IVF0022768 (gene) Melon (IVF77) v1

Overview
NameIVF0022768
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSubtilisin-like protease SBT4.14
Locationchr12: 5866546 .. 5866857 (+)
RNA-Seq ExpressionIVF0022768
SyntenyIVF0022768
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAATGGGGTTATTCCCGACTCATTACTGACGTCAGGAATGACGATGTCGGGGATTCATTATTTCCGACGCATCAACAACGTCGAAAAAGATGATGTCGGGAGAAGGGTATTCCTGACACCTTGTTTGGTGACACGTCCGAAAAAGGTCTCCCGACACGTTTCTTCCGACGGTCTTCCTGACGCACCATTATGCATTGGGAATTGTTTTCCTGACGTATCTTCCACTATTCCTGATGTTTTTGTGCATCGGGAAATAGCCCCATTTCATGTAGTGATGCTATCACTGATAGACACCTTTCGATCATAA

mRNA sequence

ATGGGAAATGGGGTTATTCCCGACTCATTACTGACGTCAGGAATGACGATGTCGGGGATTCATTATTTCCGACGCATCAACAACGTCGAAAAAGATGATGTCGGGAGAAGGGTATTCCTGACACCTTGTTTGGTGACACGTCCGAAAAAGGTCTCCCGACACGTTTCTTCCGACGGTCTTCCTGACGCACCATTATGCATTGGGAATTGTTTTCCTGACGTATCTTCCACTATTCCTGATGTTTTTGTGCATCGGGAAATAGCCCCATTTCATGTAGTGATGCTATCACTGATAGACACCTTTCGATCATAA

Coding sequence (CDS)

ATGGGAAATGGGGTTATTCCCGACTCATTACTGACGTCAGGAATGACGATGTCGGGGATTCATTATTTCCGACGCATCAACAACGTCGAAAAAGATGATGTCGGGAGAAGGGTATTCCTGACACCTTGTTTGGTGACACGTCCGAAAAAGGTCTCCCGACACGTTTCTTCCGACGGTCTTCCTGACGCACCATTATGCATTGGGAATTGTTTTCCTGACGTATCTTCCACTATTCCTGATGTTTTTGTGCATCGGGAAATAGCCCCATTTCATGTAGTGATGCTATCACTGATAGACACCTTTCGATCATAA

Protein sequence

MGNGVIPDSLLTSGMTMSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPLCIGNCFPDVSSTIPDVFVHREIAPFHVVMLSLIDTFRS
Homology
[Close]
BLAST of IVF0022768 vs. ExPASy TrEMBL
Match: A0A5D3DCP6 (Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00870 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.6e-52
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0 

Query: 1   MGNGVIPDSLLTSGMTMSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGL 60
           MGNGVIPDSLLTSGM MSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGL
Sbjct: 1   MGNGVIPDSLLTSGMMMSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGL 60

Query: 61  PDAPLCIGNCFPDVSSTIPDVFVHREIAPFHVVMLSLIDTFRS 104
           PDAPLCIGNCFPDVSSTIPDVFVHREIAPFHVVMLSLIDTFRS
Sbjct: 61  PDAPLCIGNCFPDVSSTIPDVFVHREIAPFHVVMLSLIDTFRS 103

[Close]
BLAST of IVF0022768 vs. ExPASy TrEMBL
Match: A0A5A7UTP8 (Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004150 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 7.5e-07
Identity = 34/78 (43.59%), Postives = 45/78 (57.69%), Query Frame = 0 

Query: 6   IPDSLLTSGMTMSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPL 65
           +P   LT  + MS +   R   +++ D+VGR VF  P LVT  + +S  VSSD LPD   
Sbjct: 46  VPWPHLTLELWMSEMPCRRCTVDIDNDNVGRSVFSMPLLVTHQESLSLRVSSDDLPDVAF 105

Query: 66  CIGNCFPDVSSTIPDVFV 84
           CI N  PDV +T  DVF+
Sbjct: 106 CIENSVPDVINTYVDVFM 123

[Close]
BLAST of IVF0022768 vs. ExPASy TrEMBL
Match: A0A5D3DXG9 (Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00880 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-06
Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 0 

Query: 28 NVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPLCIGNCFPDVSSTIPDVFVHREI 87
          +++ D+VGR V   P LVT  + +S  VSSD LPD   CI N  PDV +T  DVF+ RE 
Sbjct: 12 DIDNDNVGRSVLSMPLLVTHQESLSLRVSSDDLPDVAFCIENSVPDVINTYVDVFMRRES 71

Query: 88 APF 91
            F
Sbjct: 72 PHF 74

[Close]
BLAST of IVF0022768 vs. ExPASy TrEMBL
Match: A0A5A7VP88 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001570 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.8e-04
Identity = 23/40 (57.50%), Postives = 27/40 (67.50%), Query Frame = 0 

Query: 34  VGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPLCIGNCFPD 74
           + R   L   LVTR +KVSR +S DGLPD P C+GN FPD
Sbjct: 114 ISREGVLDALLVTRREKVSRRISLDGLPDVPFCVGNWFPD 153

[Close]
BLAST of IVF0022768 vs. NCBI nr
Match: KAA0051817.1 (subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa] >TYK21427.1 subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa])

HSP 1 Score: 212 bits (540), Expect = 2.35e-69
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0 

Query: 1   MGNGVIPDSLLTSGMTMSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGL 60
           MGNGVIPDSLLTSGM MSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGL
Sbjct: 1   MGNGVIPDSLLTSGMMMSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGL 60

Query: 61  PDAPLCIGNCFPDVSSTIPDVFVHREIAPFHVVMLSLIDTFRS 103
           PDAPLCIGNCFPDVSSTIPDVFVHREIAPFHVVMLSLIDTFRS
Sbjct: 61  PDAPLCIGNCFPDVSSTIPDVFVHREIAPFHVVMLSLIDTFRS 103

[Close]
BLAST of IVF0022768 vs. NCBI nr
Match: TYK28456.1 (subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 1.17e-09
Identity = 29/59 (49.15%), Postives = 37/59 (62.71%), Query Frame = 0 

Query: 28 NVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPLCIGNCFPDVSSTIPDVFVHRE 86
          +++ D+VGR V   P LVT  + +S  VSSD LPD   CI N  PDV +T  DVF+ RE
Sbjct: 12 DIDNDNVGRSVLSMPLLVTHQESLSLRVSSDDLPDVAFCIENSVPDVINTYVDVFMRRE 70

[Close]
BLAST of IVF0022768 vs. NCBI nr
Match: KAA0058107.1 (subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 2.34e-09
Identity = 34/78 (43.59%), Postives = 45/78 (57.69%), Query Frame = 0 

Query: 6   IPDSLLTSGMTMSGIHYFRRINNVEKDDVGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPL 65
           +P   LT  + MS +   R   +++ D+VGR VF  P LVT  + +S  VSSD LPD   
Sbjct: 46  VPWPHLTLELWMSEMPCRRCTVDIDNDNVGRSVFSMPLLVTHQESLSLRVSSDDLPDVAF 105

Query: 66  CIGNCFPDVSSTIPDVFV 83
           CI N  PDV +T  DVF+
Sbjct: 106 CIENSVPDVINTYVDVFM 123

[Close]
BLAST of IVF0022768 vs. NCBI nr
Match: KAA0056492.1 (subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa] >TYK29031.1 subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa])

HSP 1 Score: 51.2 bits (121), Expect = 3.92e-06
Identity = 27/55 (49.09%), Postives = 32/55 (58.18%), Query Frame = 0 

Query: 32 DDVGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPLCIGNCFPDVSSTIPDVFVHRE 86
          +D+G  V     LVTR +  SRH+SSDGL D   CI N   DV  T  +VFV RE
Sbjct: 2  EDIGNTVVPNAVLVTRQESASRHISSDGLLDVYSCIKNLILDVIYTSVNVFVRRE 56

[Close]
BLAST of IVF0022768 vs. NCBI nr
Match: KAA0067475.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 52.0 bits (123), Expect = 1.53e-05
Identity = 23/40 (57.50%), Postives = 27/40 (67.50%), Query Frame = 0 

Query: 34  VGRRVFLTPCLVTRPKKVSRHVSSDGLPDAPLCIGNCFPD 73
           + R   L   LVTR +KVSR +S DGLPD P C+GN FPD
Sbjct: 114 ISREGVLDALLVTRREKVSRRISLDGLPDVPFCVGNWFPD 153

The following BLAST results are available for this feature:
BLAST of IVF0022768 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0022768 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DCP62.6e-5299.03Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5A7UTP87.5e-0743.59Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A5D3DXG91.3e-0647.62Subtilisin-like protease SBT4.14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5A7VP887.8e-0457.50CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
BLAST of IVF0022768 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0051817.12.35e-6999.03subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa] >TYK21427.1 subtilis... [more]
TYK28456.11.17e-0949.15subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa][more]
KAA0058107.12.34e-0943.59subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa][more]
KAA0056492.13.92e-0649.09subtilisin-like protease SBT4.14 [Cucumis melo var. makuwa] >TYK29031.1 subtilis... [more]
KAA0067475.11.53e-0557.50CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
BLAST of IVF0022768 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0022768.1IVF0022768.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0008233 peptidase activity