IVF0022961 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAATGTGGATTTTTCACCTCGGAACCGTGATCAGGACTGTGGAACACCATACAAAGATAGATTTGACAAATTTGATAAGTTTGTGAGGTGTCATGAATGTGAGGGACACGTACACATTCAAGCGGAATGCACCATCTATTTGAAGAGAAAGAAGAAGATTCTCAACATCACTTTGTCAGATGAAGACACGACGTCAGACAGTGAGTGTGAAGACTACGGTAGAGCGTTAATCAGTTGTGAAGCTGAAGGAAGTTTAGAACTACTGAGTAATGATGAATTGCTACTTCAAGCAGTCATATAA ATGGAAAATGTGGATTTTTCACCTCGGAACCGTGATCAGGACTGTGGAACACCATACAAAGATAGATTTGACAAATTTGATAAGTTTGTGAGGTGTCATGAATGTGAGGGACACGTACACATTCAAGCGGAATGCACCATCTATTTGAAGAGAAAGAAGAAGATTCTCAACATCACTTTGTCAGATGAAGACACGACGTCAGACAGTGAGTGTGAAGACTACGGTAGAGCGTTAATCAGTTGTGAAGCTGAAGGAAGTTTAGAACTACTGAGTAATGATGAATTGCTACTTCAAGCAGTCATATAA ATGGAAAATGTGGATTTTTCACCTCGGAACCGTGATCAGGACTGTGGAACACCATACAAAGATAGATTTGACAAATTTGATAAGTTTGTGAGGTGTCATGAATGTGAGGGACACGTACACATTCAAGCGGAATGCACCATCTATTTGAAGAGAAAGAAGAAGATTCTCAACATCACTTTGTCAGATGAAGACACGACGTCAGACAGTGAGTGTGAAGACTACGGTAGAGCGTTAATCAGTTGTGAAGCTGAAGGAAGTTTAGAACTACTGAGTAATGATGAATTGCTACTTCAAGCAGTCATATAA MENVDFSPRNRDQDCGTPYKDRFDKFDKFVRCHECEGHVHIQAECTIYLKRKKKILNITLSDEDTTSDSECEDYGRALISCEAEGSLELLSNDELLLQAVI Homology
BLAST of IVF0022961 vs. ExPASy TrEMBL
Match: A0A5A7VIA1 (Putative envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001480 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 2.9e-51 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of IVF0022961 vs. ExPASy TrEMBL
Match: A0A5D3C137 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00680 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.7e-35 Identity = 76/99 (76.77%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of IVF0022961 vs. ExPASy TrEMBL
Match: A0A5D3CEG7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001620 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 3.3e-31 Identity = 71/100 (71.00%), Postives = 81/100 (81.00%), Query Frame = 0
BLAST of IVF0022961 vs. ExPASy TrEMBL
Match: A0A5D3BG63 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00170 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 5.6e-23 Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 0
BLAST of IVF0022961 vs. ExPASy TrEMBL
Match: A0A5A7VGI8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00050 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.4e-18 Identity = 52/82 (63.41%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of IVF0022961 vs. NCBI nr
Match: KAA0065461.1 (putative envelope-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 211 bits (537), Expect = 3.49e-68 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of IVF0022961 vs. NCBI nr
Match: KAA0047417.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK04126.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 159 bits (401), Expect = 4.67e-46 Identity = 76/99 (76.77%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of IVF0022961 vs. NCBI nr
Match: KAA0043625.1 (uncharacterized protein E6C27_scaffold320G00680 [Cucumis melo var. makuwa] >TYK09740.1 uncharacterized protein E5676_scaffold447G001620 [Cucumis melo var. makuwa]) HSP 1 Score: 144 bits (364), Expect = 9.58e-41 Identity = 71/100 (71.00%), Postives = 81/100 (81.00%), Query Frame = 0
BLAST of IVF0022961 vs. NCBI nr
Match: TYJ98064.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 117 bits (293), Expect = 2.82e-29 Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 0
BLAST of IVF0022961 vs. NCBI nr
Match: KAA0067203.1 (uncharacterized protein E6C27_scaffold418G00050 [Cucumis melo var. makuwa]) HSP 1 Score: 102 bits (253), Expect = 6.22e-26 Identity = 52/82 (63.41%), Postives = 59/82 (71.95%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|