IVF0022308 (gene) Melon (IVF77) v1

Overview
NameIVF0022308
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionHistidine-rich glycoprotein-like
Locationchr03: 9203639 .. 9204013 (+)
RNA-Seq ExpressionIVF0022308
SyntenyIVF0022308
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAGACATCTTTACTTTGTCGTCAATGATCCCACTTCCAATAGGAGCAATTGGACATATACTTTGCCTTCAGCAATCCCACTTTTAGTAGGAATGATCGGGCACCTTCACTTTACCTCCAGTATTCTCATTTCTACAAGGAATGATCGGGCATCTACTTTACCGTTAGTAATGTTACTTCTATTAGAAACGATCGAGCACCACCATCCTTTTGATGAGGCAGAGCTTCACCACCACCATTTTGGAGAGAAGAAGCTAGAGCTTTACTATGATCGTTTTGAAGAGCCAGAGGCTAAGTTGCAACATCATCGACATCTTAGAGAGGCGGAGGTAGAGGTGCACCTTTGTCGTCCTCTCAAAGCGTCATCGTGA

mRNA sequence

ATGATCAGACATCTTTACTTTGTCGTCAATGATCCCACTTCCAATAGGAGCAATTGGACATATACTTTGCCTTCAGCAATCCCACTTTTAGTAGGAATGATCGGGCACCTTCACTTTACCTCCAGTATTCTCATTTCTACAAGGAATGATCGGGCATCTACTTTACCGTTAGTAATGTTACTTCTATTAGAAACGATCGAGCACCACCATCCTTTTGATGAGGCAGAGCTTCACCACCACCATTTTGGAGAGAAGAAGCTAGAGCTTTACTATGATCGTTTTGAAGAGCCAGAGGCTAAGTTGCAACATCATCGACATCTTAGAGAGGCGGAGGTAGAGGTGCACCTTTGTCGTCCTCTCAAAGCGTCATCGTGA

Coding sequence (CDS)

ATGATCAGACATCTTTACTTTGTCGTCAATGATCCCACTTCCAATAGGAGCAATTGGACATATACTTTGCCTTCAGCAATCCCACTTTTAGTAGGAATGATCGGGCACCTTCACTTTACCTCCAGTATTCTCATTTCTACAAGGAATGATCGGGCATCTACTTTACCGTTAGTAATGTTACTTCTATTAGAAACGATCGAGCACCACCATCCTTTTGATGAGGCAGAGCTTCACCACCACCATTTTGGAGAGAAGAAGCTAGAGCTTTACTATGATCGTTTTGAAGAGCCAGAGGCTAAGTTGCAACATCATCGACATCTTAGAGAGGCGGAGGTAGAGGTGCACCTTTGTCGTCCTCTCAAAGCGTCATCGTGA

Protein sequence

MIRHLYFVVNDPTSNRSNWTYTLPSAIPLLVGMIGHLHFTSSILISTRNDRASTLPLVMLLLLETIEHHHPFDEAELHHHHFGEKKLELYYDRFEEPEAKLQHHRHLREAEVEVHLCRPLKASS
Homology
[Close]
BLAST of IVF0022308 vs. ExPASy TrEMBL
Match: A0A5A7V1U7 (Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00210 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.6e-64
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 

Query: 1   MIRHLYFVVNDPTSNRSNWTYTLPSAIPLLVGMIGHLHFTSSILISTRNDRASTLPLVML 60
           MIRHLYFVVNDPTSNRSNWTYTLPSAIPLLVGMIGHLHFTSSILISTRNDRASTLPLVML
Sbjct: 1   MIRHLYFVVNDPTSNRSNWTYTLPSAIPLLVGMIGHLHFTSSILISTRNDRASTLPLVML 60

Query: 61  LLLETIEHHHPFDEAELHHHHFGEKKLELYYDRFEEPEAKLQHHRHLREAEVEVHLCRPL 120
           LLLETIEHHHPFDEAELHHHHFGEKKLELYYDRFEEPEAKLQHHRHLREAEVEVHLCRPL
Sbjct: 61  LLLETIEHHHPFDEAELHHHHFGEKKLELYYDRFEEPEAKLQHHRHLREAEVEVHLCRPL 120

Query: 121 KASS 125
           KASS
Sbjct: 121 KASS 124

[Close]
BLAST of IVF0022308 vs. NCBI nr
Match: KAA0059769.1 (histidine-rich glycoprotein-like [Cucumis melo var. makuwa] >TYJ99782.1 histidine-rich glycoprotein-like [Cucumis melo var. makuwa])

HSP 1 Score: 253 bits (646), Expect = 2.79e-82
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 

Query: 1   MIRHLYFVVNDPTSNRSNWTYTLPSAIPLLVGMIGHLHFTSSILISTRNDRASTLPLVML 60
           MIRHLYFVVNDPTSNRSNWTYTLPSAIPLLVGMIGHLHFTSSILISTRNDRASTLPLVML
Sbjct: 1   MIRHLYFVVNDPTSNRSNWTYTLPSAIPLLVGMIGHLHFTSSILISTRNDRASTLPLVML 60

Query: 61  LLLETIEHHHPFDEAELHHHHFGEKKLELYYDRFEEPEAKLQHHRHLREAEVEVHLCRPL 120
           LLLETIEHHHPFDEAELHHHHFGEKKLELYYDRFEEPEAKLQHHRHLREAEVEVHLCRPL
Sbjct: 61  LLLETIEHHHPFDEAELHHHHFGEKKLELYYDRFEEPEAKLQHHRHLREAEVEVHLCRPL 120

Query: 121 KASS 124
           KASS
Sbjct: 121 KASS 124

The following BLAST results are available for this feature:
BLAST of IVF0022308 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0022308 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V1U71.6e-64100.00Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
BLAST of IVF0022308 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0059769.12.79e-82100.00histidine-rich glycoprotein-like [Cucumis melo var. makuwa] >TYJ99782.1 histidin... [more]
BLAST of IVF0022308 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0022308.1IVF0022308.1mRNA