IVF0023007 (gene) Melon (IVF77) v1

Overview


Name	IVF0023007
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Cyclin
Location	chr07: 21559996 .. 21561466 (-)
RNA-Seq Expression	IVF0023007
Synteny	IVF0023007

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAATAAAAATGAGAGTGAAAGCACTTTTGAAATAGGTGAAGATGGATTCAGTGGGAGAAAAAGAAGAAATGGTTGGGATTCCCAAAGTCATAAACTATCTATCCTCTGTTCTACAGAGAGTTTCGGAGTCCAATGATCAAGAAGACAGGATGATGAATAATGGTACCAAAAGGAATAATTATTCAGGGTTTGATGGAATATCAAGACCAAGCATTTCCATACAAAGTTATTTGGAGAGGATTTTTAAGTATGCAAATTGTAGCCCAAGTTGCTTTGTTGTTGCTTATGTTTATCTTCATCGCTTTCTTCACAATCATCATCCTTCCAATTTTCACATTGATTCCTTCAATGTTCATAGACTTCTCATTACAAGTGTTCTTGTTTCTGCCAAGTTCTTCGATGATTTGTGAGTATATATAGTTCCCTTCATCTTCTTCCTCTTCTTCTTCTTCGTCTTTCATTTCGGTTTGAGATCTCGTCTTACCATTCTTCTTCTTCTTCTTCTTCTTTCTGCCAACTTTCCTCATTGTCCTGTTCTTATTCTTTCTTTAAATCTATCACGTCTGAATGTTTGTTAATTTATTCCATGAAATCTTGAAGTAGATGAAGTAATTTTTTGTTTTCAGGTATTACAACAATGCGTACTATGCAAAAGTTGGTGGAATAAGCACCATGGAAATGAACCTTCTTGAATTGGATTTCTTATTTGGTTTGAGATTCCAACTAAATGTGTCACCAAACACATTTCACATTTACTGCTCTTATCTCCAATCAGAAATGCTATTAACAACGCAACCCAAACTCCAAATCCAAACACCTATAAAACAACTTCACTCTTTCACTGAAGATCAAGACGCTTCCCTTCAAAAGCAGTTGACGGTTTGAGCGACGATCTTCGAAATCACTTTTGTTATTTTTAAAAGGGGTTGTTTTTAAATATAAGAAAATGAGTTAAAAATATTTACAAACGTAAGAAAACGTGTTTGTTATATTTTATAAATATTTTCAATATGTTGGTCGTTTTAAAACAACTTCCCTTTTTAAAATCACTATAAACATGTTTTTGTTTAGTTTTACATTTTCAAATTCGATTTTCAAATCATCTAATTTGTTTTGAAGGATTAAAAGCATGTTTTATAGTAATTTTGAATAAAAGTGCTTTTAATCATTTTAAACTACGATTCAAACCTATCGTAAATTATTAGAAAGTGATCGTAATTGTAATAGGAAGTTTCTTCTTCTTTCTAATTTTTTTTTTCTTTTGGGTGAGTTATGAAAGTTATTAGGGGCAAATGTGGGATTTCGTTTCAAAGTTTTTTTTTTTTTGGGCCAAAAGAAGAATGAAAAGTTTATTCCCTAAATGGGTTTTTGATTTTATTACCCAAATTTGCTTTCCTTCTTGTTGTTGGACATTTTTGCCCCTTCTATGTGTATTTGTGTAGAGTTGTATTTTGATGATTTGGAAGAT

