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IVF0022890 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAATAATTGTGCTTCCAAAAGGAAATAGACTTTGTAGGGCCACGGGTTTGGAGTAGTTCCACTCTCCAATCCTCACCCGGAACACAAAATAGCCCAAACCATGCTCCGTCTTCAATGGCTTTCTTCTTCCTTGCTTCCCACATTCAACCCCGAACTCTCCCCGGAAACCTTATCCAACCCCAGACTTTGTAGTCTCAACTTCCGTCGCCCACTCCTCACTCTCACTACTACACGCAAACCTTCTCCAAAATGCCAATACTCCTGGAACACGCACCAGCACCAACAATCATCCTTCGAACCGGCCTCTCAGACCGATTCCTTTTCCCCACAGTCCCGTGCCGGAGGTACTTCCTTCCCTCTTTCACTTTGTTTGACCCTGTATGGACTTCATTGTTTTTACCTTGTTCTCTTCTTCAGAGGGCTTCTCCTAATTCAAGGGTTTTTTTTTCTTAGGTTCTTTGTTTCTTTTGTGTTCGTTGTTTTTTATTTATTGGGTTCTGAAGTATTATGGTTTGGCTTGTTACTAGCTGCTGCTGCATTGCCTCCGAGGTTTTTTGTTGGTCATTCGATATACAAAGGGAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCAGAGTTTACACCTCTAGATGTATGTTTGACTTGAATTCTTAGCTTTGTTGTACTTCATGATATGCTATTTTTCTTTACAGTTAATTTTTTGAAGTTATTAATCGTTTAAAATTTGTCAGTCAGGAGCGTTCAAAATATCCAGGGAAGGATTGGTTATGCTTCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTGTTTCAATACGAACTGATAGCTAACTCCTCTTGTTATGCAAGCTTCTGAAATCTGAATTAATGAGTTAAACTGAAGTTCTAGGTTAATGTTGCTGACTACTATTCCAAAGGCACCATATTTGGCATCTTAGAGGTGTGGAAAAGTAGTATCATTTCCTTGATGGAGTAGATGGTATTGAAAGTACCAATGCATGTTCGTGGAGCTGTTTACAACAATCATTTTTCTGTTTTCTAAAATCAAACTATTTGTAAGAAGGAAGAACGATAATTGGATGATGTGTTGTAAAGGTTAAGATCATTACGCATGTGAAATCACTTTTTTATTATTTGTTTTTGAAATCAGAACAATTTGAGTCGTTCTCAATAAAATGTTACTACAAGAATAAACTAAATCAGACACAGAGATGAATTTTTGTTGAATTTCTTAGGTTGGCTTTTTATAATCATTATTTGATACCTCACCGAATTAGATTACACTTTGTTTTGTATATAGGTATTCTCATTATCAGTGACAGAATTGGGAAGTCTCATTGCCCTTGGCCCACGTGAGGCTTGTGAATTTTTTCACGACCCCTATAAGGGAAAAAGGTATTATTTTTTACAAGTACAATCAAAATTTAAACTTTTAGTTGTGCCATTTTCATTGTCTGTGTTTTGTGCATCTTTGGCAACCACAAACATCTATACCATCGTCTGGCCAAGTATGCTTTCTCATATCTGAGAATTGCATGATTGTGTTGCACCAAACATGGAAAACATTGATGTCTTGATCCTTTTGGTAGCCATATACCCACATCTATCTTGCATGTACATGCTGCCAAGTAAAATGTTTTTTACGTCATAAGTTGTTTGTAAACAAAGCTTTGCAGGTTTGAAAACATAGTATATTATGATAACAAGAGACGGCAAAATATTTGTTCTGTAGTGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCGGATGGTTCTGGTCATTTCTTCAATCTCAGTAAGTCTTGTATTGAACCGTTTATGATCTATTTGACACTAAATGTAAATGCTGAAGTCTGTCTCGTAGGTCTTCAGTTGAAGAAAGCGTATATGTTGCCTCCAACAGAATTTAATCAGTTGGAAGCATTTGTGTCTCATTTACATGTGTCATTTTATTTTCGAAACCCCTTGATAATATCACCATTGTTTTTCCCCTTAACCTTCCATTTGTATCTTCAATTATGATGATGGTTTTTAATAGATTAATAAACTTCCTATCAAATACACGTGCTCTAGAAGAGGCGAGAGAATTAGTGTATGATAAGTTAGTATCCATTATTCATGAGGGGGTGCATCTTTAGTACAGATGGAGCCGTGTGTGCTGCGTCATTAGAATGATTTGTTGATTATCTTTGATTATATTTAATTCAATGGATTTTCAATTTCAATTGTCCTGCTTTAGTCTGATTCTTTATTAGATATCTGAAATAGTCTTGAGAGATTTACCTTTTGGTTTGCTTATTTCAAAGTTCAATAAACAATCTACACGCAACGGGACTTGATTTTTTCTTTTTTAAGTTCTTTCTTCGGATAGCATTGATCCTGTGAACAGCAATGCTATTAGAGAAAGTCTACTGTTTCTACCTCCTTAACTTTTCTGTTCTATTTTGCTGCACAAGGCGTTCAGAACAAGCTAATCAACGTGGACGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGGTATAGTCCTTCCCCGTTCACATTCTCACTCACTTCTTCTAAACCCCCTTTGTTATATTCATGTACATTTATACCACTAGGCCAATCTACGAAGGTTGACATCAACCTTGTTTTTCCTCCAAATTGTGTGACTATAACTCGTTAATGGGATGTTTAAAGATACGTTTCTGATACGTGCGAATTCATTATTCTGTAGTTTATCTTGCCGCACCTCATGGGTTGGCATACAATTGCAAACACCATGACGAAGCCTGAAGATAGCAGCCGAGGAAATACCGCCAATCCCAGATATGGAGGTGACTTTGAATGGAACAGATAGTCTCTACTTTTTCTAGGCTGAAGATGATTGTTGTGCTTATTTCAGTTATCCTGATCAAAATAGTTAGCTAATCACCTTTTGTAATCTATGGGTCCACGTTTTTTAATATATCTCTAAACCTTAAATATACATATATGGAAGTTACATTAGTTATTGCACC ATAAATAATTGTGCTTCCAAAAGGAAATAGACTTTGTAGGGCCACGGGTTTGGAGTAGTTCCACTCTCCAATCCTCACCCGGAACACAAAATAGCCCAAACCATGCTCCGTCTTCAATGGCTTTCTTCTTCCTTGCTTCCCACATTCAACCCCGAACTCTCCCCGGAAACCTTATCCAACCCCAGACTTTGTAGTCTCAACTTCCGTCGCCCACTCCTCACTCTCACTACTACACGCAAACCTTCTCCAAAATGCCAATACTCCTGGAACACGCACCAGCACCAACAATCATCCTTCGAACCGGCCTCTCAGACCGATTCCTTTTCCCCACAGTCCCGTGCCGGAGCTGCTGCTGCATTGCCTCCGAGGTTTTTTGTTGGTCATTCGATATACAAAGGGAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCAGAGTTTACACCTCTAGATTCAGGAGCGTTCAAAATATCCAGGGAAGGATTGGTTATGCTTCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTATTCTCATTATCAGTGACAGAATTGGGAAGTCTCATTGCCCTTGGCCCACGTGAGGCTTGTGAATTTTTTCACGACCCCTATAAGGGAAAAAGTGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCGGATGGTTCTGGTCATTTCTTCAATCTCAGCGTTCAGAACAAGCTAATCAACGTGGACGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGTTTATCTTGCCGCACCTCATGGGTTGGCATACAATTGCAAACACCATGACGAAGCCTGAAGATAGCAGCCGAGGAAATACCGCCAATCCCAGATATGGAGGTGACTTTGAATGGAACAGATAGTCTCTACTTTTTCTAGGCTGAAGATGATTGTTGTGCTTATTTCAGTTATCCTGATCAAAATAGTTAGCTAATCACCTTTTGTAATCTATGGGTCCACGTTTTTTAATATATCTCTAAACCTTAAATATACATATATGGAAGTTACATTAGTTATTGCACC ATGCTCCGTCTTCAATGGCTTTCTTCTTCCTTGCTTCCCACATTCAACCCCGAACTCTCCCCGGAAACCTTATCCAACCCCAGACTTTGTAGTCTCAACTTCCGTCGCCCACTCCTCACTCTCACTACTACACGCAAACCTTCTCCAAAATGCCAATACTCCTGGAACACGCACCAGCACCAACAATCATCCTTCGAACCGGCCTCTCAGACCGATTCCTTTTCCCCACAGTCCCGTGCCGGAGCTGCTGCTGCATTGCCTCCGAGGTTTTTTGTTGGTCATTCGATATACAAAGGGAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCAGAGTTTACACCTCTAGATTCAGGAGCGTTCAAAATATCCAGGGAAGGATTGGTTATGCTTCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTATTCTCATTATCAGTGACAGAATTGGGAAGTCTCATTGCCCTTGGCCCACGTGAGGCTTGTGAATTTTTTCACGACCCCTATAAGGGAAAAAGTGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCGGATGGTTCTGGTCATTTCTTCAATCTCAGCGTTCAGAACAAGCTAATCAACGTGGACGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGTTTATCTTGCCGCACCTCATGGGTTGGCATACAATTGCAAACACCATGACGAAGCCTGAAGATAGCAGCCGAGGAAATACCGCCAATCCCAGATATGGAGGTGACTTTGAATGGAACAGATAG MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQHQQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR Homology
BLAST of IVF0022890 vs. ExPASy Swiss-Prot
Match: Q9M9S3 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WHY1 PE=1 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 1.5e-88 Identity = 156/228 (68.42%), Postives = 188/228 (82.46%), Query Frame = 0
BLAST of IVF0022890 vs. ExPASy Swiss-Prot
Match: Q66GR6 (Single-stranded DNA-binding protein WHY3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WHY3 PE=1 SV=1) HSP 1 Score: 317.0 bits (811), Expect = 2.1e-85 Identity = 153/226 (67.70%), Postives = 183/226 (80.97%), Query Frame = 0
BLAST of IVF0022890 vs. ExPASy Swiss-Prot
Match: Q9LL85 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=4113 GN=WHY1 PE=1 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 3.5e-85 Identity = 161/262 (61.45%), Postives = 193/262 (73.66%), Query Frame = 0
BLAST of IVF0022890 vs. ExPASy Swiss-Prot
Match: B2LXS7 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=WHY1 PE=2 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 6.1e-69 Identity = 122/204 (59.80%), Postives = 155/204 (75.98%), Query Frame = 0
BLAST of IVF0022890 vs. ExPASy Swiss-Prot
Match: Q8VYF7 (Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WHY2 PE=1 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 2.1e-45 Identity = 95/211 (45.02%), Postives = 136/211 (64.45%), Query Frame = 0
BLAST of IVF0022890 vs. ExPASy TrEMBL
Match: A0A5D3BP35 (Single-stranded DNA-binding protein WHY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00810 PE=3 SV=1) HSP 1 Score: 559.7 bits (1441), Expect = 6.8e-156 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0
BLAST of IVF0022890 vs. ExPASy TrEMBL
Match: A0A1S3C3B0 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103496412 PE=3 SV=1) HSP 1 Score: 559.7 bits (1441), Expect = 6.8e-156 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0
BLAST of IVF0022890 vs. ExPASy TrEMBL
Match: A0A0A0KG25 (WHY1 OS=Cucumis sativus OX=3659 GN=Csa_6G404240 PE=2 SV=1) HSP 1 Score: 525.8 bits (1353), Expect = 1.1e-145 Identity = 260/276 (94.20%), Postives = 264/276 (95.65%), Query Frame = 0
BLAST of IVF0022890 vs. ExPASy TrEMBL
Match: A0A6J1KPI3 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111496070 PE=3 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 1.7e-130 Identity = 235/277 (84.84%), Postives = 249/277 (89.89%), Query Frame = 0
BLAST of IVF0022890 vs. ExPASy TrEMBL
Match: A0A6J1DD66 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111019296 PE=3 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129 Identity = 235/277 (84.84%), Postives = 247/277 (89.17%), Query Frame = 0
BLAST of IVF0022890 vs. NCBI nr
Match: XP_008456468.1 (PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucumis melo] >KAA0036450.1 single-stranded DNA-binding protein WHY1 [Cucumis melo var. makuwa] >TYK00036.1 single-stranded DNA-binding protein WHY1 [Cucumis melo var. makuwa]) HSP 1 Score: 554 bits (1427), Expect = 5.24e-199 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0
BLAST of IVF0022890 vs. NCBI nr
Match: XP_011657483.1 (single-stranded DNA-binding protein WHY1, chloroplastic [Cucumis sativus] >KGN47809.1 hypothetical protein Csa_003431 [Cucumis sativus] >QED11101.1 WHY1 [Cucumis sativus]) HSP 1 Score: 520 bits (1339), Expect = 1.53e-185 Identity = 260/276 (94.20%), Postives = 264/276 (95.65%), Query Frame = 0
BLAST of IVF0022890 vs. NCBI nr
Match: XP_038884311.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X2 [Benincasa hispida]) HSP 1 Score: 489 bits (1259), Expect = 1.91e-173 Identity = 246/274 (89.78%), Postives = 255/274 (93.07%), Query Frame = 0
BLAST of IVF0022890 vs. NCBI nr
Match: XP_038884310.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X1 [Benincasa hispida]) HSP 1 Score: 484 bits (1247), Expect = 1.33e-171 Identity = 246/275 (89.45%), Postives = 255/275 (92.73%), Query Frame = 0
BLAST of IVF0022890 vs. NCBI nr
Match: XP_023546045.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 470 bits (1210), Expect = 6.01e-166 Identity = 237/273 (86.81%), Postives = 248/273 (90.84%), Query Frame = 0
BLAST of IVF0022890 vs. TAIR 10
Match: AT1G14410.1 (ssDNA-binding transcriptional regulator ) HSP 1 Score: 327.4 bits (838), Expect = 1.1e-89 Identity = 156/228 (68.42%), Postives = 188/228 (82.46%), Query Frame = 0
BLAST of IVF0022890 vs. TAIR 10
Match: AT2G02740.2 (ssDNA-binding transcriptional regulator ) HSP 1 Score: 320.1 bits (819), Expect = 1.7e-87 Identity = 152/225 (67.56%), Postives = 182/225 (80.89%), Query Frame = 0
BLAST of IVF0022890 vs. TAIR 10
Match: AT2G02740.1 (ssDNA-binding transcriptional regulator ) HSP 1 Score: 317.0 bits (811), Expect = 1.5e-86 Identity = 153/226 (67.70%), Postives = 183/226 (80.97%), Query Frame = 0
BLAST of IVF0022890 vs. TAIR 10
Match: AT1G71260.1 (WHIRLY 2 ) HSP 1 Score: 184.1 bits (466), Expect = 1.5e-46 Identity = 95/211 (45.02%), Postives = 136/211 (64.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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