IVF0022890 (gene) Melon (IVF77) v1

Overview


Name	IVF0022890
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	single-stranded DNA-binding protein WHY1, chloroplastic-like
Location	chr03: 20767252 .. 20770307 (-)
RNA-Seq Expression	IVF0022890
Synteny	IVF0022890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAATAATTGTGCTTCCAAAAGGAAATAGACTTTGTAGGGCCACGGGTTTGGAGTAGTTCCACTCTCCAATCCTCACCCGGAACACAAAATAGCCCAAACCATGCTCCGTCTTCAATGGCTTTCTTCTTCCTTGCTTCCCACATTCAACCCCGAACTCTCCCCGGAAACCTTATCCAACCCCAGACTTTGTAGTCTCAACTTCCGTCGCCCACTCCTCACTCTCACTACTACACGCAAACCTTCTCCAAAATGCCAATACTCCTGGAACACGCACCAGCACCAACAATCATCCTTCGAACCGGCCTCTCAGACCGATTCCTTTTCCCCACAGTCCCGTGCCGGAGGTACTTCCTTCCCTCTTTCACTTTGTTTGACCCTGTATGGACTTCATTGTTTTTACCTTGTTCTCTTCTTCAGAGGGCTTCTCCTAATTCAAGGGTTTTTTTTTCTTAGGTTCTTTGTTTCTTTTGTGTTCGTTGTTTTTTATTTATTGGGTTCTGAAGTATTATGGTTTGGCTTGTTACTAGCTGCTGCTGCATTGCCTCCGAGGTTTTTTGTTGGTCATTCGATATACAAAGGGAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCAGAGTTTACACCTCTAGATGTATGTTTGACTTGAATTCTTAGCTTTGTTGTACTTCATGATATGCTATTTTTCTTTACAGTTAATTTTTTGAAGTTATTAATCGTTTAAAATTTGTCAGTCAGGAGCGTTCAAAATATCCAGGGAAGGATTGGTTATGCTTCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTGTTTCAATACGAACTGATAGCTAACTCCTCTTGTTATGCAAGCTTCTGAAATCTGAATTAATGAGTTAAACTGAAGTTCTAGGTTAATGTTGCTGACTACTATTCCAAAGGCACCATATTTGGCATCTTAGAGGTGTGGAAAAGTAGTATCATTTCCTTGATGGAGTAGATGGTATTGAAAGTACCAATGCATGTTCGTGGAGCTGTTTACAACAATCATTTTTCTGTTTTCTAAAATCAAACTATTTGTAAGAAGGAAGAACGATAATTGGATGATGTGTTGTAAAGGTTAAGATCATTACGCATGTGAAATCACTTTTTTATTATTTGTTTTTGAAATCAGAACAATTTGAGTCGTTCTCAATAAAATGTTACTACAAGAATAAACTAAATCAGACACAGAGATGAATTTTTGTTGAATTTCTTAGGTTGGCTTTTTATAATCATTATTTGATACCTCACCGAATTAGATTACACTTTGTTTTGTATATAGGTATTCTCATTATCAGTGACAGAATTGGGAAGTCTCATTGCCCTTGGCCCACGTGAGGCTTGTGAATTTTTTCACGACCCCTATAAGGGAAAAAGGTATTATTTTTTACAAGTACAATCAAAATTTAAACTTTTAGTTGTGCCATTTTCATTGTCTGTGTTTTGTGCATCTTTGGCAACCACAAACATCTATACCATCGTCTGGCCAAGTATGCTTTCTCATATCTGAGAATTGCATGATTGTGTTGCACCAAACATGGAAAACATTGATGTCTTGATCCTTTTGGTAGCCATATACCCACATCTATCTTGCATGTACATGCTGCCAAGTAAAATGTTTTTTACGTCATAAGTTGTTTGTAAACAAAGCTTTGCAGGTTTGAAAACATAGTATATTATGATAACAAGAGACGGCAAAATATTTGTTCTGTAGTGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCGGATGGTTCTGGTCATTTCTTCAATCTCAGTAAGTCTTGTATTGAACCGTTTATGATCTATTTGACACTAAATGTAAATGCTGAAGTCTGTCTCGTAGGTCTTCAGTTGAAGAAAGCGTATATGTTGCCTCCAACAGAATTTAATCAGTTGGAAGCATTTGTGTCTCATTTACATGTGTCATTTTATTTTCGAAACCCCTTGATAATATCACCATTGTTTTTCCCCTTAACCTTCCATTTGTATCTTCAATTATGATGATGGTTTTTAATAGATTAATAAACTTCCTATCAAATACACGTGCTCTAGAAGAGGCGAGAGAATTAGTGTATGATAAGTTAGTATCCATTATTCATGAGGGGGTGCATCTTTAGTACAGATGGAGCCGTGTGTGCTGCGTCATTAGAATGATTTGTTGATTATCTTTGATTATATTTAATTCAATGGATTTTCAATTTCAATTGTCCTGCTTTAGTCTGATTCTTTATTAGATATCTGAAATAGTCTTGAGAGATTTACCTTTTGGTTTGCTTATTTCAAAGTTCAATAAACAATCTACACGCAACGGGACTTGATTTTTTCTTTTTTAAGTTCTTTCTTCGGATAGCATTGATCCTGTGAACAGCAATGCTATTAGAGAAAGTCTACTGTTTCTACCTCCTTAACTTTTCTGTTCTATTTTGCTGCACAAGGCGTTCAGAACAAGCTAATCAACGTGGACGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGGTATAGTCCTTCCCCGTTCACATTCTCACTCACTTCTTCTAAACCCCCTTTGTTATATTCATGTACATTTATACCACTAGGCCAATCTACGAAGGTTGACATCAACCTTGTTTTTCCTCCAAATTGTGTGACTATAACTCGTTAATGGGATGTTTAAAGATACGTTTCTGATACGTGCGAATTCATTATTCTGTAGTTTATCTTGCCGCACCTCATGGGTTGGCATACAATTGCAAACACCATGACGAAGCCTGAAGATAGCAGCCGAGGAAATACCGCCAATCCCAGATATGGAGGTGACTTTGAATGGAACAGATAGTCTCTACTTTTTCTAGGCTGAAGATGATTGTTGTGCTTATTTCAGTTATCCTGATCAAAATAGTTAGCTAATCACCTTTTGTAATCTATGGGTCCACGTTTTTTAATATATCTCTAAACCTTAAATATACATATATGGAAGTTACATTAGTTATTGCACC

mRNA sequence

ATAAATAATTGTGCTTCCAAAAGGAAATAGACTTTGTAGGGCCACGGGTTTGGAGTAGTTCCACTCTCCAATCCTCACCCGGAACACAAAATAGCCCAAACCATGCTCCGTCTTCAATGGCTTTCTTCTTCCTTGCTTCCCACATTCAACCCCGAACTCTCCCCGGAAACCTTATCCAACCCCAGACTTTGTAGTCTCAACTTCCGTCGCCCACTCCTCACTCTCACTACTACACGCAAACCTTCTCCAAAATGCCAATACTCCTGGAACACGCACCAGCACCAACAATCATCCTTCGAACCGGCCTCTCAGACCGATTCCTTTTCCCCACAGTCCCGTGCCGGAGCTGCTGCTGCATTGCCTCCGAGGTTTTTTGTTGGTCATTCGATATACAAAGGGAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCAGAGTTTACACCTCTAGATTCAGGAGCGTTCAAAATATCCAGGGAAGGATTGGTTATGCTTCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTATTCTCATTATCAGTGACAGAATTGGGAAGTCTCATTGCCCTTGGCCCACGTGAGGCTTGTGAATTTTTTCACGACCCCTATAAGGGAAAAAGTGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCGGATGGTTCTGGTCATTTCTTCAATCTCAGCGTTCAGAACAAGCTAATCAACGTGGACGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGTTTATCTTGCCGCACCTCATGGGTTGGCATACAATTGCAAACACCATGACGAAGCCTGAAGATAGCAGCCGAGGAAATACCGCCAATCCCAGATATGGAGGTGACTTTGAATGGAACAGATAGTCTCTACTTTTTCTAGGCTGAAGATGATTGTTGTGCTTATTTCAGTTATCCTGATCAAAATAGTTAGCTAATCACCTTTTGTAATCTATGGGTCCACGTTTTTTAATATATCTCTAAACCTTAAATATACATATATGGAAGTTACATTAGTTATTGCACC

Coding sequence (CDS)