mRNA sequence

CCAAAATAAAAATGAGAGTGAAAGCACTTTTGAAATAGGTGAAGATGGATTCAGTGGGAGAAAAAGAAGAAATGGTTGGGATTCCCAAAGTCATAAACTATCTATCCTCTGTTCTACAGAGAGTTTCGGAGTCCAATGATCAAGAAGACAGGATGATGAATAATGGTACCAAAAGGAATAATTATTCAGGGTTTGATGGAATATCAAGACCAAGCATTTCCATACAAAGTTATTTGGAGAGGATTTTTAAGTATGCAAATTGTAGCCCAAGTTGCTTTGTTGTTGCTTATGTTTATCTTCATCGCTTTCTTCACAATCATCATCCTTCCAATTTTCACATTGATTCCTTCAATGTTCATAGACTTCTCATTACAAGTGTTCTTGTTTCTGCCAAGTTCTTCGATGATTTGTATTACAACAATGCGTACTATGCAAAAGTTGGTGGAATAAGCACCATGGAAATGAACCTTCTTGAATTGGATTTCTTATTTGGTTTGAGATTCCAACTAAATGTGTCACCAAACACATTTCACATTTACTGCTCTTATCTCCAATCAGAAATGCTATTAACAACGCAACCCAAACTCCAAATCCAAACACCTATAAAACAACTTCACTCTTTCACTGAAGATCAAGACGCTTCCCTTCAAAAGCAGTTGACGGTTTGAGCGACGATCTTCGAAATCACTTTTGTTATTTTTAAAAGGGGTTGTTTTTAAATATAAGAAAATGAGTTAAAAATATTTACAAACGTAAGAAAACGTGTTTGTTATATTTTATAAATATTTTCAATATGTTGGTCGTTTTAAAACAACTTCCCTTTTTAAAATCACTATAAACATGTTTTTGTTTAGTTTTACATTTTCAAATTCGATTTTCAAATCATCTAATTTGTTTTGAAGGATTAAAAGCATGTTTTATAGTAATTTTGAATAAAAGTGCTTTTAATCATTTTAAACTACGATTCAAACCTATCGTAAATTATTAGAAAGTGATCGTAATTGTAATAGGAAGTTTCTTCTTCTTTCTAATTTTTTTTTTCTTTTGGGTGAGTTATGAAAGTTATTAGGGGCAAATGTGGGATTTCGTTTCAAAGTTTTTTTTTTTTTGGGCCAAAAGAAGAATGAAAAGTTTATTCCCTAAATGGGTTTTTGATTTTATTACCCAAATTTGCTTTCCTTCTTGTTGTTGGACATTTTTGCCCCTTCTATGTGTATTTGTGTAGAGTTGTATTTTGATGATTTGGAAGAT

Coding sequence (CDS)

ATGGATTCAGTGGGAGAAAAAGAAGAAATGGTTGGGATTCCCAAAGTCATAAACTATCTATCCTCTGTTCTACAGAGAGTTTCGGAGTCCAATGATCAAGAAGACAGGATGATGAATAATGGTACCAAAAGGAATAATTATTCAGGGTTTGATGGAATATCAAGACCAAGCATTTCCATACAAAGTTATTTGGAGAGGATTTTTAAGTATGCAAATTGTAGCCCAAGTTGCTTTGTTGTTGCTTATGTTTATCTTCATCGCTTTCTTCACAATCATCATCCTTCCAATTTTCACATTGATTCCTTCAATGTTCATAGACTTCTCATTACAAGTGTTCTTGTTTCTGCCAAGTTCTTCGATGATTTGTATTACAACAATGCGTACTATGCAAAAGTTGGTGGAATAAGCACCATGGAAATGAACCTTCTTGAATTGGATTTCTTATTTGGTTTGAGATTCCAACTAAATGTGTCACCAAACACATTTCACATTTACTGCTCTTATCTCCAATCAGAAATGCTATTAACAACGCAACCCAAACTCCAAATCCAAACACCTATAAAACAACTTCACTCTTTCACTGAAGATCAAGACGCTTCCCTTCAAAAGCAGTTGACGGTTTGA

Protein sequence

MDSVGEKEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTPIKQLHSFTEDQDASLQKQLTV

Homology

[Close]

BLAST of IVF0023007 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.0e-56
Identity = 124/201 (61.69%), Postives = 148/201 (73.63%), Query Frame = 0


Query: 4   VGEKEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSY 63
           + E E    + K+I +LSS+L+RV+ESND   R+    T+    S F G+SRP+I+IQSY
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESNDLTRRV---ATQSQRVSVFHGLSRPTITIQSY 60

