Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTTCAAGCCAAGCAAATCCCACGATGAATTTGAAAGAGTTTGTTCCGACAGTCCTATGTCGGAACAAGCTAAACTCAACCCTATGGCCAAGGCTTGTGTAGGAAATAGTTCAAGCCAAAGGGTTGAAAAGGAAAACGAAGAAGAAGAAATGCAAACCAATGATCATCAGTGGCGTTGA mRNA sequence
ATGTCTTTCAAGCCAAGCAAATCCCACGATGAATTTGAAAGAGTTTGTTCCGACAGTCCTATGTCGGAACAAGCTAAACTCAACCCTATGGCCAAGGCTTGTGTAGGAAATAGTTCAAGCCAAAGGGTTGAAAAGGAAAACGAAGAAGAAGAAATGCAAACCAATGATCATCAGTGGCGTTGA Coding sequence (CDS)
ATGTCTTTCAAGCCAAGCAAATCCCACGATGAATTTGAAAGAGTTTGTTCCGACAGTCCTATGTCGGAACAAGCTAAACTCAACCCTATGGCCAAGGCTTGTGTAGGAAATAGTTCAAGCCAAAGGGTTGAAAAGGAAAACGAAGAAGAAGAAATGCAAACCAATGATCATCAGTGGCGTTGA Protein sequence
MSFKPSKSHDEFERVCSDSPMSEQAKLNPMAKACVGNSSSQRVEKENEEEEMQTNDHQWR
Homology
BLAST of IVF0022996 vs. NCBI nr
Match:
KGN57698.1 (hypothetical protein Csa_009837 [Cucumis sativus])
HSP 1 Score: 46.6 bits (109), Expect = 1.93e-04
Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 0
Query: 1 MSFKPSKSHDEFERVCSDSPMSEQAKLNPMAKACVGNSSSQRVEKE 46 +S KPSKSHDEFE+V + MSEQAK+N M G SS+Q VE E Sbjct: 7 ISTKPSKSHDEFEKVRFEITMSEQAKVNTMIHDSEGTSSNQGVETE 52
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
KGN57698.1 1.93e-04 58.70 hypothetical protein Csa_009837 [Cucumis sativus] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
A T G T C T T T C A A G C C A A G C A A A T C C C A C G A T G A A T T T G A A A G A G T T T G T T C C G A C A G T C C T A T G T C G G A A C A A G C T A A A C T C A A C C C T A T G G C C A A G G C T T G T G T A G G A A A T A G T T C A A G C C A A A G G G T T G A A A A G G A A A A C G A A G A A G A A G A A A T G C A A A C C A A T G A T C A T C A G T G G C G T T G A 20 40 60 80 100 120 140 160 180 Score = Score = Score = Sequence mobidb-lite mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..60
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 42..60
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..17
Relationships
The following mRNA feature(s) are a part of this gene: