IVF0022605 (gene) Melon (IVF77) v1

Overview


Name	IVF0022605
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	GDSL esterase/lipase
Location	chr07: 19863903 .. 19864193 (+)
RNA-Seq Expression	IVF0022605
Synteny	IVF0022605

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTGACACTTATTGGTTGTGCTCCTTTCTACTTATGGAAGTATTGTAGTGAGAATGGAGTGTGTATTGAGGAGATAAATGATATGGTTATGGAGTTCAACTTTGCCATGAGATACATGGTCGAAGAGCTCAACACGGAGCTGCCCGATTCGAGTATAATCTTATGTGATTTGCTTCAATATTCAATGAATATCTTGAAGAATAATGAATATTATGGTGTAAATGACAATCTAACTTCTTTTCACACTCTTCACCATGATCCAAATTTGTCTCTCTCATTGTGTTAG

mRNA sequence

ATGGGATTGACACTTATTGGTTGTGCTCCTTTCTACTTATGGAAGTATTGTAGTGAGAATGGAGTGTGTATTGAGGAGATAAATGATATGGTTATGGAGTTCAACTTTGCCATGAGATACATGGTCGAAGAGCTCAACACGGAGCTGCCCGATTCGAGTATAATCTTATGTGATTTGCTTCAATATTCAATGAATATCTTGAAGAATAATGAATATTATGGTGTAAATGACAATCTAACTTCTTTTCACACTCTTCACCATGATCCAAATTTGTCTCTCTCATTGTGTTAG

Coding sequence (CDS)

ATGGGATTGACACTTATTGGTTGTGCTCCTTTCTACTTATGGAAGTATTGTAGTGAGAATGGAGTGTGTATTGAGGAGATAAATGATATGGTTATGGAGTTCAACTTTGCCATGAGATACATGGTCGAAGAGCTCAACACGGAGCTGCCCGATTCGAGTATAATCTTATGTGATTTGCTTCAATATTCAATGAATATCTTGAAGAATAATGAATATTATGGTGTAAATGACAATCTAACTTCTTTTCACACTCTTCACCATGATCCAAATTTGTCTCTCTCATTGTGTTAG

Protein sequence

MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLLQYSMNILKNNEYYGVNDNLTSFHTLHHDPNLSLSLC

Homology

[Close]

BLAST of IVF0022605 vs. ExPASy Swiss-Prot
Match: Q9SF78 (GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana OX=3702 GN=At1g71691 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.4e-06
Identity = 26/74 (35.14%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 2   GLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLLQ 61
           GL  +GC P  L +    +G C EE+N +V+ FN  ++ M+  LN  LPD+  I  D+  
Sbjct: 241 GLGRMGCIPSILAQ--GNDGKCSEEVNQLVLPFNTNVKTMISNLNQNLPDAKFIYLDIAH 300

Query: 62  YSMNILKNNEYYGV 76
              +I+ N   YG+
Sbjct: 301 MFEDIVANQAAYGL 312

[Close]

BLAST of IVF0022605 vs. ExPASy TrEMBL
Match: A0A5A7TP35 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003990 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 8.8e-50
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL 60
          MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL
Sbjct: 1  MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL 60

Query: 61 QYSMNILKNNEYYGVNDNLTSFHTLHHDPNLSLSLC 97
          QYSMNILKNNEYYGVNDNLTSFHTLHHDPNLSLSLC
Sbjct: 61 QYSMNILKNNEYYGVNDNLTSFHTLHHDPNLSLSLC 96

[Close]

BLAST of IVF0022605 vs. ExPASy TrEMBL
Match: A0A5A7TNJ7 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002190 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.5e-44
Identity = 87/96 (90.62%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL 60
          MGLTLIGCAPFYLWKYCSENG CIE+INDMVMEFNFAMRYMVEELNTELPDSSII CDLL
Sbjct: 1  MGLTLIGCAPFYLWKYCSENGACIEKINDMVMEFNFAMRYMVEELNTELPDSSIIFCDLL 60

Query: 61 QYSMNILKNNEYYGVNDNLTSFHTLHHDPNLSLSLC 97
          Q SM+I KNNEYYGVNDNLTSFH+ H+DPNLSLSLC
Sbjct: 61 QDSMDISKNNEYYGVNDNLTSFHSFHYDPNLSLSLC 96

[Close]

BLAST of IVF0022605 vs. ExPASy TrEMBL
Match: A0A5A7UZU1 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00560 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.2e-28
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1   MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL 60
           MGL  IGCAPFYLW+Y SENG CIEEINDMVMEFNFAMRYMVEEL  ELPDSSII CDLL
Sbjct: 257 MGLAPIGCAPFYLWQYRSENGACIEEINDMVMEFNFAMRYMVEELGMELPDSSIIFCDLL 316

Query: 61  QYSMNILKNNEYYGVN 77
           + SM+ILKN+EYYG N
Sbjct: 317 EGSMDILKNHEYYGFN 332

[Close]

BLAST of IVF0022605 vs. ExPASy TrEMBL
Match: A0A1S3BSQ9 (GDSL esterase/lipase At1g71691-like OS=Cucumis melo OX=3656 GN=LOC103493303 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.2e-28
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1   MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL 60
           MGL  IGCAPFYLW+Y SENG CIEEINDMVMEFNFAMRYMVEEL  ELPDSSII CDLL
Sbjct: 257 MGLAPIGCAPFYLWQYRSENGACIEEINDMVMEFNFAMRYMVEELGMELPDSSIIFCDLL 316

Query: 61  QYSMNILKNNEYYGVN 77
           + SM+ILKN+EYYG N
Sbjct: 317 EGSMDILKNHEYYGFN 332

[Close]

BLAST of IVF0022605 vs. ExPASy TrEMBL
Match: A0A0A0L7F0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270280 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-27
Identity = 62/76 (81.58%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1   MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL 60
           MGL  IGCAPFYLW+Y SENG CIEEINDMVMEFNFAMRY+VEEL  ELPDS+II CDLL
Sbjct: 255 MGLAPIGCAPFYLWQYRSENGACIEEINDMVMEFNFAMRYVVEELGMELPDSNIIFCDLL 314

Query: 61  QYSMNILKNNEYYGVN 77
           Q SM+ILKN+EYYG N
Sbjct: 315 QGSMDILKNHEYYGFN 330

[Close]

BLAST of IVF0022605 vs. NCBI nr
Match: KAA0044894.1 (GDSL esterase/lipase [Cucumis melo var. makuwa] >TYK16577.1 GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 206 bits (525), Expect = 2.73e-67
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL 60
          MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL
Sbjct: 1  MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL 60

Query: 61 QYSMNILKNNEYYGVNDNLTSFHTLHHDPNLSLSLC 96
          QYSMNILKNNEYYGVNDNLTSFHTLHHDPNLSLSLC
Sbjct: 61 QYSMNILKNNEYYGVNDNLTSFHTLHHDPNLSLSLC 96

[Close]

BLAST of IVF0022605 vs. NCBI nr
Match: KAA0044922.1 (GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 188 bits (478), Expect = 4.06e-60
Identity = 87/96 (90.62%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL 60
          MGLTLIGCAPFYLWKYCSENG CIE+INDMVMEFNFAMRYMVEELNTELPDSSII CDLL
Sbjct: 1  MGLTLIGCAPFYLWKYCSENGACIEKINDMVMEFNFAMRYMVEELNTELPDSSIIFCDLL 60

Query: 61 QYSMNILKNNEYYGVNDNLTSFHTLHHDPNLSLSLC 96
          Q SM+I KNNEYYGVNDNLTSFH+ H+DPNLSLSLC
Sbjct: 61 QDSMDISKNNEYYGVNDNLTSFHSFHYDPNLSLSLC 96

[Close]

BLAST of IVF0022605 vs. NCBI nr
Match: XP_008452220.1 (PREDICTED: GDSL esterase/lipase At1g71691-like [Cucumis melo] >KAA0060544.1 GDSL esterase/lipase [Cucumis melo var. makuwa] >TYK00787.1 GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 135 bits (341), Expect = 7.37e-36
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1   MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL 60
           MGL  IGCAPFYLW+Y SENG CIEEINDMVMEFNFAMRYMVEEL  ELPDSSII CDLL
Sbjct: 257 MGLAPIGCAPFYLWQYRSENGACIEEINDMVMEFNFAMRYMVEELGMELPDSSIIFCDLL 316

Query: 61  QYSMNILKNNEYYGVN 76
           + SM+ILKN+EYYG N
Sbjct: 317 EGSMDILKNHEYYGFN 332

[Close]

BLAST of IVF0022605 vs. NCBI nr
Match: XP_004145656.2 (GDSL esterase/lipase At1g71691 [Cucumis sativus] >KGN57733.1 hypothetical protein Csa_010616 [Cucumis sativus])

HSP 1 Score: 134 bits (337), Expect = 2.75e-35
Identity = 62/76 (81.58%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1   MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL 60
           MGL  IGCAPFYLW+Y SENG CIEEINDMVMEFNFAMRY+VEEL  ELPDS+II CDLL
Sbjct: 255 MGLAPIGCAPFYLWQYRSENGACIEEINDMVMEFNFAMRYVVEELGMELPDSNIIFCDLL 314

Query: 61  QYSMNILKNNEYYGVN 76
           Q SM+ILKN+EYYG N
Sbjct: 315 QGSMDILKNHEYYGFN 330

[Close]

BLAST of IVF0022605 vs. NCBI nr
Match: XP_038904573.1 (GDSL esterase/lipase At1g71691 [Benincasa hispida])

HSP 1 Score: 132 bits (333), Expect = 1.01e-34
Identity = 63/76 (82.89%), Postives = 66/76 (86.84%), Query Frame = 0


Query: 1   MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL 60
           MGL  IGCAPFYLW+Y SENG CIEEINDMVMEFNFAMRYMVEEL  ELPDSSII CDLL
Sbjct: 252 MGLAPIGCAPFYLWQYGSENGECIEEINDMVMEFNFAMRYMVEELGMELPDSSIIFCDLL 311

Query: 61  QYSMNILKNNEYYGVN 76
           Q SM+ILKN+E YG N
Sbjct: 312 QGSMDILKNHERYGFN 327

[Close]

BLAST of IVF0022605 vs. TAIR 10
Match: AT4G10950.1 (SGNH hydrolase-type esterase superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 2.8e-24
Identity = 46/77 (59.74%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 1   MGLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLL 60
           MGL  IGCAP+Y+WKY S+NG C EE+N M+ME NF MRY V++LN ELP +SII CD+ 
Sbjct: 254 MGLPPIGCAPYYMWKYRSQNGECAEEVNSMIMESNFVMRYTVDKLNRELPGASIIYCDVF 313

Query: 61  QYSMNILKNNEYYGVND 78
           Q +M+IL+N+++YG N+
Sbjct: 314 QSAMDILRNHQHYGFNE 330

[Close]

BLAST of IVF0022605 vs. TAIR 10
Match: AT1G71691.2 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 3.1e-07
Identity = 26/74 (35.14%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 2   GLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLLQ 61
           GL  +GC P  L +    +G C EE+N +V+ FN  ++ M+  LN  LPD+  I  D+  
Sbjct: 241 GLGRMGCIPSILAQ--GNDGKCSEEVNQLVLPFNTNVKTMISNLNQNLPDAKFIYLDIAH 300

Query: 62  YSMNILKNNEYYGV 76
              +I+ N   YG+
Sbjct: 301 MFEDIVANQAAYGL 312

[Close]

BLAST of IVF0022605 vs. TAIR 10
Match: AT1G71691.1 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 3.1e-07
Identity = 26/74 (35.14%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 2   GLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLLQ 61
           GL  +GC P  L +    +G C EE+N +V+ FN  ++ M+  LN  LPD+  I  D+  
Sbjct: 140 GLGRMGCIPSILAQ--GNDGKCSEEVNQLVLPFNTNVKTMISNLNQNLPDAKFIYLDIAH 199

Query: 62  YSMNILKNNEYYGV 76
              +I+ N   YG+
Sbjct: 200 MFEDIVANQAAYGL 211

[Close]

BLAST of IVF0022605 vs. TAIR 10
Match: AT5G37690.1 (SGNH hydrolase-type esterase superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 1.1e-04
Identity = 21/73 (28.77%), Postives = 38/73 (52.05%), Query Frame = 0


Query: 2   GLTLIGCAPFYLWKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLLQ 61
           GL  +GC P    K  S+  +C+  +N+ V+EFN   + ++ +LN  LP +     D   
Sbjct: 216 GLGPLGCIPSQRVK--SKTRMCLNRVNEWVLEFNSRTKKLLIDLNKRLPGAKFSFADTYP 275

Query: 62  YSMNILKNNEYYG 75
             ++++ N  +YG
Sbjct: 276 AVLDLINNPTHYG 286

[Close]

BLAST of IVF0022605 vs. TAIR 10
Match: AT1G56670.1 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 40.8 bits (94), Expect = 7.2e-04
Identity = 25/78 (32.05%), Postives = 38/78 (48.72%), Query Frame = 0


Query: 6   IGCAPFYL----WKYCSENGVCIEEINDMVMEFNFAMRYMVEELNTELPDSSIILCDLLQ 65
           +GC P  L     K   ++G C+   N     FN  + +M EEL TEL D++II  D+  
Sbjct: 226 LGCLPQKLSMVKSKDLDQHG-CLVSYNSAATLFNQGLDHMCEELRTELRDATIIYIDIYA 285

Query: 66  YSMNILKNNEYYGVNDNL 80
              +++ N+  YG    L
Sbjct: 286 IKYSLIANSNQYGFKSPL 302

The following BLAST results are available for this feature:

BLAST of IVF0022605 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SF78	4.4e-06	35.14	GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana OX=3702 GN=At1g71691 PE=2...	[more]

BLAST of IVF0022605 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TP35	8.8e-50	100.00	GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G...	[more]
A0A5A7TNJ7	2.5e-44	90.63	GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G...	[more]
A0A5A7UZU1	4.2e-28	82.89	GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420...	[more]
A0A1S3BSQ9	4.2e-28	82.89	GDSL esterase/lipase At1g71691-like OS=Cucumis melo OX=3656 GN=LOC103493303 PE=3...	[more]
A0A0A0L7F0	1.2e-27	81.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270280 PE=3 SV=1	[more]

BLAST of IVF0022605 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044894.1	2.73e-67	100.00	GDSL esterase/lipase [Cucumis melo var. makuwa] >TYK16577.1 GDSL esterase/lipase...	[more]
KAA0044922.1	4.06e-60	90.63	GDSL esterase/lipase [Cucumis melo var. makuwa]	[more]
XP_008452220.1	7.37e-36	82.89	PREDICTED: GDSL esterase/lipase At1g71691-like [Cucumis melo] >KAA0060544.1 GDSL...	[more]
XP_004145656.2	2.75e-35	81.58	GDSL esterase/lipase At1g71691 [Cucumis sativus] >KGN57733.1 hypothetical protei...	[more]
XP_038904573.1	1.01e-34	82.89	GDSL esterase/lipase At1g71691 [Benincasa hispida]	[more]

BLAST of IVF0022605 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10950.1	2.8e-24	59.74	SGNH hydrolase-type esterase superfamily protein	[more]
AT1G71691.2	3.1e-07	35.14	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT1G71691.1	3.1e-07	35.14	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT5G37690.1	1.1e-04	28.77	SGNH hydrolase-type esterase superfamily protein	[more]
AT1G56670.1	7.2e-04	32.05	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036514	SGNH hydrolase superfamily	GENE3D	3.40.50.1110	SGNH hydrolase	coord: 1..92 e-value: 1.1E-8 score: 36.9
None	No IPR available	PANTHER	PTHR45648:SF13	OS02G0290900 PROTEIN	coord: 1..77
None	No IPR available	PANTHER	PTHR45648	GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700)	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0022605.1	IVF0022605.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds