IVF0022653 (gene) Melon (IVF77) v1

Overview
NameIVF0022653
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr03: 4229633 .. 4229920 (+)
RNA-Seq ExpressionIVF0022653
SyntenyIVF0022653
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTGTTCAACTGCCAATATTCTTATTTTGACTATTTTTGTAGCATCCATAGCTCTTAGGCTACCGTCGGAAACCACCGCAAGAGCCATCGCCGACCCTTATCCTCTGTCATGGCCGTGGTTGCCGATATACAATACGCTAATGAAAGTCAGGCTTAATGATGAAGCAGGGTCAGGAGAGGAAAATGGAGATGATGAATCTGATCCACCTTCGAAGGAAGCAAAGAGCAGCAGAAAACCTTGGCCAAAGAATCCTGTCTCTAAATCTCCACCACCACCATTTTAG

mRNA sequence

ATGGGCTGTTCAACTGCCAATATTCTTATTTTGACTATTTTTGTAGCATCCATAGCTCTTAGGCTACCGTCGGAAACCACCGCAAGAGCCATCGCCGACCCTTATCCTCTGTCATGGCCGTGGTTGCCGATATACAATACGCTAATGAAAGTCAGGCTTAATGATGAAGCAGGGTCAGGAGAGGAAAATGGAGATGATGAATCTGATCCACCTTCGAAGGAAGCAAAGAGCAGCAGAAAACCTTGGCCAAAGAATCCTGTCTCTAAATCTCCACCACCACCATTTTAG

Coding sequence (CDS)

ATGGGCTGTTCAACTGCCAATATTCTTATTTTGACTATTTTTGTAGCATCCATAGCTCTTAGGCTACCGTCGGAAACCACCGCAAGAGCCATCGCCGACCCTTATCCTCTGTCATGGCCGTGGTTGCCGATATACAATACGCTAATGAAAGTCAGGCTTAATGATGAAGCAGGGTCAGGAGAGGAAAATGGAGATGATGAATCTGATCCACCTTCGAAGGAAGCAAAGAGCAGCAGAAAACCTTGGCCAAAGAATCCTGTCTCTAAATCTCCACCACCACCATTTTAG

Protein sequence

MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWLPIYNTLMKVRLNDEAGSGEENGDDESDPPSKEAKSSRKPWPKNPVSKSPPPPF
Homology
BLAST of IVF0022653 vs. ExPASy TrEMBL
Match: A0A5A7UIB8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00190 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.4e-45
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0

Query: 1  MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWLPIYNTLMKVRLNDEAGSG 60
          MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWLPIYNTLMKVRLNDEAGSG
Sbjct: 1  MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWLPIYNTLMKVRLNDEAGSG 60

Query: 61 EENGDDESDPPSKEAKSSRKPWPKNPVSKSPPPPF 96
          EENGDDESDPPSKEAKSSRKPWPKNPVSKSPPPPF
Sbjct: 61 EENGDDESDPPSKEAKSSRKPWPKNPVSKSPPPPF 95

BLAST of IVF0022653 vs. ExPASy TrEMBL
Match: A0A0A0K9K2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058720 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.8e-38
Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 0

Query: 1  MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWLPIYNTLMKVRLNDEAGSG 60
          MGCSTANI+ILTIFVASIALRLP+ETTARAIADPYPLSWP L IYNT+MKVRLNDEAGSG
Sbjct: 1  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLLIYNTVMKVRLNDEAGSG 60

Query: 61 EENGDDESDPPSKEAKSSRKPWPKNPVSKSPPPPF 96
          E +GDDESDPP KE K SRKPWPKNPVSKSPPPPF
Sbjct: 61 EGSGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF 95

BLAST of IVF0022653 vs. NCBI nr
Match: KAA0054914.1 (hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa] >TYK22702.1 hypothetical protein E5676_scaffold1163G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 189 bits (479), Expect = 2.66e-60
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0

Query: 1  MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWLPIYNTLMKVRLNDEAGSG 60
          MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWLPIYNTLMKVRLNDEAGSG
Sbjct: 1  MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWLPIYNTLMKVRLNDEAGSG 60

