IVF0022165 (gene) Melon (IVF77) v1

Overview


Name	IVF0022165
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RAB GTPase homolog A4C
Location	chr04: 23305619 .. 23308106 (+)
RNA-Seq Expression	IVF0022165
Synteny	IVF0022165

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGATTTTGGTCGTGCGTGGATGTGCCATGTTAGGAGACGTTGACCATTCCAAAACGAAGAACGAAAGAAAGAGAGAGGAAGAACAATGAACCGTTAAAAAGGGAAGCATTCAACAAAGTCGTGGCTGCTCTTTTCTTTCAACTTTCCTCCTGCATCTCCATGTCAAAAACGTCTTCCCATTTCCTTTCAATTCTTTTTCCCTAAACCCTTTTCGTCTAACCCCCAGATTCTGTTTCTAATCCCATCAAGCGATCGATTGATTGATTGTTCCTTTTCTTGATTGATCGATCGATCGCTTGGTGTTCCCTTTTTCCCCATTCTCTTTTCTTTCAAATATGTCTAATTTGCAATCCAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTTGTCTTGATCGGGGATTCTGCAGTCGGCAAATCCCAACTCCTTTCTCGTTTTGCTAGGAATGAGTTCAGTTTGGATTCCAAGGCCACAATTGGAGTTGAATTTCAGACCAAGACGCTTAACATTGACCAGAAAGCTATCAAGGCTCAGATATGGGATACTGCTGGACAGGAGAGGTACAAAAACCGCCCTGTTTTCAGGGTTTTCCCTTTTCTTTTGCTTTTTTTCTTTAATTATATTGGATTTATTTCGACGATGTGTTAATTCATTATAAATCTTGAACTTAATAATGGGTCTTGCCAACTTTCTTTTTAGATAGTCGAAATGCACCGAAATTTTGGGAAGATCTTCCTTCATATTATTGGTTTCAGAATGTTCATGTTGATGATTTATCCACATATTTAATTTTACTTACAACTTGTGAAGTACTTCCTAATAATTCAGAAAGAAACTGCACTAAAACATTGTACAACTCTATCTTATGTCCCGTGTAAAAAGTAGAATTGATGATAATCTTTTAAATGTGGAAACAATCTTTTTGTAACTTCTCGACTTCTTGTTTCTGTCTCTTGTTGGTTCGGTTTACTTTTCTGTTTTTTTCCCTCCCCTGCCCCTGCTACATCTTGGAACAATGGGTTTTATATAGATCAGTTGATATCGATATATATTGTCATCCAATCATAAGCACTATGGACCTGAAAAGTAACGTAATTGTATCCAATTCAGATTCATCTCCATTTTTATAAGGAAAATCCTCCTTTATAACCATGGTATCACGTTTCCTATAGTGAACGGTTGAACATTAAGCTTTGAGGCTACCGGCCTGTGATCAGCGGCAGGGACTGCTGAATGACTTAGGAAACTTGTAAATATGTGGCCTTAAGGACCTTATAAATTTATAATCACTTGGTACAATTTCTTTATGACCAATGTTGAATCCCTTGGTTGGGGCTCATATTGTTGCTTTTTGACTTAATTATGTTAGTTTTCCATAGCCTTACATGGTAGATTGTACAGTAGTGTCCCTTGAGTTCTAAGGAGTTCTTGTTTTGCTCTCGTATTTCGACAGAGACTATAATTTGAAAAATTACCTGTCTAACATGATGTTCGCCATATGCGTAGCCGTGATATTGCCTATGGTTTGCATGAATATTTGCTAAGAGCAATCAAGCCGTGATATTGTTTTGTAATTCCTTTATATAGTTGCTGTGGGCAATATAGGAAAATTTTATACGTTGGTGGATTGTTCAGACTTTCGTTCCACAGTTGATGAAACTACTCCTTAAAAGCTGCAAATTTTTCTTCTTTTCTCTTATTAGTGATTAGTGATGGTTTTCAGGTATCGTGCAGTGACAAGTGCATATTACAGGGGTGCCGTGGGGGCAATGCTGGTCTATGACATGACGAAGCGTCAGTCATTCGATCATATAGCTAGGTGGTTAGAGGAACTGCGTGGCCATGCAGACAAGAATATCGTTATCATGCTTATAGGAAACAAGTCCGATCTAGGTTCTCTTCGTGTTGTGCCTACAGAAGACGCAAAAGAGTTTGCTCAAATGGAGAATCTGTTTTTTATGGAAACGTCAGCACTTGAGGCAACTAATGTAGAGGCAGCATTCAATACCATACTGACAGAAATTTACCGAGTTATTAGCAAGAAGGCGCTGGTTGCAAACGATGAAACTGATTCTGGAGGAAGCTCATCACTCCTCAAAGGAACAAAAATTGTTGTCCCTGGACAAGAGCCTCAAGCTGCAAGCTCTGGTTGTTGCCGGAGTTGACAAAGTATTCTCCCTTGGTTTCACCATATTTTCACATGAATTACTCCTTTTTACACTTTACAGCTTACACAAATACAAATCCCTCTGCCGCTAGAAGAGCAGAAGAAGAAGAAAGATAGCAAGTGGTTGATCTCTATCTAATCTTTAATTTTGGTCTTCAAGAGACTAGTGTAATTCATATACTTTTGAGTTGATCATACAAGGTAAATAGTTCCTCTGCTTTAAGCTTTTTGTTTAGAGGCTTTATCGCCAACATAATCTTCATTTTGGTTGAGTAAAATCTTCATATTCTCATCCTTGTCTTCCTGTCTGGAAACCAC

mRNA sequence

GAGATTTTGGTCGTGCGTGGATGTGCCATGTTAGGAGACGTTGACCATTCCAAAACGAAGAACGAAAGAAAGAGAGAGGAAGAACAATGAACCGTTAAAAAGGGAAGCATTCAACAAAGTCGTGGCTGCTCTTTTCTTTCAACTTTCCTCCTGCATCTCCATGTCAAAAACGTCTTCCCATTTCCTTTCAATTCTTTTTCCCTAAACCCTTTTCGTCTAACCCCCAGATTCTGTTTCTAATCCCATCAAGCGATCGATTGATTGATTGTTCCTTTTCTTGATTGATCGATCGATCGCTTGGTGTTCCCTTTTTCCCCATTCTCTTTTCTTTCAAATATGTCTAATTTGCAATCCAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTTGTCTTGATCGGGGATTCTGCAGTCGGCAAATCCCAACTCCTTTCTCGTTTTGCTAGGAATGAGTTCAGTTTGGATTCCAAGGCCACAATTGGAGTTGAATTTCAGACCAAGACGCTTAACATTGACCAGAAAGCTATCAAGGCTCAGATATGGGATACTGCTGGACAGGAGAGGTATCGTGCAGTGACAAGTGCATATTACAGGGGTGCCGTGGGGGCAATGCTGGTCTATGACATGACGAAGCGTCAGTCATTCGATCATATAGCTAGGTGGTTAGAGGAACTGCGTGGCCATGCAGACAAGAATATCGTTATCATGCTTATAGGAAACAAGTCCGATCTAGGTTCTCTTCGTGTTGTGCCTACAGAAGACGCAAAAGAGTTTGCTCAAATGGAGAATCTGTTTTTTATGGAAACGTCAGCACTTGAGGCAACTAATGTAGAGGCAGCATTCAATACCATACTGACAGAAATTTACCGAGTTATTAGCAAGAAGGCGCTGGTTGCAAACGATGAAACTGATTCTGGAGGAAGCTCATCACTCCTCAAAGGAACAAAAATTGTTGTCCCTGGACAAGAGCCTCAAGCTGCAAGCTCTGGTTGTTGCCGGAGTTGACAAAGTATTCTCCCTTGGTTTCACCATATTTTCACATGAATTACTCCTTTTTACACTTTACAGCTTACACAAATACAAATCCCTCTGCCGCTAGAAGAGCAGAAGAAGAAGAAAGATAGCAAGTGGTTGATCTCTATCTAATCTTTAATTTTGGTCTTCAAGAGACTAGTGTAATTCATATACTTTTGAGTTGATCATACAAGGTAAATAGTTCCTCTGCTTTAAGCTTTTTGTTTAGAGGCTTTATCGCCAACATAATCTTCATTTTGGTTGAGTAAAATCTTCATATTCTCATCCTTGTCTTCCTGTCTGGAAACCAC

Coding sequence (CDS)

ATGTCTAATTTGCAATCCAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTTGTCTTGATCGGGGATTCTGCAGTCGGCAAATCCCAACTCCTTTCTCGTTTTGCTAGGAATGAGTTCAGTTTGGATTCCAAGGCCACAATTGGAGTTGAATTTCAGACCAAGACGCTTAACATTGACCAGAAAGCTATCAAGGCTCAGATATGGGATACTGCTGGACAGGAGAGGTATCGTGCAGTGACAAGTGCATATTACAGGGGTGCCGTGGGGGCAATGCTGGTCTATGACATGACGAAGCGTCAGTCATTCGATCATATAGCTAGGTGGTTAGAGGAACTGCGTGGCCATGCAGACAAGAATATCGTTATCATGCTTATAGGAAACAAGTCCGATCTAGGTTCTCTTCGTGTTGTGCCTACAGAAGACGCAAAAGAGTTTGCTCAAATGGAGAATCTGTTTTTTATGGAAACGTCAGCACTTGAGGCAACTAATGTAGAGGCAGCATTCAATACCATACTGACAGAAATTTACCGAGTTATTAGCAAGAAGGCGCTGGTTGCAAACGATGAAACTGATTCTGGAGGAAGCTCATCACTCCTCAAAGGAACAAAAATTGTTGTCCCTGGACAAGAGCCTCAAGCTGCAAGCTCTGGTTGTTGCCGGAGTTGA

Protein sequence

MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS

Homology

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BLAST of IVF0022165 vs. ExPASy Swiss-Prot
Match: Q9FE79 (Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.4e-100
Identity = 181/220 (82.27%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
           MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           +K IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK+DLG+LR VPTEDAKEFAQ ENLFFMETSAL++ NVE +F T+LTEIYR++
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCC 221
           SKK LVAN+E +SGG SSLL+GTKIVV G+E ++   GCC
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCC 220

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BLAST of IVF0022165 vs. ExPASy Swiss-Prot
Match: P25766 (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 SV=2)

HSP 1 Score: 360.9 bits (925), Expect = 1.0e-98
Identity = 182/214 (85.05%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 10  QKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIW 69
           QKIDYVFKVVLIGDSAVGKSQLL+RFARNEF+LDSKATIGVEFQT+TL+ID + +KAQIW
Sbjct: 13  QKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIW 72

Query: 70  DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNK 129
           DTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKNIVIMLIGNK
Sbjct: 73  DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNK 132

Query: 130 SDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISKKALVAND 189
           SDLG+LRVVPTEDAKEFA+ ENLFFMETSALE+TNVE AF T+LTEIYR++SKK LVAN+
Sbjct: 133 SDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANE 192

Query: 190 ETDSGGSSSLLKGTKIVVPGQEP-QAASSGCCRS 223
           E DS G+SSLLKGTKIVVPGQEP     + CC S
Sbjct: 193 EVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226

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BLAST of IVF0022165 vs. ExPASy Swiss-Prot
Match: Q9LH50 (Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 5.1e-98
Identity = 180/220 (81.82%), Postives = 200/220 (90.91%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
           MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RFARNEFS+DSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
            K +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDH+A+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK DLGSLR VPTEDA+EFAQ ENLFFMETSALEATNVE AF TILTEIYR+I
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCC 221
           SKK+L A+D+ D+ G+SSLLKGT+I++P ++      GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

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BLAST of IVF0022165 vs. ExPASy Swiss-Prot
Match: Q40191 (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.3e-85
Identity = 162/216 (75.00%), Postives = 187/216 (86.57%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQI 68
           N KIDYVFKVVLIGDSAVGKSQ+L+RFARNEFSLDSK+TIGVEFQT+TL ID K +KAQI
Sbjct: 11  NAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 70

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGN 128
           WDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDHI RWLEELR HADKNIVI+LIGN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGN 130

Query: 129 KSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISKKALVAN 188
           K DL + R VPTEDAKEFA+ E LFF+ETSALEATNVE+AF T+LTEIY +++KK+L A 
Sbjct: 131 KCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAA- 190

Query: 189 DETDSGGSSSLLKGTKIVVPG--QEPQAASSGCCRS 223
           DE+   G+S+ L G KI++PG  QE  A  + CC++
Sbjct: 191 DESQGNGNSASLSGQKIIIPGPAQEIPAKRNMCCQA 225

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BLAST of IVF0022165 vs. ExPASy Swiss-Prot
Match: Q9SMQ6 (Ras-related protein RABA4b OS=Arabidopsis thaliana OX=3702 GN=RABA4B PE=1 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 6.0e-83
Identity = 157/214 (73.36%), Postives = 185/214 (86.45%), Query Frame = 0


Query: 11  KIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWD 70
           K+DYVFKVVLIGDSAVGKSQLL+RFAR+EFS+DSKATIGVEFQT+TL+I+QK+IKAQIWD
Sbjct: 13  KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72

Query: 71  TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNKS 130
           TAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+HI RWLEELR HADKNIVI+LIGNKS
Sbjct: 73  TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132

Query: 131 DLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISKKALVANDE 190
           DL   R VPTEDAKEFA+ E LFF+ETSAL ATNVE +FNT++T+IY  ++KK L +  +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGD 192

Query: 191 TDSGGSSSLLKGTKIVVP--GQEPQAASSGCCRS 223
           +++ GS   L G KI++P  GQE  A +S CC S
Sbjct: 193 SNNPGS---LAGKKILIPGSGQEIPAKTSTCCTS 223

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BLAST of IVF0022165 vs. ExPASy TrEMBL
Match: A0A1S3CFD0 (ras-related protein RABA4c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500306 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 3.9e-117
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 223
           SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS
Sbjct: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

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BLAST of IVF0022165 vs. ExPASy TrEMBL
Match: A0A0A0LEW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G698470 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.5e-116
Identity = 219/222 (98.65%), Postives = 221/222 (99.55%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELRGHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENL FMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 223
           SKKAL+ANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS
Sbjct: 181 SKKALIANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of IVF0022165 vs. ExPASy TrEMBL
Match: A0A6J1GBR1 (ras-related protein RABA4c-like OS=Cucurbita moschata OX=3662 GN=LOC111452722 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112
Identity = 212/222 (95.50%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 223
           S+KAL+AN+ETDSGG+SSLLKGTKIVVPGQEPQ+A+SGCCRS
Sbjct: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 222

[Close]

BLAST of IVF0022165 vs. ExPASy TrEMBL
Match: A0A6J1KGX4 (ras-related protein RABA4c-like OS=Cucurbita maxima OX=3661 GN=LOC111493112 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.9e-112
Identity = 212/222 (95.50%), Postives = 217/222 (97.75%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHI RWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHITRWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 223
           S+KAL+AN+ETDSGGSSSLLKGTKIVVPGQEPQ A+SGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQPATSGCCRS 222

[Close]

BLAST of IVF0022165 vs. ExPASy TrEMBL
Match: A0A5A7TZE1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00330 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.2e-111
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 11  KIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWD 70
           KIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWD
Sbjct: 285 KIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWD 344

Query: 71  TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNKS 130
           TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNKS
Sbjct: 345 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNKS 404

Query: 131 DLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISKKALVANDE 190
           DLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISKKALVANDE
Sbjct: 405 DLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISKKALVANDE 464

Query: 191 TDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 223
           TDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS
Sbjct: 465 TDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 496

[Close]

BLAST of IVF0022165 vs. NCBI nr
Match: XP_008461787.1 (PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo])

HSP 1 Score: 432 bits (1110), Expect = 2.19e-152
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222
           SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS
Sbjct: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of IVF0022165 vs. NCBI nr
Match: XP_004149604.1 (ras-related protein RABA4c isoform X1 [Cucumis sativus] >KGN58606.1 hypothetical protein Csa_002054 [Cucumis sativus])

HSP 1 Score: 427 bits (1098), Expect = 1.48e-150
Identity = 219/222 (98.65%), Postives = 221/222 (99.55%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELRGHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENL FMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222
           SKKAL+ANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS
Sbjct: 181 SKKALIANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of IVF0022165 vs. NCBI nr
Match: XP_023525670.1 (ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 417 bits (1071), Expect = 1.94e-146
Identity = 212/222 (95.50%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEF+QMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222
           S+KAL+AN+ETDSGGSSSLLKGTKIVVPGQEPQ+A+SGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222

[Close]

BLAST of IVF0022165 vs. NCBI nr
Match: XP_022949337.1 (ras-related protein RABA4c-like [Cucurbita moschata] >KAG6606869.1 Ras-related protein RABA4c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036575.1 Ras-related protein RABA4c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 417 bits (1071), Expect = 1.94e-146
Identity = 212/222 (95.50%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222
           S+KAL+AN+ETDSGG+SSLLKGTKIVVPGQEPQ+A+SGCCRS
Sbjct: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 222

[Close]

BLAST of IVF0022165 vs. NCBI nr
Match: XP_022998498.1 (ras-related protein RABA4c-like [Cucurbita maxima])

HSP 1 Score: 416 bits (1068), Expect = 5.55e-146
Identity = 212/222 (95.50%), Postives = 217/222 (97.75%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHI RWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHITRWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222
           S+KAL+AN+ETDSGGSSSLLKGTKIVVPGQEPQ A+SGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQPATSGCCRS 222

[Close]

BLAST of IVF0022165 vs. TAIR 10
Match: AT5G47960.1 (RAB GTPase homolog A4C )

HSP 1 Score: 366.3 bits (939), Expect = 1.7e-101
Identity = 181/220 (82.27%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
           MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           +K IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK+DLG+LR VPTEDAKEFAQ ENLFFMETSAL++ NVE +F T+LTEIYR++
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCC 221
           SKK LVAN+E +SGG SSLL+GTKIVV G+E ++   GCC
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCC 220

[Close]

BLAST of IVF0022165 vs. TAIR 10
Match: AT3G12160.1 (RAB GTPase homolog A4D )

HSP 1 Score: 358.6 bits (919), Expect = 3.6e-99
Identity = 180/220 (81.82%), Postives = 200/220 (90.91%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60
           MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RFARNEFS+DSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
            K +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDH+A+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180
           IVIMLIGNK DLGSLR VPTEDA+EFAQ ENLFFMETSALEATNVE AF TILTEIYR+I
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCC 221
           SKK+L A+D+ D+ G+SSLLKGT+I++P ++      GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of IVF0022165 vs. TAIR 10
Match: AT4G39990.1 (RAB GTPase homolog A4B )

HSP 1 Score: 308.5 bits (789), Expect = 4.3e-84
Identity = 157/214 (73.36%), Postives = 185/214 (86.45%), Query Frame = 0


Query: 11  KIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWD 70
           K+DYVFKVVLIGDSAVGKSQLL+RFAR+EFS+DSKATIGVEFQT+TL+I+QK+IKAQIWD
Sbjct: 13  KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72

Query: 71  TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNKS 130
           TAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+HI RWLEELR HADKNIVI+LIGNKS
Sbjct: 73  TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132

Query: 131 DLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISKKALVANDE 190
           DL   R VPTEDAKEFA+ E LFF+ETSAL ATNVE +FNT++T+IY  ++KK L +  +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGD 192

Query: 191 TDSGGSSSLLKGTKIVVP--GQEPQAASSGCCRS 223
           +++ GS   L G KI++P  GQE  A +S CC S
Sbjct: 193 SNNPGS---LAGKKILIPGSGQEIPAKTSTCCTS 223

[Close]

BLAST of IVF0022165 vs. TAIR 10
Match: AT5G65270.1 (RAB GTPase homolog A4A )

HSP 1 Score: 305.1 bits (780), Expect = 4.7e-83
Identity = 155/217 (71.43%), Postives = 185/217 (85.25%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQI 68
           +QKIDYVFKVVLIGDSAVGKSQ+L+R+AR+EFSLDSKATIGVEFQT+TL ID K++KAQI
Sbjct: 11  SQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQI 70

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGN 128
           WDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDHI RWLEELR HADKNIVI+LIGN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGN 130

Query: 129 KSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISKKALVAN 188
           KSDL   R +PTEDAKEFA+ E LFF+ETSA  ATNVE+AF+T+LTEI+ +++KK+L A+
Sbjct: 131 KSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAAS 190

Query: 189 DETDSGGSSSLLKGTKIVV---PGQEPQAASSGCCRS 223
           ++ ++G   S L G KI +   PGQ     S+ CC S
Sbjct: 191 EDQENGNPGS-LAGKKIDIVPGPGQVIPNKSNMCCNS 226

[Close]

BLAST of IVF0022165 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 266.5 bits (680), Expect = 1.9e-71
Identity = 132/208 (63.46%), Postives = 164/208 (78.85%), Query Frame = 0


Query: 13  DYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWDTA 72
           DY+FKVVLIGDS VGKS LLSRF +NEF+L+SK+TIGVEF T+TL +D K +KAQIWDTA
Sbjct: 11  DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTA 70

Query: 73  GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNKSDL 132
           GQERYRA+TSAYYRGAVGA+LVYD+T+R +F+++ RWL+EL+ H D NIV+ML+GNKSDL
Sbjct: 71  GQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDL 130

Query: 133 GSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISKKALVANDETD 192
             L  VPTED K +A+ E+L FMETSALEATNVE AF  +LT+IYR+ SKK + A ++  
Sbjct: 131 RHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGED-- 190

Query: 193 SGGSSSLLKGTKIVVPGQEPQAASSGCC 221
             G++S+ KG KI V          GCC
Sbjct: 191 --GNASVPKGEKIEVKNDVSALKKLGCC 214

The following BLAST results are available for this feature:

BLAST of IVF0022165 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FE79	2.4e-100	82.27	Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1	[more]
P25766	1.0e-98	85.05	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 S...	[more]
Q9LH50	5.1e-98	81.82	Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1	[more]
Q40191	1.3e-85	75.00	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
Q9SMQ6	6.0e-83	73.36	Ras-related protein RABA4b OS=Arabidopsis thaliana OX=3702 GN=RABA4B PE=1 SV=1	[more]

BLAST of IVF0022165 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CFD0	3.9e-117	100.00	ras-related protein RABA4c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500306 PE...	[more]
A0A0A0LEW7	9.5e-116	98.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G698470 PE=4 SV=1	[more]
A0A6J1GBR1	1.3e-112	95.50	ras-related protein RABA4c-like OS=Cucurbita moschata OX=3662 GN=LOC111452722 PE...	[more]
A0A6J1KGX4	2.9e-112	95.50	ras-related protein RABA4c-like OS=Cucurbita maxima OX=3661 GN=LOC111493112 PE=4...	[more]
A0A5A7TZE1	3.2e-111	100.00	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of IVF0022165 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461787.1	2.19e-152	100.00	PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo]	[more]
XP_004149604.1	1.48e-150	98.65	ras-related protein RABA4c isoform X1 [Cucumis sativus] >KGN58606.1 hypothetical...	[more]
XP_023525670.1	1.94e-146	95.50	ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949337.1	1.94e-146	95.50	ras-related protein RABA4c-like [Cucurbita moschata] >KAG6606869.1 Ras-related p...	[more]
XP_022998498.1	5.55e-146	95.50	ras-related protein RABA4c-like [Cucurbita maxima]	[more]

BLAST of IVF0022165 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47960.1	1.7e-101	82.27	RAB GTPase homolog A4C	[more]
AT3G12160.1	3.6e-99	81.82	RAB GTPase homolog A4D	[more]
AT4G39990.1	4.3e-84	73.36	RAB GTPase homolog A4B	[more]
AT5G65270.1	4.7e-83	71.43	RAB GTPase homolog A4A	[more]
AT1G16920.1	1.9e-71	63.46	RAB GTPase homolog A1B	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 39..55 score: 34.83 coord: 119..132 score: 51.17 coord: 16..37 score: 52.33 coord: 57..79 score: 51.95 coord: 154..176 score: 43.38
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..215 e-value: 3.2E-5 score: 24.9
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..179 e-value: 1.4E-104 score: 363.4
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 e-value: 0.0078 score: -2.9
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..179 e-value: 2.1E-26 score: 103.7
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 1..221
None	No IPR available	PANTHER	PTHR47978:SF13	RAS-RELATED PROTEIN RABA4C	coord: 1..221
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..220 score: 34.9678
None	No IPR available	PROSITE	PS51420	RHO	coord: 9..187 score: 9.079401
None	No IPR available	CDD	cd01868	Rab11_like	coord: 13..177 e-value: 2.27359E-125 score: 349.551
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..175 e-value: 5.8E-10 score: 8.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..177 e-value: 1.4E-60 score: 203.6
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 10..222 score: 16.346403
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 8..220 e-value: 7.8E-70 score: 236.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..181
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..172 e-value: 6.1E-36 score: 121.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0022165.1	IVF0022165.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding