IVF0022871 (gene) Melon (IVF77) v1

Overview


Name	IVF0022871
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic
Location	chr09: 18884783 .. 18886773 (-)
RNA-Seq Expression	IVF0022871
Synteny	IVF0022871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATAGACAAAGATAAGGAAGAAAGATAAGAGAGAAAGAGAGAGAAGAAAAATTATCGTATGAATTATGATTTAGTTATTGAAAGAGTACTGAACAGAGCTTTTGATGAACATGAACTGCTGCGGCATTGGCCTTCTTCACATCCCCAAGGCCTTGCCTTCTCTCTCCTCTTCCAAAACTCTTTTCCCTTCTCTCTCTTCTCCCTTTAAGCTTCACAATTTGAATATTTTGCCTTCCAATTCAAACCCCAAAAATGTATATATATATATCTCTCTCTCTCTCTCTCTCTCTAACTCTCTGTTTCTCTCTCTGAACATTGTTTTTTTTCTTTTTGCTAATGGGTGTAGTTTGAGATAGTCGGAAGTATCAAAGAAGAAGATCCCATTGGGTATCTTGATAAAAAGAAAACAAGTTTAGCTCTTCAACTTGCTGCCTTTTTAGCCACTGTAAGCCAACTTTCTTCCCCCATTTTTAAAAACCTCAATATGCTGAATTAACTAACTATTGTTGGATTATCTAATTAATATATGTATATAGTTTTGGGGGGTAATATACGTTGTTTGAAATAACAGGTTGGGGAGCCAGCAAGTGCAGTAACAGGAGACAACAACCATGAAGTTCCTTTAACATGGGTTTTGGCACAATTAGGCTTTGTTGGATTCTTTTACTTCCTTGTCTTTCCTGTAAGTATAGAATTTAATTAATTTTCCCATATTCTTTCTCTAAATTACTTATGAATTAATTAAGTTAATTTCAAAAGTGAACATTTTAAATTTAATTTTAATTAATCATGTATTTGTTATTGCAGCCGATCATCATGAATTGGCTGAGGATAAGATGGTATAGAAGAAACTTGTTGGAAATGTATATCCAATTCATGTGTGTCTTCCTCTTCTTCCCTGGGTAAGTAACTATTAAGTTCTTACATCTATAGGTATTACAAATCATTTTTCTCATATACCAGTTAAGCGTTCGGAAATTAGCCAAGTTGAGTCATGAATGTTTAAGATTAGGAAGAAAATACAGAAAGTTCTAACATTTGCGTGAGTTTTTTAGCCATCAAATAATTCTAGAGAACTAAAACAGTATAAAGAGCTCAAAGAATGTATATTTTGATTTTTAGGAAATATTGTTTCGTAATTGTTATCAGTTGCTAGCTATGTTATAGTTGCATGTCAAAGTTGTCAAGATAATCTTATTTACAAATCTAAGTACACACAACTGATCCAAGAGACATGAACCAATTTTGACTACCGACCGGCCTATCAGTCAGCTTCCACAAAGGTCGGTCTTCGCCACATATGGAAGTTTCAAGGGTTGGCTCAGTCCCTCTCTGTCGTCACAACGTCCCACGCAGGCGTGTAGAGCATTGTGGCCAACCTTATGGGCTGGCTCAAACTAGCTCCTAGGGTCAACCTCCATGAGATTTTATGACTTTATGGTTAATCGTATCTCATTTTATCTCATCCTTTCCAATAGTTCGTCTTTAGAGTGGCACTCAAGTAGACATATTATCTCTCAGACACCTCAACTGATCGAGTTTTCGCTCCTAACATAGACTGGTCTCCAACAATTTAAGACATATTTGTGACTGTCAAAATCACTTCCAAACCTGCTCGTAAATTGAAAGTTGACGTTTGTTTAATTTGCAGAATTCTATTATGGGCGCCATTTTTGAACTTCAGAAAGTTTCCACGAGATCCATCAATGAAGTATCCATGGTCAACACCTCAAGACCCATCTCAGATAAAAAATGCATACTTGAAATACCCATTTGCTAAGCCTGAAGATTATGATTGGTAACCGTCGTCTGCAAAAATTCCTCTTCCAAAGGCTCAACCTTTTTCCTTCAAATTCATGAATGAAAATTAATATATACTTTGTTGTAATCTTGTATAATCCACATCATCCAAGAAAATATATCAGTCTTGTTTCTTTGATTGCTCACTACATTATGTGTTGAATACATATGATAATTAATATGCTAGCAG

mRNA sequence

CCATAGACAAAGATAAGGAAGAAAGATAAGAGAGAAAGAGAGAGAAGAAAAATTATCGTATGAATTATGATTTAGTTATTGAAAGAGTACTGAACAGAGCTTTTGATGAACATGAACTGCTGCGGCATTGGCCTTCTTCACATCCCCAAGGCCTTGCCTTCTCTCTCCTCTTCCAAAACTCTTTTCCCTTCTCTCTCTTCTCCCTTTAAGCTTCACAATTTGAATATTTTGCCTTCCAATTCAAACCCCAAAAATTTTGAGATAGTCGGAAGTATCAAAGAAGAAGATCCCATTGGGTATCTTGATAAAAAGAAAACAAGTTTAGCTCTTCAACTTGCTGCCTTTTTAGCCACTGTTGGGGAGCCAGCAAGTGCAGTAACAGGAGACAACAACCATGAAGTTCCTTTAACATGGGTTTTGGCACAATTAGGCTTTGTTGGATTCTTTTACTTCCTTGTCTTTCCTCCGATCATCATGAATTGGCTGAGGATAAGATGGTATAGAAGAAACTTGTTGGAAATGTATATCCAATTCATGTGTGTCTTCCTCTTCTTCCCTGGAATTCTATTATGGGCGCCATTTTTGAACTTCAGAAAGTTTCCACGAGATCCATCAATGAAGTATCCATGGTCAACACCTCAAGACCCATCTCAGATAAAAAATGCATACTTGAAATACCCATTTGCTAAGCCTGAAGATTATGATTGGTAACCGTCGTCTGCAAAAATTCCTCTTCCAAAGGCTCAACCTTTTTCCTTCAAATTCATGAATGAAAATTAATATATACTTTGTTGTAATCTTGTATAATCCACATCATCCAAGAAAATATATCAGTCTTGTTTCTTTGATTGCTCACTACATTATGTGTTGAATACATATGATAATTAATATGCTAGCAG

Coding sequence (CDS)

ATGAACATGAACTGCTGCGGCATTGGCCTTCTTCACATCCCCAAGGCCTTGCCTTCTCTCTCCTCTTCCAAAACTCTTTTCCCTTCTCTCTCTTCTCCCTTTAAGCTTCACAATTTGAATATTTTGCCTTCCAATTCAAACCCCAAAAATTTTGAGATAGTCGGAAGTATCAAAGAAGAAGATCCCATTGGGTATCTTGATAAAAAGAAAACAAGTTTAGCTCTTCAACTTGCTGCCTTTTTAGCCACTGTTGGGGAGCCAGCAAGTGCAGTAACAGGAGACAACAACCATGAAGTTCCTTTAACATGGGTTTTGGCACAATTAGGCTTTGTTGGATTCTTTTACTTCCTTGTCTTTCCTCCGATCATCATGAATTGGCTGAGGATAAGATGGTATAGAAGAAACTTGTTGGAAATGTATATCCAATTCATGTGTGTCTTCCTCTTCTTCCCTGGAATTCTATTATGGGCGCCATTTTTGAACTTCAGAAAGTTTCCACGAGATCCATCAATGAAGTATCCATGGTCAACACCTCAAGACCCATCTCAGATAAAAAATGCATACTTGAAATACCCATTTGCTAAGCCTGAAGATTATGATTGGTAA

Protein sequence

MNMNCCGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSQIKNAYLKYPFAKPEDYDW

Homology

[Close]

BLAST of IVF0022871 vs. ExPASy Swiss-Prot
Match: Q9CAC5 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhL PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.3e-49
Identity = 110/209 (52.63%), Postives = 131/209 (62.68%), Query Frame = 0


Query: 3   MNCCGIGLLHIPKALPSLSSSKTLFPSLSSPF-----------KLHNLNILPSNSNPKNF 62
           M+ CG   L+ P ALPSLS       S+ SPF            LHN+N        K  
Sbjct: 1   MSRCGSLGLYAPNALPSLSLKPR---SVKSPFCITSHTKPNDTLLHNVN----KMRAKAC 60

Query: 63  EIVGSIKEEDPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFV 122
           +I+G+            KKT LA QL A LAT+  PA A+TG NN +  L+ V+  +G +
Sbjct: 61  DILGA------------KKTILAAQLGAVLATIDHPALAITGVNNQQ-ELSSVVLDIGII 120

Query: 123 GFFYFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSM 182
             +YFLV PPIIMNWLR+RWYRR   EMY+QFM VF+FFPG+LLWAPFLNFRKFPRDP+M
Sbjct: 121 SVWYFLVMPPIIMNWLRVRWYRRKFFEMYLQFMFVFMFFPGLLLWAPFLNFRKFPRDPNM 180

Query: 183 KYPWSTPQDPSQIKNAYLKYPFAKPEDYD 201
           K PW  P DP  IKN YLKYP+A PEDYD
Sbjct: 181 KNPWDKPTDPDSIKNVYLKYPYATPEDYD 189

[Close]

BLAST of IVF0022871 vs. ExPASy Swiss-Prot
Match: Q8DKZ3 (NAD(P)H-quinone oxidoreductase subunit L OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=ndhL PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.2e-06
Identity = 28/64 (43.75%), Postives = 35/64 (54.69%), Query Frame = 0


Query: 104 VLAQLGFVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFR 163
           VL   G +   Y LV P I+  +L  RWY  +  E    +  V  FFPG+LL APF+NFR
Sbjct: 9   VLGVYGALAGLYLLVVPAIVYAYLNARWYVASSFERAFMYFLVTFFFPGLLLLAPFINFR 68

Query: 164 KFPR 168
             PR
Sbjct: 69  PQPR 72

[Close]

BLAST of IVF0022871 vs. ExPASy Swiss-Prot
Match: Q10W93 (NAD(P)H-quinone oxidoreductase subunit L OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=ndhL PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.2e-06
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 115 YFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFR 164
           YFLV P I+  +L+ RWY  + +E    +  +FLFFPG+L+ +PFLNFR
Sbjct: 22  YFLVMPAIVYAYLKTRWYVVSSIERVFMYFLMFLFFPGMLVLSPFLNFR 70

[Close]

BLAST of IVF0022871 vs. ExPASy Swiss-Prot
Match: Q7V897 (NAD(P)H-quinone oxidoreductase subunit L OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=ndhL PE=3 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-05
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 104 VLAQLGFVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFR 163
           VLA    +G  Y +V P ++ +W+  RW+     E    +  VFLFFPG++L+APFLN R
Sbjct: 17  VLAAYALLGGLYLIVVPLLLYSWMNRRWHCMGKFERLSAYGLVFLFFPGLILFAPFLNLR 76

[Close]

BLAST of IVF0022871 vs. ExPASy Swiss-Prot
Match: Q7U620 (NAD(P)H-quinone oxidoreductase subunit L OS=Synechococcus sp. (strain WH8102) OX=84588 GN=ndhL PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-05
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 104 VLAQLGFVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFR 163
           V+     +G  Y LV P  +  W+  RW R   +E  + +  VFLFFPG++++APFLNFR
Sbjct: 17  VILAYALLGGLYLLVVPLALFFWMNSRWTRMGKIERLLVYGLVFLFFPGMVVFAPFLNFR 76

[Close]

BLAST of IVF0022871 vs. ExPASy TrEMBL
Match: A0A5D3E3M5 (NAD(P)H-quinone oxidoreductase subunit L OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00350 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 5.8e-112
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 3   MNCCGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDP 62
           MNCCGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDP
Sbjct: 1   MNCCGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDP 60

Query: 63  IGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPI 122
           IGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPI
Sbjct: 61  IGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPI 120

Query: 123 IMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS 182
           IMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS
Sbjct: 121 IMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS 180

Query: 183 QIKNAYLKYPFAKPEDYDW 202
           QIKNAYLKYPFAKPEDYDW
Sbjct: 181 QIKNAYLKYPFAKPEDYDW 199

[Close]

BLAST of IVF0022871 vs. ExPASy TrEMBL
Match: A0A0A0KSV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569340 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.6e-107
Identity = 189/201 (94.03%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MNMNCCGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEE 60
           MNM CC IGLLHIPKALPSLSSSKTLFPSL SPFKLHN NILPSNSNPKNF+IVGSIKEE
Sbjct: 1   MNMKCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEE 60

Query: 61  DPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFP 120
           DPIGYL KKKTSLAL LAAFLATVGEPASAVTG+NNHEVPLTWVLAQLG +GFFYFLVFP
Sbjct: 61  DPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFP 120

Query: 121 PIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180
           PIIMNWLRIRWYRRNLLEMY+QFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD
Sbjct: 121 PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180

