IVF0022512 (gene) Melon (IVF77) v1

Overview


Name	IVF0022512
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	50S ribosomal protein L2, chloroplastic
Location	chr12: 8677150 .. 8678623 (+)
RNA-Seq Expression	IVF0022512
Synteny	IVF0022512

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCAGGGCATAAAGGGGGAGGTCATAAGCGTCTATACCGTAAAATAGATTTTTGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGAGATGGTGAGAAAAGATATATTTTACATCCCAAAGGGGCTATAGTTGGAAGTACCATTGTTTCTAGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGAACTATTGATTTACGTAATTGGAAGTAACCAATTAGGTTTACGACGAAACCTAGAAATCGATCACTGATCCAATTTGAGTACCTCCACAGGATAGACATCAACAGAAAACTGAAGAGTAACGGCAGCAAGTGATTGAGTTCAGTAGTTCCTCATATAAAATTATTGACTCTAGAGATATAGTAATATGGAGAAGACTAAATTGTTTCAAGCACCGACAGAACCATAAGCGTCCCTTGTTTTAAAGAGAGGAGGACGGGTTATTCACATTTCATTTGATGGTCAGAGGCAAATTGAAAGCTAAGCAGTGGTAATTCTAAGGATTCCCGAGGGGAAAAATAGAGATGTCTCCTACGTTACCCGTAATATGTGGAAGTATCGACGTAATTTCGTAGAGTCATTCGGTCTGAATGCTACATGAAGAACATAAGCCAGATGAAGGAACAGGAAGACCTAGGATGTAGAAGATCATAACATGAGTGATTCGGCAGATTTGGATTCCTATATATCCACTCATGTGGTACTTCATTGTACCATATGTATAGATATCATCATCTACATCCAGAAAGTCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGAGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGACCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAAGTGCTGTAGCGAAACTGATTGCAAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATTCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGTCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGAAGTAGTTATGAACCCTGTAAACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTAGTAGAAAAAAACCCGCAACCCTTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA

mRNA sequence

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGGGGAGGTCATAAGCGTCTATACCACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGAGATGGTGAGAAAAGATATATTTTACATCCCAAAGGGGCTATAGTTGGAAGTACCATTGTTTCTAGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAAATCTACTTCAACCGATATGCCCTTAGGCACGACCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAAGTGCTGTAGCGAAACTGATTGCAAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGTCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGAAGTAGTTATGAACCCTGTAAACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTAGTAGAAAAAAACCCGCAACCCTTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA

Coding sequence (CDS)

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGGGGAGGTCATAAGCGTCTATACCACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGAGATGGTGAGAAAAGATATATTTTACATCCCAAAGGGGCTATAGTTGGAAGTACCATTGTTTCTAGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAAATCTACTTCAACCGATATGCCCTTAGGCACGACCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAAGTGCTGTAGCGAAACTGATTGCAAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGTCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGAAGTAGTTATGAACCCTGTAAACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTAGTAGAAAAAAACCCGCAACCCTTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA

Protein sequence

MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRGGHKRLYHIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEVPIKMGNALPLKSTSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGEIGHIKITFWGVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNHPHGGGEGRAPISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK

Homology

[Close]

BLAST of IVF0022512 vs. ExPASy Swiss-Prot
Match: Q4VZK5 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 1.5e-114
Identity = 218/278 (78.42%), Postives = 224/278 (80.58%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGEIGHIKITF 180
           PIKMGNALPL    TDMPLGT IHNIEITLGKGGQLARAA AVAKLIAK G+   +K+  
Sbjct: 121 PIKMGNALPL----TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 W-----------GVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNHPHGGGEGR 240
                        VGQVGNAGVNQKSLGR GSKCWLGKRPVVR VVMNPV+HPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 246
           API RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274

[Close]

BLAST of IVF0022512 vs. ExPASy Swiss-Prot
Match: A4GYV2 (50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa OX=3694 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.1e-113
Identity = 215/278 (77.34%), Postives = 224/278 (80.58%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSN RNNLIYGQHRCGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNTRNNLIYGQHRCGKGRNSRGIITARHRGGGHKRLY 60

Query: 61  ----------HIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                     +IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TI+S TEV
Sbjct: 61  RKIDFRRNEKYIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIISGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGEIGHIKITF 180
           PIKMGNALPL    TDMPLGT IHNIEITLG+GGQLARAA AVAKLIAK G+   +K+  
Sbjct: 121 PIKMGNALPL----TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 W-----------GVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNHPHGGGEGR 240
                        VGQVGNAGVNQKSLGR GSKCWLGKRPVVR VVMNPV+HPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 246
           API RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274

[Close]

BLAST of IVF0022512 vs. ExPASy Swiss-Prot
Match: Q14F95 (50S ribosomal protein L2-A, chloroplastic OS=Populus alba OX=43335 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 2.8e-113
Identity = 215/278 (77.34%), Postives = 224/278 (80.58%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSN RNNLIYGQHRC KGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNTRNNLIYGQHRCSKGRNARGIITARHRGGGHKRLY 60

Query: 61  ----------HIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                     +IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TI+S TEV
Sbjct: 61  RKIDFRRNEKYIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIISGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGEIGHIKITF 180
           PIKMGNALPL   STDMPLGT IHNIEITLG+GGQLARAA AVAKLIAK G+   +K+  
Sbjct: 121 PIKMGNALPL---STDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 W-----------GVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNHPHGGGEGR 240
                        VGQVGNAGVNQKSLGR GSKCWLGKRPVVR VVMNPV+HPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 246
           API RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 275

[Close]

BLAST of IVF0022512 vs. ExPASy Swiss-Prot
Match: Q2L944 (50S ribosomal protein L2, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 2.8e-113
Identity = 215/278 (77.34%), Postives = 222/278 (79.86%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTP TRNGAVDSQVKSNPRNNLIYGQHRCGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPGTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGEIGHIKITF 180
           PIKMGNALPL    TDMPLGT IHNIEITLG+GGQLARAA AVAKLIAK G+   +K+  
Sbjct: 121 PIKMGNALPL----TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 W-----------GVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNHPHGGGEGR 240
                        VGQVGN GVNQKSLGR GSKCWLGKRPVVR VVMNPV+HPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 246
           API RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274

[Close]

BLAST of IVF0022512 vs. ExPASy Swiss-Prot
Match: B1A976 (50S ribosomal protein L2, chloroplastic OS=Carica papaya OX=3649 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 3.6e-113
Identity = 216/278 (77.70%), Postives = 222/278 (79.86%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRN AVDSQVKSNPRNNLIYGQHRCGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNRAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGEIGHIKITF 180
           PIKMGNALPL    TDMPLGT IHNIEITLGKGGQLARAA AVAKLIAK G+   +K+  
Sbjct: 121 PIKMGNALPL----TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 W-----------GVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNHPHGGGEGR 240
                        VGQVGN GVNQKSLGR GSKCWLGKRPVVR VVMNPV+HPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 246
           API RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274

[Close]

BLAST of IVF0022512 vs. ExPASy TrEMBL
Match: A0A513X1K1 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.1e-115
Identity = 222/278 (79.86%), Postives = 228/278 (82.01%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGEIGHIKITF 180
           PIKMGNALPLKSTSTDMPLGT IHNIEITLGKGGQLARAA AVAKLIAK G+   +K+  
Sbjct: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 W-----------GVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNHPHGGGEGR 240
                        VGQVGNAGVNQKSLGR GSKCWLGKRPVVR VVMNPV+HPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 246
           API RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 278

[Close]

BLAST of IVF0022512 vs. ExPASy TrEMBL
Match: A0A249RZD6 (50S ribosomal protein L2, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.7e-113
Identity = 221/286 (77.27%), Postives = 228/286 (79.72%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLK--------STSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGE 180
           PIKMGNALPL+        STSTDMPLGT IHNIEITLGKGGQLARAA AVAKLIAK G+
Sbjct: 121 PIKMGNALPLRVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180

Query: 181 IGHIKITFW-----------GVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNH 240
              +K+               VGQVGNAGVNQKSLGR GSKCWLGKRPVVR VVMNPV+H
Sbjct: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240

Query: 241 PHGGGEGRAPISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 246
           PHGGGEGRAPI RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 286

[Close]

BLAST of IVF0022512 vs. ExPASy TrEMBL
Match: A0A286NG40 (50S ribosomal protein L2, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.7e-113
Identity = 221/286 (77.27%), Postives = 228/286 (79.72%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLK--------STSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGE 180
           PIKMGNALPL+        STSTDMPLGT IHNIEITLGKGGQLARAA AVAKLIAK G+
Sbjct: 121 PIKMGNALPLRVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180

Query: 181 IGHIKITFW-----------GVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNH 240
              +K+               VGQVGNAGVNQKSLGR GSKCWLGKRPVVR VVMNPV+H
Sbjct: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240

Query: 241 PHGGGEGRAPISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 246
           PHGGGEGRAPI RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 286

[Close]

BLAST of IVF0022512 vs. ExPASy TrEMBL
Match: A0A249RY56 (50S ribosomal protein L2, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.7e-113
Identity = 221/286 (77.27%), Postives = 228/286 (79.72%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLK--------STSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGE 180
           PIKMGNALPL+        STSTDMPLGT IHNIEITLGKGGQLARAA AVAKLIAK G+
Sbjct: 121 PIKMGNALPLRVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180

Query: 181 IGHIKITFW-----------GVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNH 240
              +K+               VGQVGNAGVNQKSLGR GSKCWLGKRPVVR VVMNPV+H
Sbjct: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240

Query: 241 PHGGGEGRAPISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 246
           PHGGGEGRAPI RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 286

[Close]

BLAST of IVF0022512 vs. ExPASy TrEMBL
Match: A0A286SB86 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.7e-113
Identity = 221/286 (77.27%), Postives = 228/286 (79.72%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLK--------STSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGE 180
           PIKMGNALPL+        STSTDMPLGT IHNIEITLGKGGQLARAA AVAKLIAK G+
Sbjct: 121 PIKMGNALPLRVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180

Query: 181 IGHIKITFW-----------GVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNH 240
              +K+               VGQVGNAGVNQKSLGR GSKCWLGKRPVVR VVMNPV+H
Sbjct: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240

Query: 241 PHGGGEGRAPISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 246
           PHGGGEGRAPI RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 286

[Close]

BLAST of IVF0022512 vs. NCBI nr
Match: QDH07784.1 (ribosomal protein L2 [Cucumis sativus] >QDH07805.1 ribosomal protein L2 [Cucumis sativus])

HSP 1 Score: 423 bits (1088), Expect = 9.37e-148
Identity = 222/278 (79.86%), Postives = 228/278 (82.01%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGEIGHIKITF 180
           PIKMGNALPLKSTSTDMPLGT IHNIEITLGKGGQLARAA AVAKLIAK G+   +K+  
Sbjct: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 WGV-----------GQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNHPHGGGEGR 240
             V           GQVGNAGVNQKSLGR GSKCWLGKRPVVR VVMNPV+HPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 245
           API RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 278

[Close]

BLAST of IVF0022512 vs. NCBI nr
Match: QTC32975.1 (ribosomal protein L2 [Hibiscus cannabinus])

HSP 1 Score: 419 bits (1077), Expect = 4.44e-146
Identity = 219/278 (78.78%), Postives = 226/278 (81.29%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTP TRNGAVDSQVKSNPRNNLIYGQHRCGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPGTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGEIGHIKITF 180
           PIKMGNALPLKSTSTDMPLGT IHNIEITLG+GGQLARAA AVAKLIAK G+   +K+  
Sbjct: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 WGV-----------GQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNHPHGGGEGR 240
             V           GQVGN GVNQKSLGR GSKCWLGKRPVVR VVMNPV+HPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 245
           API RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 278

[Close]

BLAST of IVF0022512 vs. NCBI nr
Match: YP_009945397.1 (ribosomal protein L2 [Sechium edule] >YP_009945456.1 ribosomal protein L2 [Sechium edule] >QOE55927.1 ribosomal protein L2 [Sechium edule] >QOE55986.1 ribosomal protein L2 [Sechium edule])

HSP 1 Score: 416 bits (1068), Expect = 1.44e-144
Identity = 222/287 (77.35%), Postives = 228/287 (79.44%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLK---------STSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRG 180
           PIKMGNALPLK         STSTDMPLGT IHNIEITLGKGGQLARAA AVAKLIAK G
Sbjct: 121 PIKMGNALPLKGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEG 180