Query: 64  LERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLY 123
           LERIFKYANCSPSCFVVAYVYL RF   H   +  I+SFNVHRLLITSV+V+AKF DDLY
Sbjct: 61  LERIFKYANCSPSCFVVAYVYLDRF--THRQPSLPINSFNVHRLLITSVMVAAKFLDDLY 120

Query: 124 YNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQI 183
           YNNAYYAKVGGIST EMN LELDFLFGL F+LNV+PNTF+ Y SYLQ EM L     L +
Sbjct: 121 YNNAYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVV 180

Query: 184 QTPIKQLHSFTEDQDASLQKQ 205
               + L +F +D +AS QKQ
Sbjct: 181 VPSSRSLITFNDD-EASHQKQ 195

[Close]

BLAST of IVF0023007 vs. ExPASy Swiss-Prot
Match: Q7XC35 (Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-47
Identity = 102/186 (54.84%), Postives = 127/186 (68.28%), Query Frame = 0


Query: 13  IPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFKYAN 72
           +P+V+  LSS+LQRV+E ND        G +    S F G+++P+ISI  YLERIF++AN
Sbjct: 10  VPRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGYLERIFRFAN 69

Query: 73  CSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKV 132
           CSPSC+VVAY+YL RFL         +DSFNVHRLLITSVL + KF DD+ YNNAY+A+V
Sbjct: 70  CSPSCYVVAYIYLDRFLRRR--PALAVDSFNVHRLLITSVLTAVKFVDDICYNNAYFARV 129

Query: 133 GGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTPIKQLHS 192
           GGIS MEMN LE+DFLFG+ F LNV+P  F  YC+ LQSEM    QP       + +LH 
Sbjct: 130 GGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEMTYLEQPP---AVDLPRLHC 189

Query: 193 FTEDQD 199
              DQD
Sbjct: 190 CPSDQD 190

[Close]

BLAST of IVF0023007 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.9e-47
Identity = 106/191 (55.50%), Postives = 137/191 (71.73%), Query Frame = 0


Query: 4   VGEKEEMVGI-PKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQS 63
           + ++E M  I P VI  +SS+LQRVSE+ND   R      +    S F+ +++PSISI+S
Sbjct: 10  IHDQEPMAEIMPNVITAMSSLLQRVSETNDDLSRPFR---EHKRISAFNAVTKPSISIRS 69

Query: 64  YLERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDL 123
           Y+ERIFKYA+CS SC++VAY+YL RF+         IDS NVHRL+ITSVLVSAKF DDL
Sbjct: 70  YMERIFKYADCSDSCYIVAYIYLDRFIQKQ--PLLPIDSSNVHRLIITSVLVSAKFMDDL 129

Query: 124 YYNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTT--QPK 183
            YNNA+YAKVGGI+T EMNLLELDFLFG+ FQLNV+ +T++ YCS LQ EM++ T   P 
Sbjct: 130 CYNNAFYAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVMRTMYSPL 189

Query: 184 LQIQTPIKQLH 192
           L+    ++  H
Sbjct: 190 LEPAFLVRSFH 195

[Close]

BLAST of IVF0023007 vs. ExPASy Swiss-Prot
Match: Q9FKF6 (Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.3e-46
Identity = 98/168 (58.33%), Postives = 126/168 (75.00%), Query Frame = 0


Query: 13  IPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFKYAN 72
           +P V+  +S +LQRVSE+ND       N +++   S F G+++PSISI+SYLERIF+YAN
Sbjct: 22  MPSVLTAMSYLLQRVSETND-------NLSQKQKPSSFTGVTKPSISIRSYLERIFEYAN 81

Query: 73  CSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKV 132
           CS SC++VAY+YL RF+         I+SFNVHRL+ITSVLVSAKF DDL YNN YYAKV
Sbjct: 82  CSYSCYIVAYIYLDRFVKKQ--PFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKV 141

Query: 133 GGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPK 181
           GGIS  EMN+LELDFLFG+ F+LNV+ +TF+ YC +LQ EM +  + K
Sbjct: 142 GGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAMLMKMK 180

[Close]

BLAST of IVF0023007 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.0e-36
Identity = 86/194 (44.33%), Postives = 124/194 (63.92%), Query Frame = 0