Query: 181 PSQIKNAYLKYPFAKPEDYDW 202
           PS+IKNAYLKYPFAKPEDYDW
Sbjct: 181 PSKIKNAYLKYPFAKPEDYDW 201

[Close]

BLAST of IVF0022871 vs. ExPASy TrEMBL
Match: A0A6J1DZB7 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025670 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.3e-84
Identity = 160/204 (78.43%), Postives = 178/204 (87.25%), Query Frame = 0


Query: 1   MNMNCC-GIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNP--KNFEIVGSI 60
           MNM CC G+G LHIP+ALPSLSSS++LFPSLSS  KL     LPSNS P  KNF+ V SI
Sbjct: 1   MNMRCCLGLG-LHIPRALPSLSSSQSLFPSLSSISKLQK---LPSNSTPNNKNFQAVASI 60

Query: 61  KEEDPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFL 120
             EDPI  + +KK SLA Q+AA LAT+GEPA+AVTGDNNHEVPL+W+L QLG VGFFYFL
Sbjct: 61  -SEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILTQLGIVGFFYFL 120

Query: 121 VFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWST 180
           VFPPIIMNWLRIRWYRRNLLEMY+QFMCVFLFFPGIL+WAPFLNFRK PRDPS+KYPW+T
Sbjct: 121 VFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWAT 180

Query: 181 PQDPSQIKNAYLKYPFAKPEDYDW 202
           P+DPSQ+KNAYLKYPFAKPEDYDW
Sbjct: 181 PEDPSQVKNAYLKYPFAKPEDYDW 199

[Close]

BLAST of IVF0022871 vs. ExPASy TrEMBL
Match: A0A6J1GNR4 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456098 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.0e-84
Identity = 158/196 (80.61%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 6   CGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDPIGY 65
           C +G LHIPKALPSLSSSKT+ P LS+PFKL     LPSN    +F++V  I+ EDPIG+
Sbjct: 3   CSLG-LHIPKALPSLSSSKTISPFLSAPFKLLK---LPSNPTSISFQVVACIR-EDPIGF 62

Query: 66  LDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPIIMN 125
           L +KKTSL+LQ AA LATV EPA+AVTGDNNHEVPLTW+L QLG VGFFYFLVFPPIIMN
Sbjct: 63  LRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILTQLGIVGFFYFLVFPPIIMN 122

Query: 126 WLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSQIK 185
           WLRIRWYRRNLLEMY+QFMCVFL FPGILLWAPFLNFRKFPRDPSMKYPWSTPQ+PSQIK
Sbjct: 123 WLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIK 182

Query: 186 NAYLKYPFAKPEDYDW 202
           N YLKYPFAKPEDYDW
Sbjct: 183 NGYLKYPFAKPEDYDW 193

[Close]

BLAST of IVF0022871 vs. ExPASy TrEMBL
Match: A0A6J1DYB3 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025670 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.1e-84
Identity = 158/202 (78.22%), Postives = 175/202 (86.63%), Query Frame = 0


Query: 1   MNMNCC-GIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKE 60
           MNM CC G+G LHIP+ALPSLSSS++LFPSLSS  KL     LPSNS P N   V SI  
Sbjct: 1   MNMRCCLGLG-LHIPRALPSLSSSQSLFPSLSSISKLQK---LPSNSTPNNKNAVASI-S 60

Query: 61  EDPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVF 120
           EDPI  + +KK SLA Q+AA LAT+GEPA+AVTGDNNHEVPL+W+L QLG VGFFYFLVF
Sbjct: 61  EDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILTQLGIVGFFYFLVF 120

Query: 121 PPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQ 180
           PPIIMNWLRIRWYRRNLLEMY+QFMCVFLFFPGIL+WAPFLNFRK PRDPS+KYPW+TP+
Sbjct: 121 PPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPE 180

Query: 181 DPSQIKNAYLKYPFAKPEDYDW 202
           DPSQ+KNAYLKYPFAKPEDYDW
Sbjct: 181 DPSQVKNAYLKYPFAKPEDYDW 197

[Close]

BLAST of IVF0022871 vs. NCBI nr
Match: KAA0046329.1 (NAD(P)H-quinone oxidoreductase subunit L [Cucumis melo var. makuwa] >TYK30492.1 NAD(P)H-quinone oxidoreductase subunit L [Cucumis melo var. makuwa])

HSP 1 Score: 415 bits (1066), Expect = 2.08e-146
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 3   MNCCGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDP 62
           MNCCGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDP
Sbjct: 1   MNCCGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDP 60

Query: 63  IGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPI 122
           IGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPI
Sbjct: 61  IGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPI 120

Query: 123 IMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS 182
           IMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS
Sbjct: 121 IMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS 180

Query: 183 QIKNAYLKYPFAKPEDYDW 201
           QIKNAYLKYPFAKPEDYDW
Sbjct: 181 QIKNAYLKYPFAKPEDYDW 199

[Close]

BLAST of IVF0022871 vs. NCBI nr
Match: XP_004150114.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Cucumis sativus])

HSP 1 Score: 397 bits (1021), Expect = 1.63e-139
Identity = 189/201 (94.03%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MNMNCCGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEE 60
           MNM CC IGLLHIPKALPSLSSSKTLFPSL SPFKLHN NILPSNSNPKNF+IVGSIKEE
Sbjct: 1   MNMKCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEE 60

Query: 61  DPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFP 120
           DPIGYL KKKTSLAL LAAFLATVGEPASAVTG+NNHEVPLTWVLAQLG +GFFYFLVFP
Sbjct: 61  DPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFP 120

Query: 121 PIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180
           PIIMNWLRIRWYRRNLLEMY+QFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD
Sbjct: 121 PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180

Query: 181 PSQIKNAYLKYPFAKPEDYDW 201
           PS+IKNAYLKYPFAKPEDYDW
Sbjct: 181 PSKIKNAYLKYPFAKPEDYDW 201

[Close]

BLAST of IVF0022871 vs. NCBI nr
Match: KAE8648604.1 (hypothetical protein Csa_008632 [Cucumis sativus])

HSP 1 Score: 393 bits (1010), Expect = 1.57e-132
Identity = 188/200 (94.00%), Postives = 193/200 (96.50%), Query Frame = 0


Query: 1   MNMNCCGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEE 60
           MNM CC IGLLHIPKALPSLSSSKTLFPSL SPFKLHN NILPSNSNPKNF+IVGSIKEE
Sbjct: 1   MNMKCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEE 60

Query: 61  DPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFP 120
           DPIGYL KKKTSLAL LAAFLATVGEPASAVTG+NNHEVPLTWVLAQLG +GFFYFLVFP
Sbjct: 61  DPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFP 120

Query: 121 PIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180
           PIIMNWLRIRWYRRNLLEMY+QFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD
Sbjct: 121 PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180

Query: 181 PSQIKNAYLKYPFAKPEDYD 200
           PS+IKNAYLKYPFAKPEDYD
Sbjct: 181 PSKIKNAYLKYPFAKPEDYD 200

[Close]

BLAST of IVF0022871 vs. NCBI nr
Match: XP_038875378.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Benincasa hispida])

HSP 1 Score: 358 bits (920), Expect = 3.30e-124
Identity = 176/196 (89.80%), Postives = 185/196 (94.39%), Query Frame = 0


Query: 6   CGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDPIGY 65
           C +G LHIPKALPSLSSSKTLFPSLSS FKLHNLN LPSNS  KNFE+VGSIKE DP+GY
Sbjct: 3   CSLG-LHIPKALPSLSSSKTLFPSLSSSFKLHNLN-LPSNSKLKNFEVVGSIKE-DPVGY 62

Query: 66  LDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPIIMN 125
           L +KKTSLALQLAA LATVGE A+AVTG+NNHEVPLTW+LAQLG VGFFYFLVFPPIIMN
Sbjct: 63  LHQKKTSLALQLAAILATVGEAANAVTGENNHEVPLTWILAQLGIVGFFYFLVFPPIIMN 122

Query: 126 WLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSQIK 185
           WLRIRWYRRNLLEMY+QFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQ+PSQIK
Sbjct: 123 WLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIK 182

Query: 186 NAYLKYPFAKPEDYDW 201
           NAYLKYPFAKPEDYDW
Sbjct: 183 NAYLKYPFAKPEDYDW 195

[Close]

BLAST of IVF0022871 vs. NCBI nr
Match: KAG6601873.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 326 bits (836), Expect = 1.95e-111
Identity = 160/196 (81.63%), Postives = 173/196 (88.27%), Query Frame = 0


Query: 6   CGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDPIGY 65
           C +G LHIPKALPSLSSSKT+ P LS+PFKL  L   PSN    NF++V  I+E DPIG+
Sbjct: 3   CSLG-LHIPKALPSLSSSKTISPFLSAPFKLLKL---PSNPTSINFQVVACIRE-DPIGF 62