Query: 181 EIGHIKITFWGV-----------GQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVN 240
           +   +K+    V           GQVGNAGVNQKSLGR GSKCWLGKRPVVR VVMNPV+
Sbjct: 181 KSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVD 240

Query: 241 HPHGGGEGRAPISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 245
           HPHGGGEGRAPI RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 HPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 287

[Close]

BLAST of IVF0022512 vs. NCBI nr
Match: AXU40408.1 (ribosomal protein L2 [Gomphogyne cissiformis var. villosa])

HSP 1 Score: 415 bits (1066), Expect = 1.89e-144
Identity = 220/278 (79.14%), Postives = 226/278 (81.29%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGEIGHIKITF 180
           PIKMGNALPL   STDMPLGTTIHNIEITLGKGGQLARAA AVAKLIAK G+   +K+  
Sbjct: 121 PIKMGNALPL---STDMPLGTTIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 WGV-----------GQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNHPHGGGEGR 240
             V           GQVGNAGVNQKSLGR GSKCWLGKRPVVR VVMNPV+HPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 245
           API RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 275

[Close]

BLAST of IVF0022512 vs. NCBI nr
Match: YP_009420859.1 (ribosomal protein L2 [Citrullus colocynthis] >YP_009431621.1 ribosomal protein L2 [Citrullus amarus] >YP_009456211.1 ribosomal protein L2 [Lagenaria siceraria] >YP_009674455.1 ribosomal protein L2 [Siraitia grosvenorii] >ASY96385.1 ribosomal protein L2 [Cucumis melo subsp. agrestis] >ASY96645.1 ribosomal protein L2 [Cucumis melo var. conomon] >ASY96733.1 ribosomal protein L2 [Cucumis melo var. makuwa] >ASY96820.1 ribosomal protein L2 [Cucumis melo var. momordica] >ASY96907.1 ribosomal protein L2 [Cucumis melo var. dudaim] >ASY96994.1 ribosomal protein L2 [Cucumis melo var. cantalupo] >ASY97168.1 ribosomal protein L2 [Cucumis melo var. inodorus] >ASY97342.1 ribosomal protein L2 [Cucumis melo var. flexuosus] >ASY97516.1 ribosomal protein L2 [Cucumis sativus var. hardwickii] >QCY72884.1 ribosomal protein L2 [Cucumis hystrix] >QJF46450.1 ribosomal protein L2 [Cucumis melo])

HSP 1 Score: 415 bits (1066), Expect = 2.79e-144
Identity = 221/286 (77.27%), Postives = 228/286 (79.72%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLK--------STSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGE 180
           PIKMGNALPL+        STSTDMPLGT IHNIEITLGKGGQLARAA AVAKLIAK G+
Sbjct: 121 PIKMGNALPLRVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180

Query: 181 IGHIKITFWGV-----------GQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNH 240
              +K+    V           GQVGNAGVNQKSLGR GSKCWLGKRPVVR VVMNPV+H
Sbjct: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240

Query: 241 PHGGGEGRAPISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 245
           PHGGGEGRAPI RKKPAT WGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 286

[Close]

BLAST of IVF0022512 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-110
Identity = 209/278 (75.18%), Postives = 218/278 (78.42%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQH CGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGEIGHIKITF 180
           PIKMGNALPL    TDMPLGT IHNIEITLG+GGQLARAA AVAKLIAK G+   +K+  
Sbjct: 121 PIKMGNALPL----TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 W-----------GVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNHPHGGGEGR 240
                        VGQVGN GVNQKSLGR GSKCWLGKRPVVR VVMNPV+HPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 246
           API RKKP T WGYPALGRR+RKR KYS+ LILRRRSK
Sbjct: 241 APIGRKKPVTPWGYPALGRRTRKRKKYSETLILRRRSK 274

[Close]

BLAST of IVF0022512 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-110
Identity = 209/278 (75.18%), Postives = 218/278 (78.42%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGR------------GGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQH CGKGR            GGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  H----------IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPKGAIVGSTIVSSTEV 120
                      IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP+GAI+G TIVS TEV
Sbjct: 61  RKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAKRGEIGHIKITF 180
           PIKMGNALPL    TDMPLGT IHNIEITLG+GGQLARAA AVAKLIAK G+   +K+  
Sbjct: 121 PIKMGNALPL----TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 W-----------GVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNHPHGGGEGR 240
                        VGQVGN GVNQKSLGR GSKCWLGKRPVVR VVMNPV+HPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APISRKKPATLWGYPALGRRSRKRNKYSDNLILRRRSK 246
           API RKKP T WGYPALGRR+RKR KYS+ LILRRRSK
Sbjct: 241 APIGRKKPVTPWGYPALGRRTRKRKKYSETLILRRRSK 274

[Close]

BLAST of IVF0022512 vs. TAIR 10
Match: AT2G44065.1 (Ribosomal protein L2 family )

HSP 1 Score: 82.0 bits (201), Expect = 7.2e-16
Identity = 54/140 (38.57%), Postives = 75/140 (53.57%), Query Frame = 0


Query: 102 MGNALPLKSTSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAK--RGEIGHIKI--- 161
           +G+++PL      M +GT IHNIE+  G+G ++ RAA   AK++ +  +G+   IK+   
Sbjct: 59  IGSSMPLGM----MRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKC-LIKLPSG 118

Query: 162 -TFW-------GVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNHPHGGGEGRA 221
            T W        +G V N     K L + G   WLG RP VR V MNP +HPHGGGEG++
Sbjct: 119 DTKWINAKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKS 178

Query: 222 PISRKKPATL---WGYPALG 226
             S  +  T    WG P  G
Sbjct: 179 KSSGSRGRTSVSPWGKPCKG 193

[Close]

BLAST of IVF0022512 vs. TAIR 10
Match: AT2G44065.2 (Ribosomal protein L2 family )

HSP 1 Score: 82.0 bits (201), Expect = 7.2e-16
Identity = 54/140 (38.57%), Postives = 75/140 (53.57%), Query Frame = 0


Query: 102 MGNALPLKSTSTDMPLGTTIHNIEITLGKGGQLARAASAVAKLIAK--RGEIGHIKI--- 161
           +G+++PL      M +GT IHNIE+  G+G ++ RAA   AK++ +  +G+   IK+   
Sbjct: 59  IGSSMPLGM----MRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKC-LIKLPSG 118

Query: 162 -TFW-------GVGQVGNAGVNQKSLGRVGSKCWLGKRPVVREVVMNPVNHPHGGGEGRA 221
            T W        +G V N     K L + G   WLG RP VR V MNP +HPHGGGEG++
Sbjct: 119 DTKWINAKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKS 178

Query: 222 PISRKKPATL---WGYPALG 226
             S  +  T    WG P  G
Sbjct: 179 KSSGSRGRTSVSPWGKPCKG 193

[Close]

BLAST of IVF0022512 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-13
Identity = 73/255 (28.63%), Postives = 103/255 (40.39%), Query Frame = 0


Query: 14  RNGAVDSQVKSNPRNNLIYGQHRCGKGR----GGHKRLYHIYGRIVTIEYDPNRNAYICL 73
           R GA  S  KS       +  HR G  +       +R  ++ G +  I +DP R A +  
Sbjct: 9   RKGAAGSVFKS-------HTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLAR 68

Query: 74  IHYGD-----GEKRYILHPKGAIVGSTIVSSTEVPIKMGNALPLKSTSTDMPLGTTIHNI 133
           + +        +K   +  +G   G  +    +  + +GN LPL S    +P G  I N+
Sbjct: 69  VAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGS----IPEGAVICNV 128

Query: 134 EITLGKGGQLARAASAVAKLIAKRGEIGHIKITFWG-------------VGQVGNAGVNQ 193
           E+ +G  G LARA+   A +IA   E    ++                 +GQV   G  +
Sbjct: 129 ELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTE 188

Query: 194 KSLGRVGS---------KCWLGKRPVVREVVMNPVNHPHGGGE----GRAPISR--KKPA 232
           K L + G+          CW    PVVR V MNPV HPHGGG     G A   R  K   
Sbjct: 189 KPLLKAGNAYHKYKAKRNCW----PVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAG 248

The following BLAST results are available for this feature:

BLAST of IVF0022512 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZK5	1.5e-114	78.42	50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=...	[more]
A4GYV2	2.1e-113	77.34	50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa OX=3694 GN=rpl2-A...	[more]
Q14F95	2.8e-113	77.34	50S ribosomal protein L2-A, chloroplastic OS=Populus alba OX=43335 GN=rpl2-A PE=...	[more]
Q2L944	2.8e-113	77.34	50S ribosomal protein L2, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rpl2-A ...	[more]
B1A976	3.6e-113	77.70	50S ribosomal protein L2, chloroplastic OS=Carica papaya OX=3649 GN=rpl2-A PE=3 ...	[more]

BLAST of IVF0022512 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A513X1K1	1.1e-115	79.86	50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2 PE=3 ...	[more]
A0A249RZD6	3.7e-113	77.27	50S ribosomal protein L2, chloroplastic OS=Cucumis melo var. cantalupensis OX=36...	[more]
A0A286NG40	3.7e-113	77.27	50S ribosomal protein L2, chloroplastic OS=Cucumis melo var. flexuosus OX=112079...	[more]
A0A249RY56	3.7e-113	77.27	50S ribosomal protein L2, chloroplastic OS=Cucumis melo subsp. agrestis OX=21761...	[more]
A0A286SB86	3.7e-113	77.27	50S ribosomal protein L2, chloroplastic OS=Cucumis sativus var. hardwickii OX=31...	[more]

BLAST of IVF0022512 vs. NCBI nr


Match Name	E-value	Identity	Description
QDH07784.1	9.37e-148	79.86	ribosomal protein L2 [Cucumis sativus] >QDH07805.1 ribosomal protein L2 [Cucumis...	[more]
QTC32975.1	4.44e-146	78.78	ribosomal protein L2 [Hibiscus cannabinus]	[more]
YP_009945397.1	1.44e-144	77.35	ribosomal protein L2 [Sechium edule] >YP_009945456.1 ribosomal protein L2 [Sechi...	[more]
AXU40408.1	1.89e-144	79.14	ribosomal protein L2 [Gomphogyne cissiformis var. villosa]	[more]
YP_009420859.1	2.79e-144	77.27	ribosomal protein L2 [Citrullus colocynthis] >YP_009431621.1 ribosomal protein L...	[more]

BLAST of IVF0022512 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00830.1	1.3e-110	75.18	ribosomal protein L2	[more]
ATCG01310.1	1.3e-110	75.18	ribosomal protein L2	[more]
AT2G44065.1	7.2e-16	38.57	Ribosomal protein L2 family	[more]
AT2G44065.2	7.2e-16	38.57	Ribosomal protein L2 family	[more]
AT3G51190.1	4.3e-13	28.63	Ribosomal protein L2 family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002171	Ribosomal protein L2	SMART	SM01383	Ribosomal_L2_2	coord: 38..94 e-value: 6.5E-15 score: 65.5
IPR002171	Ribosomal protein L2	PIRSF	PIRSF002158	RPL2p_RPL2a_RPL8e_RPL2o	coord: 17..245 e-value: 7.0E-45 score: 151.3
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 3..243
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 100..222 e-value: 2.3E-42 score: 156.7
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 101..220 e-value: 3.5E-28 score: 98.3
IPR022666	Ribosomal Proteins L2, RNA binding domain	PFAM	PF00181	Ribosomal_L2	coord: 49..94 e-value: 5.1E-16 score: 58.4
IPR005880	Ribosomal protein L2, bacterial/organellar-type	TIGRFAM	TIGR01171	TIGR01171	coord: 45..244 e-value: 2.9E-67 score: 224.9
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 94..164 e-value: 4.0E-18 score: 67.1
IPR014726	Ribosomal protein L2, domain 3	GENE3D	4.10.950.10	Ribosomal protein L2, domain 3	coord: 165..244 e-value: 1.3E-29 score: 104.1
None	No IPR available	GENE3D	2.40.50.140		coord: 40..92 e-value: 6.3E-16 score: 59.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR13691:SF51	50S RIBOSOMAL PROTEIN L2, CHLOROPLASTIC	coord: 3..243
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 2..101
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 103..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0022512.1	IVF0022512.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003723	RNA binding