IVF0022163 (gene) Melon (IVF77) v1

Overview
NameIVF0022163
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr09: 17478533 .. 17478742 (-)
RNA-Seq ExpressionIVF0022163
SyntenyIVF0022163
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTGGTTGAAGGGATGGCGCCAATGGTGGCGGAGGCGAGGGTATGCGAATCTCCGAGCCACAATTTCAAGGGTCTATGCTTTAGTGACACAAATTGTGGGAATATCTGCAAGACAGAGGGGTTTAGCGGTGGCCTTTGCAGGGGATTCCGCCGTCGCTGCTTTTGCACAAAGCACTGTGTTTGAAATCTCTCCGATAACCAACTAA

mRNA sequence

ATGTTGTGGTTGAAGGGATGGCGCCAATGGTGGCGGAGGCGAGGGTATGCGAATCTCCGAGCCACAATTTCAAGGGTCTATGCTTTAGTGACACAAATTGTGGGAATATCTGCAAGACAGAGGGGTTTAGCGGTGGCCTTTGCAGGGGATTCCGCCGTCGCTGCTTTTGCACAAAGCACTGTGTTTGAAATCTCTCCGATAACCAACTAA

Coding sequence (CDS)

ATGTTGTGGTTGAAGGGATGGCGCCAATGGTGGCGGAGGCGAGGGTATGCGAATCTCCGAGCCACAATTTCAAGGGTCTATGCTTTAGTGACACAAATTGTGGGAATATCTGCAAGACAGAGGGGTTTAGCGGTGGCCTTTGCAGGGGATTCCGCCGTCGCTGCTTTTGCACAAAGCACTGTGTTTGAAATCTCTCCGATAACCAACTAA

Protein sequence

MLWLKGWRQWWRRRGYANLRATISRVYALVTQIVGISARQRGLAVAFAGDSAVAAFAQSTVFEISPITN
Homology
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BLAST of IVF0022163 vs. ExPASy TrEMBL
Match: A0A0A0KLL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G114560 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.5e-24
Identity = 62/66 (93.94%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 4  LKGWRQWWRRRGYANLRATISRVYALVTQIVGISARQRGLAVAFAGDSAVAAFAQSTVFE 63
          ++GWRQWWRRRGYANLRATISRV ALVTQIVGISARQRGLAVAFAGD AVAAFAQSTVFE
Sbjct: 8  VQGWRQWWRRRGYANLRATISRVCALVTQIVGISARQRGLAVAFAGDFAVAAFAQSTVFE 67

Query: 64 ISPITN 70
          ISPITN
Sbjct: 68 ISPITN 73

The following BLAST results are available for this feature:
BLAST of IVF0022163 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0022163 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLL14.5e-2493.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G114560 PE=4 SV=1[more]
BLAST of IVF0022163 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of IVF0022163 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0022163.1IVF0022163.1mRNA