IVF0022538 (gene) Melon (IVF77) v1

Overview


Name	IVF0022538
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	flowering time control protein FCA
Location	chr04: 14093777 .. 14100640 (+)
RNA-Seq Expression	IVF0022538
Synteny	IVF0022538

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGAGGGGTTCGGAAACGGCGGTTTGAGGCCGAATTGTGGGAATCCAAATGCCAATTTAGGGCGTAAAAGGCCTAGAAACTATTCCAACAGAACTGTTCCTGGAGGTATTTGACTTTTTATTAATCATGTAGTGTTGAACATAGCTATATTGTTGGTTTATAGCACTAATATATTTTGACACTAATATATCTTGTTGCCTTGCTTACAGTTCCCTGCTGGATCATGAACTGAACTTAATGATTTCTCTTTTAGACTGTTAAATAGATAATTTGACTCTAATTTTTCTTTTTATTGGGCATTTTCAAATTTTGAAGTTTGTCGTTAACACTACATTTGTTAATACATTCCTTTTCCTTTGATTATCCCTCGGTTCTGTATGATTGCGTTTGGATTTTATTATTTTTTTTATTTTCTTTTTTGAACTTTTCTTCAAGTATTCCAAGATTTTTATGCAATAAAGTTGAGATCTACTTTAAGAACATTAAATTGCTCTTTTAACTGCCTAACAGTTAACACGAGGCACTGGGAATTAGGGGAACTTTTACTACAAAAACTATCTGATGTTGCTTTCCTTTGGAGCAATTTGTTCATAATGGATGTCATTGAGATGGTTTTTTTGTTTATTTATTCTCTTCCAGATCATGCTGAGGCTAGTGGTCATGTGAAATTGTATGTTGCACAAGTTCCCCGAACAGGAACTGAAGAAGCTGTAAGTTTTAATTTTCATGCTTTGCCAACTCATATAACCTTGTAGGCGAAAGAGTTCTTTGGGAAGGAAGATTCATGGTCTTATATCGTCTCACTAATCTTGGTTCCATCTTTTAGTTATTTTTGGGATTTTCTTAATTTTTAGGCTTATATACTTTTTTTTCCCTTAAACAGAAACAAAACTTTTCAGTGATGAAACGGAAAGAGTTTATCTCAGAGATATAATGAGACATAATAAGCATAGGAAACTAAAAAACCAAGGATCAACCAGTGCACCTAGATATCTTGACTAGGTTGACACACCCACAGCACCCTCATCATATACCAATACAAAATACAACTATTGAAGAATTACATAATGTCATTACGACATGATTACACAGGAGAAATAAAAACATTCAAGTTAAGACAAATATACCAAGAAGAAGATAGCAGACGAGCTGAACCAAAATCAAAACAATCCATGGACTTGTCATGGAAAACTCTCTAATTGCATTCAAACAAAATTTGTAGGCTTATGAACAATACTTTATGATCATTGTCTTGCATTTGGGAGTCTTGGGGAGGCTATTATAACTAAGTAACAATGGTTGTACCATTTCACAAATTTGAATGGAATGTTTCTGTGAACTTCAAATCATTCAAAAGTTCCAACAGACAAAAAACTTAAATACTTAAACTTGACTTTTTTTTTTCCGTTGATAACCTTCAAAATCAAGATTCAATAAAGAAGAGGGTGTTTTATACTTGTTTTTGTTCTTAGTATTTTGTTTCTTACTTCAAAAACCTTCAAAATCAAACTTCTAAATGTTTGCTAATTACGTTACTTTATTCATTTTATTTCTCCCTCATATTAAAGTCATCTACAATTCTTTAAGTCATAATTTAACATTATTGACGGTTTAAATCTTTGGTGTCAGATTCGTCCTTTGTTTGAAGTACATGGAGATATTGTTGAGATTGTAATATTAAGGGATAAGATAACTGGCCAACAACAAGGTATTTTCTTCATTTTAAGTTTAATTCCATTTTATTGTTCTGCTGTTTGGGTTGACCAGAGTATCATCAGCTCTCTTTTGATCTTCATACATTTGGAGTACGGCTGCAAAATTGACATGTTCTTGTTTATTTAAGATTTGATGACAGTGCCTTGTCTTTTCGAGAACATCCCCTTGTCAAAGAAAATTCTATTTTATTGAATCACTGTCATCTTATTCCTTCTAAATTTCTTAATAACACTTGTCAGTTCTTATATATGATCAAGACCTTCTGTGGCGTTTTTCTTTAAAATAAGTTTTTATTGCACTGTTGTTTCAAGTTGATTTTATCATGCTTTGTTTACAGATGTCATCTTTAATTGAAGTTTGTTGACTGAGATGTCATTTTTAGATGACAGCTTTGATATGAATAGTGTTTATCGTTAAGATCCAAATGGATTATGGTTAATGTCTGTCTTTATGCTGTCATTCGTAAGAATAATATTAAAGCAGATTTATGATTTTCTTTTCAGGCAGTTGTTTTGTGAAATACTCTTCCTCCGTTGAAGCAGACAGGGCAATCAGAGCTTTGGACAACCAGTATACTTTTCCTGGAGTGAGTAATGAAGCACTGTTGTTCTTATTTTGGAAGTTTGTTTCCTATCAAAATAAATAAATAAATGACTAAAAAGTCTCTTTTTACTGTTTCTGATAATATTTAGGTAACTCAATTTATGTCATAATAACTTTTCTAACTATATTTTCTTTAAAAAAGGCTTTTCTTACTAGTCTTTAATATCAGGAACTGACTCCCATCAATGTAAAATATGCTGACAGTGAAAAGGACCGCCTGGGTGAGTTTCTGGTATTCCTGACTTCCTGTTGCATCGCTTTGATGTATTTTTCCTTTATGCATTCTGTATCGTTTGTATCTTAACAAGGTTATTTTAGTGCAGTAGTTGAGCATTTTTTCTACTGCGTTCTTGCTTTATATGTTTTGAGCTTTGCATGACCAAGCTGCACATTATTCTGATTGTTTCCCCTAAGAGGGAACCCCTTAATCAATTATCTCATGACTTTGCCCCTTTCAAATTTTTATTTTTATGTTTTATGTAGGAGTACTTGAAAATTGTATGTTGGTAGCTTGAATAAAAATACTACAAAAAGGGAAATTGAGGAGGTAAGTAAGCAATATTCTTCACACACACAACATTGAGTTATTTTTTAAAGAAACATTGCACTTTTGGTTCTGAGATTTTAATCTGAATACTTGAACAATTTTAACTTTTGAGGTTTTGGAAAATTACTGAAAGAAACCCCACCATCAACTTTTGTTAACTACATTGGTGCAAAGATGACTTTTAAATTAAGATATATTGTTTTTAAGGGAAGTGTGAAAATATTTAATTAAGTTCGTATTCTCTTTTCTGGTTAAATGGTCGTTAAGTTACCCCAAGATTAGTAGTTTACCAAAATTTGACTAACCAAGTTAAACATTCAGTATATTCTATTAATTTAAACAAATAATTGAACACAAGTAAATAATAAAAATCCACCCAATTATACACAGATTAATAGAAAATCATCCATGTTCTTTGTCTTGAACTTTTCCCCATGGCTGCATAAGTCATAAGATTAAATGTTTTTGAGTTCATACGTTCAAATCATGGTGGTTGCCCACCTAGGATAATAAATAATTGGGGCTTTTCATGATCTCCACTCATGGTTCTTCAGAATTGGTGTTGCCTCTAGGTGTTCACGAACTTGTTCAGATCTCCTCATTATCCTCCCTCAGTATGGATTTGATTTATGCTTTGGCTATTGTGTCTTGTGTGACCTTTAAGATGTCGTGCATGTTACTGTAAGGTGCAAAAAGATTTTGTAAGACTAGGGAAAACAATTGATATATGTTATTTTGTCCAGTGCTATAAAGGTTATGGATGATAGGTTGAGGAAATCACCAAATAAATGAGGCTAGAGAAGCAGTTCTTATTTTATTTTACTGTGTTATTTATTTATCTTTGCCATTTATTCAATCAAGAGTTTTTTTTGAACATTTCATCTGTCAGGTATTCTCACCTTATGGTTTCGTTGAGGATATTTACATCATACGAGATGACCTGAAGCAAAGCCGAGGTGTGAAATTTTCTTCTATTGAAATTTATTGAGGAAGATTTTAAATAGCTTATTGTACTTATCGTGGAAGTTTTTCTCAAAAGTTATTAATTTTCAATGTACAGTATCAAACCTTGTCAAGCCTATCCGTAATTTCTTTATAACACAAACTTGTACAGGATGAAATTGCGAACAGATCATTGAGAGTAAAATCTTTATTCTGATGGATAAAGTACTTATAGAATCATATTGTGTCAGAAAATCAGTTGAAATTGAAACATTATTTCTCCCATGTTTTACTGATCAGCCATAGAGGCTTTTAATTTCTTCTCTCGATTGCAAAGTTAACTTTAACTTTGGGCCAGACTCTCAATTTATGTTTCTGATTTTGGTGCTCATGCTCTTATCAAGGATCTGCCTTTGTAAAGTATGCTCGAAGAGATATGGCATTGGCAGCAATCAAAGCATTGAATGGCAATTTTACGATGAGAGTAGGGCTTGTCTATATAATCCCATATATACTCTGGTGTATGTGTGAATTACTCTTCTAAGCTTAACATTGGTTTCATGTTTCTTTCTACGTCACTAGGGTTGTGATCAGCCATTGATTGTTCGTCTGGCAGACCCTAAGAAACCCAGGATTGGTGAACAAAGGTTCAGCCTAACACATTACTATTTCCTTGTATCTATTATGTATATGAAGTGTATTCTCTCGTTACTGATTGCTCATCTGTCGTGTGGTAACCTTGAATCATGATAATAGCTGATGTAACTAGTTAATGTACCTTAAGCTCTTGCTTCTTGCATCACCAAATAACTATCTCTAAATCTGTAGAGCACTACGAAGCCAAGGGAGTGTGATGTATATAATTATATATATCCTGTGTGAGAGAGAGAGAGAGTGCAAGGAAATGTAGGAGCCAACTCCCCTAATTCTTGTATGCGCTCCTCCCTGATGTAAGAAGAATAGAGAATTGATTTCCTTTTTACTCCCACATGTAATAGAACTCTATAAAACAGGAGTGTTCCTCTCTTCTACGAAACAATCATTATGACTTCGATAAAAGAGGCACAAGATTAATTCTTGGAAGATTATTGCTTGAGAATACTTAGGCTACATCATCCCCATGTTCACTTCCTCCCAACTTGAAGGTTTGTTTCTTTTAAGAAAATGGACAGATGGAAACCGAAATGAGTAGTTCTATTAAATGACTTGATGCTATGCTCTAGCCTACTACCGATGATATCCCCTGTTTCCCTATTTGAAAGTGACGAAACCTCTAGATGGACAAATATTGTTGAATTTGAACTACTGTGATGTAAGCTAACAATAATTAGTTTTTATATTGCAGGCCATTATGTATTTATATTTCATGAATGTGTCGGACAAACATTTTGAACATACATACATTTGCATGTAGCAGATATAGCATAGGTTCTTTTATGCTTATTTTCTTATTGTTGTGTCAATGTTCAATTGTTAAATATATATATTTCTCGCAGAAGCAGCAACGTATCAGGCAGCCCGAGATTTGGTCATCATCCTCAACCGTTTAGGTAATACCGTAATTGTTTCTTTTTATCTAACTTATAACATAAACTGTTTTCTTAATGGTTCAACCTTTCTAGACCTGAGCCTCCTGTTGGTCCTGCTGGAGGGTGTTTTCCCAATAATTCATACCGGGACAACAAAATTCTCCAAGTTTAGGACCACCTAGGAATGCTTCCCAAGCGGCATCCCATACCCCTTTTGCTCCTAATAGCATACAGAAACCATCCCCTCAAATACAGGAACCGCCATCATCTTTTGCTCAAATGTCATCACAACCAATGAGGTCAACACAGCAAGTTTGTCAGCCTCCTATTCAGACTGATTTTTCTAAGATGCAGAATCAGGTGCCTTGTCAACAGCCCCGGCAAGATTCACATCAGCAGCAAAATTTACAGGTTCGTGAGAATATGGTGTGAAGATGATTTGAATTATAAAGTTCTTGTAATAGCTGTCAAATTACATTAAAGTAAAAGACCTTGTCATGATTGGCATCCTAATTCTATTCCGGGAGCAGTGAAACAAATGCTGAAACTTTTCTTTGCGGATAATTACTAAAGAGGTCGTTTATTGCCATATTGTCATTAACTTGTGTGTGTATTTTCTTCTATGTTTTTTGTGCAGCCTCCTGCTGTACGTGGTGTTCAGACCTTTAGTTGTACTTCCGACTCACCTATGGGGCGTCCAAGCTCTCGGGTAGAAGTTACTTTGGAGTGTGATTGGAGTGAACACACCTGCCCAGACGGTTTCAAATACTATTATAACTGTGTCACCTATGAAAGCTTGGTAAGCTTTATGTCCTCATCCATCCGTCTTGCAACAGTTGTTTCCAATTTGTGTGGTGCAATTTATGATAGTACCTTTGAAAATTGGTTCTTAGTGGGAGAAGCCAGAAGAGTTTGCCTTGTTTGAGAAACAACTAAAGCAGGAAAAGCTTCAAAAACCAAACCATCAGATTCATTCTTCATTACCGGGTGTCTCTTCTCAAGAAGTGCCGCCTCAGCCAAATCTTTTTAGTCAAAAACTTGACGCCCAATATTCCTCAGCTGTACGAGTTAGTATTCATTCATGCACATACAGATTCGTATCTCTTCTCTTGTATTCACTATATCTTTTCCAGTTATATTTTTGTTAAGCCATGCAATTATATTAGATTGATGCTAGTGGTACATAAAATCTCCACTTGTCAACCGTAAATAAACTATATCTAAAAGTGATTTTGAAATGGCTAAAATGACATTAATCTTCAAAATCAATTCTGATGGTATGGAAACTGCGATTAAAAGTGTGAAATCAAACAATAAATTGATTTGAAAGGATTTAAAACTTGTTGAAATGATTTTAATTATTTCAAAAAAACTCTCGTACAAGCTAAATAATACAGCTTGAGAATTCATTTTCAGGATTTCAGTTTTCTCTAATTCTTTAATATTTTCAAATTCTGCAGGAGTTGGATTGTATGCGACTTCAATCAAAAGCAAGTCCTGTTGTTAGTCCAGCGTGTGTTTAA

mRNA sequence

ATGACTGAGGGGTTCGGAAACGGCGGTTTGAGGCCGAATTGTGGGAATCCAAATGCCAATTTAGGGCGTAAAAGGCCTAGAAACTATTCCAACAGAACTGTTCCTGGAGATCATGCTGAGGCTAGTGGTCATGTGAAATTGTATGTTGCACAAGTTCCCCGAACAGGAACTGAAGAAGCTATTCGTCCTTTGTTTGAAGTACATGGAGATATTGTTGAGATTGTAATATTAAGGGATAAGATAACTGGCCAACAACAAGGCAGTTGTTTTGTGAAATACTCTTCCTCCGTTGAAGCAGACAGGGCAATCAGAGCTTTGGACAACCAGTATACTTTTCCTGGAGAACTGACTCCCATCAATGTAAAATATGCTGACAGTGAAAAGGACCGCCTGGGTGACTTGAATAAAAATACTACAAAAAGGGAAATTGAGGAGGTATTCTCACCTTATGGTTTCGTTGAGGATATTTACATCATACGAGATGACCTGAAGCAAAGCCGAGGATCTGCCTTTGTAAAGTATGCTCGAAGAGATATGGCATTGGCAGCAATCAAAGCATTGAATGGCAATTTTACGATGAGAGGTTGTGATCAGCCATTGATTGTTCGTCTGGCAGACCCTAAGAAACCCAGGATTGGTGAACAAAGAAGCAGCAACGTATCAGGCAGCCCGAGATTTGGTCATCATCCTCAACCGTTTAGTTTAGGACCACCTAGGAATGCTTCCCAAGCGGCATCCCATACCCCTTTTGCTCCTAATAGCATACAGAAACCATCCCCTCAAATACAGGAACCGCCATCATCTTTTGCTCAAATGTCATCACAACCAATGAGGTCAACACAGCAAGTTTGTCAGCCTCCTATTCAGACTGATTTTTCTAAGATGCAGAATCAGGTGCCTTGTCAACAGCCCCGGCAAGATTCACATCAGCAGCAAAATTTACAGCCTCCTGCTGTACGTGGTGTTCAGACCTTTAGTTGTACTTCCGACTCACCTATGGGGCGTCCAAGCTCTCGGGTAGAAGTTACTTTGGAGTGTGATTGGAGTGAACACACCTGCCCAGACGGTTTCAAATACTATTATAACTGTGTCACCTATGAAAGCTTGTGGGAGAAGCCAGAAGAGTTTGCCTTGTTTGAGAAACAACTAAAGCAGGAAAAGCTTCAAAAACCAAACCATCAGATTCATTCTTCATTACCGGGTGTCTCTTCTCAAGAAGTGCCGCCTCAGCCAAATCTTTTTAGTCAAAAACTTGACGCCCAATATTCCTCAGCTGTACGAGAGTTGGATTGTATGCGACTTCAATCAAAAGCAAGTCCTGTTGTTAGTCCAGCGTGTGTTTAA

Coding sequence (CDS)

ATGACTGAGGGGTTCGGAAACGGCGGTTTGAGGCCGAATTGTGGGAATCCAAATGCCAATTTAGGGCGTAAAAGGCCTAGAAACTATTCCAACAGAACTGTTCCTGGAGATCATGCTGAGGCTAGTGGTCATGTGAAATTGTATGTTGCACAAGTTCCCCGAACAGGAACTGAAGAAGCTATTCGTCCTTTGTTTGAAGTACATGGAGATATTGTTGAGATTGTAATATTAAGGGATAAGATAACTGGCCAACAACAAGGCAGTTGTTTTGTGAAATACTCTTCCTCCGTTGAAGCAGACAGGGCAATCAGAGCTTTGGACAACCAGTATACTTTTCCTGGAGAACTGACTCCCATCAATGTAAAATATGCTGACAGTGAAAAGGACCGCCTGGGTGACTTGAATAAAAATACTACAAAAAGGGAAATTGAGGAGGTATTCTCACCTTATGGTTTCGTTGAGGATATTTACATCATACGAGATGACCTGAAGCAAAGCCGAGGATCTGCCTTTGTAAAGTATGCTCGAAGAGATATGGCATTGGCAGCAATCAAAGCATTGAATGGCAATTTTACGATGAGAGGTTGTGATCAGCCATTGATTGTTCGTCTGGCAGACCCTAAGAAACCCAGGATTGGTGAACAAAGAAGCAGCAACGTATCAGGCAGCCCGAGATTTGGTCATCATCCTCAACCGTTTAGTTTAGGACCACCTAGGAATGCTTCCCAAGCGGCATCCCATACCCCTTTTGCTCCTAATAGCATACAGAAACCATCCCCTCAAATACAGGAACCGCCATCATCTTTTGCTCAAATGTCATCACAACCAATGAGGTCAACACAGCAAGTTTGTCAGCCTCCTATTCAGACTGATTTTTCTAAGATGCAGAATCAGGTGCCTTGTCAACAGCCCCGGCAAGATTCACATCAGCAGCAAAATTTACAGCCTCCTGCTGTACGTGGTGTTCAGACCTTTAGTTGTACTTCCGACTCACCTATGGGGCGTCCAAGCTCTCGGGTAGAAGTTACTTTGGAGTGTGATTGGAGTGAACACACCTGCCCAGACGGTTTCAAATACTATTATAACTGTGTCACCTATGAAAGCTTGTGGGAGAAGCCAGAAGAGTTTGCCTTGTTTGAGAAACAACTAAAGCAGGAAAAGCTTCAAAAACCAAACCATCAGATTCATTCTTCATTACCGGGTGTCTCTTCTCAAGAAGTGCCGCCTCAGCCAAATCTTTTTAGTCAAAAACTTGACGCCCAATATTCCTCAGCTGTACGAGAGTTGGATTGTATGCGACTTCAATCAAAAGCAAGTCCTGTTGTTAGTCCAGCGTGTGTTTAA

Protein sequence

MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPINVKYADSEKDRLGDLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFVKYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQPFSLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPSSFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSCTSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEKLQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV

Homology

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BLAST of IVF0022538 vs. ExPASy Swiss-Prot
Match: B8BCZ8 (Flowering time control protein FCA OS=Oryza sativa subsp. indica OX=39946 GN=FCA PE=3 SV=2)

HSP 1 Score: 253.1 bits (645), Expect = 6.0e-66
Identity = 199/597 (33.33%), Postives = 258/597 (43.22%), Query Frame = 0


Query: 6   GNGGLRPNCGNPNANLGR-KRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPL 65
           G GG R   G      G   R R  S R    DH   + +VKL++  VPRT TE+ +RPL
Sbjct: 82  GGGGYRSGGGGEYGEPGSGPRHRYGSGRGDHSDHDNRNNYVKLFIGSVPRTATEDDVRPL 141

Query: 66  FEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPINVKYA 125
           FE HGD+VE+ +++D+ TG+QQG CFVKY++S EA+RAIRAL NQYT PG + PI V+YA
Sbjct: 142 FEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRALHNQYTLPGAMGPIQVRYA 201

Query: 126 DSEKDRLG---------DLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFVKYA 185
           D E++R G          LNK  T +EIEE+F+PYG VED+YI++D ++QSRG  FVK++
Sbjct: 202 DGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRGCGFVKFS 261

Query: 186 RRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRF--------- 245
            R+ ALAA+ AL+GN+ MRGC+QPLI+R ADPK+PR GE R     G P F         
Sbjct: 262 SREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPRPGESRGGPAFGGPGFSPRSDAALV 321

Query: 246 -----------GHHPQPFSLGP--PRNA----SQAASHTPFAPNS--------------- 305
                      G H  P S  P  PR+A    +   S  P AP                 
Sbjct: 322 IRPTANLDEPRGRHMPPDSWHPSSPRSAPHQFNNFGSDNPMAPKGSTVTSTTDTATFRPQ 381

Query: 306 ------------------------------------------------------------ 365
                                                                       
Sbjct: 382 MFSGNGSLSSQTAVPSSSHMGMNPPPMAQGHHLGGQQIPPLQKLPGLPQNFPVQLQNNQQ 441

Query: 366 ---IQKPSPQI---QEP----PSSFAQ--MSSQ--------------------------- 411
              +Q P+ QI   Q P    P SF Q  +S Q                           
Sbjct: 442 GQPLQGPAQQIGQLQVPQSMGPGSFGQNMLSGQLPVSQPLMQQNASVGAVQAPSAVSNSM 501

[Close]

BLAST of IVF0022538 vs. ExPASy Swiss-Prot
Match: Q6K271 (Flowering time control protein FCA OS=Oryza sativa subsp. japonica OX=39947 GN=FCA PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 6.0e-66
Identity = 199/597 (33.33%), Postives = 258/597 (43.22%), Query Frame = 0


Query: 6   GNGGLRPNCGNPNANLGR-KRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPL 65
           G GG R   G      G   R R  S R    DH   + +VKL++  VPRT TE+ +RPL
Sbjct: 82  GGGGYRSGGGGEYGEPGSGPRHRYGSGRGDHSDHDNRNNYVKLFIGSVPRTATEDDVRPL 141

Query: 66  FEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPINVKYA 125
           FE HGD+VE+ +++D+ TG+QQG CFVKY++S EA+RAIRAL NQYT PG + PI V+YA
Sbjct: 142 FEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRALHNQYTLPGAMGPIQVRYA 201

Query: 126 DSEKDRLG---------DLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFVKYA 185
           D E++R G          LNK  T +EIEE+F+PYG VED+YI++D ++QSRG  FVK++
Sbjct: 202 DGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRGCGFVKFS 261

Query: 186 RRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRF--------- 245
            R+ ALAA+ AL+GN+ MRGC+QPLI+R ADPK+PR GE R     G P F         
Sbjct: 262 SREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPRPGESRGGPAFGGPGFSPRSDAALV 321

Query: 246 -----------GHHPQPFSLGP--PRNA----SQAASHTPFAPNS--------------- 305
                      G H  P S  P  PR+A    +   S  P AP                 
Sbjct: 322 IRPTANLDEPRGRHMPPDSWHPSSPRSAPHQFNNFGSDNPMAPKGSTVTSTTDTATFRPQ 381

Query: 306 ------------------------------------------------------------ 365
                                                                       
Sbjct: 382 MFSGNGSLSSQTAVPSSSHMGMNPPPMAQGHHLGGQQIPPLQKLPGLPQNFPVQLQNNQL 441

Query: 366 ---IQKPSPQI---QEP----PSSFAQ--MSSQ--------------------------- 411
              +Q P+ QI   Q P    P SF Q  +S Q                           
Sbjct: 442 GQPLQGPAQQIGQLQVPQSMGPGSFGQNRLSGQLPVSQPLMQQNASVSAVQVPSAVSNSM 501

[Close]

BLAST of IVF0022538 vs. ExPASy Swiss-Prot
Match: O04425 (Flowering time control protein FCA OS=Arabidopsis thaliana OX=3702 GN=FCA PE=1 SV=3)

HSP 1 Score: 246.9 bits (629), Expect = 4.3e-64
Identity = 187/571 (32.75%), Postives = 257/571 (45.01%), Query Frame = 0


Query: 37  DHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSS 96
           D ++ S  VKL+V  VPRT TEE IRP FE HG+++E+ +++DK TGQQQG CFVKY++S
Sbjct: 112 DVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATS 171

Query: 97  VEADRAIRALDNQYTFPGELTPINVKYADSEKDRL---------GDLNKNTTKREIEEVF 156
            +ADRAIRAL NQ T PG   P+ V+YAD E++R+         G LNK  T++E+EE+F
Sbjct: 172 KDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIF 231

Query: 157 SPYGFVEDIYIIRDDLKQSRGSAFVKYARRDMALAAIKALNGNFTMRGCDQPLIVRLADP 216
             +G VED+Y++RD+ +QSRG  FVKY+ ++ A+AAI  LNG +TMRGC+QPLIVR A+P
Sbjct: 232 LQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEP 291

Query: 217 KKPRIGEQRSS----NVSGSPRF-GHHPQPFS----------------------LGPPRN 276
           K+P+ GE R       +   PRF    P+P S                      +GPP N
Sbjct: 292 KRPKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSGDVSHTNPWRPATSRNVGPPSN 351

Query: 277 ------------------------------------------------------------ 336
                                                                       
Sbjct: 352 TGIRGAGSDFSPKPGQATLPSNQGGPLGGYGVPPLNPLPVPGVSSSATLQQQNRAAGQHI 411

Query: 337 ------------------------ASQAASHTPFA------------------------- 396
                                    +QA    P+A                         
Sbjct: 412 TPLKKPLHSPQGLPLPLRPQTNFPGAQAPLQNPYAYSSQLPTSQLPPQQNISRATAPQTP 471

Query: 397 ------------------PNSIQKPSPQIQEPPSSFAQMSSQPMRSTQQVCQPPIQTDFS 427
                             P S Q+P  ++Q PPS  AQ+ SQ  +S Q   Q   Q   S
Sbjct: 472 LNINLRPTTVSSATVQFPPRSQQQPLQKMQHPPSELAQLLSQQTQSLQATFQSS-QQAIS 531

[Close]

BLAST of IVF0022538 vs. ExPASy Swiss-Prot
Match: Q8GZ26 (RNA-binding protein BRN2 OS=Arabidopsis thaliana OX=3702 GN=BRN2 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.8e-31
Identity = 70/178 (39.33%), Postives = 108/178 (60.67%), Query Frame = 0


Query: 40  EASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEA 99
           E    VKL+V QVP+  TE  +  LF     + E+ I+++K T   +G CF+   +  +A
Sbjct: 7   ENEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDA 66

Query: 100 DRAIRALDNQYTFPGELTPINVKYADSEKDRL------GDLNKNTTKREIEEVFSPYGFV 159
           D+ I +  N+ T PG  +P+ VKYAD E +RL      G L KN ++ E++ +FS YG +
Sbjct: 67  DKVINSFHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSETEVQSLFSEYGTI 126

Query: 160 EDIYIIRDDLKQSRGSAFVKYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPR 212
           +D+ I+R  L+ S+G  F+KY  ++ A+AA++ALNG   M G + PLIV+ AD +K R
Sbjct: 127 KDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWADTEKER 184

[Close]

BLAST of IVF0022538 vs. ExPASy Swiss-Prot
Match: Q9IBD0 (CUGBP Elav-like family member 1 OS=Danio rerio OX=7955 GN=celf1 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 4.5e-29
Identity = 78/210 (37.14%), Postives = 119/210 (56.67%), Query Frame = 0


Query: 45  VKLYVAQVPRTGTEEAIRPLFEVHGDIVEIVILRDKITG--QQQGSCFVKYSSSVEADRA 104
           +K++V Q+PRT +E+ +R LFE +G + EI +LRD+     Q +G CFV Y +   A  A
Sbjct: 16  IKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSALEA 75

Query: 105 IRALDNQYTFPGELTPINVKYADSEKDR--------LGDLNKNTTKREIEEVFSPYGFVE 164
             AL N    PG   PI +K ADSEK+         +G ++K   + +I  +FSPYG +E
Sbjct: 76  QNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQIE 135

Query: 165 DIYIIRDDLKQSRGSAFVKYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKK----P 224
           +  I+R     SRG AFV +  R MA +AIK+++ + TM GC  P++V+ AD +K     
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQK 195

Query: 225 RIG---EQRSSNVSGSPRFGHHPQPFSLGP 238
           RI    +Q+   ++ +  +G+     SLGP
Sbjct: 196 RIAQQLQQQMQQLNAASMWGNLTGLNSLGP 225

[Close]

BLAST of IVF0022538 vs. ExPASy TrEMBL
Match: A0A5A7T550 (Flowering time control protein FCA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00580 PE=4 SV=1)

HSP 1 Score: 874.8 bits (2259), Expect = 1.6e-250
Identity = 446/480 (92.92%), Postives = 446/480 (92.92%), Query Frame = 0


Query: 1   MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60
           MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA
Sbjct: 1   MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60

Query: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN 120
           IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN
Sbjct: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN 120

Query: 121 VKYADSEKDRL--------GDLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV 180
           VKYADSEKDRL        G LNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV
Sbjct: 121 VKYADSEKDRLGVLEKLYVGSLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV 180

Query: 181 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP 240
           KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP
Sbjct: 181 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP 240

Query: 241 F-------------------------SLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS 300
           F                         SLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS
Sbjct: 241 FRPEPPVGPAGGCFPNNSYPGQQNSPSLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS 300

Query: 301 SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC 360
           SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC
Sbjct: 301 SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC 360

Query: 361 TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK 420
           TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK
Sbjct: 361 TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK 420

Query: 421 LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV 448
           LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV
Sbjct: 421 LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV 480

[Close]

BLAST of IVF0022538 vs. ExPASy TrEMBL
Match: A0A1S3BIF0 (flowering time control protein FCA OS=Cucumis melo OX=3656 GN=LOC103489911 PE=4 SV=1)

HSP 1 Score: 874.8 bits (2259), Expect = 1.6e-250
Identity = 446/480 (92.92%), Postives = 446/480 (92.92%), Query Frame = 0


Query: 1   MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60
           MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA
Sbjct: 246 MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 305

Query: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN 120
           IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN
Sbjct: 306 IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN 365

Query: 121 VKYADSEKDRL--------GDLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV 180
           VKYADSEKDRL        G LNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV
Sbjct: 366 VKYADSEKDRLGVLEKLYVGSLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV 425

Query: 181 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP 240
           KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP
Sbjct: 426 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP 485

Query: 241 F-------------------------SLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS 300
           F                         SLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS
Sbjct: 486 FRPEPPVGPAGGCFPNNSYPGQQNSPSLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS 545

Query: 301 SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC 360
           SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC
Sbjct: 546 SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC 605

Query: 361 TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK 420
           TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK
Sbjct: 606 TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK 665

Query: 421 LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV 448
           LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV
Sbjct: 666 LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV 725

[Close]

BLAST of IVF0022538 vs. ExPASy TrEMBL
Match: A0A0A0LBT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G536140 PE=4 SV=1)

HSP 1 Score: 815.1 bits (2104), Expect = 1.5e-232
Identity = 421/480 (87.71%), Postives = 430/480 (89.58%), Query Frame = 0


Query: 1   MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60
           MTEGFGNGGLRPNCGNPN  LGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA
Sbjct: 1   MTEGFGNGGLRPNCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60

Query: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN 120
           IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYS+SVEADRAIRALDNQYTFPGELTPIN
Sbjct: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPIN 120

Query: 121 VKYADSEKDRL--------GDLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV 180
           VKYADSEKDRL        G LNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV
Sbjct: 121 VKYADSEKDRLGVLEKLYVGCLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV 180

Query: 181 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP 240
           KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRS+NVSGSPRFGHHPQP
Sbjct: 181 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSTNVSGSPRFGHHPQP 240

Query: 241 F-------------------------SLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS 300
           F                         SLGPPRNASQ ASHTPFAPNS+QKPSPQ QEP S
Sbjct: 241 FRPEPPVGPAGGCFPNNSYPGQQNSTSLGPPRNASQVASHTPFAPNSMQKPSPQTQEPSS 300

Query: 301 SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC 360
           SFAQMSSQPMRSTQQV QPP QTDFSKMQNQV  QQPRQDSHQQQNLQPP+ RGVQTFS 
Sbjct: 301 SFAQMSSQPMRSTQQVFQPPTQTDFSKMQNQVLGQQPRQDSHQQQNLQPPSARGVQTFSG 360

Query: 361 TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK 420
           T +SPMGRPSS VEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFE+QLK+EK
Sbjct: 361 TPNSPMGRPSSWVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEQQLKEEK 420

Query: 421 LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV 448
           LQKPNHQ+HSSL GVSSQEV PQPNL SQKL+AQYSSAVRELDCMRLQSKASPVVSPACV
Sbjct: 421 LQKPNHQLHSSLSGVSSQEVLPQPNLLSQKLEAQYSSAVRELDCMRLQSKASPVVSPACV 480

[Close]

BLAST of IVF0022538 vs. ExPASy TrEMBL
Match: A0A6J1DSB0 (CUGBP Elav-like family member 4 OS=Momordica charantia OX=3673 GN=LOC111023844 PE=4 SV=1)

HSP 1 Score: 704.5 bits (1817), Expect = 2.8e-199
Identity = 369/485 (76.08%), Postives = 402/485 (82.89%), Query Frame = 0


Query: 3   EGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIR 62
           EGFGNGGLRPNCGN NANLGRKRPRNYSNRTVP DHAEA   VKLYVAQVPRTGTEEAIR
Sbjct: 203 EGFGNGGLRPNCGNQNANLGRKRPRNYSNRTVPSDHAEA---VKLYVAQVPRTGTEEAIR 262

Query: 63  PLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPINVK 122
           PLFEVHGDIVEIVILRDKITGQQQGSCFVKY++S+EADRAI ALDNQ+TFPGE+ PINVK
Sbjct: 263 PLFEVHGDIVEIVILRDKITGQQQGSCFVKYATSIEADRAIGALDNQFTFPGEMAPINVK 322

Query: 123 YADSEKDRL--------GDLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFVKY 182
           YAD E++RL        G LNKNTTKREIEEVFSPYGFVEDIYI+RD+LKQSRG AFVKY
Sbjct: 323 YADGERERLGVLEKLYVGSLNKNTTKREIEEVFSPYGFVEDIYIMRDELKQSRGCAFVKY 382

Query: 183 ARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQPF- 242
           ARR+MA+AAIKALNGN+T+RGCDQPLIVRLADPKK R+GEQRS+++SGSP FGHHPQPF 
Sbjct: 383 ARREMAMAAIKALNGNYTIRGCDQPLIVRLADPKKSRVGEQRSNSMSGSPNFGHHPQPFR 442

Query: 243 -------------------------SLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPSS 302
                                    SLGP +NASQ AS+ P APN+IQK  P IQEP SS
Sbjct: 443 PEPPLGAPAGGCFPNNLYPPQQNSASLGPAKNASQVASNAPLAPNTIQKAHPPIQEPSSS 502

Query: 303 FAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPC-QQPRQDSHQQQNLQ-----PPAVRGV 362
           FA + SQPMR+TQQVCQPP Q DFSKMQNQV C QQPR+DS+QQQN Q     PP   G+
Sbjct: 503 FAHIPSQPMRTTQQVCQPPTQPDFSKMQNQVYCQQQPRKDSYQQQNSQVNENTPPTAHGL 562

Query: 363 QTFSCTSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQ 422
           QTFS   +SP+ RP SRVEV+LECDWSEHTCPDGFKYYYNCVT ES WEKPEEFALFE+Q
Sbjct: 563 QTFSGVPNSPLVRPCSRVEVSLECDWSEHTCPDGFKYYYNCVTCESSWEKPEEFALFEQQ 622

Query: 423 LKQEKLQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVV 448
           LKQEKLQK NHQ+HSSLP +SS EV P PN+FSQKL+ Q SSAVRELDCMRLQSKASPVV
Sbjct: 623 LKQEKLQKQNHQLHSSLP-ISSPEVLPHPNVFSQKLEVQSSSAVRELDCMRLQSKASPVV 682

[Close]

BLAST of IVF0022538 vs. ExPASy TrEMBL
Match: A0A6J1GA62 (flowering time control protein FCA OS=Cucurbita moschata OX=3662 GN=LOC111452192 PE=4 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 1.2e-189
Identity = 356/473 (75.26%), Postives = 384/473 (81.18%), Query Frame = 0


Query: 10  LRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHG 69
           +RPN GN NANLGRKRPRN   RTVP DHAEA G  KLYVAQVPRTGTEEAIRPLF+VHG
Sbjct: 1   MRPNYGNQNANLGRKRPRNQPIRTVPADHAEAGGTAKLYVAQVPRTGTEEAIRPLFDVHG 60

Query: 70  DIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPINVKYADSEKD 129
           +I+EIVILRDK+TGQQQGSCFVKY++S+EADRAIRALDNQYTFPGE+TPINVKYAD EK+
Sbjct: 61  EILEIVILRDKLTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGEMTPINVKYADGEKE 120

Query: 130 RL--------GDLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFVKYARRDMAL 189
           RL        G LNKNTTKREIEEVFSPYGFVEDIYI+RD+LKQSRG AFVKYARRDMA+
Sbjct: 121 RLGVLEKLYVGSLNKNTTKREIEEVFSPYGFVEDIYIMRDELKQSRGCAFVKYARRDMAM 180

Query: 190 AAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQPF-------- 249
           AAI+ALNG +TMRGCDQPLIVRLA+PKKPRIGEQR SN+SGSP+FGHHP PF        
Sbjct: 181 AAIEALNGKYTMRGCDQPLIVRLAEPKKPRIGEQR-SNMSGSPKFGHHPHPFRPELPLGP 240

Query: 250 ------------------SLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPSSFAQMSSQ 309
                             SLGPP++ASQ  SH PFAPNSIQKP PQIQEP SSFAQM S+
Sbjct: 241 PAGGCFPNNPYPGQQNSASLGPPKSASQVVSHAPFAPNSIQKPPPQIQEPSSSFAQMPSR 300

Query: 310 PMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSH-QQQNLQPPAVRGVQTFSCTSDSPMG 369
           PMR TQQVCQPP QTDFSKM NQV  QQPRQDSH QQQNLQ P  R VQTF+ T +SPM 
Sbjct: 301 PMRPTQQVCQPPTQTDFSKMPNQVHSQQPRQDSHQQQQNLQGPPARSVQTFTGTPNSPMT 360

Query: 370 RPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEKLQKPNHQ 429
            PSS+VE  LECDWSEHTCPDGFKYYYNCVT ESLWEKPEEFA FE+Q KQEKLQKPNH 
Sbjct: 361 HPSSQVEGPLECDWSEHTCPDGFKYYYNCVTCESLWEKPEEFATFEQQSKQEKLQKPNH- 420

Query: 430 IHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV 448
                 G+SS E  PQPNLF  K + Q S+AVRELDCMRLQSKASPVVSPACV
Sbjct: 421 -----AGLSSPEGLPQPNLF--KPNVQTSAAVRELDCMRLQSKASPVVSPACV 464

[Close]

BLAST of IVF0022538 vs. NCBI nr
Match: KAA0038123.1 (flowering time control protein FCA [Cucumis melo var. makuwa] >TYK20484.1 flowering time control protein FCA [Cucumis melo var. makuwa])

HSP 1 Score: 875 bits (2260), Expect = 0.0
Identity = 446/480 (92.92%), Postives = 446/480 (92.92%), Query Frame = 0


Query: 1   MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60
           MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA
Sbjct: 1   MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60

Query: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN 120
           IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN
Sbjct: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN 120

Query: 121 VKYADSEKDRLG--------DLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV 180
           VKYADSEKDRLG         LNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV
Sbjct: 121 VKYADSEKDRLGVLEKLYVGSLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV 180

Query: 181 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP 240
           KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP
Sbjct: 181 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP 240

Query: 241 F-------------------------SLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS 300
           F                         SLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS
Sbjct: 241 FRPEPPVGPAGGCFPNNSYPGQQNSPSLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS 300

Query: 301 SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC 360
           SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC
Sbjct: 301 SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC 360

Query: 361 TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK 420
           TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK
Sbjct: 361 TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK 420

Query: 421 LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV 447
           LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV
Sbjct: 421 LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV 480

[Close]

BLAST of IVF0022538 vs. NCBI nr
Match: XP_008447475.2 (PREDICTED: flowering time control protein FCA [Cucumis melo])

HSP 1 Score: 875 bits (2260), Expect = 1.06e-315
Identity = 446/480 (92.92%), Postives = 446/480 (92.92%), Query Frame = 0


Query: 1   MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60
           MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA
Sbjct: 246 MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 305

Query: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN 120
           IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN
Sbjct: 306 IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN 365

Query: 121 VKYADSEKDRLG--------DLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV 180
           VKYADSEKDRLG         LNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV
Sbjct: 366 VKYADSEKDRLGVLEKLYVGSLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV 425

Query: 181 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP 240
           KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP
Sbjct: 426 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP 485

Query: 241 F-------------------------SLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS 300
           F                         SLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS
Sbjct: 486 FRPEPPVGPAGGCFPNNSYPGQQNSPSLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS 545

Query: 301 SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC 360
           SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC
Sbjct: 546 SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC 605

Query: 361 TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK 420
           TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK
Sbjct: 606 TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK 665

Query: 421 LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV 447
           LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV
Sbjct: 666 LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV 725

[Close]

BLAST of IVF0022538 vs. NCBI nr
Match: XP_031738780.1 (flowering time control protein FCA isoform X1 [Cucumis sativus] >KGN58132.1 hypothetical protein Csa_017585 [Cucumis sativus])

HSP 1 Score: 815 bits (2105), Expect = 6.29e-296
Identity = 421/480 (87.71%), Postives = 430/480 (89.58%), Query Frame = 0


Query: 1   MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60
           MTEGFGNGGLRPNCGNPN  LGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA
Sbjct: 1   MTEGFGNGGLRPNCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60

Query: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN 120
           IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYS+SVEADRAIRALDNQYTFPGELTPIN
Sbjct: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPIN 120

Query: 121 VKYADSEKDRLGDL--------NKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV 180
           VKYADSEKDRLG L        NKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV
Sbjct: 121 VKYADSEKDRLGVLEKLYVGCLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV 180

Query: 181 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP 240
           KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRS+NVSGSPRFGHHPQP
Sbjct: 181 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSTNVSGSPRFGHHPQP 240

Query: 241 F-------------------------SLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS 300
           F                         SLGPPRNASQ ASHTPFAPNS+QKPSPQ QEP S
Sbjct: 241 FRPEPPVGPAGGCFPNNSYPGQQNSTSLGPPRNASQVASHTPFAPNSMQKPSPQTQEPSS 300

Query: 301 SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC 360
           SFAQMSSQPMRSTQQV QPP QTDFSKMQNQV  QQPRQDSHQQQNLQPP+ RGVQTFS 
Sbjct: 301 SFAQMSSQPMRSTQQVFQPPTQTDFSKMQNQVLGQQPRQDSHQQQNLQPPSARGVQTFSG 360

Query: 361 TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK 420
           T +SPMGRPSS VEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFE+QLK+EK
Sbjct: 361 TPNSPMGRPSSWVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEQQLKEEK 420

Query: 421 LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV 447
           LQKPNHQ+HSSL GVSSQEV PQPNL SQKL+AQYSSAVRELDCMRLQSKASPVVSPACV
Sbjct: 421 LQKPNHQLHSSLSGVSSQEVLPQPNLLSQKLEAQYSSAVRELDCMRLQSKASPVVSPACV 480

[Close]

BLAST of IVF0022538 vs. NCBI nr
Match: XP_011651537.1 (flowering time control protein FCA isoform X2 [Cucumis sativus])

HSP 1 Score: 806 bits (2083), Expect = 1.31e-292
Identity = 419/480 (87.29%), Postives = 428/480 (89.17%), Query Frame = 0


Query: 1   MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60
           MTEGFGNGGLRPNCGNPN  LGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA
Sbjct: 1   MTEGFGNGGLRPNCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60

Query: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN 120
           IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYS+SVEADRAIRALDNQYTFPGELTPIN
Sbjct: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPIN 120

Query: 121 VKYADSEKDRLGDL--------NKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV 180
           VKYADSEKDRLG L        NKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV
Sbjct: 121 VKYADSEKDRLGVLEKLYVGCLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFV 180

Query: 181 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQP 240
           KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRS+NVSGSPRFGHHPQP
Sbjct: 181 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSTNVSGSPRFGHHPQP 240

Query: 241 F-------------------------SLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS 300
           F                         SLGPPRNASQ ASHTPFAPNS+QKPSPQ QEP S
Sbjct: 241 FRPEPPVGPAGGCFPNNSYPGQQNSTSLGPPRNASQVASHTPFAPNSMQKPSPQTQEPSS 300

Query: 301 SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQPPAVRGVQTFSC 360
           SFAQMSSQPMRSTQQV QPP QTDFSKMQNQV  QQPRQDSHQQQNLQPP+ RGVQTFS 
Sbjct: 301 SFAQMSSQPMRSTQQVFQPPTQTDFSKMQNQVLGQQPRQDSHQQQNLQPPSARGVQTFSG 360

Query: 361 TSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEKQLKQEK 420
           T +SPMGRPSS VEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFE+QLK+EK
Sbjct: 361 TPNSPMGRPSSWVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEQQLKEEK 420

Query: 421 LQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPVVSPACV 447
           LQKPNHQ+HSSL GVSSQEV PQPNL SQKL+AQYSSA  ELDCMRLQSKASPVVSPACV
Sbjct: 421 LQKPNHQLHSSLSGVSSQEVLPQPNLLSQKLEAQYSSA--ELDCMRLQSKASPVVSPACV 478

[Close]

BLAST of IVF0022538 vs. NCBI nr
Match: XP_022157018.1 (CUGBP Elav-like family member 4 [Momordica charantia])

HSP 1 Score: 704 bits (1818), Expect = 4.51e-249
Identity = 369/486 (75.93%), Postives = 402/486 (82.72%), Query Frame = 0


Query: 2   TEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAI 61
            EGFGNGGLRPNCGN NANLGRKRPRNYSNRTVP DHAEA   VKLYVAQVPRTGTEEAI
Sbjct: 202 NEGFGNGGLRPNCGNQNANLGRKRPRNYSNRTVPSDHAEA---VKLYVAQVPRTGTEEAI 261

Query: 62  RPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPINV 121
           RPLFEVHGDIVEIVILRDKITGQQQGSCFVKY++S+EADRAI ALDNQ+TFPGE+ PINV
Sbjct: 262 RPLFEVHGDIVEIVILRDKITGQQQGSCFVKYATSIEADRAIGALDNQFTFPGEMAPINV 321

Query: 122 KYADSEKDRLG--------DLNKNTTKREIEEVFSPYGFVEDIYIIRDDLKQSRGSAFVK 181
           KYAD E++RLG         LNKNTTKREIEEVFSPYGFVEDIYI+RD+LKQSRG AFVK
Sbjct: 322 KYADGERERLGVLEKLYVGSLNKNTTKREIEEVFSPYGFVEDIYIMRDELKQSRGCAFVK 381

Query: 182 YARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSSNVSGSPRFGHHPQPF 241
           YARR+MA+AAIKALNGN+T+RGCDQPLIVRLADPKK R+GEQRS+++SGSP FGHHPQPF
Sbjct: 382 YARREMAMAAIKALNGNYTIRGCDQPLIVRLADPKKSRVGEQRSNSMSGSPNFGHHPQPF 441

Query: 242 --------------------------SLGPPRNASQAASHTPFAPNSIQKPSPQIQEPPS 301
                                     SLGP +NASQ AS+ P APN+IQK  P IQEP S
Sbjct: 442 RPEPPLGAPAGGCFPNNLYPPQQNSASLGPAKNASQVASNAPLAPNTIQKAHPPIQEPSS 501

Query: 302 SFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQ-PRQDSHQQQNLQ-----PPAVRG 361
           SFA + SQPMR+TQQVCQPP Q DFSKMQNQV CQQ PR+DS+QQQN Q     PP   G
Sbjct: 502 SFAHIPSQPMRTTQQVCQPPTQPDFSKMQNQVYCQQQPRKDSYQQQNSQVNENTPPTAHG 561

Query: 362 VQTFSCTSDSPMGRPSSRVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEK 421
           +QTFS   +SP+ RP SRVEV+LECDWSEHTCPDGFKYYYNCVT ES WEKPEEFALFE+
Sbjct: 562 LQTFSGVPNSPLVRPCSRVEVSLECDWSEHTCPDGFKYYYNCVTCESSWEKPEEFALFEQ 621

Query: 422 QLKQEKLQKPNHQIHSSLPGVSSQEVPPQPNLFSQKLDAQYSSAVRELDCMRLQSKASPV 447
           QLKQEKLQK NHQ+HSSLP +SS EV P PN+FSQKL+ Q SSAVRELDCMRLQSKASPV
Sbjct: 622 QLKQEKLQKQNHQLHSSLP-ISSPEVLPHPNVFSQKLEVQSSSAVRELDCMRLQSKASPV 681

[Close]

BLAST of IVF0022538 vs. TAIR 10
Match: AT2G47310.1 (flowering time control protein-related / FCA gamma-related )

HSP 1 Score: 253.8 bits (647), Expect = 2.5e-67
Identity = 160/391 (40.92%), Postives = 220/391 (56.27%), Query Frame = 0


Query: 37  DHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSS 96
           D+A+ S   KLYVA + +T TE  IR +FE +G++ EI++ +DK+TG++   CF+KY   
Sbjct: 103 DNADGS-IAKLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGERAAYCFIKYKKV 162

Query: 97  VEADRAIRALDNQYTFPGELTPINVKYADSEKDRLG---------------DLNKNTTKR 156
            E + AI AL  Q+TFPGE+ P+ V++A++E++R+G                LNK TTK 
Sbjct: 163 EEGNAAIAALTEQFTFPGEMLPVKVRFAEAERERIGFAPVQLPDNPKLYVRCLNKQTTKM 222

Query: 157 EIEEVFSPYGFVEDIYIIRDDLKQSRGSAFVKYARRDMALAAIKALNGNFTMRGCDQPLI 216
           E+ EVFS YG +EDIY+  DD+K  RG AFV+++ ++MALAAIKALNG FT+RG DQPLI
Sbjct: 223 EVNEVFSRYGIIEDIYMALDDMKICRGYAFVQFSCKEMALAAIKALNGLFTIRGSDQPLI 282

Query: 217 VRLADPKKPRIGEQRSSNVSGSPRFGHHPQPFSLGPPRNASQAASHTPFAPNSIQKPSPQ 276
           VR ADPKKPR+GEQRS+                     N   A  H  F PN   +P PQ
Sbjct: 283 VRFADPKKPRLGEQRST--------------------FNTPPAMQH--FDPNWHSQPYPQ 342

Query: 277 IQEPPSSFAQMSSQPMRSTQQVCQPPIQTDFSKMQNQVPCQQPRQDSHQQQNLQ---PPA 336
                  +      P R  Q         DFS   N  P Q  +  S   + L    PPA
Sbjct: 343 -------WENKEPAPPRVVQ-------HHDFSSQPNHFPHQNTQAVSEVHKPLHQDIPPA 402

Query: 337 ----VRGVQTFSCTSDSPMGRPSSRVE--------VTLECDWSEHTCPDGFKYYYNCVTY 392
                +  +T S  + S   + SS           V+ ECDWSEHTCP+G KYY++C+T 
Sbjct: 403 NFEKHQKSETASVETRSDGQKISSHSNAFHEDQNTVSSECDWSEHTCPNGNKYYFHCITC 456

[Close]

BLAST of IVF0022538 vs. TAIR 10
Match: AT4G16280.2 (RNA binding;abscisic acid binding )

HSP 1 Score: 246.9 bits (629), Expect = 3.1e-65
Identity = 187/571 (32.75%), Postives = 257/571 (45.01%), Query Frame = 0


Query: 37  DHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSS 96
           D ++ S  VKL+V  VPRT TEE IRP FE HG+++E+ +++DK TGQQQG CFVKY++S
Sbjct: 112 DVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATS 171

Query: 97  VEADRAIRALDNQYTFPGELTPINVKYADSEKDRL---------GDLNKNTTKREIEEVF 156
            +ADRAIRAL NQ T PG   P+ V+YAD E++R+         G LNK  T++E+EE+F
Sbjct: 172 KDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIF 231

Query: 157 SPYGFVEDIYIIRDDLKQSRGSAFVKYARRDMALAAIKALNGNFTMRGCDQPLIVRLADP 216
             +G VED+Y++RD+ +QSRG  FVKY+ ++ A+AAI  LNG +TMRGC+QPLIVR A+P
Sbjct: 232 LQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEP 291

Query: 217 KKPRIGEQRSS----NVSGSPRF-GHHPQPFS----------------------LGPPRN 276
           K+P+ GE R       +   PRF    P+P S                      +GPP N
Sbjct: 292 KRPKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSGDVSHTNPWRPATSRNVGPPSN 351

Query: 277 ------------------------------------------------------------ 336
                                                                       
Sbjct: 352 TGIRGAGSDFSPKPGQATLPSNQGGPLGGYGVPPLNPLPVPGVSSSATLQQQNRAAGQHI 411

Query: 337 ------------------------ASQAASHTPFA------------------------- 396
                                    +QA    P+A                         
Sbjct: 412 TPLKKPLHSPQGLPLPLRPQTNFPGAQAPLQNPYAYSSQLPTSQLPPQQNISRATAPQTP 471

Query: 397 ------------------PNSIQKPSPQIQEPPSSFAQMSSQPMRSTQQVCQPPIQTDFS 427
                             P S Q+P  ++Q PPS  AQ+ SQ  +S Q   Q   Q   S
Sbjct: 472 LNINLRPTTVSSATVQFPPRSQQQPLQKMQHPPSELAQLLSQQTQSLQATFQSS-QQAIS 531

[Close]

BLAST of IVF0022538 vs. TAIR 10
Match: AT4G16280.4 (RNA binding;abscisic acid binding )

HSP 1 Score: 246.9 bits (629), Expect = 3.1e-65
Identity = 187/571 (32.75%), Postives = 257/571 (45.01%), Query Frame = 0


Query: 37  DHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSS 96
           D ++ S  VKL+V  VPRT TEE IRP FE HG+++E+ +++DK TGQQQG CFVKY++S
Sbjct: 37  DVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATS 96

Query: 97  VEADRAIRALDNQYTFPGELTPINVKYADSEKDRL---------GDLNKNTTKREIEEVF 156
            +ADRAIRAL NQ T PG   P+ V+YAD E++R+         G LNK  T++E+EE+F
Sbjct: 97  KDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIF 156

Query: 157 SPYGFVEDIYIIRDDLKQSRGSAFVKYARRDMALAAIKALNGNFTMRGCDQPLIVRLADP 216
             +G VED+Y++RD+ +QSRG  FVKY+ ++ A+AAI  LNG +TMRGC+QPLIVR A+P
Sbjct: 157 LQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEP 216

Query: 217 KKPRIGEQRSS----NVSGSPRF-GHHPQPFS----------------------LGPPRN 276
           K+P+ GE R       +   PRF    P+P S                      +GPP N
Sbjct: 217 KRPKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSGDVSHTNPWRPATSRNVGPPSN 276

Query: 277 ------------------------------------------------------------ 336
                                                                       
Sbjct: 277 TGIRGAGSDFSPKPGQATLPSNQGGPLGGYGVPPLNPLPVPGVSSSATLQQQNRAAGQHI 336

Query: 337 ------------------------ASQAASHTPFA------------------------- 396
                                    +QA    P+A                         
Sbjct: 337 TPLKKPLHSPQGLPLPLRPQTNFPGAQAPLQNPYAYSSQLPTSQLPPQQNISRATAPQTP 396

Query: 397 ------------------PNSIQKPSPQIQEPPSSFAQMSSQPMRSTQQVCQPPIQTDFS 427
                             P S Q+P  ++Q PPS  AQ+ SQ  +S Q   Q   Q   S
Sbjct: 397 LNINLRPTTVSSATVQFPPRSQQQPLQKMQHPPSELAQLLSQQTQSLQATFQSS-QQAIS 456

[Close]

BLAST of IVF0022538 vs. TAIR 10
Match: AT4G16280.3 (RNA binding;abscisic acid binding )

HSP 1 Score: 226.1 bits (575), Expect = 5.6e-59
Identity = 120/266 (45.11%), Postives = 163/266 (61.28%), Query Frame = 0


Query: 37  DHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSS 96
           D ++ S  VKL+V  VPRT TEE IRP FE HG+++E+ +++DK TGQQQG CFVKY++S
Sbjct: 112 DVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATS 171

Query: 97  VEADRAIRALDNQYTFPGELTPINVKYADSEKDRL---------GDLNKNTTKREIEEVF 156
            +ADRAIRAL NQ T PG   P+ V+YAD E++R+         G LNK  T++E+EE+F
Sbjct: 172 KDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIF 231

Query: 157 SPYGFVEDIYIIRDDLKQSRGSAFVKYARRDMALAAIKALNGNFTMRGCDQPLIVRLADP 216
             +G VED+Y++RD+ +QSRG  FVKY+ ++ A+AAI  LNG +TMRGC+QPLIVR A+P
Sbjct: 232 LQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEP 291

Query: 217 KKPRIGEQRSS----NVSGSPRF-GHHPQPFS----------------------LGPPRN 267
           K+P+ GE R       +   PRF    P+P S                      +GPP N
Sbjct: 292 KRPKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSGDVSHTNPWRPATSRNVGPPSN 351

[Close]

BLAST of IVF0022538 vs. TAIR 10
Match: AT1G03457.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 137.1 bits (344), Expect = 3.4e-32
Identity = 70/178 (39.33%), Postives = 108/178 (60.67%), Query Frame = 0


Query: 40  EASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEA 99
           E    VKL+V QVP+  TE  +  LF     + E+ I+++K T   +G CF+   +  +A
Sbjct: 7   ENEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDA 66

Query: 100 DRAIRALDNQYTFPGELTPINVKYADSEKDRL------GDLNKNTTKREIEEVFSPYGFV 159
           D+ I +  N+ T PG  +P+ VKYAD E +RL      G L KN ++ E++ +FS YG +
Sbjct: 67  DKVINSFHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSETEVQSLFSEYGTI 126

Query: 160 EDIYIIRDDLKQSRGSAFVKYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPR 212
           +D+ I+R  L+ S+G  F+KY  ++ A+AA++ALNG   M G + PLIV+ AD +K R
Sbjct: 127 KDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWADTEKER 184

The following BLAST results are available for this feature:

BLAST of IVF0022538 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8BCZ8	6.0e-66	33.33	Flowering time control protein FCA OS=Oryza sativa subsp. indica OX=39946 GN=FCA...	[more]
Q6K271	6.0e-66	33.33	Flowering time control protein FCA OS=Oryza sativa subsp. japonica OX=39947 GN=F...	[more]
O04425	4.3e-64	32.75	Flowering time control protein FCA OS=Arabidopsis thaliana OX=3702 GN=FCA PE=1 S...	[more]
Q8GZ26	4.8e-31	39.33	RNA-binding protein BRN2 OS=Arabidopsis thaliana OX=3702 GN=BRN2 PE=1 SV=1	[more]
Q9IBD0	4.5e-29	37.14	CUGBP Elav-like family member 1 OS=Danio rerio OX=7955 GN=celf1 PE=1 SV=1	[more]

BLAST of IVF0022538 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T550	1.6e-250	92.92	Flowering time control protein FCA OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BIF0	1.6e-250	92.92	flowering time control protein FCA OS=Cucumis melo OX=3656 GN=LOC103489911 PE=4 ...	[more]
A0A0A0LBT6	1.5e-232	87.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G536140 PE=4 SV=1	[more]
A0A6J1DSB0	2.8e-199	76.08	CUGBP Elav-like family member 4 OS=Momordica charantia OX=3673 GN=LOC111023844 P...	[more]
A0A6J1GA62	1.2e-189	75.26	flowering time control protein FCA OS=Cucurbita moschata OX=3662 GN=LOC111452192...	[more]

BLAST of IVF0022538 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038123.1	0.0	92.92	flowering time control protein FCA [Cucumis melo var. makuwa] >TYK20484.1 flower...	[more]
XP_008447475.2	1.06e-315	92.92	PREDICTED: flowering time control protein FCA [Cucumis melo]	[more]
XP_031738780.1	6.29e-296	87.71	flowering time control protein FCA isoform X1 [Cucumis sativus] >KGN58132.1 hypo...	[more]
XP_011651537.1	1.31e-292	87.29	flowering time control protein FCA isoform X2 [Cucumis sativus]	[more]
XP_022157018.1	4.51e-249	75.93	CUGBP Elav-like family member 4 [Momordica charantia]	[more]

BLAST of IVF0022538 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47310.1	2.5e-67	40.92	flowering time control protein-related / FCA gamma-related	[more]
AT4G16280.2	3.1e-65	32.75	RNA binding;abscisic acid binding	[more]
AT4G16280.4	3.1e-65	32.75	RNA binding;abscisic acid binding	[more]
AT4G16280.3	5.6e-59	45.11	RNA binding;abscisic acid binding	[more]
AT1G03457.1	3.4e-32	39.33	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	SMART	SM00456	ww_5	coord: 343..375 e-value: 6.2E-6 score: 35.7
IPR001202	WW domain	PFAM	PF00397	WW	coord: 345..373 e-value: 3.0E-7 score: 30.4
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 342..375 score: 11.5066
IPR001202	WW domain	CDD	cd00201	WW	coord: 346..375 e-value: 1.93422E-7 score: 45.2114
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 46..122 e-value: 2.1E-15 score: 67.2 coord: 128..203 e-value: 2.8E-14 score: 63.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 47..114 e-value: 2.2E-14 score: 53.0 coord: 131..194 e-value: 2.5E-15 score: 56.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 127..207 score: 14.521706
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 45..126 score: 14.794592
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 131..213 e-value: 9.1E-21 score: 75.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 36..130 e-value: 4.3E-21 score: 76.9
None	No IPR available	GENE3D	2.20.70.10		coord: 329..398 e-value: 1.9E-14 score: 55.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..317
None	No IPR available	PANTHER	PTHR15241:SF308	FLOWERING TIME CONTROL PROTEIN FCA ISOFORM X1	coord: 244..424
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 244..424
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 18..214
None	No IPR available	PANTHER	PTHR15241:SF308	FLOWERING TIME CONTROL PROTEIN FCA ISOFORM X1	coord: 18..214
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 132..228
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 22..129
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 347..380

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0022538.2	IVF0022538.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding