IVF0022362 (gene) Melon (IVF77) v1

Overview


Name	IVF0022362
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr02: 12694584 .. 12694934 (+)
RNA-Seq Expression	IVF0022362
Synteny	IVF0022362

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCGAAATCACTAAAAACATCTACTATGAAGCTAATCCTCGTATTCCTATGCTGTACAGCCATTTTCACACTACCAGCGGAGGCCATGAAGGCAGCAGTGGCGCCAACTCAACCTGATCCATTCCTAACAGAGGATATCTCTTTTTTCCCCTGCTTTTCGTTTGTTCCAGAGGCGACGAAATGTATGATCGATGTGTTTAAACACCCAATTGCTCCTCATCCCACTTGTTGCAAGGCCATTTCTAAGCTCAAAAGTTGTTCCTCCTCGTTTTTTAATGGAATTCCTTCTGCTGATATGATTCTGATTAAGAGTGTTTGTACTTCGTGGGGAGCTTCAATTTCTTAG

mRNA sequence

ATGTCGGCGAAATCACTAAAAACATCTACTATGAAGCTAATCCTCGTATTCCTATGCTGTACAGCCATTTTCACACTACCAGCGGAGGCCATGAAGGCAGCAGTGGCGCCAACTCAACCTGATCCATTCCTAACAGAGGATATCTCTTTTTTCCCCTGCTTTTCGTTTGTTCCAGAGGCGACGAAATGTATGATCGATGTGTTTAAACACCCAATTGCTCCTCATCCCACTTGTTGCAAGGCCATTTCTAAGCTCAAAAGTTGTTCCTCCTCGTTTTTTAATGGAATTCCTTCTGCTGATATGATTCTGATTAAGAGTGTTTGTACTTCGTGGGGAGCTTCAATTTCTTAG

Coding sequence (CDS)

ATGTCGGCGAAATCACTAAAAACATCTACTATGAAGCTAATCCTCGTATTCCTATGCTGTACAGCCATTTTCACACTACCAGCGGAGGCCATGAAGGCAGCAGTGGCGCCAACTCAACCTGATCCATTCCTAACAGAGGATATCTCTTTTTTCCCCTGCTTTTCGTTTGTTCCAGAGGCGACGAAATGTATGATCGATGTGTTTAAACACCCAATTGCTCCTCATCCCACTTGTTGCAAGGCCATTTCTAAGCTCAAAAGTTGTTCCTCCTCGTTTTTTAATGGAATTCCTTCTGCTGATATGATTCTGATTAAGAGTGTTTGTACTTCGTGGGGAGCTTCAATTTCTTAG

Protein sequence

MSAKSLKTSTMKLILVFLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEATKCMIDVFKHPIAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWGASIS

Homology

[Close]

BLAST of IVF0022362 vs. ExPASy TrEMBL
Match: A0A5A7U904 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00650 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.8e-57
Identity = 114/116 (98.28%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MSAKSLKTSTMKLILVFLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEA 60
           M+AKSLKTSTMKLIL+FLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEA
Sbjct: 1   MAAKSLKTSTMKLILIFLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEA 60

Query: 61  TKCMIDVFKHPIAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWGASIS 117
           TKCMIDVFKHPIAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWGASIS
Sbjct: 61  TKCMIDVFKHPIAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWGASIS 116

[Close]

BLAST of IVF0022362 vs. ExPASy TrEMBL
Match: A0A0A0LYQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G212820 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.3e-51
Identity = 104/116 (89.66%), Postives = 108/116 (93.10%), Query Frame = 0


Query: 1   MSAKSLKTSTMKLILVFLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEA 60
           M+AKSLKT TMKLILVF+CCTAIF  PA AMK A+APTQP PF TEDISFFPCFSFVPEA
Sbjct: 1   MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEA 60

Query: 61  TKCMIDVFKHPIAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWGASIS 117
           TKCMIDVFKHPIA HPTCCKAISKLKSCSSSFFNGIPSADMI+IKSVCTSWGASIS
Sbjct: 61  TKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCTSWGASIS 116

[Close]

BLAST of IVF0022362 vs. ExPASy TrEMBL
Match: A0A5D3CFS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00210 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.7e-23
Identity = 60/105 (57.14%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 12  KLILVFLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEATKCMIDVFKHP 71
           KL LV L C AI      A    VA   P    +ED S FPC SFVP+ATKC+IDV K+ 
Sbjct: 8   KLPLVLLVCIAILASSVTARPTIVAAATP---TSEDFSLFPCISFVPKATKCVIDVLKNA 67

Query: 72  IAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWGASIS 117
           +APHP+CC+AIS+L  CSS F   IPS+DMIL+KS+C SWG SIS
Sbjct: 68  VAPHPSCCEAISQLHDCSSQFLKDIPSSDMILVKSICASWGVSIS 109

[Close]

BLAST of IVF0022362 vs. ExPASy TrEMBL
Match: A0A5D3CG41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00010 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.4e-22
Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 9   STMKLILVFLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEATKCMIDVF 68
           +++KL LVF  C AI  +   A   A AP+  DPF  E++S   C SF+ EATKC+IDV 
Sbjct: 2   ASIKLPLVFFVCMAILAVSGIAHTGAAAPS--DPFTAEELSLLGCTSFISEATKCVIDVM 61

Query: 69  KHPIAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWG 113
           K+ +APHP+CCKA SKL  CS  F  GIPSADMILIK +C  WG
Sbjct: 62  KNAVAPHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWG 103

[Close]

BLAST of IVF0022362 vs. ExPASy TrEMBL
Match: A0A5A7U483 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00620 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.2e-22
Identity = 57/104 (54.81%), Postives = 69/104 (66.35%), Query Frame = 0


Query: 9   STMKLILVFLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEATKCMIDVF 68
           +++KL LVF  C AI  +   A   A AP+  DPF  E +S   C SF+ EATKC+IDV 
Sbjct: 2   ASIKLPLVFFVCMAILAVSGIAHTGAAAPS--DPFTAEKLSLLGCTSFISEATKCVIDVM 61

Query: 69  KHPIAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWG 113
           K+ +APHP+CCKA SKL  CS  F  GIPSADMILIK +C  WG
Sbjct: 62  KNAVAPHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWG 103

[Close]

BLAST of IVF0022362 vs. NCBI nr
Match: KAA0050081.1 (hypothetical protein E6C27_scaffold675G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 232 bits (591), Expect = 1.01e-76
Identity = 114/116 (98.28%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MSAKSLKTSTMKLILVFLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEA 60
           M+AKSLKTSTMKLIL+FLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEA
Sbjct: 1   MAAKSLKTSTMKLILIFLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEA 60

Query: 61  TKCMIDVFKHPIAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWGASIS 116
           TKCMIDVFKHPIAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWGASIS
Sbjct: 61  TKCMIDVFKHPIAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWGASIS 116

[Close]

BLAST of IVF0022362 vs. NCBI nr
Match: KGN65096.1 (hypothetical protein Csa_004577 [Cucumis sativus])

HSP 1 Score: 211 bits (536), Expect = 2.49e-68
Identity = 104/116 (89.66%), Postives = 108/116 (93.10%), Query Frame = 0


Query: 1   MSAKSLKTSTMKLILVFLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEA 60
           M+AKSLKT TMKLILVF+CCTAIF  PA AMK A+APTQP PF TEDISFFPCFSFVPEA
Sbjct: 1   MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEA 60

Query: 61  TKCMIDVFKHPIAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWGASIS 116
           TKCMIDVFKHPIA HPTCCKAISKLKSCSSSFFNGIPSADMI+IKSVCTSWGASIS
Sbjct: 61  TKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCTSWGASIS 116

[Close]

BLAST of IVF0022362 vs. NCBI nr
Match: KAE8653021.1 (hypothetical protein Csa_004567 [Cucumis sativus])

HSP 1 Score: 119 bits (299), Expect = 2.21e-32
Identity = 59/104 (56.73%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 9   STMKLILVFLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEATKCMIDVF 68
           ++MKL LVFL C AI  +   A   A+AP   DPF  E+ S   C SF+ EAT CM+DV 
Sbjct: 2   ASMKLPLVFLVCIAILAVSGMAHTGALAPA--DPFTAEEFSLLGCTSFISEATNCMVDVM 61

Query: 69  KHPIAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWG 112
           K+ +APHP+CCKA SKL  CSS F  GIPSADMILIK +C  WG
Sbjct: 62  KNAVAPHPSCCKAFSKLNDCSSEFLKGIPSADMILIKGICALWG 103

[Close]

BLAST of IVF0022362 vs. NCBI nr
Match: TYK10345.1 (hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 119 bits (298), Expect = 3.63e-32
Identity = 60/105 (57.14%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 12  KLILVFLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEATKCMIDVFKHP 71
           KL LV L C AI      A    VA   P    +ED S FPC SFVP+ATKC+IDV K+ 
Sbjct: 8   KLPLVLLVCIAILASSVTARPTIVAAATPT---SEDFSLFPCISFVPKATKCVIDVLKNA 67

Query: 72  IAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWGASIS 116
           +APHP+CC+AIS+L  CSS F   IPS+DMIL+KS+C SWG SIS
Sbjct: 68  VAPHPSCCEAISQLHDCSSQFLKDIPSSDMILVKSICASWGVSIS 109

[Close]

BLAST of IVF0022362 vs. NCBI nr
Match: TYK10330.1 (hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (289), Expect = 7.32e-31
Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 9   STMKLILVFLCCTAIFTLPAEAMKAAVAPTQPDPFLTEDISFFPCFSFVPEATKCMIDVF 68
           +++KL LVF  C AI  +   A   A AP+  DPF  E++S   C SF+ EATKC+IDV 
Sbjct: 2   ASIKLPLVFFVCMAILAVSGIAHTGAAAPS--DPFTAEELSLLGCTSFISEATKCVIDVM 61

Query: 69  KHPIAPHPTCCKAISKLKSCSSSFFNGIPSADMILIKSVCTSWG 112
           K+ +APHP+CCKA SKL  CS  F  GIPSADMILIK +C  WG
Sbjct: 62  KNAVAPHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWG 103

The following BLAST results are available for this feature:

BLAST of IVF0022362 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0022362 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U904	1.8e-57	98.28	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LYQ3	4.3e-51	89.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G212820 PE=4 SV=1	[more]
A0A5D3CFS6	1.7e-23	57.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CG41	1.4e-22	54.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U483	3.2e-22	54.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of IVF0022362 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050081.1	1.01e-76	98.28	hypothetical protein E6C27_scaffold675G00650 [Cucumis melo var. makuwa]	[more]
KGN65096.1	2.49e-68	89.66	hypothetical protein Csa_004577 [Cucumis sativus]	[more]
KAE8653021.1	2.21e-32	56.73	hypothetical protein Csa_004567 [Cucumis sativus]	[more]
TYK10345.1	3.63e-32	57.14	hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]	[more]
TYK10330.1	7.32e-31	54.81	hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0022362 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0022362.1	IVF0022362.1	mRNA