IVF0022091 (gene) Melon (IVF77) v1

Overview
NameIVF0022091
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr09: 16909584 .. 16910064 (+)
RNA-Seq ExpressionIVF0022091
SyntenyIVF0022091
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCAACTTCACACCAAACCGCTTTAGATATGAGGGCAGTTTCTTTCTTGATCCCAACAATCAGCCAAAGAAACTATGGACTGAGCTGTTTCTGCACATCATCAAATTGTTTACCAGTTTGCATTAGAAGCCCTCAAGCAACAGCCATTAGCTCTCAAAATCTTGGCAGGACAATTGTTGGGCTTAGTTTTCAAGCAGTTTAGCCTTGTACATTAGCTCACCAACTTCCTCTCCTCCACTTTTGATACTCCTTTTTGCTGCTGCTATTTTGATTAGCTTTGCTCTTTCATTTGCTGCTGTTTTGCTTCATATCTCCTTCCGAGAACTGCCCGTTTGCTCGAGAAGATTGGTGCGCTTTTTGCTGCAATTGGTGTGTGTATCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGATTTGTTGGGTAGCATGTGCCTTCTCCATCATTGTCTTTGCTTTATCATTTAAGTGA

mRNA sequence

ATGGCTTCAACTTCACACCAAACCGCTTTAGATATGAGGGCAGTTTCTTTCTTGATCCCAACAATCAGCCAAAGAAACTATGGACTGAGCTGTTTCTGCACATCATCAAATTGTTTACCAGTTTGCATTAGAAGCCCTCAAGCAACAGCCATTAGCTCTCAAAATCTTGGCAGGACAATTGTTGGGCTTAGTTTTCAAGCACTTTGCTCTTTCATTTGCTGCTGTTTTGCTTCATATCTCCTTCCGAGAACTGCCCGTTTGCTCGAGAAGATTGGTGCGCTTTTTGCTGCAATTGGTGTGTGTATCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGATTTGTTGGGTAGCATGTGCCTTCTCCATCATTGTCTTTGCTTTATCATTTAAGTGA

Coding sequence (CDS)

ATGGCTTCAACTTCACACCAAACCGCTTTAGATATGAGGGCAGTTTCTTTCTTGATCCCAACAATCAGCCAAAGAAACTATGGACTGAGCTGTTTCTGCACATCATCAAATTGTTTACCAGTTTGCATTAGAAGCCCTCAAGCAACAGCCATTAGCTCTCAAAATCTTGGCAGGACAATTGTTGGGCTTAGTTTTCAAGCACTTTGCTCTTTCATTTGCTGCTGTTTTGCTTCATATCTCCTTCCGAGAACTGCCCGTTTGCTCGAGAAGATTGGTGCGCTTTTTGCTGCAATTGGTGTGTGTATCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGATTTGTTGGGTAGCATGTGCCTTCTCCATCATTGTCTTTGCTTTATCATTTAAGTGA

Protein sequence

MASTSHQTALDMRAVSFLIPTISQRNYGLSCFCTSSNCLPVCIRSPQATAISSQNLGRTIVGLSFQALCSFICCCFASYLLPRTARLLEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK
Homology
BLAST of IVF0022091 vs. ExPASy TrEMBL
Match: A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.1e-37
Identity = 99/164 (60.37%), Postives = 108/164 (65.85%), Query Frame = 0

Query: 1   MASTSHQTALDMRAVSFLIPTISQRNYGLSCFCTSSNCLPVCIR---SPQATAISSQNLG 60
           MASTSHQT+LDM A S  I TISQRNYGL C CT SNCLPV IR   SPQATA SSQ LG
Sbjct: 1   MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLG 60

Query: 61  RTIVGLSFQALCS-----------------FICCCFASYLL-----------PRTARLLE 120
           + I+ LSFQA+ +                 F    F S+ +           PRTA L E
Sbjct: 61  KIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFE 120

Query: 121 KIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK 134
           K+GALF+A GVC IASFLLVHQNFAWICWVAC FSIIVFALSFK
Sbjct: 121 KVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164

BLAST of IVF0022091 vs. ExPASy TrEMBL
Match: A0A0A0KJN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 8.8e-16
Identity = 69/164 (42.07%), Postives = 90/164 (54.88%), Query Frame = 0

Query: 1   MASTSHQTALDMRAVSFLIPTISQRNYGLSCFCTSSNCLPVCI----RSPQATAISSQNL 60
           M S+S Q ++DM  +  LI +I++RN          N LP+CI     SP  ++ +  N+
Sbjct: 1   MESSSQQISIDMNHLYSLITSINERN-------PEINGLPICIIMQTASPANSSKTENNV 60

Query: 61  GRTIVGLSFQA-LCSFICCCFASYLL--------------------------PRTARLLE 120
           G TI+GL+FQA L  FI    +S  L                          PR A L E
Sbjct: 61  GTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFE 120

Query: 121 KIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK 134
           KIGAL AAIGVCI+AS LL+HQNFAWI W+AC FS++ F LSF+
Sbjct: 121 KIGALIAAIGVCILAS-LLIHQNFAWISWLACGFSLMAFLLSFR 156

BLAST of IVF0022091 vs. ExPASy TrEMBL
Match: A0A0A0KQ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 9.1e-13
Identity = 60/166 (36.14%), Postives = 88/166 (53.01%), Query Frame = 0

Query: 1   MAST-SHQTALDMRAVSFLIPTISQRNYGLSCFCT----SSNCLPVCIRSPQATAISSQN 60
           MA T  H+ +LDM  ++ LI  ++ RN G+S  CT    +S+CLP+ I+  + + ++S  
Sbjct: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISS-CTWGGAASDCLPIYIKMQRPSPVNSPQ 60

Query: 61  LGRTIVGLSFQALCSFICC------------CFASYLL----------------PRTARL 120
            G T + L+FQA+                   FA+ +L                P+TA+L
Sbjct: 61  FGNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQL 120

Query: 121 LEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK 134
           L+  GALFAAIG CII S LL++ NF WICW+A    +  F +SFK
Sbjct: 121 LQTFGALFAAIGTCIIGS-LLLYPNFTWICWLAAGLILPAFIISFK 164

BLAST of IVF0022091 vs. ExPASy TrEMBL
Match: A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.6e-12
Identity = 60/153 (39.22%), Postives = 79/153 (51.63%), Query Frame = 0

Query: 12  MRAVSFLIPTISQRNYGLSCFCTSSNCLPVCIR----SPQATAISSQNLGRTIVGLSFQA 71
           M  +   I  I++RN          N LP+CI     SP  ++ +  N+G+TI+GL+FQA
Sbjct: 1   MNELYSFITAINERN-------PEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQA 60

Query: 72  LCSF-----------------------ICCCFASYLL----PRTARLLEKIGALFAAIGV 131
           + +                            FA   L    PR A L EKIGAL AAIGV
Sbjct: 61  VLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAAIGV 120

Query: 132 CIIASFLLVHQNFAWICWVACAFSIIVFALSFK 134
           CI+AS LL+HQNFAWI W+A  FS++ F LSF+
Sbjct: 121 CIVAS-LLIHQNFAWISWLASGFSLMAFVLSFR 145

BLAST of IVF0022091 vs. ExPASy TrEMBL
Match: A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.6e-09
Identity = 57/164 (34.76%), Postives = 79/164 (48.17%), Query Frame = 0

Query: 1   MASTS-HQTALDMRAVSFLIPTISQRNYGLSCFCT----SSNCLPVCIRSPQATAISSQN 60
           MA T  H+ +LDM  +   I  ++ RN G+S  CT    +S+CLP+ I+  + + ++S  
Sbjct: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISS-CTWGTAASDCLPIYIKMQRPSPVNSPQ 60

Query: 61  LGRTIVGLSFQA-----------------------LCSFI---CCCFASYLLPRTARLLE 120
            G T V  +FQA                       L +F+   C        P+ A LL+
Sbjct: 61  FGNTFVSSNFQAILGLFLNLPPSPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQ 120

Query: 121 KIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK 134
             GAL AAIGVCI+ S LL H N  WI W+AC   +  F  SFK
Sbjct: 121 MFGALLAAIGVCIMGSPLL-HPNLTWIRWLACGLILPAFITSFK 162

BLAST of IVF0022091 vs. NCBI nr
Match: KGN49808.1 (hypothetical protein Csa_004650 [Cucumis sativus])

HSP 1 Score: 167 bits (424), Expect = 2.63e-50
Identity = 99/164 (60.37%), Postives = 108/164 (65.85%), Query Frame = 0

Query: 1   MASTSHQTALDMRAVSFLIPTISQRNYGLSCFCTSSNCLPVCIR---SPQATAISSQNLG 60
           MASTSHQT+LDM A S  I TISQRNYGL C CT SNCLPV IR   SPQATA SSQ LG
Sbjct: 1   MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLG 60

Query: 61  RTIVGLSFQALCS-----------------FICCCFASYLL-----------PRTARLLE 120
           + I+ LSFQA+ +                 F    F S+ +           PRTA L E
Sbjct: 61  KIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFE 120

Query: 121 KIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK 133
           K+GALF+A GVC IASFLLVHQNFAWICWVAC FSIIVFALSFK
Sbjct: 121 KVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164

BLAST of IVF0022091 vs. NCBI nr
Match: KGN49803.1 (hypothetical protein Csa_004681 [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 6.34e-22
Identity = 69/164 (42.07%), Postives = 91/164 (55.49%), Query Frame = 0

Query: 1   MASTSHQTALDMRAVSFLIPTISQRNYGLSCFCTSSNCLPVCI----RSPQATAISSQNL 60
           M S+S Q ++DM  +  LI +I++RN  +       N LP+CI     SP  ++ +  N+
Sbjct: 1   MESSSQQISIDMNHLYSLITSINERNPEI-------NGLPICIIMQTASPANSSKTENNV 60

Query: 61  GRTIVGLSFQA-LCSFICCCFASYLL--------------------------PRTARLLE 120
           G TI+GL+FQA L  FI    +S  L                          PR A L E
Sbjct: 61  GTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFE 120

Query: 121 KIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK 133
           KIGAL AAIGVCI+AS LL+HQNFAWI W+AC FS++ F LSF+
Sbjct: 121 KIGALIAAIGVCILAS-LLIHQNFAWISWLACGFSLMAFLLSFR 156

BLAST of IVF0022091 vs. NCBI nr
Match: KGN49806.1 (hypothetical protein Csa_004683 [Cucumis sativus])

HSP 1 Score: 85.5 bits (210), Expect = 6.02e-18
Identity = 60/166 (36.14%), Postives = 88/166 (53.01%), Query Frame = 0

Query: 1   MASTS-HQTALDMRAVSFLIPTISQRNYGLSCFCT----SSNCLPVCIRSPQATAISSQN 60
           MA T  H+ +LDM  ++ LI  ++ RN G+S  CT    +S+CLP+ I+  + + ++S  
Sbjct: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISS-CTWGGAASDCLPIYIKMQRPSPVNSPQ 60

Query: 61  LGRTIVGLSFQALCSFICCC------------FASYLL----------------PRTARL 120
            G T + L+FQA+                   FA+ +L                P+TA+L
Sbjct: 61  FGNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQL 120

Query: 121 LEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK 133
           L+  GALFAAIG CII S LL++ NF WICW+A    +  F +SFK
Sbjct: 121 LQTFGALFAAIGTCIIGS-LLLYPNFTWICWLAAGLILPAFIISFK 164

BLAST of IVF0022091 vs. NCBI nr
Match: KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 3.08e-17
Identity = 63/153 (41.18%), Postives = 81/153 (52.94%), Query Frame = 0

Query: 12  MRAVSFLIPTISQRNYGLSCFCTSSNCLPVCIR----SPQATAISSQNLGRTIVGLSFQA 71
           M  +   I  I++RN  +       N LP+CI     SP  ++ +  N+G+TI+GL+FQA
Sbjct: 1   MNELYSFITAINERNPEI-------NSLPICITMQRPSPANSSKTENNVGKTILGLTFQA 60

Query: 72  -LCSFI----------------------CCCFASYLL----PRTARLLEKIGALFAAIGV 131
            L  FI                         FA   L    PR A L EKIGAL AAIGV
Sbjct: 61  VLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAAIGV 120

Query: 132 CIIASFLLVHQNFAWICWVACAFSIIVFALSFK 133
           CI+AS LL+HQNFAWI W+A  FS++ F LSF+
Sbjct: 121 CIVAS-LLIHQNFAWISWLASGFSLMAFVLSFR 145

BLAST of IVF0022091 vs. NCBI nr
Match: KAG6579132.1 (hypothetical protein SDJN03_23580, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 80.1 bits (196), Expect = 3.53e-16
Identity = 55/131 (41.98%), Postives = 71/131 (54.20%), Query Frame = 0

Query: 32  FCTSSNCLPVCIRSPQATAISS--QNLGRTIVGLSFQALCS----------------FIC 91
           F T  +CLP+     Q         N+G+ I+GL+ QAL +                F  
Sbjct: 3   FSTPRDCLPIWRAREQRLEPDKGHSNVGKAIIGLTSQALLAMFISSPSSSPPLLRVLFGA 62

Query: 92  CCFASYLL-----------PRTARLLEKIGALFAAIGVCIIASFLLVHQNFAWICWVACA 133
             F S+LL           P+ ARL EK+GALFAAIGV IIASFLL+H+N+AWI  +AC 
Sbjct: 63  TMFISFLLSFAGIFLRNAFPKAARLFEKLGALFAAIGVSIIASFLLMHENYAWISGLACV 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KJP21.1e-3760.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1[more]
A0A0A0KJN88.8e-1642.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1[more]
A0A0A0KQ039.1e-1336.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1[more]
A0A5A7U7U12.6e-1239.22Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3BEH81.6e-0934.76Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... [more]
Match NameE-valueIdentityDescription
KGN49808.12.63e-5060.37hypothetical protein Csa_004650 [Cucumis sativus][more]
KGN49803.16.34e-2242.07hypothetical protein Csa_004681 [Cucumis sativus][more]
KGN49806.16.02e-1836.14hypothetical protein Csa_004683 [Cucumis sativus][more]
KAA0050246.13.08e-1741.18putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... [more]
KAG6579132.13.53e-1641.98hypothetical protein SDJN03_23580, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0022091.1IVF0022091.1mRNA