGTTTTGAGCTAATATTTAGTTTGTAACTACCTGCAACTATTTTTAGAATTATAAATATATTATCAAACTAAGTCTGTACTAATTTTTAAATGAGATCGAACTGCTAAACTAAATACATAATAAAAAATATTGAGAACGTCTACAAAACCTGTTTTGATTGAATTTTTTGTTTTTAGACCATGCACCACCAAACACGCACTAGGAATTCGAAAAGTCACCCGAGAGTGCAAAGTTAATTTTAAATGCATTTTCTACCCCGTAAAAGAAACAAAACAAGAATGACGAATTTGTAAGCATTTTTGGGCGGCATAGTTCCATTATCGTTATTTTTTAGTTTTGTTATTTTAGTCATGTATTCAATCCATAGTGGTTACCTACCTAGAAACTAGTTTCCTACCAGATTCCTTGACACCCAAATGTTGTAGGACCAAGCGAGTTGTCAGGTGAGATTAGTCGAAGTGCCCGTAAGGTAGCCCAAACACTCACATATATAAAAAAAATTCAACTTCTTTGTTCCGCTTTTATCTATGGTAACAGAACTAGTCCGATCCAATGTTTGGTATTCCAATTGCATTAAGTTACCATGTTTTCTCTGTTGTCTCCACGTACATCTTTATACATTTTATATAGTAAATGACATATCTAACCATGTACTTACTAGCAAGAATTGGATTGATTTTGCCCAAGCTAAATTGTATTGTGTTTCTCAGGACCGAGCACTGAATTTCTTACTATGTGATTTACTTCTCTTTAGTGGACGTATGTTTATTATCTTTCTCGTTCACATTATTTCTGCAGGTAAGAAACTAGCTGAAAGCATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATAGTACCCGGTATGTGGGTCTTCTCAACCTCTGCACGTCATCTTAAGTGACAAAAGGCATTGCTCATGGTTTAGAAAAAATATTATGTCGACAAGATTTATAATCCACGCTTGCCGAACATCTGGTATTCTCCTTTAAGTTTTCCTTGCATATCAATGAAGTTGCTTCTAAGTTCTAACTTTTAATATTTAAGATTGAAGCTTACTGGATCTTCCCTGTAATATTTCAGTGGCATTTTTTAGTGAAGGAATCTTGTGGAAATAGTTTACTTTCATCTTGTTGTGAAACAAAATTCCTTTTCTTTTGATCGGTTCTCTTTAGATCTTGTGATTTCATAAAGAAACGCGATGCTTCAAGTTGTTCCACAGCCCTTTTTAATCTTTCAATTTTTTTCAGTTGCCAACCATTGAGTTCTTATTCTTTTAGAGATTGCTTTTCATTTCGTTGCAACCGCTAATGTGAATATGAATTGTTAGACTTCTACTGAATACTTTATAAATGCAGGTATAGAATCTATTTATCAGTGGAAGGGAGAGGTAAGGTTCCGATTTTCAAACATTCATGTATAGTTATCAAGTAGGTGATTTTTGTTTGTCTTTACGAACAAAAAGAACTTAACTGTAGGCTTTCTGTTTCTGGTTGACACAGATTCAGACGGACCCTGAGGAACTTCTGATCATTAAGACTAGGCAATCACTTCTGGGAGCACTGACAGATCATGTTAAGGCAAATCACCCATACGAGTAAGCTTAACATTCATTTTTTTTTTTCCATCCTTCATGTTTGTTGGGTTTTGGGCTCGTGTGTGTTTGTTTTTTTAAAATTATTTTCAATATTGGGGGAACAATGAAGCGGACGGGCAAATAGAGTTGTGAATTGTGAACTGCTTTGCTTATCAGCCAGATACTTGTTTTATGGATAATATTCTTTATTTTTTTTACCTACATTCATTTGCCTTTCTTTTTCCTATTTACTCGTATATTTCAGGGATTTTATTTTATTTTATTTTAAATTTATACCAATCTTAGCTAAAACTTGAAACCAGAGGAAAATAGTTTTTAGGACTTTATTTTTTATCATTGAAATTAGACTAAAGCTATAGTATCGTTAACGAGTGAAAAACCAAACGAAGAGATGGGCATGAGTAGCGGAAAACCAAACAAAAAGAAAAAAAAACTAACAAGATCTCTCATCTCAGTTATCGGTTTTTCAATGGAGAGTTGGGAAGATGTTTTAAAAAGCCAAATTTTATCCCCTCCAAGGATTTACCTTCATTTTTGACACAGGGTGCCTGAAGTTATTGCTTTGCCAATCAATGGTGGCAGCCTAGAGTACCTAGAGTGGATCAAGAGCAGCACGAAGGACTGACTTTCTATGTGTTAACAAGTTTATTCGAGTATATCAAGTATTCTGTTTAATTTGTTATATGTACCCCTTCCCCACCTTTACGTACAAATGTCTCAATAAACTTGATGTTTTGTAAATAAGAGTTGAAATTTGGTTTCCAAATTGATCTTTTGTGCTTCAATCTCCCTTGCATTGGGTTTGTCAATGACTCATTTCCTAAACTTACAGCAAATATGCATTGGCAAAATACATGGGGGGAAAACTGCGGGAGTTCTTGACTTTGTACGAGGTCAGAGATCTCAACCCCATAACTTCTCATTGCTTCGCATTTGATGATGATTTCCACGAAATTGTTGGTCGAATGCCTTCCTATACTGTCTTACAAAGAGCTCCACTTGGTGAAGACTTGTATTTGAACATTTGAGATGAAAATGTATAGAACTGTATATATGTTGGTTTCTTTCTCTGTTTTCAAAAGACTTCGCAACA

mRNA sequence

CGAAAGTGAAGGCTTCAAGTAAAGCTCAAGACGGGGCGTCGAAAAGGCGCGACACGAAAATAGCGCTATAAAAACAGAAAATGGCTTTCACTCTTAGCAGCAGAGCCGCGACACCATTGATATCGTGCTTTGCACTACGTCGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTAAGCTTCGGAATCTCCAATCTCTTCGTCTCCAAAACGGGTTCTGCTCTGTCTGTGCCTTTCGTCCCTCTCTTGAGATCGAAGCTTGCTGGTCAAGGTCCAGCTAGGAACGTACATTTGATAAAAATGGAAGGGAGTAGTGCTGCGGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAACAGGGAAGCAGGTAAGAAACTAGCTGAAAGCATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATAGTACCCGGTATAGAATCTATTTATCAGTGGAAGGGAGAGATTCAGACGGACCCTGAGGAACTTCTGATCATTAAGACTAGGCAATCACTTCTGGGAGCACTGACAGATCATGTTAAGGCAAATCACCCATACGAGGTGCCTGAAGTTATTGCTTTGCCAATCAATGGTGGCAGCCTAGAGTACCTAGAGTGGATCAAGAGCAGCACGAAGGACTGACTTTCTATGTGTTAACAAGTTTATTCGAGTATATCAAGTATTCTGTTTAATTTGTTATATGTACCCCTTCCCCACCTTTACGTACAAATGTCTCAATAAACTTGATGTTTTGTAAATAAGAGTTGAAATTTGGTTTCCAAATTGATCTTTTGTGCTTCAATCTCCCTTGCATTGGGTTTGTCAATGACTCATTTCCTAAACTTACAGCAAATATGCATTGGCAAAATACATGGGGGGAAAACTGCGGGAGTTCTTGACTTTGTACGAGGTCAGAGATCTCAACCCCATAACTTCTCATTGCTTCGCATTTGATGATGATTTCCACGAAATTGTTGGTCGAATGCCTTCCTATACTGTCTTACAAAGAGCTCCACTTGGTGAAGACTTGTATTTGAACATTTGAGATGAAAATGTATAGAACTGTATATATGTTGGTTTCTTTCTCTGTTTTCAAAAGACTTCGCAACA

Coding sequence (CDS)

ATGGCTTTCACTCTTAGCAGCAGAGCCGCGACACCATTGATATCGTGCTTTGCACTACGTCGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTAAGCTTCGGAATCTCCAATCTCTTCGTCTCCAAAACGGGTTCTGCTCTGTCTGTGCCTTTCGTCCCTCTCTTGAGATCGAAGCTTGCTGGTCAAGGTCCAGCTAGGAACGTACATTTGATAAAAATGGAAGGGAGTAGTGCTGCGGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAACAGGGAAGCAGGTAAGAAACTAGCTGAAAGCATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATAGTACCCGGTATAGAATCTATTTATCAGTGGAAGGGAGAGATTCAGACGGACCCTGAGGAACTTCTGATCATTAAGACTAGGCAATCACTTCTGGGAGCACTGACAGATCATGTTAAGGCAAATCACCCATACGAGGTGCCTGAAGTTATTGCTTTGCCAATCAATGGTGGCAGCCTAGAGTACCTAGAGTGGATCAAGAGCAGCACGAAGGACTGA

Protein sequence

MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKLAGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESIYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSSTKD

Homology

[Close]

BLAST of IVF0023054 vs. ExPASy Swiss-Prot
Match: P93009 (Protein CutA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CUTA PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-54
Identity = 117/185 (63.24%), Postives = 142/185 (76.76%), Query Frame = 0


Query: 5   LSSRAATPLISCFALRRRLPLVGAFCVLS-FGISNLFVS---KTGSALSVPFVPLLRSKL 64
           ++S   T L +    RR  P+VGAFCVLS   IS+L  S   K+G A S   VPLLRSK 
Sbjct: 1   MASSLTTRLSAVIGSRRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKF 60

Query: 65  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 124
           + +  + +   I+ME SS  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIVPGIES
Sbjct: 61  SSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIES 120

Query: 125 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 184
           +Y+W+G++Q+D EELLIIKTRQSLL  LT+HV ANH Y+VPEVIALPI GGS +YLEW+K
Sbjct: 121 VYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYDVPEVIALPITGGSDKYLEWLK 180

Query: 185 SSTKD 186
           +ST++
Sbjct: 181 NSTRN 182

[Close]

BLAST of IVF0023054 vs. ExPASy Swiss-Prot
Match: Q109R6 (Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CUTA1 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 9.9e-47
Identity = 101/177 (57.06%), Postives = 123/177 (69.49%), Query Frame = 0


Query: 9   AATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKLAGQGPARN 68
           AA   +S   LRRR P+ GA   LS G      S + SA +                   
Sbjct: 23  AAAAGLSPLLLRRRAPIAGALLFLSLGAFAGVRSLSSSASA------------------- 82

Query: 69  VHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESIYQWKGEI 128
               +ME +S  VPSIVVYVTVPN+EAGK+LA SI+ EKLAACVNIVPGIES+Y W+G++
Sbjct: 83  ----RMESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVNIVPGIESVYWWEGKV 142

Query: 129 QTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSSTKD 186
           QTD EELLIIKTR+SLL ALT+HVKANH Y+VPEVIALPI GG+L+YLEW+K+ST++
Sbjct: 143 QTDAEELLIIKTRESLLDALTEHVKANHEYDVPEVIALPIKGGNLKYLEWLKNSTRE 176

[Close]

BLAST of IVF0023054 vs. ExPASy Swiss-Prot
Match: O60888 (Protein CutA OS=Homo sapiens OX=9606 GN=CUTA PE=1 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 1.9e-26
Identity = 63/161 (39.13%), Postives = 98/161 (60.87%), Query Frame = 0


Query: 31  VLSFGISNLFVSKTGSALSVP------FVPLLRSKLAGQGPARNVHLIKMEGSSAAVPSI 90
           VL  G+++L +S       +P       +P +   +A   P          GS     S+
Sbjct: 9   VLLGGVASLLLSFVWMPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSV 68

Query: 91  -VVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESIYQWKGEIQTDPEELLIIKTRQS 150
              +VT PN +  K++A ++V+++LAACVN++P I SIY+WKG+I+ D E L++IKT+ S
Sbjct: 69  SAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSS 128

Query: 151 LLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSSTK 185
           L+ ALTD V++ HPYEV EVIALP+  G+  YL+W++  T+
Sbjct: 129 LVPALTDFVRSVHPYEVAEVIALPVEQGNFPYLQWVRQVTE 169

[Close]

BLAST of IVF0023054 vs. ExPASy Swiss-Prot
Match: Q7SIA8 (Divalent-cation tolerance protein CutA OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=cutA PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-25
Identity = 51/99 (51.52%), Postives = 74/99 (74.75%), Query Frame = 0


Query: 85  VVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESIYQWKGEIQTDPEELLIIKTRQSL 144
           VV +TVP+ E  + +A+++V+E+LAACVNIVPG+ SIY+W+GE+  D E LL++KT    
Sbjct: 4   VVLITVPSEEVARTIAKALVEERLAACVNIVPGLTSIYRWQGEVVEDQELLLLVKTTTHA 63

Query: 145 LGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSST 184
              L + VKA HPY VPE++ALPI  G+ EYL+W++ +T
Sbjct: 64  FPKLKERVKALHPYTVPEIVALPIAEGNREYLDWLRENT 102

[Close]

BLAST of IVF0023054 vs. ExPASy Swiss-Prot
Match: P69678 (Protein CutA OS=Bos taurus OX=9913 GN=CUTA PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.6e-25
Identity = 61/131 (46.56%), Postives = 88/131 (67.18%), Query Frame = 0


Query: 56  LRSKLAGQGPARNVHLIKMEGSSAAVPSIV--VYVTVPNREAGKKLAESIVKEKLAACVN 115
           L S  +G  PA+          SA VP  V   +VT PN +  K++A ++V+++L ACVN
Sbjct: 41  LLSMASGSPPAQP----SSSSRSAYVPGSVSAAFVTCPNEKVAKEIARAVVEKRL-ACVN 100

Query: 116 IVPGIESIYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL 175
           +VP I SIY+WKG+I+ D E L++IKT+ SL+ ALTD V++ HPYEV EVIALP+  G+ 
Sbjct: 101 LVPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPYEVAEVIALPVEQGNS 160

Query: 176 EYLEWIKSSTK 185
            YL+W++  T+
Sbjct: 161 PYLQWVRQVTE 166

[Close]

BLAST of IVF0023054 vs. ExPASy TrEMBL
Match: A0A1S3BBF3 (protein CutA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488107 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.4e-96
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60
           MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of IVF0023054 vs. ExPASy TrEMBL
Match: A0A5A7VD29 (Protein CutA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004450 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 5.9e-95
Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60
           MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALS+PFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKA HPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKAIHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of IVF0023054 vs. ExPASy TrEMBL
Match: A0A0A0LRU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370360 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.5e-94
Identity = 180/185 (97.30%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60
           MAFTLSSRAATPLI+ FALRRRLPLVGAFCVLSFGISNLFVSKTGSALS+PFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLITSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           +YQWKGEIQ+DPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of IVF0023054 vs. ExPASy TrEMBL
Match: A0A6J1K4I7 (protein CutA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492224 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.3e-86
Identity = 167/185 (90.27%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60
           MAFTL SR ATPL+S   LRRRLPLVGAFCVLSFG SNLFVS+TGSALS+PF PLLRS  
Sbjct: 1   MAFTLCSRVATPLLSPSVLRRRLPLVGAFCVLSFGFSNLFVSRTGSALSLPFAPLLRSTF 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
             QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           +YQWKGEIQTD EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS+EYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSVEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of IVF0023054 vs. ExPASy TrEMBL
Match: A0A6J1HF76 (protein CutA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462991 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.2e-84
Identity = 165/185 (89.19%), Postives = 170/185 (91.89%), Query Frame = 0


Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60
           MAFTL SR ATPL+S   LRRRLPLVGAFCVLS G SNLFVS+TGSALS+PF PLLRS  
Sbjct: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
             QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120

Query: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           +YQWKGEIQTD EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS EYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of IVF0023054 vs. NCBI nr
Match: XP_008444893.1 (PREDICTED: protein CutA, chloroplastic [Cucumis melo])

HSP 1 Score: 358 bits (918), Expect = 2.44e-124
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60
           MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 185
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of IVF0023054 vs. NCBI nr
Match: KAA0065110.1 (protein CutA [Cucumis melo var. makuwa])

HSP 1 Score: 353 bits (906), Expect = 1.65e-122
Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60
           MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALS+PFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKA HPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKAIHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 185
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of IVF0023054 vs. NCBI nr
Match: XP_004152609.1 (protein CutA, chloroplastic [Cucumis sativus] >KGN62736.1 hypothetical protein Csa_022362 [Cucumis sativus])

HSP 1 Score: 350 bits (897), Expect = 3.89e-121
Identity = 180/185 (97.30%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60
           MAFTLSSRAATPLI+ FALRRRLPLVGAFCVLSFGISNLFVSKTGSALS+PFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLITSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           +YQWKGEIQ+DPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 185
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of IVF0023054 vs. NCBI nr
Match: XP_038886215.1 (protein CutA, chloroplastic [Benincasa hispida] >XP_038886216.1 protein CutA, chloroplastic [Benincasa hispida])

HSP 1 Score: 338 bits (867), Expect = 1.46e-116
Identity = 174/185 (94.05%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60
           MA T  SRA +PLIS F LRRRLPLVGAFCVLSFGISNLFVSKTGSALS+PFVPLLRSK 
Sbjct: 1   MALTFCSRATSPLISSFVLRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKF 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           A QGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  ASQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           +YQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK
Sbjct: 121 VYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 185
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of IVF0023054 vs. NCBI nr
Match: XP_023545579.1 (protein CutA, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327 bits (838), Expect = 3.84e-112
Identity = 168/185 (90.81%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60
           MAFTL SR ATPL+S   LRRRLPLVGAFCVLSFG SNLFVSKTGSALS+PF PLLRS  
Sbjct: 1   MAFTLCSRVATPLLSPSVLRRRLPLVGAFCVLSFGFSNLFVSKTGSALSLPFAPLLRSTF 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
             QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180
           +YQWKGEIQTD EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS+EYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSMEYLEWIK 180

Query: 181 SSTKD 185
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of IVF0023054 vs. TAIR 10
Match: AT2G33740.2 (Nitrogen regulatory PII-like, alpha/beta )

HSP 1 Score: 214.2 bits (544), Expect = 9.1e-56
Identity = 117/185 (63.24%), Postives = 142/185 (76.76%), Query Frame = 0


Query: 5   LSSRAATPLISCFALRRRLPLVGAFCVLS-FGISNLFVS---KTGSALSVPFVPLLRSKL 64
           ++S   T L +    RR  P+VGAFCVLS   IS+L  S   K+G A S   VPLLRSK 
Sbjct: 1   MASSLTTRLSAVIGSRRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKF 60

Query: 65  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 124
           + +  + +   I+ME SS  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIVPGIES
Sbjct: 61  SSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIES 120

Query: 125 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 184
           +Y+W+G++Q+D EELLIIKTRQSLL  LT+HV ANH Y+VPEVIALPI GGS +YLEW+K
Sbjct: 121 VYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYDVPEVIALPITGGSDKYLEWLK 180

Query: 185 SSTKD 186
           +ST++
Sbjct: 181 NSTRN 182

[Close]

BLAST of IVF0023054 vs. TAIR 10
Match: AT2G33740.1 (Nitrogen regulatory PII-like, alpha/beta )

HSP 1 Score: 174.1 bits (440), Expect = 1.0e-43
Identity = 99/159 (62.26%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 5   LSSRAATPLISCFALRRRLPLVGAFCVLS-FGISNLFVS---KTGSALSVPFVPLLRSKL 64
           ++S   T L +    RR  P+VGAFCVLS   IS+L  S   K+G A S   VPLLRSK 
Sbjct: 1   MASSLTTRLSAVIGSRRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKF 60

Query: 65  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 124
           + +  + +   I+ME SS  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIVPGIES
Sbjct: 61  SSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIES 120

Query: 125 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYE 160
           +Y+W+G++Q+D EELLIIKTRQSLL  LT+HV ANH YE
Sbjct: 121 VYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYE 156

The following BLAST results are available for this feature:

BLAST of IVF0023054 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93009	1.3e-54	63.24	Protein CutA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CUTA PE=1 SV=1	[more]
Q109R6	9.9e-47	57.06	Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CUTA1 ...	[more]
O60888	1.9e-26	39.13	Protein CutA OS=Homo sapiens OX=9606 GN=CUTA PE=1 SV=2	[more]
Q7SIA8	1.6e-25	51.52	Divalent-cation tolerance protein CutA OS=Thermus thermophilus (strain ATCC 2763...	[more]
P69678	3.6e-25	46.56	Protein CutA OS=Bos taurus OX=9913 GN=CUTA PE=1 SV=1	[more]

BLAST of IVF0023054 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BBF3	2.4e-96	100.00	protein CutA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488107 PE=3 SV=1	[more]
A0A5A7VD29	5.9e-95	98.92	Protein CutA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004450 P...	[more]
A0A0A0LRU0	6.5e-94	97.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370360 PE=3 SV=1	[more]
A0A6J1K4I7	1.3e-86	90.27	protein CutA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492224 PE=3 SV=...	[more]
A0A6J1HF76	1.2e-84	89.19	protein CutA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462991 PE=3 S...	[more]

BLAST of IVF0023054 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444893.1	2.44e-124	100.00	PREDICTED: protein CutA, chloroplastic [Cucumis melo]	[more]
KAA0065110.1	1.65e-122	98.92	protein CutA [Cucumis melo var. makuwa]	[more]
XP_004152609.1	3.89e-121	97.30	protein CutA, chloroplastic [Cucumis sativus] >KGN62736.1 hypothetical protein C...	[more]
XP_038886215.1	1.46e-116	94.05	protein CutA, chloroplastic [Benincasa hispida] >XP_038886216.1 protein CutA, ch...	[more]
XP_023545579.1	3.84e-112	90.81	protein CutA, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0023054 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33740.2	9.1e-56	63.24	Nitrogen regulatory PII-like, alpha/beta	[more]
AT2G33740.1	1.0e-43	62.26	Nitrogen regulatory PII-like, alpha/beta	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015867	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	GENE3D	3.30.70.120		coord: 63..184 e-value: 1.5E-49 score: 168.4
IPR004323	Divalent ion tolerance protein, CutA	PFAM	PF03091	CutA1	coord: 84..181 e-value: 4.6E-38 score: 129.1
IPR004323	Divalent ion tolerance protein, CutA	PANTHER	PTHR23419	DIVALENT CATION TOLERANCE CUTA-RELATED	coord: 13..183
None	No IPR available	PANTHER	PTHR23419:SF8	FI09726P	coord: 13..183
IPR011322	Nitrogen regulatory PII-like, alpha/beta	SUPERFAMILY	54913	GlnB-like	coord: 83..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023054.1	IVF0023054.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010038	response to metal ion
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005507	copper ion binding