ATGCTCCGTCTTCAATGGCTTTCTTCTTCCTTGCTTCCCACATTCAACCCCGAACTCTCCCCGGAAACCTTATCCAACCCCAGACTTTGTAGTCTCAACTTCCGTCGCCCACTCCTCACTCTCACTACTACACGCAAACCTTCTCCAAAATGCCAATACTCCTGGAACACGCACCAGCACCAACAATCATCCTTCGAACCGGCCTCTCAGACCGATTCCTTTTCCCCACAGTCCCGTGCCGGAGCTGCTGCTGCATTGCCTCCGAGGTTTTTTGTTGGTCATTCGATATACAAAGGGAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCAGAGTTTACACCTCTAGATTCAGGAGCGTTCAAAATATCCAGGGAAGGATTGGTTATGCTTCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTATTCTCATTATCAGTGACAGAATTGGGAAGTCTCATTGCCCTTGGCCCACGTGAGGCTTGTGAATTTTTTCACGACCCCTATAAGGGAAAAAGTGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCGGATGGTTCTGGTCATTTCTTCAATCTCAGCGTTCAGAACAAGCTAATCAACGTGGACGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGTTTATCTTGCCGCACCTCATGGGTTGGCATACAATTGCAAACACCATGACGAAGCCTGAAGATAGCAGCCGAGGAAATACCGCCAATCCCAGATATGGAGGTGACTTTGAATGGAACAGATAG

Protein sequence

MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQHQQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR

Homology

[Close]

BLAST of IVF0022890 vs. ExPASy Swiss-Prot
Match: Q9M9S3 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WHY1 PE=1 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.5e-88
Identity = 156/228 (68.42%), Postives = 188/228 (82.46%), Query Frame = 0


Query: 46  KPSPKCQYSWNTHQHQQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTV 105
           KP+ K    ++    Q   FE     DS S  S    A  LP RF+VGHSIYKGKAALTV
Sbjct: 40  KPTTKTVKLFSVKSRQTDYFEKQRFGDSSSSPS---PAEGLPARFYVGHSIYKGKAALTV 99

Query: 106 EPRPPEFTPLDSGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPR 165
           +PR PEF  LDSGAFK+S++G ++LQFAP+AGVRQYDWS+KQVFSLSVTE+G+L++LGPR
Sbjct: 100 DPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPR 159

Query: 166 EACEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEY 225
           E+CEFFHDP+KGKSDEGKVRK+LKVEPLPDGSGHFFNLSVQNKL+NVDESIYIPIT+AE+
Sbjct: 160 ESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEF 219

Query: 226 TVLVEAFKFILPHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
            VL+ AF F+LP+L+GWH  AN++ KPE++SR N A+P YGGD+EWNR
Sbjct: 220 AVLISAFNFVLPYLIGWHAFANSI-KPEETSRVNNASPNYGGDYEWNR 263

[Close]

BLAST of IVF0022890 vs. ExPASy Swiss-Prot
Match: Q66GR6 (Single-stranded DNA-binding protein WHY3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WHY3 PE=1 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.1e-85
Identity = 153/226 (67.70%), Postives = 183/226 (80.97%), Query Frame = 0


Query: 49  PKCQYSWNTHQHQQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPR 108
           P  +        Q   FE     DS S Q+    A    PRF+VGHSIYKGKAALT+EPR
Sbjct: 48  PTARLKLTVKSRQSDYFEKQRFGDSSSSQN----AEVSSPRFYVGHSIYKGKAALTIEPR 107

Query: 109 PPEFTPLDSGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREAC 168
            PEF  L+SGAFK+++EG ++LQFAPAAGVRQYDWSRKQVFSLSVTE+G+L++LGPRE+C
Sbjct: 108 APEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESC 167

Query: 169 EFFHDPYKGK-SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTV 228
           EFFHDP+KGK SDEGKVRK+LKVEPLPDGSG FFNLSVQNKL+NVDES+YIPITKAE+ V
Sbjct: 168 EFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAV 227

Query: 229 LVEAFKFILPHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           L+ AF F+LPHL+GW   AN++ KPEDS+R N A+P+YGGD+EW+R
Sbjct: 228 LISAFNFVLPHLIGWSAFANSI-KPEDSNRLNNASPKYGGDYEWSR 268

[Close]

BLAST of IVF0022890 vs. ExPASy Swiss-Prot
Match: Q9LL85 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=4113 GN=WHY1 PE=1 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.5e-85
Identity = 161/262 (61.45%), Postives = 193/262 (73.66%), Query Frame = 0


Query: 24  LSNPRLCS-LNFRRPLLTLTTTRKPSPKCQYSWNTHQ-----------HQQSSFEPASQT 83
           L NP   S L+F   + T+      +    +S  TH+                FEP  Q 
Sbjct: 18  LQNPTKTSYLSFSSSINTIFAPLSSNTTKSFSGLTHKAALPRNLSLTCRHSDYFEPQQQ- 77

Query: 84  DSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGLVMLQ 143
                Q +     A  P+ FVG+SIYKGKAALTVEPR PEF+PLDSGAFK+SREG+VMLQ
Sbjct: 78  ---QQQQQQQPQGASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQ 137

Query: 144 FAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSDEGKVRKILKVE 203
           FAPAAGVRQYDWSRKQVFSLSVTE+GS+I+LG +++CEFFHDP KG+SDEG+VRK+LKVE
Sbjct: 138 FAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVLKVE 197

Query: 204 PLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTMTK 263
           PLPDGSGHFFNLSVQNKLIN+DE+IYIP+TKAE+ VLV AF F++P+L+GWHT  N+  K
Sbjct: 198 PLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSF-K 257

Query: 264 PEDSSRGNTANPRYGGDFEWNR 274
           PED+SR N ANPR G + EWNR
Sbjct: 258 PEDASRSNNANPRSGAELEWNR 274

[Close]

BLAST of IVF0022890 vs. ExPASy Swiss-Prot
Match: B2LXS7 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=WHY1 PE=2 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 6.1e-69
Identity = 122/204 (59.80%), Postives = 155/204 (75.98%), Query Frame = 0


Query: 76  PQSRAGAAAALPP------RFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGLVM 135
           P  R       PP      R F  +SIYKGKAAL+ +PRPP F PLDSGA+K+++EG V+
Sbjct: 66  PPPRGDGGYGRPPNGAQDGRVFTSYSIYKGKAALSFDPRPPLFVPLDSGAYKVAKEGFVL 125

Query: 136 LQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSDEGKVRKILK 195
           LQFAPA   RQYDW+RKQVFSLSV E+G+L+ LGP ++CEFFHDP+KG+S+EGKVRK+LK
Sbjct: 126 LQFAPAVATRQYDWTRKQVFSLSVWEIGTLLTLGPTDSCEFFHDPFKGRSEEGKVRKVLK 185

Query: 196 VEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTM 255
           +EP PDG+G FFNLSVQN+LINVDESIYIPITK E+ V+V  F +I+PHLMGW T  +++
Sbjct: 186 IEPTPDGNGRFFNLSVQNRLINVDESIYIPITKGEFAVIVSTFNYIIPHLMGWSTFVSSI 245

Query: 256 TKPEDSSRGNTANPRYGGDFEWNR 274
            KPE+S     + P+   ++EW R
Sbjct: 246 -KPEESR--PYSRPQSTSEYEWRR 266

[Close]

BLAST of IVF0022890 vs. ExPASy Swiss-Prot
Match: Q8VYF7 (Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WHY2 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.1e-45
Identity = 95/211 (45.02%), Postives = 136/211 (64.45%), Query Frame = 0


Query: 68  ASQTDSFSP-QSRAGAAAALPP-RFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISRE 127
           AS ++S +P +   G  AA P  R F  +SI+KGKAAL+VEP  P FT +DSG  +I R 
Sbjct: 30  ASWSNSSTPGRGFPGKDAAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRR 89

Query: 128 GLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSDEGKVR 187
           G +M+ F PA G R+YDW +KQ F+LS TE+GSLI++G +++ EFFHDP    S+ G+VR
Sbjct: 90  GSLMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVR 149

Query: 188 KILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTI 247
           K L V+P  DGSG+F +LSV N ++  ++   +P+TKAE+ V+  AF F LPH+MGW+ +
Sbjct: 150 KSLSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRL 209

Query: 248 ---ANTMTKPEDSSRGNTANPRYGGDFEWNR 274
               NT   P  +       P+   + EW++
Sbjct: 210 TGHVNTEALPSRNVSHLKTEPQL--ELEWDK 238

[Close]

BLAST of IVF0022890 vs. ExPASy TrEMBL
Match: A0A5D3BP35 (Single-stranded DNA-binding protein WHY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00810 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 6.8e-156
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60
           MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH
Sbjct: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60

Query: 61  QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120
           QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF
Sbjct: 61  QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120

Query: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180
           KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD
Sbjct: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180

Query: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240
           EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM
Sbjct: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240

Query: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR
Sbjct: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273

[Close]

BLAST of IVF0022890 vs. ExPASy TrEMBL
Match: A0A1S3C3B0 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103496412 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 6.8e-156
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60
           MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH
Sbjct: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60

Query: 61  QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120
           QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF
Sbjct: 61  QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120

Query: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180
           KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD
Sbjct: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180

Query: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240
           EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM
Sbjct: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240

Query: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR
Sbjct: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273

[Close]

BLAST of IVF0022890 vs. ExPASy TrEMBL
Match: A0A0A0KG25 (WHY1 OS=Cucumis sativus OX=3659 GN=Csa_6G404240 PE=2 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.1e-145
Identity = 260/276 (94.20%), Postives = 264/276 (95.65%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60
           MLRLQ LSSS LPTFNPELSPETLSNPRLC+LNF RPL TLTTTRKP+ KCQYSWNT QH
Sbjct: 1   MLRLQCLSSSFLPTFNPELSPETLSNPRLCTLNFSRPLPTLTTTRKPTSKCQYSWNTQQH 60

Query: 61  QQSSFEPASQTDSFSPQSRAG---AAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS 120
           QQS+FEPA  TDS SPQSRAG   AAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS
Sbjct: 61  QQSAFEPAPHTDSLSPQSRAGAAAAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS 120

Query: 121 GAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKG 180
           GAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKG
Sbjct: 121 GAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKG 180

Query: 181 KSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILP 240
           KSDEGKVRKILKVEPLPDGSGHFFNL+VQNKLINVDESIYIPITKAEYTVLVEAFKFILP
Sbjct: 181 KSDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILP 240

Query: 241 HLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           HLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR
Sbjct: 241 HLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 276

[Close]

BLAST of IVF0022890 vs. ExPASy TrEMBL
Match: A0A6J1KPI3 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111496070 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.7e-130
Identity = 235/277 (84.84%), Postives = 249/277 (89.89%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQY-SWNTHQ 60
           MLRLQWLSSSLLP  NPEL  +   NPR C  N  R L TLT TRKPSPKCQY SWNT  
Sbjct: 1   MLRLQWLSSSLLPPLNPELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNT-- 60

Query: 61  HQQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGA 120
            QQ +FEPASQTDS+SPQ+RAGAAAALPPRFFVGHSIYKGKAAL++EPRPPEFTP+DSGA
Sbjct: 61  -QQPAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGA 120

Query: 121 FKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKS 180
           FK+SR+G VMLQ APAAGVRQYDWSRKQVFSLS+TELGSL+ALGPRE+CEFFHDPYKGKS
Sbjct: 121 FKVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKS 180

Query: 181 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL 240
           DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL
Sbjct: 181 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL 240

Query: 241 MGWHTIANTMTKPEDSSRGNTANPRYG---GDFEWNR 274
           MGWHTIANTM +PEDSSR N ANPRYG   GDFEW+R
Sbjct: 241 MGWHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 274

[Close]

BLAST of IVF0022890 vs. ExPASy TrEMBL
Match: A0A6J1DD66 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111019296 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129
Identity = 235/277 (84.84%), Postives = 247/277 (89.17%), Query Frame = 0


Query: 1   MLRLQWLSSSLL-PTFNPELSPET---LSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWN 60
           MLRLQWLSSSLL P  NPELSPET     N RLC+LN  RPLLTLT TRKPSPKCQYSW+
Sbjct: 1   MLRLQWLSSSLLPPLLNPELSPETSHLCPNRRLCTLNSSRPLLTLTATRKPSPKCQYSWS 60

Query: 61  THQHQQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLD 120
           T Q Q    EP SQ  SFSPQ+RAGAA ALPPRFFVGHSIYKGKA LTVEPRPPEFTPLD
Sbjct: 61  TQQQQPPPSEPGSQAHSFSPQTRAGAAGALPPRFFVGHSIYKGKAVLTVEPRPPEFTPLD 120

Query: 121 SGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYK 180
           SGAFK+SREG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALG R++CEFFHDPYK
Sbjct: 121 SGAFKLSREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGLRDSCEFFHDPYK 180

Query: 181 GKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFIL 240
           GKS+EGKVRKILKVEPLPDGSGHFFNLSVQNKLIN+DESIYIPITKAEYTVLVEAFKFIL
Sbjct: 181 GKSEEGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFIL 240

Query: 241 PHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           PHLMGWH I+NTMT+ EDS R N ANPRYGGDFEW+R
Sbjct: 241 PHLMGWHMISNTMTRAEDSGRVNNANPRYGGDFEWSR 277

[Close]

BLAST of IVF0022890 vs. NCBI nr
Match: XP_008456468.1 (PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucumis melo] >KAA0036450.1 single-stranded DNA-binding protein WHY1 [Cucumis melo var. makuwa] >TYK00036.1 single-stranded DNA-binding protein WHY1 [Cucumis melo var. makuwa])

HSP 1 Score: 554 bits (1427), Expect = 5.24e-199
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60
           MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH
Sbjct: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60

Query: 61  QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120
           QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF
Sbjct: 61  QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120

Query: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180
           KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD
Sbjct: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180

Query: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240
           EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM
Sbjct: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240

Query: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273
           GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR
Sbjct: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273

[Close]

BLAST of IVF0022890 vs. NCBI nr
Match: XP_011657483.1 (single-stranded DNA-binding protein WHY1, chloroplastic [Cucumis sativus] >KGN47809.1 hypothetical protein Csa_003431 [Cucumis sativus] >QED11101.1 WHY1 [Cucumis sativus])

HSP 1 Score: 520 bits (1339), Expect = 1.53e-185
Identity = 260/276 (94.20%), Postives = 264/276 (95.65%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60
           MLRLQ LSSS LPTFNPELSPETLSNPRLC+LNF RPL TLTTTRKP+ KCQYSWNT QH
Sbjct: 1   MLRLQCLSSSFLPTFNPELSPETLSNPRLCTLNFSRPLPTLTTTRKPTSKCQYSWNTQQH 60

Query: 61  QQSSFEPASQTDSFSPQSRAGAAAA---LPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS 120
           QQS+FEPA  TDS SPQSRAGAAAA   LPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS
Sbjct: 61  QQSAFEPAPHTDSLSPQSRAGAAAAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS 120

Query: 121 GAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKG 180
           GAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKG
Sbjct: 121 GAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKG 180

Query: 181 KSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILP 240
           KSDEGKVRKILKVEPLPDGSGHFFNL+VQNKLINVDESIYIPITKAEYTVLVEAFKFILP
Sbjct: 181 KSDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILP 240

Query: 241 HLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273
           HLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR
Sbjct: 241 HLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 276

[Close]

BLAST of IVF0022890 vs. NCBI nr
Match: XP_038884311.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 489 bits (1259), Expect = 1.91e-173
Identity = 246/274 (89.78%), Postives = 255/274 (93.07%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60
           MLRLQWLSSSLLP+FNPEL PE+LSN RLCSLN  RPLLTL    KPSPKCQYSWNT Q 
Sbjct: 1   MLRLQWLSSSLLPSFNPELLPESLSNGRLCSLNSFRPLLTL----KPSPKCQYSWNTQQQ 60

Query: 61  QQSS-FEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGA 120
           QQ S FEP SQTDSFS Q+RA AAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGA
Sbjct: 61  QQQSPFEPGSQTDSFSSQTRARAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGA 120

Query: 121 FKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKS 180
           FKISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CEFFHDPYKGKS
Sbjct: 121 FKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKS 180

Query: 181 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL 240
           DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKF+LPHL
Sbjct: 181 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFVLPHL 240

Query: 241 MGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273
           MGWHTIANT+T+PEDS R N ANPRYGGDFEWNR
Sbjct: 241 MGWHTIANTITRPEDSIRVNNANPRYGGDFEWNR 270

[Close]

BLAST of IVF0022890 vs. NCBI nr
Match: XP_038884310.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X1 [Benincasa hispida])

HSP 1 Score: 484 bits (1247), Expect = 1.33e-171
Identity = 246/275 (89.45%), Postives = 255/275 (92.73%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60
           MLRLQWLSSSLLP+FNPEL PE+LSN RLCSLN  RPLLTL    KPSPKCQYSWNT Q 
Sbjct: 1   MLRLQWLSSSLLPSFNPELLPESLSNGRLCSLNSFRPLLTL----KPSPKCQYSWNTQQQ 60

Query: 61  QQSS-FEPASQTDSFSPQSRAG-AAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSG 120
           QQ S FEP SQTDSFS Q+RA  AAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSG
Sbjct: 61  QQQSPFEPGSQTDSFSSQTRARVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSG 120

Query: 121 AFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGK 180
           AFKISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CEFFHDPYKGK
Sbjct: 121 AFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGK 180

Query: 181 SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPH 240
           SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKF+LPH
Sbjct: 181 SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFVLPH 240

Query: 241 LMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273
           LMGWHTIANT+T+PEDS R N ANPRYGGDFEWNR
Sbjct: 241 LMGWHTIANTITRPEDSIRVNNANPRYGGDFEWNR 271

[Close]

BLAST of IVF0022890 vs. NCBI nr
Match: XP_023546045.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 470 bits (1210), Expect = 6.01e-166
Identity = 237/273 (86.81%), Postives = 248/273 (90.84%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60
           MLRLQ LSSSLLP   PELSPET SN RLC LN  RPLLTL+TT K SPKCQYSWNT QH
Sbjct: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60

Query: 61  QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120
           Q ++FE  SQTDSFS Q+RAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF
Sbjct: 61  Q-AAFESGSQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120

Query: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180
           KISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CE FHDPYKGKSD
Sbjct: 121 KISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSD 180

Query: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240
           EGKVRKILKVEPLPDGSG FFNLSVQNKL NVDESIYIPITKAEYTVLVEAFKFILPHLM
Sbjct: 181 EGKVRKILKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLM 240

Query: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273
           GWH IAN+MT+ ED+ R N ANPRYGGDFEW+R
Sbjct: 241 GWHAIANSMTRTEDNRRANDANPRYGGDFEWSR 272

[Close]

BLAST of IVF0022890 vs. TAIR 10
Match: AT1G14410.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 327.4 bits (838), Expect = 1.1e-89
Identity = 156/228 (68.42%), Postives = 188/228 (82.46%), Query Frame = 0


Query: 46  KPSPKCQYSWNTHQHQQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTV 105
           KP+ K    ++    Q   FE     DS S  S    A  LP RF+VGHSIYKGKAALTV
Sbjct: 40  KPTTKTVKLFSVKSRQTDYFEKQRFGDSSSSPS---PAEGLPARFYVGHSIYKGKAALTV 99

Query: 106 EPRPPEFTPLDSGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPR 165
           +PR PEF  LDSGAFK+S++G ++LQFAP+AGVRQYDWS+KQVFSLSVTE+G+L++LGPR
Sbjct: 100 DPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPR 159

Query: 166 EACEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEY 225
           E+CEFFHDP+KGKSDEGKVRK+LKVEPLPDGSGHFFNLSVQNKL+NVDESIYIPIT+AE+
Sbjct: 160 ESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEF 219

Query: 226 TVLVEAFKFILPHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
            VL+ AF F+LP+L+GWH  AN++ KPE++SR N A+P YGGD+EWNR
Sbjct: 220 AVLISAFNFVLPYLIGWHAFANSI-KPEETSRVNNASPNYGGDYEWNR 263

[Close]

BLAST of IVF0022890 vs. TAIR 10
Match: AT2G02740.2 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 320.1 bits (819), Expect = 1.7e-87
Identity = 152/225 (67.56%), Postives = 182/225 (80.89%), Query Frame = 0


Query: 49  PKCQYSWNTHQHQQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPR 108
           P  +        Q   FE     DS S Q+    A    PRF+VGHSIYKGKAALT+EPR
Sbjct: 48  PTARLKLTVKSRQSDYFEKQRFGDSSSSQN----AEVSSPRFYVGHSIYKGKAALTIEPR 107

Query: 109 PPEFTPLDSGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREAC 168
            PEF  L+SGAFK+++EG ++LQFAPAAGVRQYDWSRKQVFSLSVTE+G+L++LGPRE+C
Sbjct: 108 APEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESC 167

Query: 169 EFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVL 228
           EFFHDP+KGK DEGKVRK+LKVEPLPDGSG FFNLSVQNKL+NVDES+YIPITKAE+ VL
Sbjct: 168 EFFHDPFKGKGDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVL 227

Query: 229 VEAFKFILPHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           + AF F+LPHL+GW   AN++ KPEDS+R N A+P+YGGD+EW+R
Sbjct: 228 ISAFNFVLPHLIGWSAFANSI-KPEDSNRLNNASPKYGGDYEWSR 267

[Close]

BLAST of IVF0022890 vs. TAIR 10
Match: AT2G02740.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 317.0 bits (811), Expect = 1.5e-86
Identity = 153/226 (67.70%), Postives = 183/226 (80.97%), Query Frame = 0


Query: 49  PKCQYSWNTHQHQQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPR 108
           P  +        Q   FE     DS S Q+    A    PRF+VGHSIYKGKAALT+EPR
Sbjct: 48  PTARLKLTVKSRQSDYFEKQRFGDSSSSQN----AEVSSPRFYVGHSIYKGKAALTIEPR 107

Query: 109 PPEFTPLDSGAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREAC 168
            PEF  L+SGAFK+++EG ++LQFAPAAGVRQYDWSRKQVFSLSVTE+G+L++LGPRE+C
Sbjct: 108 APEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESC 167

Query: 169 EFFHDPYKGK-SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTV 228
           EFFHDP+KGK SDEGKVRK+LKVEPLPDGSG FFNLSVQNKL+NVDES+YIPITKAE+ V
Sbjct: 168 EFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAV 227

Query: 229 LVEAFKFILPHLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 274
           L+ AF F+LPHL+GW   AN++ KPEDS+R N A+P+YGGD+EW+R
Sbjct: 228 LISAFNFVLPHLIGWSAFANSI-KPEDSNRLNNASPKYGGDYEWSR 268

[Close]

BLAST of IVF0022890 vs. TAIR 10
Match: AT1G71260.1 (WHIRLY 2 )

HSP 1 Score: 184.1 bits (466), Expect = 1.5e-46
Identity = 95/211 (45.02%), Postives = 136/211 (64.45%), Query Frame = 0


Query: 68  ASQTDSFSP-QSRAGAAAALPP-RFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISRE 127
           AS ++S +P +   G  AA P  R F  +SI+KGKAAL+VEP  P FT +DSG  +I R 
Sbjct: 30  ASWSNSSTPGRGFPGKDAAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRR 89

Query: 128 GLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSDEGKVR 187
           G +M+ F PA G R+YDW +KQ F+LS TE+GSLI++G +++ EFFHDP    S+ G+VR
Sbjct: 90  GSLMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVR 149

Query: 188 KILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTI 247
           K L V+P  DGSG+F +LSV N ++  ++   +P+TKAE+ V+  AF F LPH+MGW+ +
Sbjct: 150 KSLSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRL 209

Query: 248 ---ANTMTKPEDSSRGNTANPRYGGDFEWNR 274
               NT   P  +       P+   + EW++
Sbjct: 210 TGHVNTEALPSRNVSHLKTEPQL--ELEWDK 238

The following BLAST results are available for this feature:

BLAST of IVF0022890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9S3	1.5e-88	68.42	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q66GR6	2.1e-85	67.70	Single-stranded DNA-binding protein WHY3, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q9LL85	3.5e-85	61.45	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=...	[more]
B2LXS7	6.1e-69	59.80	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=W...	[more]
Q8VYF7	2.1e-45	45.02	Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana ...	[more]

BLAST of IVF0022890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BP35	6.8e-156	100.00	Single-stranded DNA-binding protein WHY1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C3B0	6.8e-156	100.00	single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucumis melo OX=...	[more]
A0A0A0KG25	1.1e-145	94.20	WHY1 OS=Cucumis sativus OX=3659 GN=Csa_6G404240 PE=2 SV=1	[more]
A0A6J1KPI3	1.7e-130	84.84	single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita maxima...	[more]
A0A6J1DD66	1.1e-129	84.84	single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Momordica charan...	[more]

BLAST of IVF0022890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456468.1	5.24e-199	100.00	PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucumis...	[more]
XP_011657483.1	1.53e-185	94.20	single-stranded DNA-binding protein WHY1, chloroplastic [Cucumis sativus] >KGN47...	[more]
XP_038884311.1	1.91e-173	89.78	single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X2 [Beninca...	[more]
XP_038884310.1	1.33e-171	89.45	single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X1 [Beninca...	[more]
XP_023546045.1	6.01e-166	86.81	single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita pepo sub...	[more]

BLAST of IVF0022890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14410.1	1.1e-89	68.42	ssDNA-binding transcriptional regulator	[more]
AT2G02740.2	1.7e-87	67.56	ssDNA-binding transcriptional regulator	[more]
AT2G02740.1	1.5e-86	67.70	ssDNA-binding transcriptional regulator	[more]
AT1G71260.1	1.5e-46	45.02	WHIRLY 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013742	Whirly transcription factor	PFAM	PF08536	Whirly	coord: 96..230 e-value: 3.1E-60 score: 202.0
IPR013742	Whirly transcription factor	PANTHER	PTHR31745	SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL	coord: 28..273
IPR009044	ssDNA-binding transcriptional regulator	GENE3D	2.30.31.10	Transcriptional Coactivator Pc4; Chain A	coord: 81..254 e-value: 5.7E-77 score: 259.3
IPR009044	ssDNA-binding transcriptional regulator	SUPERFAMILY	54447	ssDNA-binding transcriptional regulator domain	coord: 88..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..78
None	No IPR available	PANTHER	PTHR31745:SF2	SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC	coord: 28..273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0022890.2	IVF0022890.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding