IVF0022226 (gene) Melon (IVF77) v1

Overview


Name	IVF0022226
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	MYND-type domain-containing protein
Location	chr02: 22842474 .. 22843962 (-)
RNA-Seq Expression	IVF0022226
Synteny	IVF0022226

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGAACCCACAGATAATAAATAAATAAACAATAACAAAAATATCAACAACAATAAAACAAAGAGAGAAAGAATTTCTAAAAAAGAGGAAGCACAACGGTTACCATTTCCGATTTCCCACACCAAAGAGAGATACCAACACGCCGCCGTACCTCACTCCAAAATCTCTACTCTCAACGCATGTAATCCCCAAACTCTTCAACATGATTTCCGTCAAGAGGCCAAGAACACGCCGCAATTTCACCGCAGATTCCGATCTATTCGATGTCTTGCCGGACGATCTCCTTATACATCTCCTCTGTCACCTTGCCGCCTCCGCCTCCTCCCCTTCTGACCTCCTCAACCTTCTCTTGACGTAATTACATATATCCTTCTTTTCGTTTTCTTTTTTACTCTGTTTTTTTTTTGTTGTTGTTGGTTTTGTAAATTTCTCTTCTTTTTTCGGATGATTTTTTTGCAGATGTAAGAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTTTTGTCTAAAGCCGGACCGAAGGCGTTTGCAGTAAGAATGCAAAACTGGTGTGATTCATCTCACCGATTTCTGAAACGCTGCGTCGATGCCGGTAATTCGGAAGCGAGTTACACGCTTGGAATGGTTAGTTTTTTCTTTTTTCTTTTTTTGAAAGAAGATGAAGAAATTGTTACTCTGTATTGGAGTTTGAACGAGGATTGATGATATCTGTATTTTTTTCCTTTGTAGATCCGATTTTATTGTTTGAGGAATCGAGGGAGTGGAGCGTCTTTAATGGCGAAAGCAGCGATTAAATCTCACGCCCCGGCGCTATACTCACTCGCCGTCATTCAATTCAACGGCAGCGGTGGCTCTAAAAGCGATAAGGATCTTCAGGCAGGCGTAGCGCTCTGTGCTCGAGCCGCTTTTCTAGGCCATGTGGACGCACTTCGCGAACTCGGCCACTGCCTTCAAGACGGTTACGGTGTGAGACAGAACTCCGACGAAGGCCGCCGCCTCCTCGTCCAAGCCAACGCCCGTGAGCTTGCTACGGTTCTACTCTCCTCCTCGAGTATATGGCAACAACAGCGCCACAACCAATCCGGCAACCTCCCTGATTTGACAGCGACTCGTTGTTCGTTGCTGAGTGATTTCGGTTGTAACGTTCCGGCACCAGAGCCACATCCGGTGAACCTGTTTTTGAGAGAGTGGTTCGAGTCGGAAGGTGAAGTGGCGGCGCGTGGGGGTCTGAGACTTTGTTCGCACAGTGGATGCGGTCGAGCGGAGACTCGGCCGCACGAGTTCCGACGGTGCTCAGTTTGTGGGACAGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGATTGGAAAGTCCGGCATAAAGAGGAGTGTACGACGGTTCAGCGGTGGCGGGATGAGGATGCTAACAATGCCGGCGAGATGTTTGATATTGTAGAAGAGGTTGAGGACGCCAACAATATCGTGGGTATTGTATAAAATCCTAACGCCGCT

mRNA sequence

ACCGAACCCACAGATAATAAATAAATAAACAATAACAAAAATATCAACAACAATAAAACAAAGAGAGAAAGAATTTCTAAAAAAGAGGAAGCACAACGGTTACCATTTCCGATTTCCCACACCAAAGAGAGATACCAACACGCCGCCGTACCTCACTCCAAAATCTCTACTCTCAACGCATGTAATCCCCAAACTCTTCAACATGATTTCCGTCAAGAGGCCAAGAACACGCCGCAATTTCACCGCAGATTCCGATCTATTCGATGTCTTGCCGGACGATCTCCTTATACATCTCCTCTGTCACCTTGCCGCCTCCGCCTCCTCCCCTTCTGACCTCCTCAACCTTCTCTTGACATGTAAGAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTTTTGTCTAAAGCCGGACCGAAGGCGTTTGCAGTAAGAATGCAAAACTGGTGTGATTCATCTCACCGATTTCTGAAACGCTGCGTCGATGCCGGTAATTCGGAAGCGAGTTACACGCTTGGAATGATCCGATTTTATTGTTTGAGGAATCGAGGGAGTGGAGCGTCTTTAATGGCGAAAGCAGCGATTAAATCTCACGCCCCGGCGCTATACTCACTCGCCGTCATTCAATTCAACGGCAGCGGTGGCTCTAAAAGCGATAAGGATCTTCAGGCAGGCGTAGCGCTCTGTGCTCGAGCCGCTTTTCTAGGCCATGTGGACGCACTTCGCGAACTCGGCCACTGCCTTCAAGACGGTTACGGTGTGAGACAGAACTCCGACGAAGGCCGCCGCCTCCTCGTCCAAGCCAACGCCCGTGAGCTTGCTACGGTTCTACTCTCCTCCTCGAGTATATGGCAACAACAGCGCCACAACCAATCCGGCAACCTCCCTGATTTGACAGCGACTCGTTGTTCGTTGCTGAGTGATTTCGGTTGTAACGTTCCGGCACCAGAGCCACATCCGGTGAACCTGTTTTTGAGAGAGTGGTTCGAGTCGGAAGGTGAAGTGGCGGCGCGTGGGGGTCTGAGACTTTGTTCGCACAGTGGATGCGGTCGAGCGGAGACTCGGCCGCACGAGTTCCGACGGTGCTCAGTTTGTGGGACAGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGATTGGAAAGTCCGGCATAAAGAGGAGTGTACGACGGTTCAGCGGTGGCGGGATGAGGATGCTAACAATGCCGGCGAGATGTTTGATATTGTAGAAGAGGTTGAGGACGCCAACAATATCGTGGGTATTGTATAAAATCCTAACGCCGCT

Coding sequence (CDS)

ATGATTTCCGTCAAGAGGCCAAGAACACGCCGCAATTTCACCGCAGATTCCGATCTATTCGATGTCTTGCCGGACGATCTCCTTATACATCTCCTCTGTCACCTTGCCGCCTCCGCCTCCTCCCCTTCTGACCTCCTCAACCTTCTCTTGACATGTAAGAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTTTTGTCTAAAGCCGGACCGAAGGCGTTTGCAGTAAGAATGCAAAACTGGTGTGATTCATCTCACCGATTTCTGAAACGCTGCGTCGATGCCGGTAATTCGGAAGCGAGTTACACGCTTGGAATGATCCGATTTTATTGTTTGAGGAATCGAGGGAGTGGAGCGTCTTTAATGGCGAAAGCAGCGATTAAATCTCACGCCCCGGCGCTATACTCACTCGCCGTCATTCAATTCAACGGCAGCGGTGGCTCTAAAAGCGATAAGGATCTTCAGGCAGGCGTAGCGCTCTGTGCTCGAGCCGCTTTTCTAGGCCATGTGGACGCACTTCGCGAACTCGGCCACTGCCTTCAAGACGGTTACGGTGTGAGACAGAACTCCGACGAAGGCCGCCGCCTCCTCGTCCAAGCCAACGCCCGTGAGCTTGCTACGGTTCTACTCTCCTCCTCGAGTATATGGCAACAACAGCGCCACAACCAATCCGGCAACCTCCCTGATTTGACAGCGACTCGTTGTTCGTTGCTGAGTGATTTCGGTTGTAACGTTCCGGCACCAGAGCCACATCCGGTGAACCTGTTTTTGAGAGAGTGGTTCGAGTCGGAAGGTGAAGTGGCGGCGCGTGGGGGTCTGAGACTTTGTTCGCACAGTGGATGCGGTCGAGCGGAGACTCGGCCGCACGAGTTCCGACGGTGCTCAGTTTGTGGGACAGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGATTGGAAAGTCCGGCATAAAGAGGAGTGTACGACGGTTCAGCGGTGGCGGGATGAGGATGCTAACAATGCCGGCGAGATGTTTGATATTGTAGAAGAGGTTGAGGACGCCAACAATATCGTGGGTATTGTATAA

Protein sequence

MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVLHPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV

Homology

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BLAST of IVF0022226 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 2.9e-124
Identity = 217/326 (66.56%), Postives = 248/326 (76.07%), Query Frame = 0


Query: 14  TADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVLHPLVLSKAGPKAF 73
           T  +DL D +PDDL+I +LC L +++  P+D +N+LLTCKRL  L ++P+VLS+  PKA 
Sbjct: 38  TTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAI 97

Query: 74  AVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPAL 133
           AV+  NW + SHRFLKRCVDAG+ EA YTLGMIRFYCL+NRG+GASLMAKAAI SHAPAL
Sbjct: 98  AVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPAL 157

Query: 134 YSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGR 193
           YSLAVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQDGYGV QN  EGR
Sbjct: 158 YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGR 217

Query: 194 RLLVQANARELATVL---LSSSSIWQQQRHNQSGNLPDLTATRCSLLSDFGCNVPAPEPH 253
           R LVQANARELA VL   + + S W          +P+     C LLSDFGCNVPAPE H
Sbjct: 218 RFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETH 277

Query: 254 PVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVNYCSRGCQAQD 313
           P N FL +WF   G      GLRLCSH+GCGR ETR HEFRRCSVCG VNYCSR CQA D
Sbjct: 278 PANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALD 337

Query: 314 WKVRHKEECTTVQRWRDEDANNAGEM 337
           WK+RHK +C  VQRW +E     G +
Sbjct: 338 WKLRHKMDCAPVQRWLEEGDGGEGNV 363

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BLAST of IVF0022226 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 3.5e-109
Identity = 207/326 (63.50%), Postives = 242/326 (74.23%), Query Frame = 0


Query: 20  FDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVLHPLVLSKAGPKAFAVRMQN 79
           F+ L DDL+I +L  LA SASSPSD L +L TCKRLNRL LHPLVLSKAG +  AV  + 
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 80  WCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVI 139
           W DSSH+FLK CV+AGN +ASY+LGMIRFYCL+N  SGASLMAKAAIKSHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 140 QFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLVQA 199
           QFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV ++  EGRRLL+QA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 200 NARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDFGCNVPAPEPHPVNLFLREW 259
           NARELA  L S  S+   +  +++  L DL+             VP  E HPVN FL+EW
Sbjct: 202 NARELACSLRSYLSL---KSGDENETLTDLSV------------VPVQEIHPVNRFLKEW 261

Query: 260 FESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEEC 319
           F S G V    GLR+CSH GCGR ETR HEFRRCSVCG VNYCSRGCQA DW+ +HK EC
Sbjct: 262 F-SSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVEC 321

Query: 320 TTVQRWRDEDANNAGEMFDIVEEVED 346
           T +  W    A    +   +  E++D
Sbjct: 322 TPLDLWVAAAAEIGDDGEAVAVEIDD 331

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BLAST of IVF0022226 vs. ExPASy TrEMBL
Match: A0A5D3BGS7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00550 PE=4 SV=1)

HSP 1 Score: 720.7 bits (1859), Expect = 3.0e-204
Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0


Query: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60
           MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240
           DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300
           GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 354
           YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of IVF0022226 vs. ExPASy TrEMBL
Match: A0A1S3CLL0 (F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103502322 PE=4 SV=1)

HSP 1 Score: 720.7 bits (1859), Expect = 3.0e-204
Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0


Query: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60
           MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240
           DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300
           GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 354
           YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of IVF0022226 vs. ExPASy TrEMBL
Match: A0A5A7UPI5 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00550 PE=4 SV=1)

HSP 1 Score: 714.9 bits (1844), Expect = 1.6e-202
Identity = 351/353 (99.43%), Postives = 351/353 (99.43%), Query Frame = 0


Query: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60
           MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLC LAASASSPSDLLNLLLTCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCRLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240
           DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300
           GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 354
           YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNA EMFDIVEEVEDANNIVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNADEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of IVF0022226 vs. ExPASy TrEMBL
Match: A0A0A0LNX1 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G002030 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 3.4e-192
Identity = 338/354 (95.48%), Postives = 342/354 (96.61%), Query Frame = 0


Query: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60
           MIS KRPRT RNFT DSDLFDVLPDDLLIHLL  LAASASSPSDLLNLLLTCKRLNRLVL
Sbjct: 1   MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           +P+VL KAGPKAFAVRM+NW DS+HRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240
           DGYGVRQNSDEGRRLLVQANARELATVLLSSSS WQQQRHNQSGNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300
           GCNVPAPEPHPVNLFLREWFESEGEVAAR GLRLCSHSGCGR ETRPHEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIV-EEVEDANNIVGIV 354
           YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMF IV EEVEDANNIVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFGIVEEEVEDANNIVGIV 354

[Close]

BLAST of IVF0022226 vs. ExPASy TrEMBL
Match: A0A6J1E1B7 (F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111429904 PE=4 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 2.6e-176
Identity = 312/354 (88.14%), Postives = 329/354 (92.94%), Query Frame = 0


Query: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60
           MIS KRPRT RNF A+SDLFDVLPDDLLIHLLC LA+SASSPSDLLN LLTCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAVRM+ WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240
           DGYGVR+N+DEGRRLL+QANARELA VLLSSS + +QQRH+Q GNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRV-RQQRHHQFGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300
           GC+ PA EPHPVNLFLREWFESE  VAAR GLRLCSH GCGR ETRPHEFRRCS+CGTVN
Sbjct: 241 GCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNA-GEMFDIVEEVEDANNIVGIV 354
           YCSRGCQAQDWKVRHKEECT VQRW+D + +NA G MF+ VEEVEDA N+VG V
Sbjct: 301 YCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDA-NVVGTV 352

[Close]

BLAST of IVF0022226 vs. NCBI nr
Match: XP_008464430.1 (PREDICTED: F-box protein At1g67340-like [Cucumis melo] >TYJ98453.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 715 bits (1845), Expect = 5.02e-260
Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0


Query: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60
           MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240
           DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300
           GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 353
           YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of IVF0022226 vs. NCBI nr
Match: KAA0057772.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 709 bits (1830), Expect = 9.71e-258
Identity = 351/353 (99.43%), Postives = 351/353 (99.43%), Query Frame = 0


Query: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60
           MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLC LAASASSPSDLLNLLLTCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCRLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240
           DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300
           GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 353
           YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNA EMFDIVEEVEDANNIVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNADEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of IVF0022226 vs. NCBI nr
Match: XP_004138048.1 (F-box protein At1g67340 [Cucumis sativus] >KGN63483.1 hypothetical protein Csa_013606 [Cucumis sativus])

HSP 1 Score: 675 bits (1741), Expect = 3.71e-244
Identity = 338/354 (95.48%), Postives = 342/354 (96.61%), Query Frame = 0


Query: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60
           MIS KRPRT RNFT DSDLFDVLPDDLLIHLL  LAASASSPSDLLNLLLTCKRLNRLVL
Sbjct: 1   MISSKRPRTCRNFTVDSDLFDVLPDDLLIHLLSRLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           +P+VL KAGPKAFAVRM+NW DS+HRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  NPMVLCKAGPKAFAVRMRNWSDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240
           DGYGVRQNSDEGRRLLVQANARELATVLLSSSS WQQQRHNQSGNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSTWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300
           GCNVPAPEPHPVNLFLREWFESEGEVAAR GLRLCSHSGCGR ETRPHEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARVGLRLCSHSGCGRGETRPHEFRRCSVCGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEE-VEDANNIVGIV 353
           YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMF IVEE VEDANNIVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFGIVEEEVEDANNIVGIV 354

[Close]

BLAST of IVF0022226 vs. NCBI nr
Match: KAG7023063.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 625 bits (1611), Expect = 2.23e-224
Identity = 313/354 (88.42%), Postives = 330/354 (93.22%), Query Frame = 0


Query: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60
           MIS KRPRT RNF A+SDLFDVLPDDLLIHLLC LA+SASSPSDLLNLLLTCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAVRM+ WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKNDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240
           DGYGVR+NSDEGRRLL+QANARELA VLLSSS + +QQRH+Q GNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRV-RQQRHHQFGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300
           GC+ PA EPHPVNLFLREWFESE  VAAR GLRLCSH GCGR ETRPHEFRRCS+CGTVN
Sbjct: 241 GCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGE-MFDIVEEVEDANNIVGIV 353
           YCSRGCQAQDWKVRHKEECT VQRW+D + +NAG  MF+ VEEVEDAN +VG V
Sbjct: 301 YCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDAN-VVGTV 352

[Close]

BLAST of IVF0022226 vs. NCBI nr
Match: XP_023516460.1 (F-box protein At1g67340-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 624 bits (1610), Expect = 3.16e-224
Identity = 313/354 (88.42%), Postives = 330/354 (93.22%), Query Frame = 0


Query: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60
           MIS KRPRT RNF A+SDLFDVLPDDLLIHLLC LA+SASSPSDLLNLLLTCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAVRM+ WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240
           DGYGVR+NSDEGRRLL+QANARELA VLLSSS + +QQRH+Q GNLPDLTATRCSLLSDF
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRV-RQQRHHQFGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300
           GC+ PA EPHPVNLFLREWFESE  VAAR GLRLCSH GCGR ETRPHEFRRCS+CGTVN
Sbjct: 241 GCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGE-MFDIVEEVEDANNIVGIV 353
           YCSRGCQAQDWKVRHKEECT VQRW+D + +NAG  +F+ VEEVEDAN +VG V
Sbjct: 301 YCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGIFNAVEEVEDAN-VVGTV 352

[Close]

BLAST of IVF0022226 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 446.4 bits (1147), Expect = 2.1e-125
Identity = 217/326 (66.56%), Postives = 248/326 (76.07%), Query Frame = 0


Query: 14  TADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVLHPLVLSKAGPKAF 73
           T  +DL D +PDDL+I +LC L +++  P+D +N+LLTCKRL  L ++P+VLS+  PKA 
Sbjct: 38  TTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAI 97

Query: 74  AVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPAL 133
           AV+  NW + SHRFLKRCVDAG+ EA YTLGMIRFYCL+NRG+GASLMAKAAI SHAPAL
Sbjct: 98  AVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPAL 157

Query: 134 YSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGR 193
           YSLAVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQDGYGV QN  EGR
Sbjct: 158 YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGR 217

Query: 194 RLLVQANARELATVL---LSSSSIWQQQRHNQSGNLPDLTATRCSLLSDFGCNVPAPEPH 253
           R LVQANARELA VL   + + S W          +P+     C LLSDFGCNVPAPE H
Sbjct: 218 RFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETH 277

Query: 254 PVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVNYCSRGCQAQD 313
           P N FL +WF   G      GLRLCSH+GCGR ETR HEFRRCSVCG VNYCSR CQA D
Sbjct: 278 PANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALD 337

Query: 314 WKVRHKEECTTVQRWRDEDANNAGEM 337
           WK+RHK +C  VQRW +E     G +
Sbjct: 338 WKLRHKMDCAPVQRWLEEGDGGEGNV 363

[Close]

BLAST of IVF0022226 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 396.4 bits (1017), Expect = 2.5e-110
Identity = 207/326 (63.50%), Postives = 242/326 (74.23%), Query Frame = 0


Query: 20  FDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVLHPLVLSKAGPKAFAVRMQN 79
           F+ L DDL+I +L  LA SASSPSD L +L TCKRLNRL LHPLVLSKAG +  AV  + 
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 80  WCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVI 139
           W DSSH+FLK CV+AGN +ASY+LGMIRFYCL+N  SGASLMAKAAIKSHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 140 QFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLVQA 199
           QFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV ++  EGRRLL+QA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 200 NARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDFGCNVPAPEPHPVNLFLREW 259
           NARELA  L S  S+   +  +++  L DL+             VP  E HPVN FL+EW
Sbjct: 202 NARELACSLRSYLSL---KSGDENETLTDLSV------------VPVQEIHPVNRFLKEW 261

Query: 260 FESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEEC 319
           F S G V    GLR+CSH GCGR ETR HEFRRCSVCG VNYCSRGCQA DW+ +HK EC
Sbjct: 262 F-SSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVEC 321

Query: 320 TTVQRWRDEDANNAGEMFDIVEEVED 346
           T +  W    A    +   +  E++D
Sbjct: 322 TPLDLWVAAAAEIGDDGEAVAVEIDD 331

[Close]

BLAST of IVF0022226 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 45.1 bits (105), Expect = 1.4e-04
Identity = 20/42 (47.62%), Postives = 25/42 (59.52%), Query Frame = 0


Query: 278 SGCGRAETRPHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEEC 320
           S CG+A T     ++CS C +V YCS  CQ  DWK  HK +C
Sbjct: 65  SVCGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKC 101

[Close]

BLAST of IVF0022226 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 43.9 bits (102), Expect = 3.1e-04
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 292 RCSVCGTVNYCSRGCQAQDWKVRHKEECTTVQ 324
           RCS C +V YCS  CQ   W+V HK+EC  V+
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of IVF0022226 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 43.9 bits (102), Expect = 3.1e-04
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 292 RCSVCGTVNYCSRGCQAQDWKVRHKEECTTVQ 324
           RCS C +V YCS  CQ   W+V HK+EC  V+
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

The following BLAST results are available for this feature:

BLAST of IVF0022226 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	2.9e-124	66.56	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	3.5e-109	63.50	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]

BLAST of IVF0022226 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGS7	3.0e-204	100.00	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00550 ...	[more]
A0A1S3CLL0	3.0e-204	100.00	F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103502322 PE=4 SV=1	[more]
A0A5A7UPI5	1.6e-202	99.43	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00550 ...	[more]
A0A0A0LNX1	3.4e-192	95.48	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G002030 P...	[more]
A0A6J1E1B7	2.6e-176	88.14	F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111429904 PE=4 ...	[more]

BLAST of IVF0022226 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464430.1	5.02e-260	100.00	PREDICTED: F-box protein At1g67340-like [Cucumis melo] >TYJ98453.1 F-box protein...	[more]
KAA0057772.1	9.71e-258	99.43	F-box protein [Cucumis melo var. makuwa]	[more]
XP_004138048.1	3.71e-244	95.48	F-box protein At1g67340 [Cucumis sativus] >KGN63483.1 hypothetical protein Csa_0...	[more]
KAG7023063.1	2.23e-224	88.42	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023516460.1	3.16e-224	88.42	F-box protein At1g67340-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0022226 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	2.1e-125	66.56	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	2.5e-110	63.50	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT2G24640.1	1.4e-04	47.62	ubiquitin-specific protease 19	[more]
AT1G17110.1	3.1e-04	53.13	ubiquitin-specific protease 15	[more]
AT1G17110.2	3.1e-04	53.13	ubiquitin-specific protease 15	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 280..319 e-value: 1.8E-7 score: 31.1
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 277..319 score: 11.213773
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 78..223 e-value: 3.6E-17 score: 64.8
None	No IPR available	GENE3D	6.10.140.2220		coord: 258..325 e-value: 6.8E-11 score: 43.7
None	No IPR available	PANTHER	PTHR46758:SF9	HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN	coord: 1..345
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 72..199
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 274..324
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 1..345
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 11..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0022226.1	IVF0022226.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding