IVF0022225 (gene) Melon (IVF77) v1

Overview
NameIVF0022225
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionBTB/POZ domain-containing protein
Locationchr04: 4625838 .. 4626197 (+)
RNA-Seq ExpressionIVF0022225
SyntenyIVF0022225
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATTTGTACTAAAAGAAGAAGGTGGAAAGCGACGGTGCAGGTGGAAAAAAATGCGGGTGGAAAGCCATTTGAAAATTTGAAGAATGTTAGAACCGGAAGAAATTTGAAGAAAATTTTGAGAACTCGGTATTTTTTACCGATACATGCAGAAAATAGAGGAAAAATCCAAAGGTTGAAGAAGGAACAGAAGCGTGAAACGAAACAACTCATTGATACTTTTGGTGGTGCAAACCGATTAAAAAAGGAAGGGTGTGCAGACGGTGAAAAAGCGACGAAAGAGAAAGCGACGGTGGAAAAACGGAAGAGAAAGCTACGGTGGAAAATCGACGGTGGAAATGTGTCGGAAAGCCTTTAA

mRNA sequence

ATGAAAATTTGTACTAAAAGAAGAAGGTGGAAAGCGACGGTGCAGGTGGAAAAAAATGCGGGTGGAAAGCCATTTGAAAATTTGAAGAATGTTAGAACCGGAAGAAATTTGAAGAAAATTTTGAGAACTCGGTATTTTTTACCGATACATGCAGAAAATAGAGGAAAAATCCAAAGGTTGAAGAAGGAACAGAAGCGTGAAACGAAACAACTCATTGATACTTTTGGTGGTGCAAACCGATTAAAAAAGGAAGGGTGTGCAGACGGTGAAAAAGCGACGAAAGAGAAAGCGACGGTGGAAAAACGGAAGAGAAAGCTACGGTGGAAAATCGACGGTGGAAATGTGTCGGAAAGCCTTTAA

Coding sequence (CDS)

ATGAAAATTTGTACTAAAAGAAGAAGGTGGAAAGCGACGGTGCAGGTGGAAAAAAATGCGGGTGGAAAGCCATTTGAAAATTTGAAGAATGTTAGAACCGGAAGAAATTTGAAGAAAATTTTGAGAACTCGGTATTTTTTACCGATACATGCAGAAAATAGAGGAAAAATCCAAAGGTTGAAGAAGGAACAGAAGCGTGAAACGAAACAACTCATTGATACTTTTGGTGGTGCAAACCGATTAAAAAAGGAAGGGTGTGCAGACGGTGAAAAAGCGACGAAAGAGAAAGCGACGGTGGAAAAACGGAAGAGAAAGCTACGGTGGAAAATCGACGGTGGAAATGTGTCGGAAAGCCTTTAA

Protein sequence

MKICTKRRRWKATVQVEKNAGGKPFENLKNVRTGRNLKKILRTRYFLPIHAENRGKIQRLKKEQKRETKQLIDTFGGANRLKKEGCADGEKATKEKATVEKRKRKLRWKIDGGNVSESL
Homology
[Close]
BLAST of IVF0022225 vs. ExPASy TrEMBL
Match: A0A5D3E6N5 (BTB/POZ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008270 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.4e-09
Identity = 43/55 (78.18%), Postives = 43/55 (78.18%), Query Frame = 0 

Query: 56  KIQRLKKEQKRETKQLIDTFGGANRLKKEGCADGEKATKEKATVEK-RKRKLRWK 110
           K  RLK EQK ETKQL  T GGANRLKKEG ADG KATKEK TVEK RKRK RWK
Sbjct: 78  KSTRLKIEQKLETKQLTHTLGGANRLKKEGRADGGKATKEKPTVEKRRKRKRRWK 132

[Close]
BLAST of IVF0022225 vs. ExPASy TrEMBL
Match: A0A5A7T8K1 (Proton-dependent oligopeptide transporter family OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00050 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.0e-04
Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 0 

Query: 59  RLKKEQKR-------ETKQLIDTFGGANRLKKEGCADGEKATKEKATVEKRKRKLRWK 110
           RLKKEQK        E K+ IDT GGAN+LKKEG AD  K T++K  VEKRK   +WK
Sbjct: 5   RLKKEQKHPKVEEGTEAKKPIDTLGGANQLKKEGRADDGKVTEKKPMVEKRKAFKKWK 62

[Close]
BLAST of IVF0022225 vs. NCBI nr
Match: KAA0063265.1 (BTB/POZ domain-containing protein [Cucumis melo var. makuwa] >TYK31509.1 BTB/POZ domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 2.94e-13
Identity = 47/68 (69.12%), Postives = 48/68 (70.59%), Query Frame = 0 

Query: 56  KIQRLKKEQKRETKQLIDTFGGANRLKKEGCADGEKATKEKATVEKR-KRKLRWKIDG-- 115
           K  RLK EQK ETKQL  T GGANRLKKEG ADG KATKEK TVEKR KRK RWK     
Sbjct: 78  KSTRLKIEQKLETKQLTHTLGGANRLKKEGRADGGKATKEKPTVEKRRKRKRRWKNGRES 137

Query: 116 -GNVSESL 119
            G  +ESL
Sbjct: 138 YGGKTESL 145

[Close]
BLAST of IVF0022225 vs. NCBI nr
Match: KAA0039218.1 (Proton-dependent oligopeptide transporter family [Cucumis melo var. makuwa] >TYK00406.1 Proton-dependent oligopeptide transporter family [Cucumis melo var. makuwa])

HSP 1 Score: 53.9 bits (128), Expect = 1.94e-05
Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 0 

Query: 59  RLKKEQKR-------ETKQLIDTFGGANRLKKEGCADGEKATKEKATVEKRKRKLRWK 109
           RLKKEQK        E K+ IDT GGAN+LKKEG AD  K T++K  VEKRK   +WK
Sbjct: 5   RLKKEQKHPKVEEGTEAKKPIDTLGGANQLKKEGRADDGKVTEKKPMVEKRKAFKKWK 62

The following BLAST results are available for this feature:
BLAST of IVF0022225 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0022225 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3E6N51.4e-0978.18BTB/POZ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7T8K14.0e-0456.90Proton-dependent oligopeptide transporter family OS=Cucumis melo var. makuwa OX=... [more]
BLAST of IVF0022225 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0063265.12.94e-1369.12BTB/POZ domain-containing protein [Cucumis melo var. makuwa] >TYK31509.1 BTB/POZ... [more]
KAA0039218.11.94e-0556.90Proton-dependent oligopeptide transporter family [Cucumis melo var. makuwa] >TYK... [more]
BLAST of IVF0022225 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0022225.1IVF0022225.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006857 oligopeptide transport
molecular_function GO:0022857 transmembrane transporter activity