IVF0022137 (gene) Melon (IVF77) v1

Overview


Name	IVF0022137
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like
Location	chr11: 11514683 .. 11516908 (-)
RNA-Seq Expression	IVF0022137
Synteny	IVF0022137

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCTGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACCTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCCTACTTTCAGGTTCGTTGCTTAATGCTTTTGCAACCGTTTTAAGTGCGAAAAGCTTCTGAATCTAGAGCTTTTTGGGTTTTTTTTTTGTTCTCACTAAAAGTAGAGCAACGAAAACAGTGTTCAATCTTCATCTTTATTTCTCTCTTCAGCGTTTTAGTCGTAAAACGTTTCAGTAAAATAACGTTATCTATTTTGCTTGAAGGTGTGCGCCTGTGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTAATGACTTCCATGCTCTCTATCTCGCGCCATAGCTGCGGTTGGCTCCCCGAAGGTGCATAACTGATAATTTAATTCTTTACTTTCTTGACCTGTTGTGAGCTACATCGAAAGAGAGGACAATATGATGTATTTGTATAGTTTAGAATTTAGACCATATCCATAATTTCAGAATGACTTCTTCCGTGGACAAGAAAGAGTGGATAATTTTCTGGAAGTTGATTTTCTTTTTGCATTTGTTTTTCGTTGGATGAATTTTAGCTTTATAATTTTTTCATGAATCAGGAAAAATAGAGTTTGAGTGGGACTAATAATCAACTATATTTTGAAATAGTGATATCTATATTTAGGTTTAGGGGTCATATTAGCCACAGTGATCTGATGCTTTTGGCGGATGAAATATCTATGCTTGTAATCTATGATTTGGGTAGTTAATGTGTTTGAATCATAAGAAACTACACCATGAAAAGCTTTCTTTTGGCTTAATTTAAGTACTGATGTGTATAAATATTTCAGTAACTTATAAACTTTCATAAGCATTTTATGTGTACATAAATTTGAATGTATTGCGCTAGTTTTGTGATCCCTTTGTTAGACCCCAGTCCTCCAAACTTATAAAAGAAAGGGCAGGAAGGGAAATTCATAGAATAATTCAAAGGGAGAGCTGATGGGAGAGGAAAGAAGCACCGGACAGCCCGCCTTGTATGTGGGTATAATTATAAATAGGGAATGTATTGGGATTGAGGGATTAGGTCAGGATTTTGGTGAAAGTTGCTGTAGGCTTTTTAGGAGAGGTTTCCAGCCTTCTCGAAGGAGCTGGCTTTATTATTTCTTATTACTTTGTTGCATTTACTTTCTGTTCATCATGTGATCACAGTTGGTTTGTTGAACATTTTGGTTATTACATCAATATTACAATAGAGTACTGTCTCTGTTTTGTCATTGTTGGGATTTTCTAAGTTTTAGGTTGAGAATCTTAACAAATTGGTATTAGAGCTTCAACATCCTGGGGCAACACGATCTATAGATAAAAAAACAACTCATCGAAAGAATGAAGTCTAGTGAAAGGGAAATTATGGATTCAAGGAAATCATACTCAGGCTGAAGAAGAGTGTGGATCAACTAGCGAAAGACATGAAAGAGAATACGGTTAGTCGGAGAAAAGAGGAATCAGGGACGTCCAATGTTTCAGTGCTCAAAATGAAAGGAAAAATGGAGGATATGGAAGTTGGTTCGACAGTCGAACATGGAACAATTGACAAGAGCAAGTATAAGATGTTAGAAATGCCGATCTTCAATGGTGTGAATCCGGAATCGTAGGCATATAGGGCTAATCATTTTTTTGAGATAAATGACTTAGCGGATAACGAGAAGGTCAAGGTAGTGGTGATTAGCTTTGCTCAAGATGAAATAAATTGGTTTCACTCGAGTAACGATCGAAAGAAGGTAACATCATGGGAAGATTTGAAACAAAGGATGTTCAATCACTTTCAACCTACTGGCAAAGGGAGCATTGGGGCTTGGTTAATCAGGATCATGCAAGATTGCCGTATACAAATTAAAAACATTTCTGAACTATTCTGTACCCTTACCAAGTATGGTGGAGAGTGGTCTAATGGATGCTTTTGTGACAGCAAACGGAAGTGGTAAGTCTTCATGTGAAGAACTTGGATGAGTGTATGAAGGAAGCCCAACTGGTCAATGATCGTAATGTTCCCCTAAATTGGCCTTGAGTGAATGGGGAGCCAATAGACGATCAATTATTTTACAATATAGTATAAAGGGAAGTGAGGAAAGGCATGTGTGAAGGAGAATAA

mRNA sequence

ATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCTGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACCTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCCTACTTTCAGGTGTGCGCCTGTGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTAATGACTTCCATGCTCTCTATCTCGCGCCATAGCTGCGGTTGGCTCCCCGAAGAATAA

Coding sequence (CDS)

ATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCTGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACCTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCCTACTTTCAGGTGTGCGCCTGTGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTAATGACTTCCATGCTCTCTATCTCGCGCCATAGCTGCGGTTGGCTCCCCGAAGAATAA

Protein sequence

MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEE

Homology

[Close]

BLAST of IVF0022137 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.2e-06
Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 5  GARSAFRSFSGSARRAAAHIGSQPKPSSTSP--FR-MATNKPLSHPTFRCAPVMSFCLES 64
          GARS  R  + S+R AAA  G     + ++P  FR  A   PL  P  R    +SFC+ES
Sbjct: 9  GARSMLR--AASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSP-LRNPVELSFCVES 68

Query: 65 MMPFHSVSSSALMTSMLSISRHSCGWLPE 91
          ++P+HS ++SALMTS LSIS  + GWL +
Sbjct: 69 LLPYHSATASALMTSKLSISGQTYGWLSD 94

[Close]

BLAST of IVF0022137 vs. ExPASy TrEMBL
Match: A0A5A7UI59 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00160 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 91
          SMMPFHSVSSSALMTSMLSISRHSCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90

[Close]

BLAST of IVF0022137 vs. ExPASy TrEMBL
Match: A0A5D3BHH0 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00120 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 91
          SMMPFHSVSSSALMTSMLSISRHSCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90

[Close]

BLAST of IVF0022137 vs. ExPASy TrEMBL
Match: A0A1S4E0Y3 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496017 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 91
          SMMPFHSVSSSALMTSMLSISRHSCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90

[Close]

BLAST of IVF0022137 vs. ExPASy TrEMBL
Match: A0A1S4E1L9 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496017 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 91
          SMMPFHSVSSSALMTSMLSISRHSCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90

[Close]

BLAST of IVF0022137 vs. ExPASy TrEMBL
Match: A0A1S4E0X5 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496017 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 91
          SMMPFHSVSSSALMTSMLSISRHSCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90

[Close]

BLAST of IVF0022137 vs. NCBI nr
Match: XP_016901881.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucumis melo])

HSP 1 Score: 173 bits (438), Expect = 3.70e-54
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90
          SMMPFHSVSSSALMTSMLSISRHSCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90

[Close]

BLAST of IVF0022137 vs. NCBI nr
Match: XP_016901879.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 173 bits (438), Expect = 4.18e-54
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90
          SMMPFHSVSSSALMTSMLSISRHSCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90

[Close]

BLAST of IVF0022137 vs. NCBI nr
Match: XP_016901880.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 173 bits (438), Expect = 4.18e-54
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90
          SMMPFHSVSSSALMTSMLSISRHSCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90

[Close]

BLAST of IVF0022137 vs. NCBI nr
Match: TYJ97628.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa])

HSP 1 Score: 173 bits (438), Expect = 8.86e-53
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90
          SMMPFHSVSSSALMTSMLSISRHSCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90

[Close]

BLAST of IVF0022137 vs. NCBI nr
Match: KAA0053240.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa] >TYJ97635.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa])

HSP 1 Score: 167 bits (424), Expect = 5.06e-52
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKP SH TFRCAPVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90
          SMMPFHSVSSSALMTSMLSISRHSCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90

[Close]

BLAST of IVF0022137 vs. TAIR 10
Match: AT1G28395.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 8.3e-10
Identity = 36/89 (40.45%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 6  ARSAFRSFSGSARRAAAHIGSQPKP---SSTSPFRMATNKPLSHPTFRCAPVMSFCLESM 65
          ARS FRS +  A   A    + PKP   S+ + FRM    PL++  FR    +S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWLPEE 92
          +P+H+ ++SAL+ SMLS+SR   GW+ ++
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDD 90

[Close]

BLAST of IVF0022137 vs. TAIR 10
Match: AT1G28395.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1). )

HSP 1 Score: 60.5 bits (145), Expect = 8.3e-10
Identity = 36/89 (40.45%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 6  ARSAFRSFSGSARRAAAHIGSQPKP---SSTSPFRMATNKPLSHPTFRCAPVMSFCLESM 65
          ARS FRS +  A   A    + PKP   S+ + FRM    PL++  FR    +S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWLPEE 92
          +P+H+ ++SAL+ SMLS+SR   GW+ ++
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDD 90

[Close]

BLAST of IVF0022137 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 2.4e-09
Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 6  ARSAFRSFSGSARRAAAHIGSQPKP---SSTSPFRMATNKPLSHPTFRCAPVMSFCLESM 65
          ARS FRS +  A   A    + PKP   S+ + FRM    PL++  FR    +S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWL 89
          +P+H+ ++SAL+ SMLS+SR   GW+
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWI 87

[Close]

BLAST of IVF0022137 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 2.4e-09
Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 6  ARSAFRSFSGSARRAAAHIGSQPKP---SSTSPFRMATNKPLSHPTFRCAPVMSFCLESM 65
          ARS FRS +  A   A    + PKP   S+ + FRM    PL++  FR    +S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWL 89
          +P+H+ ++SAL+ SMLS+SR   GW+
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWI 87

[Close]

BLAST of IVF0022137 vs. TAIR 10
Match: AT1G28395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 2.4e-09
Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 6  ARSAFRSFSGSARRAAAHIGSQPKP---SSTSPFRMATNKPLSHPTFRCAPVMSFCLESM 65
          ARS FRS +  A   A    + PKP   S+ + FRM    PL++  FR    +S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWL 89
          +P+H+ ++SAL+ SMLS+SR   GW+
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWI 87

The following BLAST results are available for this feature:

BLAST of IVF0022137 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZJ3	3.2e-06	44.94	Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]

BLAST of IVF0022137 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UI59	1.6e-40	100.00	Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5D3BHH0	1.6e-40	100.00	Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S4E0Y3	1.6e-40	100.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
A0A1S4E1L9	1.6e-40	100.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ...	[more]
A0A1S4E0X5	1.6e-40	100.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 ...	[more]

BLAST of IVF0022137 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901881.1	3.70e-54	100.00	PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like ...	[more]
XP_016901879.1	4.18e-54	100.00	PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like ...	[more]
XP_016901880.1	4.18e-54	100.00	PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like ...	[more]
TYJ97628.1	8.86e-53	100.00	protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]	[more]
KAA0053240.1	5.06e-52	97.78	protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa] >TYJ97635.1 protei...	[more]

BLAST of IVF0022137 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28395.4	8.3e-10	40.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.5	8.3e-10	40.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.2	2.4e-09	41.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.1	2.4e-09	41.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.3	2.4e-09	41.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..39
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 3..90
IPR033251	Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial	PANTHER	PTHR33156:SF48	PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC/MITOCHONDRIAL	coord: 3..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0022137.1	IVF0022137.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000741	karyogamy