IVF0022581 (gene) Melon (IVF77) v1

Overview


Name	IVF0022581
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr01: 9224933 .. 9225244 (-)
RNA-Seq Expression	IVF0022581
Synteny	IVF0022581

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAAGGAGCGATGGTACAGACAGGGTAACCACGACGATGAGCGACTGATTTACGAGGATACAACGGTGGCTGGCGCTTTGCAGACAATGAACGAAGAACGTAACGACGATGGTTGGAGCTTCGCTAACAGAGACAAACGCTACGGGGAAGAAGGCAGTGGACAACTAGGCTTGGGTGGAAACGACGGGTCGGAGGCGACGACGCTAAGTGGTTCACAGGGAGAAGAAGAAGATGAAGATGAGAGTGGGGGGCTGCCAGCTGCATGCGTGAGGGTGGAGGAGAAGAAGAAAATAATTTTAGGTTTTTAA

mRNA sequence

ATGAGGAAGGAGCGATGGTACAGACAGGGTAACCACGACGATGAGCGACTGATTTACGAGGATACAACGGTGGCTGGCGCTTTGCAGACAATGAACGAAGAACGTAACGACGATGGTTGGAGCTTCGCTAACAGAGACAAACGCTACGGGGAAGAAGGCAGTGGACAACTAGGCTTGGGTGGAAACGACGGGTCGGAGGCGACGACGCTAAGTGGTTCACAGGGAGAAGAAGAAGATGAAGATGAGAGTGGGGGGCTGCCAGCTGCATGCGTGAGGGTGGAGGAGAAGAAGAAAATAATTTTAGGTTTTTAA

Coding sequence (CDS)

ATGAGGAAGGAGCGATGGTACAGACAGGGTAACCACGACGATGAGCGACTGATTTACGAGGATACAACGGTGGCTGGCGCTTTGCAGACAATGAACGAAGAACGTAACGACGATGGTTGGAGCTTCGCTAACAGAGACAAACGCTACGGGGAAGAAGGCAGTGGACAACTAGGCTTGGGTGGAAACGACGGGTCGGAGGCGACGACGCTAAGTGGTTCACAGGGAGAAGAAGAAGATGAAGATGAGAGTGGGGGGCTGCCAGCTGCATGCGTGAGGGTGGAGGAGAAGAAGAAAATAATTTTAGGTTTTTAA

Protein sequence

MRKERWYRQGNHDDERLIYEDTTVAGALQTMNEERNDDGWSFANRDKRYGEEGSGQLGLGGNDGSEATTLSGSQGEEEDEDESGGLPAACVRVEEKKKIILGF

Homology

[Close]

BLAST of IVF0022581 vs. ExPASy TrEMBL
Match: A0A5D3E6W2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00900 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.1e-37
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MRKERWYRQGNHDDERLIYEDTTVAGALQTMNEERNDDGWSFANRDKRYGEEGSGQLGLG 60
           MRKERWYRQGNHDDERLIYEDTTVAGALQTMNEERNDDGWSFANRDKRYGEEGSGQLGLG
Sbjct: 114 MRKERWYRQGNHDDERLIYEDTTVAGALQTMNEERNDDGWSFANRDKRYGEEGSGQLGLG 173

Query: 61  GNDGSEATTLSGSQGEEEDED 82
           GNDGSEATTLSGSQGEEEDED
Sbjct: 174 GNDGSEATTLSGSQGEEEDED 194

[Close]

BLAST of IVF0022581 vs. ExPASy TrEMBL
Match: A0A5A7U3D7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43G00480 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.1e-37
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MRKERWYRQGNHDDERLIYEDTTVAGALQTMNEERNDDGWSFANRDKRYGEEGSGQLGLG 60
           MRKERWYRQGNHDDERLIYEDTTVAGALQTMNEERNDDGWSFANRDKRYGEEGSGQLGLG
Sbjct: 82  MRKERWYRQGNHDDERLIYEDTTVAGALQTMNEERNDDGWSFANRDKRYGEEGSGQLGLG 141

Query: 61  GNDGSEATTLSGSQGEEEDED 82
           GNDGSEATTLSGSQGEEEDED
Sbjct: 142 GNDGSEATTLSGSQGEEEDED 162

[Close]

BLAST of IVF0022581 vs. NCBI nr
Match: KAA0048746.1 (uncharacterized protein E6C27_scaffold43G00480 [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (410), Expect = 1.01e-48
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MRKERWYRQGNHDDERLIYEDTTVAGALQTMNEERNDDGWSFANRDKRYGEEGSGQLGLG 60
           MRKERWYRQGNHDDERLIYEDTTVAGALQTMNEERNDDGWSFANRDKRYGEEGSGQLGLG
Sbjct: 82  MRKERWYRQGNHDDERLIYEDTTVAGALQTMNEERNDDGWSFANRDKRYGEEGSGQLGLG 141

Query: 61  GNDGSEATTLSGSQGEEEDED 81
           GNDGSEATTLSGSQGEEEDED
Sbjct: 142 GNDGSEATTLSGSQGEEEDED 162

[Close]

BLAST of IVF0022581 vs. NCBI nr
Match: TYK31589.1 (uncharacterized protein E5676_scaffold172G00900 [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (410), Expect = 2.69e-48
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MRKERWYRQGNHDDERLIYEDTTVAGALQTMNEERNDDGWSFANRDKRYGEEGSGQLGLG 60
           MRKERWYRQGNHDDERLIYEDTTVAGALQTMNEERNDDGWSFANRDKRYGEEGSGQLGLG
Sbjct: 114 MRKERWYRQGNHDDERLIYEDTTVAGALQTMNEERNDDGWSFANRDKRYGEEGSGQLGLG 173

Query: 61  GNDGSEATTLSGSQGEEEDED 81
           GNDGSEATTLSGSQGEEEDED
Sbjct: 174 GNDGSEATTLSGSQGEEEDED 194

The following BLAST results are available for this feature:

BLAST of IVF0022581 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0022581 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E6W2	3.1e-37	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U3D7	3.1e-37	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of IVF0022581 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048746.1	1.01e-48	100.00	uncharacterized protein E6C27_scaffold43G00480 [Cucumis melo var. makuwa]	[more]
TYK31589.1	2.69e-48	100.00	uncharacterized protein E5676_scaffold172G00900 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0022581 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0022581.1	IVF0022581.1	mRNA