Query: 61 EENGDDESDPPSKEAKSSRKPWPKNPVSKSPPPPF 95
          EENGDDESDPPSKEAKSSRKPWPKNPVSKSPPPPF
Sbjct: 61 EENGDDESDPPSKEAKSSRKPWPKNPVSKSPPPPF 95

BLAST of IVF0022653 vs. NCBI nr
Match: KAE8637368.1 (hypothetical protein CSA_004461, partial [Cucumis sativus])

HSP 1 Score: 149 bits (375), Expect = 1.49e-44
Identity = 76/86 (88.37%), Postives = 80/86 (93.02%), Query Frame = 0

Query: 1  MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWLPIYNTLMKVRLNDEAGSG 60
          MGCSTANI+ILTIFVASIALRLP+ETTARAIADPYPLSWP L IYNT+MKVRLNDEAGSG
Sbjct: 1  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLLIYNTVMKVRLNDEAGSG 60

Query: 61 EENGDDESDPPSKEAKSSRKPWPKNP 86
          E +GDDESDPP KE K SRKPWPKNP
Sbjct: 61 EGSGDDESDPPLKEEKGSRKPWPKNP 86

BLAST of IVF0022653 vs. NCBI nr
Match: KAE8646678.1 (hypothetical protein Csa_023589, partial [Cucumis sativus])

HSP 1 Score: 139 bits (350), Expect = 7.86e-41
Identity = 70/79 (88.61%), Postives = 73/79 (92.41%), Query Frame = 0

Query: 17 SIALRLPSETTARAIADPYPLSWPWLPIYNTLMKVRLNDEAGSGEENGDDESDPPSKEAK 76
          SIALRLP+ETTARAIADPYPLSWP L IYNT+MKVRLNDEAGSGE +GDDESDPP KE K
Sbjct: 1  SIALRLPTETTARAIADPYPLSWPRLLIYNTVMKVRLNDEAGSGEGSGDDESDPPLKEEK 60

Query: 77 SSRKPWPKNPVSKSPPPPF 95
           SRKPWPKNPVSKSPPPPF
Sbjct: 61 GSRKPWPKNPVSKSPPPPF 79

BLAST of IVF0022653 vs. NCBI nr
Match: KAG6578899.1 (hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 81.6 bits (200), Expect = 1.06e-17
Identity = 55/107 (51.40%), Postives = 68/107 (63.55%), Query Frame = 0

Query: 1   MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWLPIYNTL---------MKV 60
           MG STAN+ I+ I VASIALR PS TTA A+  P PL     PIY++          +K+
Sbjct: 1   MGYSTANLFIV-ILVASIALRPPSATTASAVVGPSPLP---PPIYHSASGTLSFGRYIKI 60

Query: 61  RLNDEAGSGEENGDDESDPP---SKEAKSSRKPWPKNPVSKSPPPPF 95
            L  +AG   ENG+DES+PP   SK  +  R+PWPK PV+KSPPPPF
Sbjct: 61  SLEGKAGPVVENGEDESEPPPPSSKVRRGPRRPWPKKPVAKSPPPPF 103

BLAST of IVF0022653 vs. NCBI nr
Match: KAG6578898.1 (hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 67.0 bits (162), Expect = 5.04e-12
Identity = 49/102 (48.04%), Postives = 61/102 (59.80%), Query Frame = 0

Query: 1  MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWLP------IYNTLMKVRLN 60
          MG STAN L+  I VASIALRLP E  A A+  P PL  P         ++   +KV L 
Sbjct: 1  MGYSTAN-LMFGILVASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLT 60

Query: 61 DEAGSGEENGDDESDPPS-KEAKSSRKPWPKNPVSKSPPPPF 95
           +A     +G+DE++ PS K+ K  RKPWPK PV K+PPPPF
Sbjct: 61 VKA-----SGEDEAEAPSSKDEKGRRKPWPKQPVPKAPPPPF 96

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UIB86.4e-45100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K9K25.8e-3889.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058720 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0054914.12.66e-60100.00hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa] >TYK22... [more]
KAE8637368.11.49e-4488.37hypothetical protein CSA_004461, partial [Cucumis sativus][more]
KAE8646678.17.86e-4188.61hypothetical protein Csa_023589, partial [Cucumis sativus][more]
KAG6578899.11.06e-1751.40hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6578898.15.04e-1248.04hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..95

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0022653.1IVF0022653.1mRNA