Query: 7   KEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLER 66
           K+     PKV+  L++ L R  + N+    ++++   +++ + F G   P +SI+ Y ER
Sbjct: 29  KKNNTEYPKVLLLLAAYLDRSVQKNED---LLDSNKIKDSSTIFHGHRAPDLSIKLYAER 88

Query: 67  IFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNN 126
           IFKY+ CSPSCFV+A +Y+ R+L   H    ++ S +VHRLLITSV+V+AKF DD ++NN
Sbjct: 89  IFKYSECSPSCFVLALIYMERYLQQPH---VYMTSLSVHRLLITSVVVAAKFTDDAFFNN 148

Query: 127 AYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTP 186
           A+YA+VGGIST+EMN LELD LF L F+L V   TF  YC  L+ E ++     L I  P
Sbjct: 149 AFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETMV-----LVIDRP 208

Query: 187 IKQLHSFTEDQDAS 201
           I+Q+H     +D S
Sbjct: 209 IQQVHGVNSTKDLS 211

[Close]

BLAST of IVF0023007 vs. ExPASy TrEMBL
Match: A0A1S3BYF6 (Cyclin OS=Cucumis melo OX=3656 GN=LOC103494450 PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.3e-111
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MDSVGEKEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISI 60
           MDSVGEKEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISI
Sbjct: 1   MDSVGEKEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISI 60

Query: 61  QSYLERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFD 120
           QSYLERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFD
Sbjct: 61  QSYLERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFD 120

Query: 121 DLYYNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPK 180
           DLYYNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPK
Sbjct: 121 DLYYNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPK 180

Query: 181 LQIQTPIKQLHSFTEDQDASLQKQLTV 208
           LQIQTPIKQLHSFTEDQDASLQKQLTV
Sbjct: 181 LQIQTPIKQLHSFTEDQDASLQKQLTV 207

[Close]

BLAST of IVF0023007 vs. ExPASy TrEMBL
Match: A0A5A7TTH4 (Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004410 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.7e-106
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 10  MVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFK 69
           MVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFK
Sbjct: 1   MVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFK 60

Query: 70  YANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYY 129
           YANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYY
Sbjct: 61  YANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYY 120

Query: 130 AKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTPIKQ 189
           AKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTPIKQ
Sbjct: 121 AKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTPIKQ 180

Query: 190 LHSFTEDQDASLQKQLTV 208
           LHSFTEDQDASLQKQLTV
Sbjct: 181 LHSFTEDQDASLQKQLTV 198

[Close]

BLAST of IVF0023007 vs. ExPASy TrEMBL
Match: A0A0A0KZ83 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_4G025110 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.8e-92
Identity = 179/198 (90.40%), Postives = 186/198 (93.94%), Query Frame = 0


Query: 4   VGEKEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSY 63
           +GEKE MVGIPKVINYLSSVLQRVS+SND+E+RM+   TKRNN SGFDGISRPSISIQSY
Sbjct: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMI---TKRNN-SGFDGISRPSISIQSY 60

Query: 64  LERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLY 123
           LERIFKYANCSPSCFV AYVYLHRFLHNHHPSN HIDSFNVHRLLITSVLVSAKFFDDLY
Sbjct: 61  LERIFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLY 120

Query: 124 YNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQI 183
           YNNAYYAKVGGISTMEMN LELDFLFGLRFQLNVSPNTFHIYCSYLQSEML TTQPKLQI
Sbjct: 121 YNNAYYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQI 180

Query: 184 QTPIKQLHSFTEDQDASL 202
           QTPI+QLHSF ED +A L
Sbjct: 181 QTPIEQLHSFPEDPEARL 194

[Close]

BLAST of IVF0023007 vs. ExPASy TrEMBL
Match: A0A6J1CIA6 (Cyclin OS=Momordica charantia OX=3673 GN=LOC111011438 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.1e-62
Identity = 138/202 (68.32%), Postives = 159/202 (78.71%), Query Frame = 0


Query: 6   EKEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLE 65
           + +E+  IP+VI +LSS+LQRVSESND       +G +    S F G++RP+ISI SYL+
Sbjct: 4   DHQEIAPIPRVITFLSSLLQRVSESND-------DGGQAPKISAFHGLTRPAISIHSYLQ 63

Query: 66  RIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYN 125
           RIFKYANCSPSCFVVAYVYL RF+  H   +  IDSFNVHRLLITSVL SAKF DDLYYN
Sbjct: 64  RIFKYANCSPSCFVVAYVYLDRFVQQH--PSLPIDSFNVHRLLITSVLXSAKFLDDLYYN 123

Query: 126 NAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQT 185
           NAYYAKVGGISTMEMNLLE+DFLFGL FQLNV+PNTFH YCSYLQ+EMLL TQP LQ +T
Sbjct: 124 NAYYAKVGGISTMEMNLLEVDFLFGLGFQLNVTPNTFHTYCSYLQTEMLL-TQPNLQTKT 183

Query: 186 PIKQLHSFTEDQDASLQKQLTV 208
            +K    F ED + S Q+QLTV
Sbjct: 184 LLK-FRPFVED-ETSHQRQLTV 193

[Close]

BLAST of IVF0023007 vs. ExPASy TrEMBL
Match: A0A6J1JX61 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111489131 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 5.9e-59
Identity = 135/195 (69.23%), Postives = 155/195 (79.49%), Query Frame = 0


Query: 11  VGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFKY 70
           V IPKVI +LSS+LQRVSESNDQ   + +        S F G+++P+ISIQ+YLERIFKY
Sbjct: 12  VPIPKVITFLSSLLQRVSESNDQSHELHSAA----KVSAFHGLTKPTISIQTYLERIFKY 71

Query: 71  ANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYA 130
           ANCSPSCFVVAYVYL R +  H   +  IDSFNVHRLLITSVLVSAKF DDL YNNAYYA
Sbjct: 72  ANCSPSCFVVAYVYLDRLVQRH--PSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYYA 131

Query: 131 KVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTPIKQL 190
           KVGGISTMEMNLLE+DFLFGL FQLNV+PNTFH YCSYL++E +L+TQ  L I  PIK  
Sbjct: 132 KVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAE-VLSTQSNLPI--PIK-F 191

Query: 191 HSFTEDQDASLQKQL 206
           +SF ED +AS +KQL
Sbjct: 192 YSFPED-EASHKKQL 195

[Close]

BLAST of IVF0023007 vs. NCBI nr
Match: XP_008453846.1 (PREDICTED: cyclin-U4-1-like [Cucumis melo])

HSP 1 Score: 410 bits (1055), Expect = 1.69e-144
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MDSVGEKEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISI 60
           MDSVGEKEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISI
Sbjct: 1   MDSVGEKEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISI 60

Query: 61  QSYLERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFD 120
           QSYLERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFD
Sbjct: 61  QSYLERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFD 120

Query: 121 DLYYNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPK 180
           DLYYNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPK
Sbjct: 121 DLYYNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPK 180

Query: 181 LQIQTPIKQLHSFTEDQDASLQKQLTV 207
           LQIQTPIKQLHSFTEDQDASLQKQLTV
Sbjct: 181 LQIQTPIKQLHSFTEDQDASLQKQLTV 207

[Close]

BLAST of IVF0023007 vs. NCBI nr
Match: KAA0044685.1 (cyclin-U4-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 393 bits (1010), Expect = 8.89e-138
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 10  MVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFK 69
           MVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFK
Sbjct: 1   MVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFK 60

Query: 70  YANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYY 129
           YANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYY
Sbjct: 61  YANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYY 120

Query: 130 AKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTPIKQ 189
           AKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTPIKQ
Sbjct: 121 AKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTPIKQ 180

Query: 190 LHSFTEDQDASLQKQLTV 207
           LHSFTEDQDASLQKQLTV
Sbjct: 181 LHSFTEDQDASLQKQLTV 198

[Close]

BLAST of IVF0023007 vs. NCBI nr
Match: XP_004146934.1 (cyclin-U4-1 [Cucumis sativus] >KGN53181.1 hypothetical protein Csa_014857 [Cucumis sativus])

HSP 1 Score: 347 bits (891), Expect = 1.14e-119
Identity = 179/198 (90.40%), Postives = 186/198 (93.94%), Query Frame = 0


Query: 4   VGEKEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSY 63
           +GEKE MVGIPKVINYLSSVLQRVS+SND+E+RM+   TKRNN SGFDGISRPSISIQSY
Sbjct: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMI---TKRNN-SGFDGISRPSISIQSY 60

Query: 64  LERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLY 123
           LERIFKYANCSPSCFV AYVYLHRFLHNHHPSN HIDSFNVHRLLITSVLVSAKFFDDLY
Sbjct: 61  LERIFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLY 120

Query: 124 YNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQI 183
           YNNAYYAKVGGISTMEMN LELDFLFGLRFQLNVSPNTFHIYCSYLQSEML TTQPKLQI
Sbjct: 121 YNNAYYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQI 180

Query: 184 QTPIKQLHSFTEDQDASL 201
           QTPI+QLHSF ED +A L
Sbjct: 181 QTPIEQLHSFPEDPEARL 194

[Close]

BLAST of IVF0023007 vs. NCBI nr
Match: XP_038900591.1 (cyclin-U4-1-like [Benincasa hispida])

HSP 1 Score: 284 bits (726), Expect = 1.72e-94
Identity = 158/199 (79.40%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 7   KEEMVGIPKVINYLSSVLQRVSESNDQEDRMMN-NGTKRNNYSGFDGISRPSISIQSYLE 66
           + EM GIPKVI+ +SS+L+RVSESNDQ+ R    + TK    SGF G+SRPSISI+SYLE
Sbjct: 5   EREMAGIPKVISLMSSILERVSESNDQKRRTRELDDTKI--VSGFYGLSRPSISIKSYLE 64

Query: 67  RIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYN 126
           RIFKYANCSPSCFVVAYVYLHRFLHN  PS F IDSFNVHRLLITSVL+SAKF DDLYYN
Sbjct: 65  RIFKYANCSPSCFVVAYVYLHRFLHNQ-PS-FSIDSFNVHRLLITSVLLSAKFLDDLYYN 124

Query: 127 NAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQT 186
           NAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQI  
Sbjct: 125 NAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIH- 184

Query: 187 PIKQLHSFTEDQDASLQKQ 204
                HSFT D++ SL+KQ
Sbjct: 185 -----HSFT-DEETSLKKQ 192

[Close]

BLAST of IVF0023007 vs. NCBI nr
Match: XP_022140882.1 (cyclin-U4-1-like [Momordica charantia])

HSP 1 Score: 248 bits (633), Expect = 1.97e-80
Identity = 140/202 (69.31%), Postives = 159/202 (78.71%), Query Frame = 0


Query: 6   EKEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLE 65
           + +E+  IP+VI +LSS+LQRVSESND        G +    S F G++RP+ISI SYL+
Sbjct: 4   DHQEIAPIPRVITFLSSLLQRVSESNDD-------GGQAPKISAFHGLTRPAISIHSYLQ 63

Query: 66  RIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYN 125
           RIFKYANCSPSCFVVAYVYL RF+  H PS   IDSFNVHRLLITSVL SAKF DDLYYN
Sbjct: 64  RIFKYANCSPSCFVVAYVYLDRFVQQH-PS-LPIDSFNVHRLLITSVLXSAKFLDDLYYN 123

Query: 126 NAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQT 185
           NAYYAKVGGISTMEMNLLE+DFLFGL FQLNV+PNTFH YCSYLQ+EMLLT QP LQ +T
Sbjct: 124 NAYYAKVGGISTMEMNLLEVDFLFGLGFQLNVTPNTFHTYCSYLQTEMLLT-QPNLQTKT 183

Query: 186 PIKQLHSFTEDQDASLQKQLTV 207
            +K    F ED + S Q+QLTV
Sbjct: 184 LLK-FRPFVED-ETSHQRQLTV 193

[Close]

BLAST of IVF0023007 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 220.3 bits (560), Expect = 1.4e-57
Identity = 124/201 (61.69%), Postives = 148/201 (73.63%), Query Frame = 0


Query: 4   VGEKEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSY 63
           + E E    + K+I +LSS+L+RV+ESND   R+    T+    S F G+SRP+I+IQSY
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESNDLTRRV---ATQSQRVSVFHGLSRPTITIQSY 60

Query: 64  LERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLY 123
           LERIFKYANCSPSCFVVAYVYL RF   H   +  I+SFNVHRLLITSV+V+AKF DDLY
Sbjct: 61  LERIFKYANCSPSCFVVAYVYLDRF--THRQPSLPINSFNVHRLLITSVMVAAKFLDDLY 120

Query: 124 YNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQI 183
           YNNAYYAKVGGIST EMN LELDFLFGL F+LNV+PNTF+ Y SYLQ EM L     L +
Sbjct: 121 YNNAYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVV 180

Query: 184 QTPIKQLHSFTEDQDASLQKQ 205
               + L +F +D +AS QKQ
Sbjct: 181 VPSSRSLITFNDD-EASHQKQ 195

[Close]

BLAST of IVF0023007 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 )

HSP 1 Score: 189.9 bits (481), Expect = 2.1e-48
Identity = 106/191 (55.50%), Postives = 137/191 (71.73%), Query Frame = 0


Query: 4   VGEKEEMVGI-PKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQS 63
           + ++E M  I P VI  +SS+LQRVSE+ND   R      +    S F+ +++PSISI+S
Sbjct: 10  IHDQEPMAEIMPNVITAMSSLLQRVSETNDDLSRPFR---EHKRISAFNAVTKPSISIRS 69

Query: 64  YLERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDL 123
           Y+ERIFKYA+CS SC++VAY+YL RF+         IDS NVHRL+ITSVLVSAKF DDL
Sbjct: 70  YMERIFKYADCSDSCYIVAYIYLDRFIQKQ--PLLPIDSSNVHRLIITSVLVSAKFMDDL 129

Query: 124 YYNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTT--QPK 183
            YNNA+YAKVGGI+T EMNLLELDFLFG+ FQLNV+ +T++ YCS LQ EM++ T   P 
Sbjct: 130 CYNNAFYAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVMRTMYSPL 189

Query: 184 LQIQTPIKQLH 192
           L+    ++  H
Sbjct: 190 LEPAFLVRSFH 195

[Close]

BLAST of IVF0023007 vs. TAIR 10
Match: AT5G61650.1 (CYCLIN P4;2 )

HSP 1 Score: 184.9 bits (468), Expect = 6.6e-47
Identity = 98/168 (58.33%), Postives = 126/168 (75.00%), Query Frame = 0


Query: 13  IPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFKYAN 72
           +P V+  +S +LQRVSE+ND       N +++   S F G+++PSISI+SYLERIF+YAN
Sbjct: 22  MPSVLTAMSYLLQRVSETND-------NLSQKQKPSSFTGVTKPSISIRSYLERIFEYAN 81

Query: 73  CSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKV 132
           CS SC++VAY+YL RF+         I+SFNVHRL+ITSVLVSAKF DDL YNN YYAKV
Sbjct: 82  CSYSCYIVAYIYLDRFVKKQ--PFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKV 141

Query: 133 GGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPK 181
           GGIS  EMN+LELDFLFG+ F+LNV+ +TF+ YC +LQ EM +  + K
Sbjct: 142 GGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAMLMKMK 180

[Close]

BLAST of IVF0023007 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 )

HSP 1 Score: 149.4 bits (376), Expect = 3.1e-36
Identity = 80/176 (45.45%), Postives = 117/176 (66.48%), Query Frame = 0


Query: 14  PKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFKYANC 73
           P V++ LSS L+R    N  +  ++ +    ++ + FDG S P ISI  YL+RIFKY+ C
Sbjct: 32  PTVLSRLSSSLERSLLLNHDDKILLGS---PDSVTVFDGRSPPEISIAHYLDRIFKYSCC 91

Query: 74  SPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVG 133
           SPSCFV+A++Y+  FLH    +   +   NVHRL+IT+V+++AK FDD Y+NNAYYA+VG
Sbjct: 92  SPSCFVIAHIYIDHFLHK---TRALLKPLNVHRLIITTVMLAAKVFDDRYFNNAYYARVG 151

Query: 134 GISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTPIKQ 190
           G++T E+N LE++ LF L F+L V P TFH +C  L+ +     +   QI+ PIK+
Sbjct: 152 GVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ----NRDGFQIEWPIKE 197

[Close]

BLAST of IVF0023007 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-33
Identity = 72/162 (44.44%), Postives = 104/162 (64.20%), Query Frame = 0


Query: 14  PKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFKYANC 73
           P+V+  +S V++++   N+   +      K  +   F G+  PSISI  YLERI+KY  C
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGK--SLEAFHGVRAPSISIAKYLERIYKYTKC 84

Query: 74  SPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVG 133
           SP+CFVV YVY+ R  H H  S   + S NVHRLL+T V+++AK  DD++YNN +YA+VG
Sbjct: 85  SPACFVVGYVYIDRLAHKHPGS--LVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVG 144

Query: 134 GISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLL 176
           G+S  ++N +EL+ LF L F++ VS   F  YC +L+ EM L
Sbjct: 145 GVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQL 182

The following BLAST results are available for this feature:

BLAST of IVF0023007 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80513	2.0e-56	61.69	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]
Q7XC35	1.3e-47	54.84	Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1	[more]
Q9LY16	2.9e-47	55.50	Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1	[more]
Q9FKF6	9.3e-46	58.33	Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1	[more]
Q75HV0	3.0e-36	44.33	Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1	[more]

BLAST of IVF0023007 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BYF6	1.3e-111	100.00	Cyclin OS=Cucumis melo OX=3656 GN=LOC103494450 PE=3 SV=1	[more]
A0A5A7TTH4	1.7e-106	100.00	Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004410 PE=3 SV...	[more]
A0A0A0KZ83	1.8e-92	90.40	Cyclin OS=Cucumis sativus OX=3659 GN=Csa_4G025110 PE=3 SV=1	[more]
A0A6J1CIA6	1.1e-62	68.32	Cyclin OS=Momordica charantia OX=3673 GN=LOC111011438 PE=3 SV=1	[more]
A0A6J1JX61	5.9e-59	69.23	Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111489131 PE=3 SV=1	[more]

BLAST of IVF0023007 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453846.1	1.69e-144	100.00	PREDICTED: cyclin-U4-1-like [Cucumis melo]	[more]
KAA0044685.1	8.89e-138	100.00	cyclin-U4-1-like [Cucumis melo var. makuwa]	[more]
XP_004146934.1	1.14e-119	90.40	cyclin-U4-1 [Cucumis sativus] >KGN53181.1 hypothetical protein Csa_014857 [Cucum...	[more]
XP_038900591.1	1.72e-94	79.40	cyclin-U4-1-like [Benincasa hispida]	[more]
XP_022140882.1	1.97e-80	69.31	cyclin-U4-1-like [Momordica charantia]	[more]

BLAST of IVF0023007 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44740.1	1.4e-57	61.69	cyclin p4;1	[more]
AT5G07450.1	2.1e-48	55.50	cyclin p4;3	[more]
AT5G61650.1	6.6e-47	58.33	CYCLIN P4;2	[more]
AT3G63120.1	3.1e-36	45.45	cyclin p1;1	[more]
AT3G21870.1	1.1e-33	44.44	cyclin p2;1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012389	Cyclin P/U	PIRSF	PIRSF027110	PREG	coord: 1..206 e-value: 2.9E-73 score: 244.1
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 37..155 e-value: 6.9E-38 score: 130.5
None	No IPR available	GENE3D	1.10.472.10		coord: 3..206 e-value: 3.9E-54 score: 185.4
None	No IPR available	PANTHER	PTHR15615:SF101	CYCLIN	coord: 6..207
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 6..207
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 62..143 e-value: 0.00920186 score: 32.2105
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 62..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023007.2	IVF0023007.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function	GO:0019901	protein kinase binding