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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCCAAGGGCCAACGGAGTGAGGAATGTGGCTTCGTGGCCTTGGGTATAAATGGAGTCAACATGGGTAGATTCAAGGTCTTGGGTACAAATGGTCAATGGTTGGCTTATCTAGAAGAGTTTAGAGATTTGACAGCGAGATCTTTGGTAAATGGCCAAGAATCACTACCTTTGAAAGGGTTGTTGTGGTACTGTAGTAGTATGGGTTGGAATGAGTTGAGGGCAAGGGCTGTAGCTTTCCTTCCTTGA mRNA sequence ATGGCCAAGGGCCAACGGAGTGAGGAATGTGGCTTCGTGGCCTTGGGTATAAATGGAGTCAACATGGGTAGATTCAAGGTCTTGGGTACAAATGGTCAATGGTTGGCTTATCTAGAAGAGTTTAGAGATTTGACAGCGAGATCTTTGGTAAATGGCCAAGAATCACTACCTTTGAAAGGGTTGTTGTGGTACTGTAGTAGTATGGGTTGGAATGAGTTGAGGGCAAGGGCTGTAGCTTTCCTTCCTTGA Coding sequence (CDS) ATGGCCAAGGGCCAACGGAGTGAGGAATGTGGCTTCGTGGCCTTGGGTATAAATGGAGTCAACATGGGTAGATTCAAGGTCTTGGGTACAAATGGTCAATGGTTGGCTTATCTAGAAGAGTTTAGAGATTTGACAGCGAGATCTTTGGTAAATGGCCAAGAATCACTACCTTTGAAAGGGTTGTTGTGGTACTGTAGTAGTATGGGTTGGAATGAGTTGAGGGCAAGGGCTGTAGCTTTCCTTCCTTGA Protein sequence MAKGQRSEECGFVALGINGVNMGRFKVLGTNGQWLAYLEEFRDLTARSLVNGQESLPLKGLLWYCSSMGWNELRARAVAFLP
Homology
BLAST of IVF0022718 vs. ExPASy TrEMBL
Match: A0A5A7T4R5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold119G00390 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.1e-40 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query: 1 MAKGQRSEECGFVALGINGVNMGRFKVLGTNGQWLAYLEEFRDLTARSLVNGQESLPLKG 60
MAKGQRSEECGFVALGINGVNMGRFKVLGTNGQWLAYLEEFRDLTARSLVNGQESLPLKG
Sbjct: 1 MAKGQRSEECGFVALGINGVNMGRFKVLGTNGQWLAYLEEFRDLTARSLVNGQESLPLKG 60
Query: 61 LLWYCSSMGWNELRARAVAFLP 83
LLWYCSSMGWNELRARAVAFLP
Sbjct: 61 LLWYCSSMGWNELRARAVAFLP 82
BLAST of IVF0022718 vs. ExPASy TrEMBL
Match: A0A0A0KD09 (CX9C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G361270 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06 Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0
Query: 46 ARSLVNGQESLPLKGLLWYCSSMGWNELRARA 78
ARSLVNGQESL LKG+LW CSSMGWNE+RARA
Sbjct: 2 ARSLVNGQESLCLKGVLWCCSSMGWNEIRARA 33
BLAST of IVF0022718 vs. NCBI nr
Match: KAA0038472.1 (hypothetical protein E6C27_scaffold119G00390 [Cucumis melo var. makuwa]) HSP 1 Score: 172 bits (435), Expect = 5.38e-54 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query: 1 MAKGQRSEECGFVALGINGVNMGRFKVLGTNGQWLAYLEEFRDLTARSLVNGQESLPLKG 60
MAKGQRSEECGFVALGINGVNMGRFKVLGTNGQWLAYLEEFRDLTARSLVNGQESLPLKG
Sbjct: 1 MAKGQRSEECGFVALGINGVNMGRFKVLGTNGQWLAYLEEFRDLTARSLVNGQESLPLKG 60
Query: 61 LLWYCSSMGWNELRARAVAFLP 82
LLWYCSSMGWNELRARAVAFLP
Sbjct: 61 LLWYCSSMGWNELRARAVAFLP 82
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| A0A5A7T4R5 | 1.1e-40 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A0A0KD09 | 1.0e-06 | 87.50 | CX9C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G361270 PE=4 S... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0038472.1 | 5.38e-54 | 100.00 | hypothetical protein E6C27_scaffold119G00390 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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