Query: 66  LDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPIIMN 125
           L +KKTSL+LQ AA LATV EPA+AVTGDNNHEVPLTW+LAQLG VGFFYFLVFPPIIMN
Sbjct: 63  LRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMN 122

Query: 126 WLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSQIK 185
           WLRIRWYRRNLLEMY+QFMCVFL FPGILLWAPFLNFRKFPRDPSMKYPWSTPQ+PSQIK
Sbjct: 123 WLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIK 182

Query: 186 NAYLKYPFAKPEDYDW 201
           N YLKYPFAKPEDYDW
Sbjct: 183 NGYLKYPFAKPEDYDW 193

[Close]

BLAST of IVF0022871 vs. TAIR 10
Match: AT1G70760.1 (inorganic carbon transport protein-related )

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-50
Identity = 110/209 (52.63%), Postives = 131/209 (62.68%), Query Frame = 0


Query: 3   MNCCGIGLLHIPKALPSLSSSKTLFPSLSSPF-----------KLHNLNILPSNSNPKNF 62
           M+ CG   L+ P ALPSLS       S+ SPF            LHN+N        K  
Sbjct: 1   MSRCGSLGLYAPNALPSLSLKPR---SVKSPFCITSHTKPNDTLLHNVN----KMRAKAC 60

Query: 63  EIVGSIKEEDPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFV 122
           +I+G+            KKT LA QL A LAT+  PA A+TG NN +  L+ V+  +G +
Sbjct: 61  DILGA------------KKTILAAQLGAVLATIDHPALAITGVNNQQ-ELSSVVLDIGII 120

Query: 123 GFFYFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSM 182
             +YFLV PPIIMNWLR+RWYRR   EMY+QFM VF+FFPG+LLWAPFLNFRKFPRDP+M
Sbjct: 121 SVWYFLVMPPIIMNWLRVRWYRRKFFEMYLQFMFVFMFFPGLLLWAPFLNFRKFPRDPNM 180

Query: 183 KYPWSTPQDPSQIKNAYLKYPFAKPEDYD 201
           K PW  P DP  IKN YLKYP+A PEDYD
Sbjct: 181 KNPWDKPTDPDSIKNVYLKYPYATPEDYD 189

The following BLAST results are available for this feature:

BLAST of IVF0022871 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAC5	2.3e-49	52.63	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q8DKZ3	9.2e-06	43.75	NAD(P)H-quinone oxidoreductase subunit L OS=Thermosynechococcus elongatus (strai...	[more]
Q10W93	9.2e-06	48.98	NAD(P)H-quinone oxidoreductase subunit L OS=Trichodesmium erythraeum (strain IMS...	[more]
Q7V897	1.6e-05	41.67	NAD(P)H-quinone oxidoreductase subunit L OS=Prochlorococcus marinus (strain MIT ...	[more]
Q7U620	1.6e-05	41.67	NAD(P)H-quinone oxidoreductase subunit L OS=Synechococcus sp. (strain WH8102) OX...	[more]

BLAST of IVF0022871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E3M5	5.8e-112	100.00	NAD(P)H-quinone oxidoreductase subunit L OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A0A0KSV9	9.6e-107	94.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569340 PE=4 SV=1	[more]
A0A6J1DZB7	2.3e-84	78.43	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Momordica ...	[more]
A0A6J1GNR4	3.0e-84	80.61	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Cucurbita ...	[more]
A0A6J1DYB3	5.1e-84	78.22	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 OS=Momordica ...	[more]

BLAST of IVF0022871 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046329.1	2.08e-146	100.00	NAD(P)H-quinone oxidoreductase subunit L [Cucumis melo var. makuwa] >TYK30492.1 ...	[more]
XP_004150114.1	1.63e-139	94.03	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Cucumis sativus]	[more]
KAE8648604.1	1.57e-132	94.00	hypothetical protein Csa_008632 [Cucumis sativus]	[more]
XP_038875378.1	3.30e-124	89.80	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Benincasa hispida]	[more]
KAG6601873.1	1.95e-111	81.63	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic, partial [Cucurbita argy...	[more]

BLAST of IVF0022871 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70760.1	1.6e-50	52.63	inorganic carbon transport protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019654	NAD(P)H-quinone oxidoreductase subunit L	PFAM	PF10716	NdhL	coord: 96..168 e-value: 5.3E-29 score: 100.0
None	No IPR available	PANTHER	PTHR36727	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT L, CHLOROPLASTIC	coord: 11..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0022871.2	IVF0022871.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding