IVF0022123 (gene) Melon (IVF77) v1

Overview
NameIVF0022123
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit H protein
Locationchr11: 26787923 .. 26788102 (+)
RNA-Seq ExpressionIVF0022123
SyntenyIVF0022123
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACTCGAACCTAGAGCTACTTGGTTCTCCCCAAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAACACTGTTTCGATGCGGGCCGCGAGAGCGGTACCAAATCGAGTCAAACTCTGAAGATTAGATATGATCTCAAAATAATAGAGGTCAAGGTCGACCAATGA

mRNA sequence

ATGCCACTCGAACCTAGAGCTACTTGGTTCTCCCCAAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAACACTGTTTCGATGCGGGCCGCGAGAGCGGTACCAAATCGAGTCAAACTCTGAAGATTAGATATGATCTCAAAATAATAGAGGTCAAGGTCGACCAATGA

Coding sequence (CDS)

ATGCCACTCGAACCTAGAGCTACTTGGTTCTCCCCAAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAACACTGTTTCGATGCGGGCCGCGAGAGCGGTACCAAATCGAGTCAAACTCTGAAGATTAGATATGATCTCAAAATAATAGAGGTCAAGGTCGACCAATGA

Protein sequence

MPLEPRATWFSPKCVEAQQLTGHLGVKHCFDAGRESGTKSSQTLKIRYDLKIIEVKVDQ
Homology
[Close]
BLAST of IVF0022123 vs. ExPASy TrEMBL
Match: A0A6J5V4Y5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS15015 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.2e-21
Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1  MPLEPRATWFSPKCVEAQQLTGHLGVKHCFDAGRESGTKSSQTLKIRYDLKIIEVKVDQ 60
          MPLEPRA+WFSPKCVEAQQLTGHLGVKHCF AGRESGTKS QTL  RYDLKI  VKV Q
Sbjct: 1  MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYDLKITGVKVGQ 59

[Close]
BLAST of IVF0022123 vs. ExPASy TrEMBL
Match: A0A3P6DE90 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRASC138T45527Z PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.2e-21
Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1  MPLEPRATWFSPKCVEAQQLTGHLGVKHCFDAGRESGTKSSQTLKIRYDLKIIEVKVDQ 60
          MPLEPRA+WFSPKCVEAQQLTGHLGVKHCF AGRESGTKS QTL  RYDLKI  VKV Q
Sbjct: 1  MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYDLKITGVKVGQ 59

[Close]
BLAST of IVF0022123 vs. ExPASy TrEMBL
Match: A9PE47 (Uncharacterized protein OS=Populus trichocarpa OX=3694 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.2e-21
Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1  MPLEPRATWFSPKCVEAQQLTGHLGVKHCFDAGRESGTKSSQTLKIRYDLKIIEVKVDQ 60
          MPLEPRA+WFSPKCVEAQQLTGHLGVKHCF AGRESGTKS QTL  RYDLKI  VKV Q
Sbjct: 1  MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYDLKITGVKVGQ 59

[Close]
BLAST of IVF0022123 vs. ExPASy TrEMBL
Match: A0A4U5Q539 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000138580 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.2e-21
Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1  MPLEPRATWFSPKCVEAQQLTGHLGVKHCFDAGRESGTKSSQTLKIRYDLKIIEVKVDQ 60
          MPLEPRA+WFSPKCVEAQQLTGHLGVKHCF AGRESGTKS QTL  RYDLKI  VKV Q
Sbjct: 1  MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYDLKITGVKVGQ 59

[Close]
BLAST of IVF0022123 vs. ExPASy TrEMBL
Match: W9RXL8 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018824 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.2e-21
Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1  MPLEPRATWFSPKCVEAQQLTGHLGVKHCFDAGRESGTKSSQTLKIRYDLKIIEVKVDQ 60
          MPLEPRA+WFSPKCVEAQQLTGHLGVKHCF AGRESGTKS QTL  RYDLKI  VKV Q
Sbjct: 1  MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYDLKITGVKVGQ 59

[Close]
BLAST of IVF0022123 vs. NCBI nr
Match: QHO49297.1 (uncharacterized protein DS421_1g12790 [Arachis hypogaea])

HSP 1 Score: 109 bits (272), Expect = 8.16e-30
Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1  MPLEPRATWFSPKCVEAQQLTGHLGVKHCFDAGRESGTKSSQTLKIRYDLKIIEVKVDQ 59
          MPLEPRA+WFSPKCVEAQQLTGHLGVKHCF AGRESGTKS QTL  RYDLKI  VKV Q
Sbjct: 1  MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYDLKITRVKVGQ 59

[Close]
BLAST of IVF0022123 vs. NCBI nr
Match: ABK94650.1 (unknown [Populus trichocarpa] >EXC01913.1 hypothetical protein L484_018824 [Morus notabilis] >KAF8091072.1 hypothetical protein N665_0454s0013 [Sinapis alba] >KAG5222281.1 retrotransposon protein [Salix suchowensis] >KAG6621044.1 hypothetical protein I3842_Q035800 [Carya illinoinensis] >CAB4265713.1 unnamed protein product [Prunus armeniaca] >VDD22534.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 108 bits (270), Expect = 1.65e-29
Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1  MPLEPRATWFSPKCVEAQQLTGHLGVKHCFDAGRESGTKSSQTLKIRYDLKIIEVKVDQ 59
          MPLEPRA+WFSPKCVEAQQLTGHLGVKHCF AGRESGTKS QTL  RYDLKI  VKV Q
Sbjct: 1  MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYDLKITGVKVGQ 59

[Close]
BLAST of IVF0022123 vs. NCBI nr
Match: KAG6618060.1 (hypothetical protein I3842_Q128500 [Carya illinoinensis] >KAG6621061.1 hypothetical protein I3842_Q037500 [Carya illinoinensis])

HSP 1 Score: 108 bits (270), Expect = 2.27e-29
Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1  MPLEPRATWFSPKCVEAQQLTGHLGVKHCFDAGRESGTKSSQTLKIRYDLKIIEVKVDQ 59
          MPLEPRA+WFSPKCVEAQQLTGHLGVKHCF AGRESGTKS QTL  RYDLKI  VKV Q
Sbjct: 1  MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYDLKITGVKVGQ 59

[Close]
BLAST of IVF0022123 vs. NCBI nr
Match: KAF8013552.1 (hypothetical protein BT93_I1410 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 108 bits (269), Expect = 2.34e-29
Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 1  MPLEPRATWFSPKCVEAQQLTGHLGVKHCFDAGRESGTKSSQTLKIRYDLKIIEVKVDQ 59
          MPLEPRA+WFSPKCVEAQQLTGHLGVKHCF AGRESGT+S QTL  RYDL+II VKV Q
Sbjct: 1  MPLEPRASWFSPKCVEAQQLTGHLGVKHCFSAGRESGTESRQTLNTRYDLQIIGVKVSQ 59

[Close]
BLAST of IVF0022123 vs. NCBI nr
Match: KAG4178800.1 (hypothetical protein ERO13_A10G065960v2 [Gossypium hirsutum])

HSP 1 Score: 107 bits (267), Expect = 4.73e-29
Identity = 51/59 (86.44%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 1  MPLEPRATWFSPKCVEAQQLTGHLGVKHCFDAGRESGTKSSQTLKIRYDLKIIEVKVDQ 59
          MPLEPRA+WFSPKCVEAQQLTGHLGVKH F AGRESGTKS QTL  RYDLKII V+VDQ
Sbjct: 1  MPLEPRASWFSPKCVEAQQLTGHLGVKHYFGAGRESGTKSRQTLNTRYDLKIIGVEVDQ 59

The following BLAST results are available for this feature:
BLAST of IVF0022123 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0022123 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J5V4Y55.2e-2186.44Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS15015 PE=4 S... [more]
A0A3P6DE905.2e-2186.44Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRASC138T45527Z PE=4 S... [more]
A9PE475.2e-2186.44Uncharacterized protein OS=Populus trichocarpa OX=3694 PE=2 SV=1[more]
A0A4U5Q5395.2e-2186.44Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000138580 PE=4 SV=1[more]
W9RXL85.2e-2186.44Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018824 PE=4 SV=1[more]
BLAST of IVF0022123 vs. NCBI nr
Match NameE-valueIdentityDescription
QHO49297.18.16e-3086.44uncharacterized protein DS421_1g12790 [Arachis hypogaea][more]
ABK94650.11.65e-2986.44unknown [Populus trichocarpa] >EXC01913.1 hypothetical protein L484_018824 [Moru... [more]
KAG6618060.12.27e-2986.44hypothetical protein I3842_Q128500 [Carya illinoinensis] >KAG6621061.1 hypotheti... [more]
KAF8013552.12.34e-2984.75hypothetical protein BT93_I1410 [Corymbia citriodora subsp. variegata][more]
KAG4178800.14.73e-2986.44hypothetical protein ERO13_A10G065960v2 [Gossypium hirsutum][more]
BLAST of IVF0022123 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0022123.1IVF0022123.1mRNA