IVF0023018 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCTGTGGCTGTATATTTCCACCTTCTTCTCCAATTAACAAAGCCTAAAAATTTTGGTTACAAGAAATAGTTGTTGGATGGAAAATCCAAAGTCGGCGCTCGAGACCGATTCAGAGCGGCCGAACCTGCCGCCGGGATTCCGGTTCCACCCTACCGATGAGGAGCTGGTGGTTCACTATCTGAAGAAGAAGGCTACTTCTCTCCCCTTGCCGGTGGCCATCATCGCCGAAGTTGACCTCTACAAGTACGATCCTTGGGAGCTTCCAGGTTAGTTTTTTCGCCGGAATATTCCATAGCCGAATAAAGTTTTGTTCATTCGTACTCAAACCTTTTATTTTATTTAATTTTCTTCTTTTTTAATGAGAATTCAAGCTCTGTTTCTTTATAATTATCTTGAGAGATTCTGATTCAACTTCGATTTTCATTCGATCACTTATTAGCCCAAAAACTGTATATATCATCCAGACTTAAAATATTCAAGTGAGTGGATGAATGGAGTCTGTAGTGTGTAAATTAGTTTATTTGAAGTGAATAATGTATAGAATTTGATGAATTTAATTTGAAAGTTGTTAAAATAACTATTAATAATTAAATAAAATCAATTCATTGTTTGATGCTATACTTTCAATATAATCTTTACATGATTAAAATTAATATTTTTTTGAATAATTTAAATTGTGTTGGAAATGAGAATATGGGTTATAATTTTTTTTTATTATGTTATAAAAAAAATTCAGCTAAGGCTAGCTATGGAGAGCAAGAATGGTACTTTTTCAGTCCAAGAGATCGAAAGTATCCAACGGAGCACGACCAAATCGGGCAGCAACGTCGGGGTATTGGAAGGCAACTGGAACCGATAAGCCGGTCATAGCTTCGTCGGAAGGGAACCGGAAAGTTGGAGTGAAGAAGGCTTTGGTTTTCTATGGTGGAAAACCTCCAAAAGGAATCAAAACCAATTGGATCATGCATGAATATCGCCTCGCCGATAACAAATCCGGTGGTGGAAACAATAATAAGCCACCAGGATTCATTATCGGCGGCAAGAAAAACTCACTGAGGGTACGAATTTTGAATCTTTGTCAATTTTTAATTTTTGTTTTTTTGAAACTTGTAATCCAAAACGATTTTTTTTTTTTATTGTTTTAGCTCGATGACTGGGTTTTGTGTCGAATTTATAAAAAGAACAACTCGAACAAACCGGGGACGGATTATGAACGAGAAGATTGCTTTGATTCTATGGTTGGGTCAATACCGTCATCGATACAAATCAATAACTACAATCAATCAATGACGACGACCACAACGGCAACGAACTTTAGTATGTATTCTGAATTAGCCTCTTTGTCGCTTCCAATGAAACGGTTGCTGCAACCCCCATCGTGGGAGGAGGAAGAGTATCGGTTGGCTGACAACCGATCCTCAAGAAAAAGATTACAGTTAATGAACGGAGGTGGTGGCGGAGACAACTCAATCGCGGCTCTGCTCAGCCAGCTACCGTCGCTGCAGCAGCCGACATTGCAAGGTTGTATCGTCGGTGATGAGATTTTCCGGCCGGCATTTCAACTGCCGGAGACAAATTGGTATTCATAACGACACACAACTACAAAAGTGAATTGGTGGGTACGTTACAAATTAAAAAAAAAAAAGAAAAAGAAAAAAAAAAGATCAAAGATGACACATTCAAAGTTGATTGCTTACCTAAAATATACAGCTGATTTGATATTTAGGAAATATTCTTAATATTTTGGGGATTTTAATGTTTAGGATAGATTGAAGATAAATGATAAAACAAAGAAGATGATGATAATTATTAAGTTTTTTAAGAAAAAGAAAAATGATTAAGGGAAAGGGAGTCTGGATAAATTTGTTTTATAAATGAACTAATTAATTGTCTGCAAAATGATGGTCTTAAAATTAAATTATCCCAAGATAGGTTTTGTTGTGTGTATATTGGTCACGTCAATAGTGGAAATGGGTATGTGAAAAAAAAATATATACAAAGCTTTTCTAGTGATTATGTGTAAAGAACTAGATTAACATAACCCTAATTATTTTTTTTAGGGTTTGGAGATTATATATGCTTGTATTCATACACTTAGCTTGTCATATATATACAATAATATGAAAGAATTAATATATGGTTTGATTTTTAATTCTTTATTGTATTTAATTATATAGCGGGAGATACAACATCTTCTATCCTTTTGAAAGATTAGATCCAAACTGGTATAATTTTCTTAATTTAAAAAAAAAAAATTGGTTATGAAACTCTAAAATAATTGATTAACTGAGAGAACAAGGAGGGATTGTAAATTCCTTCTTGCTTAATTATTTTTTTTGTCCGTTGAATTTTGCTAAATTCAATCAGTATTTTCAATTAATGTGATAAAAATTAATGAGATTTTTTTTTTTTTTTTAAAATTATAATATGTCGATATTAGGTAGAGGTGATGATGAAGTAGAAAAAATTCAGGAT ATTTCTGTGGCTGTATATTTCCACCTTCTTCTCCAATTAACAAAGCCTAAAAATTTTGGTTACAAGAAATAGTTGTTGGATGGAAAATCCAAAGTCGGCGCTCGAGACCGATTCAGAGCGGCCGAACCTGCCGCCGGGATTCCGGTTCCACCCTACCGATGAGGAGCTGGTGGTTCACTATCTGAAGAAGAAGGCTACTTCTCTCCCCTTGCCGGTGGCCATCATCGCCGAAGTTGACCTCTACAAGTACGATCCTTGGGAGCTTCCAGCTAAGGCTAGCTATGGAGAGCAAGAATGGTACTTTTTCAGTCCAAGAGATCGAAAGTATCCAACGGAGCACGACCAAATCGGGCAGCAACGTCGGGGTATTGGAAGGCAACTGGAACCGATAAGCCGGTCATAGCTTCGTCGGAAGGGAACCGGAAAGTTGGAGTGAAGAAGGCTTTGGTTTTCTATGGTGGAAAACCTCCAAAAGGAATCAAAACCAATTGGATCATGCATGAATATCGCCTCGCCGATAACAAATCCGGTGGTGGAAACAATAATAAGCCACCAGGATTCATTATCGGCGGCAAGAAAAACTCACTGAGGCTCGATGACTGGGTTTTGTGTCGAATTTATAAAAAGAACAACTCGAACAAACCGGGGACGGATTATGAACGAGAAGATTGCTTTGATTCTATGGTTGGGTCAATACCGTCATCGATACAAATCAATAACTACAATCAATCAATGACGACGACCACAACGGCAACGAACTTTAGTATGTATTCTGAATTAGCCTCTTTGTCGCTTCCAATGAAACGGTTGCTGCAACCCCCATCGTGGGAGGAGGAAGAGTATCGGTTGGCTGACAACCGATCCTCAAGAAAAAGATTACAGTTAATGAACGGAGGTGGTGGCGGAGACAACTCAATCGCGGCTCTGCTCAGCCAGCTACCGTCGCTGCAGCAGCCGACATTGCAAGGTTGTATCGTCGGTGATGAGATTTTCCGGCCGGCATTTCAACTGCCGGAGACAAATTGGTATTCATAACGACACACAACTACAAAAGTGAATTGGTGGGTACGTTACAAATTAAAAAAAAAAAAGAAAAAGAAAAAAAAAAGATCAAAGATGACACATTCAAAGTTGATTGCTTACCTAAAATATACAGCTGATTTGATATTTAGGAAATATTCTTAATATTTTGGGGATTTTAATGTTTAGGATAGATTGAAGATAAATGATAAAACAAAGAAGATGATGATAATTATTAAGTTTTTTAAGAAAAAGAAAAATGATTAAGGGAAAGGGAGTCTGGATAAATTTGTTTTATAAATGAACTAATTAATTGTCTGCAAAATGATGGTCTTAAAATTAAATTATCCCAAGATAGGTTTTGTTGTGTGTATATTGGTCACGTCAATAGTGGAAATGGGTATGTGAAAAAAAAATATATACAAAGCTTTTCTAGTGATTATGTGTAAAGAACTAGATTAACATAACCCTAATTATTTTTTTTAGGGTTTGGAGATTATATATGCTTGTATTCATACACTTAGCTTGTCATATATATACAATAATATGAAAGAATTAATATATGGTTTGATTTTTAATTCTTTATTGTATTTAATTATATAGCGGGAGATACAACATCTTCTATCCTTTTGAAAGATTAGATCCAAACTGGTATAATTTTCTTAATTTAAAAAAAAAAAATTGGTTATGAAACTCTAAAATAATTGATTAACTGAGAGAACAAGGAGGGATTGTAAATTCCTTCTTGCTTAATTATTTTTTTTGTCCGTTGAATTTTGCTAAATTCAATCAGTATTTTCAATTAATGTGATAAAAATTAATGAGATTTTTTTTTTTTTTTTAAAATTATAATATGTCGATATTAGGTAGAGGTGATGATGAAGTAGAAAAAATTCAGGAT ATGGTACTTTTTCAGTCCAAGAGATCGAAAGTATCCAACGGAGCACGACCAAATCGGGCAGCAACGTCGGGGTATTGGAAGGCAACTGGAACCGATAAGCCGGTCATAGCTTCGTCGGAAGGGAACCGGAAAGTTGGAGTGAAGAAGGCTTTGGTTTTCTATGGTGGAAAACCTCCAAAAGGAATCAAAACCAATTGGATCATGCATGAATATCGCCTCGCCGATAACAAATCCGGTGGTGGAAACAATAATAAGCCACCAGGATTCATTATCGGCGGCAAGAAAAACTCACTGAGGCTCGATGACTGGGTTTTGTGTCGAATTTATAAAAAGAACAACTCGAACAAACCGGGGACGGATTATGAACGAGAAGATTGCTTTGATTCTATGGTTGGGTCAATACCGTCATCGATACAAATCAATAACTACAATCAATCAATGACGACGACCACAACGGCAACGAACTTTAGTATGTATTCTGAATTAGCCTCTTTGTCGCTTCCAATGAAACGGTTGCTGCAACCCCCATCGTGGGAGGAGGAAGAGTATCGGTTGGCTGACAACCGATCCTCAAGAAAAAGATTACAGTTAATGAACGGAGGTGGTGGCGGAGACAACTCAATCGCGGCTCTGCTCAGCCAGCTACCGTCGCTGCAGCAGCCGACATTGCAAGGTTGTATCGTCGGTGATGAGATTTTCCGGCCGGCATTTCAACTGCCGGAGACAAATTGGTATTCATAA MVLFQSKRSKVSNGARPNRAATSGYWKATGTDKPVIASSEGNRKVGVKKALVFYGGKPPKGIKTNWIMHEYRLADNKSGGGNNNKPPGFIIGGKKNSLRLDDWVLCRIYKKNNSNKPGTDYEREDCFDSMVGSIPSSIQINNYNQSMTTTTTATNFSMYSELASLSLPMKRLLQPPSWEEEEYRLADNRSSRKRLQLMNGGGGGDNSIAALLSQLPSLQQPTLQGCIVGDEIFRPAFQLPETNWYS Homology
BLAST of IVF0023018 vs. ExPASy Swiss-Prot
Match: Q9LD44 (NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 9.7e-50 Identity = 130/300 (43.33%), Postives = 166/300 (55.33%), Query Frame = 0
BLAST of IVF0023018 vs. ExPASy Swiss-Prot
Match: A0SPJ6 (NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM-B2 PE=2 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 3.5e-39 Identity = 80/131 (61.07%), Postives = 91/131 (69.47%), Query Frame = 0
BLAST of IVF0023018 vs. ExPASy Swiss-Prot
Match: Q8H4S4 (NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC010 PE=2 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.3e-38 Identity = 86/145 (59.31%), Postives = 97/145 (66.90%), Query Frame = 0
BLAST of IVF0023018 vs. ExPASy Swiss-Prot
Match: A2YMR0 (NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC010 PE=3 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.7e-38 Identity = 86/145 (59.31%), Postives = 97/145 (66.90%), Query Frame = 0
BLAST of IVF0023018 vs. ExPASy Swiss-Prot
Match: Q8GY42 (NAC transcription factor 25 OS=Arabidopsis thaliana OX=3702 GN=NAC025 PE=2 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 5.0e-38 Identity = 110/268 (41.04%), Postives = 139/268 (51.87%), Query Frame = 0
BLAST of IVF0023018 vs. ExPASy TrEMBL
Match: A0A5D3BCC0 (NAC domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002580 PE=4 SV=1) HSP 1 Score: 484.2 bits (1245), Expect = 3.3e-133 Identity = 236/243 (97.12%), Postives = 237/243 (97.53%), Query Frame = 0
BLAST of IVF0023018 vs. ExPASy TrEMBL
Match: B3SGL4 (NAC domain-containing protein 18-like OS=Cucumis melo OX=3656 GN=JA PE=2 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.2e-132 Identity = 235/243 (96.71%), Postives = 237/243 (97.53%), Query Frame = 0
BLAST of IVF0023018 vs. ExPASy TrEMBL
Match: A0A0A0LGE3 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G852460 PE=4 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129 Identity = 230/243 (94.65%), Postives = 234/243 (96.30%), Query Frame = 0
BLAST of IVF0023018 vs. ExPASy TrEMBL
Match: A0A6J1IMG9 (NAC transcription factor 56-like OS=Cucurbita maxima OX=3661 GN=LOC111476908 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 2.3e-94 Identity = 186/249 (74.70%), Postives = 201/249 (80.72%), Query Frame = 0
BLAST of IVF0023018 vs. ExPASy TrEMBL
Match: A0A7J7C900 (NAC domain protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00226 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 7.4e-61 Identity = 139/264 (52.65%), Postives = 172/264 (65.15%), Query Frame = 0
BLAST of IVF0023018 vs. NCBI nr
Match: KAA0036878.1 (NAC domain-containing protein 18-like [Cucumis melo var. makuwa] >TYJ95938.1 NAC domain-containing protein 18-like [Cucumis melo var. makuwa]) HSP 1 Score: 484 bits (1245), Expect = 4.99e-171 Identity = 236/243 (97.12%), Postives = 237/243 (97.53%), Query Frame = 0
BLAST of IVF0023018 vs. NCBI nr
Match: NP_001284435.1 (NAC domain-containing protein 18-like [Cucumis melo] >ABM88940.1 NAC transcription factor [Cucumis melo]) HSP 1 Score: 482 bits (1240), Expect = 2.88e-170 Identity = 235/243 (96.71%), Postives = 237/243 (97.53%), Query Frame = 0
BLAST of IVF0023018 vs. NCBI nr
Match: XP_004147807.1 (NAC transcription factor 56 [Cucumis sativus] >KGN59897.1 hypothetical protein Csa_000751 [Cucumis sativus]) HSP 1 Score: 471 bits (1213), Expect = 3.74e-166 Identity = 230/243 (94.65%), Postives = 234/243 (96.30%), Query Frame = 0
BLAST of IVF0023018 vs. NCBI nr
Match: XP_038896385.1 (NAC transcription factor 56-like [Benincasa hispida]) HSP 1 Score: 404 bits (1037), Expect = 2.10e-139 Identity = 203/244 (83.20%), Postives = 212/244 (86.89%), Query Frame = 0
BLAST of IVF0023018 vs. NCBI nr
Match: XP_022976543.1 (NAC transcription factor 56-like [Cucurbita maxima]) HSP 1 Score: 355 bits (910), Expect = 5.71e-120 Identity = 186/249 (74.70%), Postives = 201/249 (80.72%), Query Frame = 0
BLAST of IVF0023018 vs. TAIR 10
Match: AT3G15510.1 (NAC domain containing protein 2 ) HSP 1 Score: 198.4 bits (503), Expect = 6.9e-51 Identity = 130/300 (43.33%), Postives = 166/300 (55.33%), Query Frame = 0
BLAST of IVF0023018 vs. TAIR 10
Match: AT1G61110.1 (NAC domain containing protein 25 ) HSP 1 Score: 159.5 bits (402), Expect = 3.5e-39 Identity = 110/268 (41.04%), Postives = 139/268 (51.87%), Query Frame = 0
BLAST of IVF0023018 vs. TAIR 10
Match: AT1G52880.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 158.7 bits (400), Expect = 6.1e-39 Identity = 116/269 (43.12%), Postives = 140/269 (52.04%), Query Frame = 0
BLAST of IVF0023018 vs. TAIR 10
Match: AT3G04070.1 (NAC domain containing protein 47 ) HSP 1 Score: 135.2 bits (339), Expect = 7.2e-32 Identity = 72/128 (56.25%), Postives = 88/128 (68.75%), Query Frame = 0
BLAST of IVF0023018 vs. TAIR 10
Match: AT3G04070.2 (NAC domain containing protein 47 ) HSP 1 Score: 132.1 bits (331), Expect = 6.1e-31 Identity = 67/119 (56.30%), Postives = 81/119 (68.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|