IVF0022751 (gene) Melon (IVF77) v1

Overview


Name	IVF0022751
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	MADS-box protein SOC1
Location	chr11: 30656096 .. 30656374 (+)
RNA-Seq Expression	IVF0022751
Synteny	IVF0022751

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGAGGAAAGACACAGATGAGGTTAATAGAGAACGCTACAAGCCGTCAAGTCACCTTCTCCAAGAGGAGAAATGGTTTGATGAAAAAAGCTTTTGAGTTATCGGTTCTCTGTGATGCTGAAGTTGCTCTTATCATCTTCTCCCCTAGAGGAAAGCTTTATGAATTTGCTAGCTCAAGGTAACTTTTTTTTTTTTTTTTTTAAATCTCTAGCTCTATTCTTTTTGTTACCAATTTTAGCGTGATGGATTGTGATCTGAATTTGAATCTGATCTAA

mRNA sequence

ATGGTGAGAGGAAAGACACAGATGAGGTTAATAGAGAACGCTACAAGCCGTCAAGTCACCTTCTCCAAGAGGAGAAATGGTTTGATGAAAAAAGCTTTTGAGTTATCGGTTCTCTGTGATGCTGAAGTTGCTCTTATCATCTTCTCCCCTAGAGGAAAGCTTTATGAATTTGCTAGCTCAAGCGTGATGGATTGTGATCTGAATTTGAATCTGATCTAA

Coding sequence (CDS)

ATGGTGAGAGGAAAGACACAGATGAGGTTAATAGAGAACGCTACAAGCCGTCAAGTCACCTTCTCCAAGAGGAGAAATGGTTTGATGAAAAAAGCTTTTGAGTTATCGGTTCTCTGTGATGCTGAAGTTGCTCTTATCATCTTCTCCCCTAGAGGAAAGCTTTATGAATTTGCTAGCTCAAGCGTGATGGATTGTGATCTGAATTTGAATCTGATCTAA

Protein sequence

MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSSVMDCDLNLNLI

Homology

[Close]

BLAST of IVF0022751 vs. ExPASy Swiss-Prot
Match: O64645 (MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 9.2e-25
Identity = 56/64 (87.50%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKTQM+ IENATSRQVTFSKRRNGL+KKAFELSVLCDAEV+LIIFSP+GKLYEFASS
Sbjct: 1  MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61 SVMD 65
          ++ D
Sbjct: 61 NMQD 64

[Close]

BLAST of IVF0022751 vs. ExPASy Swiss-Prot
Match: Q38838 (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=1 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 2.7e-24
Identity = 56/61 (91.80%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKT+M+ IENATSRQVTFSKRRNGL+KKAFELSVLCDAEVALIIFSPRGKLYEF+SS
Sbjct: 1  MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 61 S 62
          S
Sbjct: 61 S 61

[Close]

BLAST of IVF0022751 vs. ExPASy Swiss-Prot
Match: Q9XJ60 (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS50 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 6.0e-24
Identity = 55/61 (90.16%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKTQM+ IEN TSRQVTFSKRRNGL+KKAFELSVLCDAEVALI+FSPRGKLYEFAS+
Sbjct: 1  MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60

Query: 61 S 62
          S
Sbjct: 61 S 61

[Close]

BLAST of IVF0022751 vs. ExPASy Swiss-Prot
Match: O82743 (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.0e-23
Identity = 54/62 (87.10%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKT+M+ IENATSRQVTFSKRRNGL+KKAFELSVLCDAEVAL+IFSPR KLYEF+SS
Sbjct: 1  MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60

Query: 61 SV 63
          S+
Sbjct: 61 SI 62

[Close]

BLAST of IVF0022751 vs. ExPASy Swiss-Prot
Match: A2Z9Q7 (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica OX=39946 GN=MADS56 PE=2 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 5.6e-22
Identity = 50/60 (83.33%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRG+T+++ IEN TSRQVTFSKRRNGL+KKAFELSVLCDAEVALI+FSPRG+LYEFAS+
Sbjct: 1  MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60

[Close]

BLAST of IVF0022751 vs. ExPASy TrEMBL
Match: A0A6P8CZN4 (MADS-box protein SOC1-like OS=Punica granatum OX=22663 GN=LOC116202227 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.1e-24
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKTQMR IENATSRQVTFSKRRNGL+KKAFELSVLCDAEVAL+IFSPRGKLYEFASS
Sbjct: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRGKLYEFASS 60

Query: 61 SVMD 65
          SV D
Sbjct: 61 SVQD 64

[Close]

BLAST of IVF0022751 vs. ExPASy TrEMBL
Match: A0A6J1CRU8 (MADS-box protein SOC1 OS=Momordica charantia OX=3673 GN=LOC111013696 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.1e-24
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS
Sbjct: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60

Query: 61 SV 63
          S+
Sbjct: 61 SM 62

[Close]

BLAST of IVF0022751 vs. ExPASy TrEMBL
Match: A0A218VY28 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr028698 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.1e-24
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKTQMR IENATSRQVTFSKRRNGL+KKAFELSVLCDAEVAL+IFSPRGKLYEFASS
Sbjct: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRGKLYEFASS 60

Query: 61 SVMD 65
          SV D
Sbjct: 61 SVQD 64

[Close]

BLAST of IVF0022751 vs. ExPASy TrEMBL
Match: A0A2I0JKX1 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_022680 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.1e-24
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKTQMR IENATSRQVTFSKRRNGL+KKAFELSVLCDAEVAL+IFSPRGKLYEFASS
Sbjct: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRGKLYEFASS 60

Query: 61 SVMD 65
          SV D
Sbjct: 61 SVQD 64

[Close]

BLAST of IVF0022751 vs. ExPASy TrEMBL
Match: A0A1S3CD40 (MADS-box protein SOC1-like OS=Cucumis melo OX=3656 GN=LOC103499042 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.1e-24
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS
Sbjct: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60

Query: 61 SV 63
          S+
Sbjct: 61 SM 62

[Close]

BLAST of IVF0022751 vs. NCBI nr
Match: TYK24488.1 (MADS-box protein SOC1-like [Cucumis melo var. makuwa])

HSP 1 Score: 119 bits (299), Expect = 1.21e-33
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS
Sbjct: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60

Query: 61 SV 62
           V
Sbjct: 61 RV 62

[Close]

BLAST of IVF0022751 vs. NCBI nr
Match: KAA0040014.1 (MADS-box protein SOC1-like [Cucumis melo var. makuwa])

HSP 1 Score: 118 bits (296), Expect = 3.22e-33
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS
Sbjct: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60

[Close]

BLAST of IVF0022751 vs. NCBI nr
Match: XP_008460142.1 (PREDICTED: MADS-box protein SOC1-like [Cucumis melo])

HSP 1 Score: 120 bits (301), Expect = 5.05e-32
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS
Sbjct: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60

Query: 61 SV 62
          S+
Sbjct: 61 SM 62

[Close]

BLAST of IVF0022751 vs. NCBI nr
Match: OWM64980.1 (hypothetical protein CDL15_Pgr028698 [Punica granatum])

HSP 1 Score: 120 bits (300), Expect = 5.25e-32
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKTQMR IENATSRQVTFSKRRNGL+KKAFELSVLCDAEVAL+IFSPRGKLYEFASS
Sbjct: 1  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRGKLYEFASS 60

Query: 61 SVMD 64
          SV D
Sbjct: 61 SVQD 64

[Close]

BLAST of IVF0022751 vs. NCBI nr
Match: XP_022143898.1 (MADS-box protein SOC1 [Momordica charantia])

HSP 1 Score: 120 bits (301), Expect = 5.31e-32
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS
Sbjct: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60

Query: 61 SV 62
          S+
Sbjct: 61 SM 62

[Close]

BLAST of IVF0022751 vs. TAIR 10
Match: AT2G45660.1 (AGAMOUS-like 20 )

HSP 1 Score: 113.6 bits (283), Expect = 6.5e-26
Identity = 56/64 (87.50%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKTQM+ IENATSRQVTFSKRRNGL+KKAFELSVLCDAEV+LIIFSP+GKLYEFASS
Sbjct: 1  MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61 SVMD 65
          ++ D
Sbjct: 61 NMQD 64

[Close]

BLAST of IVF0022751 vs. TAIR 10
Match: AT4G11880.1 (AGAMOUS-like 14 )

HSP 1 Score: 112.1 bits (279), Expect = 1.9e-25
Identity = 56/61 (91.80%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKT+M+ IENATSRQVTFSKRRNGL+KKAFELSVLCDAEVALIIFSPRGKLYEF+SS
Sbjct: 1  MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 61 S 62
          S
Sbjct: 61 S 61

[Close]

BLAST of IVF0022751 vs. TAIR 10
Match: AT4G22950.1 (AGAMOUS-like 19 )

HSP 1 Score: 110.2 bits (274), Expect = 7.2e-25
Identity = 54/62 (87.10%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGKT+M+ IENATSRQVTFSKRRNGL+KKAFELSVLCDAEVAL+IFSPR KLYEF+SS
Sbjct: 1  MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60

Query: 61 SV 63
          S+
Sbjct: 61 SI 62

[Close]

BLAST of IVF0022751 vs. TAIR 10
Match: AT5G62165.1 (AGAMOUS-like 42 )

HSP 1 Score: 99.4 bits (246), Expect = 1.3e-21
Identity = 48/62 (77.42%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGK +M+ IENATSRQVTFSKRRNGL+KKA+ELSVLCDA+++LIIFS RG+LYEF+SS
Sbjct: 1  MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61 SV 63
           +
Sbjct: 61 DM 62

[Close]

BLAST of IVF0022751 vs. TAIR 10
Match: AT5G62165.2 (AGAMOUS-like 42 )

HSP 1 Score: 99.4 bits (246), Expect = 1.3e-21
Identity = 48/62 (77.42%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS 60
          MVRGK +M+ IENATSRQVTFSKRRNGL+KKA+ELSVLCDA+++LIIFS RG+LYEF+SS
Sbjct: 1  MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61 SV 63
           +
Sbjct: 61 DM 62

The following BLAST results are available for this feature:

BLAST of IVF0022751 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64645	9.2e-25	87.50	MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1	[more]
Q38838	2.7e-24	91.80	Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=...	[more]
Q9XJ60	6.0e-24	90.16	MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
O82743	1.0e-23	87.10	Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=...	[more]
A2Z9Q7	5.6e-22	83.33	MADS-box transcription factor 56 OS=Oryza sativa subsp. indica OX=39946 GN=MADS5...	[more]

BLAST of IVF0022751 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P8CZN4	8.1e-24	93.75	MADS-box protein SOC1-like OS=Punica granatum OX=22663 GN=LOC116202227 PE=4 SV=1	[more]
A0A6J1CRU8	8.1e-24	98.39	MADS-box protein SOC1 OS=Momordica charantia OX=3673 GN=LOC111013696 PE=4 SV=1	[more]
A0A218VY28	8.1e-24	93.75	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr028698 PE=4 SV=1	[more]
A0A2I0JKX1	8.1e-24	93.75	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_022680 PE=4 SV=1	[more]
A0A1S3CD40	8.1e-24	98.39	MADS-box protein SOC1-like OS=Cucumis melo OX=3656 GN=LOC103499042 PE=4 SV=1	[more]

BLAST of IVF0022751 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK24488.1	1.21e-33	98.39	MADS-box protein SOC1-like [Cucumis melo var. makuwa]	[more]
KAA0040014.1	3.22e-33	100.00	MADS-box protein SOC1-like [Cucumis melo var. makuwa]	[more]
XP_008460142.1	5.05e-32	98.39	PREDICTED: MADS-box protein SOC1-like [Cucumis melo]	[more]
OWM64980.1	5.25e-32	93.75	hypothetical protein CDL15_Pgr028698 [Punica granatum]	[more]
XP_022143898.1	5.31e-32	98.39	MADS-box protein SOC1 [Momordica charantia]	[more]

BLAST of IVF0022751 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45660.1	6.5e-26	87.50	AGAMOUS-like 20	[more]
AT4G11880.1	1.9e-25	91.80	AGAMOUS-like 14	[more]
AT4G22950.1	7.2e-25	87.10	AGAMOUS-like 19	[more]
AT5G62165.1	1.3e-21	77.42	AGAMOUS-like 42	[more]
AT5G62165.2	1.3e-21	77.42	AGAMOUS-like 42	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 80.69 coord: 38..59 score: 68.47 coord: 3..23 score: 59.41
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.4E-40 score: 150.9
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..57 e-value: 7.0E-28 score: 95.9
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 30.992022
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..68 e-value: 7.0E-28 score: 98.3
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 3..64
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..62
None	No IPR available	PANTHER	PTHR11945:SF341	MADS-BOX PROTEIN SOC1	coord: 1..62
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 3..62 e-value: 6.60211E-40 score: 123.817

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0022751.2	IVF0022751.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding