Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCAACTTCACACCAAACCGCTTTAGATATGAGGGCAGTTTCTTTCTTGATCCCAACAATCAGCCAAAGAAACTATGGACTGAGCTGTTTCTGCACATCATCAAATTGTTTACCAGTTTGCATTAGAAGCCCTCAAGCAACAGCCATTAGCTCTCAAAATCTTGGCAGGACAATTGTTGGGCTTAGTTTTCAAGCAGTTTAGCCTTGTACATTAGCTCACCAACTTCCTCTCCTCCACTTTTGATACTCCTTTTTGCTGCTGCTATTTTGATTAGCTTTGCTCTTTCATTTGCTGCTGTTTTGCTTCATATCTCCTTCCGAGAACTGCCCGTTTGCTCGAGAAGATTGGTGCGCTTTTTGCTGCAATTGGTGTGTGTATCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGATTTGTTGGGTAGCATGTGCCTTCTCCATCATTGTCTTTGCTTTATCATTTAAGTGA
mRNA sequence
ATGGCTTCAACTTCACACCAAACCGCTTTAGATATGAGGGCAGTTTCTTTCTTGATCCCAACAATCAGCCAAAGAAACTATGGACTGAGCTGTTTCTGCACATCATCAAATTGTTTACCAGTTTGCATTAGAAGCCCTCAAGCAACAGCCATTAGCTCTCAAAATCTTGGCAGGACAATTGTTGGGCTTAGTTTTCAAGCACTTTGCTCTTTCATTTGCTGCTGTTTTGCTTCATATCTCCTTCCGAGAACTGCCCGTTTGCTCGAGAAGATTGGTGCGCTTTTTGCTGCAATTGGTGTGTGTATCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGATTTGTTGGGTAGCATGTGCCTTCTCCATCATTGTCTTTGCTTTATCATTTAAGTGA
Coding sequence (CDS)
ATGGCTTCAACTTCACACCAAACCGCTTTAGATATGAGGGCAGTTTCTTTCTTGATCCCAACAATCAGCCAAAGAAACTATGGACTGAGCTGTTTCTGCACATCATCAAATTGTTTACCAGTTTGCATTAGAAGCCCTCAAGCAACAGCCATTAGCTCTCAAAATCTTGGCAGGACAATTGTTGGGCTTAGTTTTCAAGCACTTTGCTCTTTCATTTGCTGCTGTTTTGCTTCATATCTCCTTCCGAGAACTGCCCGTTTGCTCGAGAAGATTGGTGCGCTTTTTGCTGCAATTGGTGTGTGTATCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGATTTGTTGGGTAGCATGTGCCTTCTCCATCATTGTCTTTGCTTTATCATTTAAGTGA
Protein sequence
MASTSHQTALDMRAVSFLIPTISQRNYGLSCFCTSSNCLPVCIRSPQATAISSQNLGRTIVGLSFQALCSFICCCFASYLLPRTARLLEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK
Homology
BLAST of IVF0022091 vs. ExPASy TrEMBL
Match:
A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1)
HSP 1 Score: 166.0 bits (419), Expect = 1.1e-37
Identity = 99/164 (60.37%), Postives = 108/164 (65.85%), Query Frame = 0
Query: 1 MASTSHQTALDMRAVSFLIPTISQRNYGLSCFCTSSNCLPVCIR---SPQATAISSQNLG 60
MASTSHQT+LDM A S I TISQRNYGL C CT SNCLPV IR SPQATA SSQ LG
Sbjct: 1 MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLG 60
Query: 61 RTIVGLSFQALCS-----------------FICCCFASYLL-----------PRTARLLE 120
+ I+ LSFQA+ + F F S+ + PRTA L E
Sbjct: 61 KIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFE 120
Query: 121 KIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK 134
K+GALF+A GVC IASFLLVHQNFAWICWVAC FSIIVFALSFK
Sbjct: 121 KVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164
BLAST of IVF0022091 vs. ExPASy TrEMBL
Match:
A0A0A0KJN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1)
HSP 1 Score: 93.2 bits (230), Expect = 8.8e-16
Identity = 69/164 (42.07%), Postives = 90/164 (54.88%), Query Frame = 0
Query: 1 MASTSHQTALDMRAVSFLIPTISQRNYGLSCFCTSSNCLPVCI----RSPQATAISSQNL 60
M S+S Q ++DM + LI +I++RN N LP+CI SP ++ + N+
Sbjct: 1 MESSSQQISIDMNHLYSLITSINERN-------PEINGLPICIIMQTASPANSSKTENNV 60
Query: 61 GRTIVGLSFQA-LCSFICCCFASYLL--------------------------PRTARLLE 120
G TI+GL+FQA L FI +S L PR A L E
Sbjct: 61 GTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFE 120
Query: 121 KIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK 134
KIGAL AAIGVCI+AS LL+HQNFAWI W+AC FS++ F LSF+
Sbjct: 121 KIGALIAAIGVCILAS-LLIHQNFAWISWLACGFSLMAFLLSFR 156
BLAST of IVF0022091 vs. ExPASy TrEMBL
Match:
A0A0A0KQ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1)
HSP 1 Score: 83.2 bits (204), Expect = 9.1e-13
Identity = 60/166 (36.14%), Postives = 88/166 (53.01%), Query Frame = 0
Query: 1 MAST-SHQTALDMRAVSFLIPTISQRNYGLSCFCT----SSNCLPVCIRSPQATAISSQN 60
MA T H+ +LDM ++ LI ++ RN G+S CT +S+CLP+ I+ + + ++S
Sbjct: 1 MAETPPHEISLDMNKLNSLIFAVTNRNPGISS-CTWGGAASDCLPIYIKMQRPSPVNSPQ 60
Query: 61 LGRTIVGLSFQALCSFICC------------CFASYLL----------------PRTARL 120
G T + L+FQA+ FA+ +L P+TA+L
Sbjct: 61 FGNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQL 120
Query: 121 LEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK 134
L+ GALFAAIG CII S LL++ NF WICW+A + F +SFK
Sbjct: 121 LQTFGALFAAIGTCIIGS-LLLYPNFTWICWLAAGLILPAFIISFK 164
BLAST of IVF0022091 vs. ExPASy TrEMBL
Match:
A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1)
HSP 1 Score: 81.6 bits (200), Expect = 2.6e-12
Identity = 60/153 (39.22%), Postives = 79/153 (51.63%), Query Frame = 0
Query: 12 MRAVSFLIPTISQRNYGLSCFCTSSNCLPVCIR----SPQATAISSQNLGRTIVGLSFQA 71
M + I I++RN N LP+CI SP ++ + N+G+TI+GL+FQA
Sbjct: 1 MNELYSFITAINERN-------PEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQA 60
Query: 72 LCSF-----------------------ICCCFASYLL----PRTARLLEKIGALFAAIGV 131
+ + FA L PR A L EKIGAL AAIGV
Sbjct: 61 VLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAAIGV 120
Query: 132 CIIASFLLVHQNFAWICWVACAFSIIVFALSFK 134
CI+AS LL+HQNFAWI W+A FS++ F LSF+
Sbjct: 121 CIVAS-LLIHQNFAWISWLASGFSLMAFVLSFR 145
BLAST of IVF0022091 vs. ExPASy TrEMBL
Match:
A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1)
HSP 1 Score: 72.4 bits (176), Expect = 1.6e-09
Identity = 57/164 (34.76%), Postives = 79/164 (48.17%), Query Frame = 0
Query: 1 MASTS-HQTALDMRAVSFLIPTISQRNYGLSCFCT----SSNCLPVCIRSPQATAISSQN 60
MA T H+ +LDM + I ++ RN G+S CT +S+CLP+ I+ + + ++S
Sbjct: 1 MAETKPHEISLDMNELYSFITAVTNRNPGISS-CTWGTAASDCLPIYIKMQRPSPVNSPQ 60
Query: 61 LGRTIVGLSFQA-----------------------LCSFI---CCCFASYLLPRTARLLE 120
G T V +FQA L +F+ C P+ A LL+
Sbjct: 61 FGNTFVSSNFQAILGLFLNLPPSPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQ 120
Query: 121 KIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK 134
GAL AAIGVCI+ S LL H N WI W+AC + F SFK
Sbjct: 121 MFGALLAAIGVCIMGSPLL-HPNLTWIRWLACGLILPAFITSFK 162
BLAST of IVF0022091 vs. NCBI nr
Match:
KGN49808.1 (hypothetical protein Csa_004650 [Cucumis sativus])
HSP 1 Score: 167 bits (424), Expect = 2.63e-50
Identity = 99/164 (60.37%), Postives = 108/164 (65.85%), Query Frame = 0
Query: 1 MASTSHQTALDMRAVSFLIPTISQRNYGLSCFCTSSNCLPVCIR---SPQATAISSQNLG 60
MASTSHQT+LDM A S I TISQRNYGL C CT SNCLPV IR SPQATA SSQ LG
Sbjct: 1 MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLG 60
Query: 61 RTIVGLSFQALCS-----------------FICCCFASYLL-----------PRTARLLE 120
+ I+ LSFQA+ + F F S+ + PRTA L E
Sbjct: 61 KIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFE 120
Query: 121 KIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK 133
K+GALF+A GVC IASFLLVHQNFAWICWVAC FSIIVFALSFK
Sbjct: 121 KVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164
BLAST of IVF0022091 vs. NCBI nr
Match:
KGN49803.1 (hypothetical protein Csa_004681 [Cucumis sativus])
HSP 1 Score: 95.5 bits (236), Expect = 6.34e-22
Identity = 69/164 (42.07%), Postives = 91/164 (55.49%), Query Frame = 0
Query: 1 MASTSHQTALDMRAVSFLIPTISQRNYGLSCFCTSSNCLPVCI----RSPQATAISSQNL 60
M S+S Q ++DM + LI +I++RN + N LP+CI SP ++ + N+
Sbjct: 1 MESSSQQISIDMNHLYSLITSINERNPEI-------NGLPICIIMQTASPANSSKTENNV 60
Query: 61 GRTIVGLSFQA-LCSFICCCFASYLL--------------------------PRTARLLE 120
G TI+GL+FQA L FI +S L PR A L E
Sbjct: 61 GTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFE 120
Query: 121 KIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK 133
KIGAL AAIGVCI+AS LL+HQNFAWI W+AC FS++ F LSF+
Sbjct: 121 KIGALIAAIGVCILAS-LLIHQNFAWISWLACGFSLMAFLLSFR 156
BLAST of IVF0022091 vs. NCBI nr
Match:
KGN49806.1 (hypothetical protein Csa_004683 [Cucumis sativus])
HSP 1 Score: 85.5 bits (210), Expect = 6.02e-18
Identity = 60/166 (36.14%), Postives = 88/166 (53.01%), Query Frame = 0
Query: 1 MASTS-HQTALDMRAVSFLIPTISQRNYGLSCFCT----SSNCLPVCIRSPQATAISSQN 60
MA T H+ +LDM ++ LI ++ RN G+S CT +S+CLP+ I+ + + ++S
Sbjct: 1 MAETPPHEISLDMNKLNSLIFAVTNRNPGISS-CTWGGAASDCLPIYIKMQRPSPVNSPQ 60
Query: 61 LGRTIVGLSFQALCSFICCC------------FASYLL----------------PRTARL 120
G T + L+FQA+ FA+ +L P+TA+L
Sbjct: 61 FGNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQL 120
Query: 121 LEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK 133
L+ GALFAAIG CII S LL++ NF WICW+A + F +SFK
Sbjct: 121 LQTFGALFAAIGTCIIGS-LLLYPNFTWICWLAAGLILPAFIISFK 164
BLAST of IVF0022091 vs. NCBI nr
Match:
KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])
HSP 1 Score: 83.2 bits (204), Expect = 3.08e-17
Identity = 63/153 (41.18%), Postives = 81/153 (52.94%), Query Frame = 0
Query: 12 MRAVSFLIPTISQRNYGLSCFCTSSNCLPVCIR----SPQATAISSQNLGRTIVGLSFQA 71
M + I I++RN + N LP+CI SP ++ + N+G+TI+GL+FQA
Sbjct: 1 MNELYSFITAINERNPEI-------NSLPICITMQRPSPANSSKTENNVGKTILGLTFQA 60
Query: 72 -LCSFI----------------------CCCFASYLL----PRTARLLEKIGALFAAIGV 131
L FI FA L PR A L EKIGAL AAIGV
Sbjct: 61 VLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAAIGV 120
Query: 132 CIIASFLLVHQNFAWICWVACAFSIIVFALSFK 133
CI+AS LL+HQNFAWI W+A FS++ F LSF+
Sbjct: 121 CIVAS-LLIHQNFAWISWLASGFSLMAFVLSFR 145
BLAST of IVF0022091 vs. NCBI nr
Match:
KAG6579132.1 (hypothetical protein SDJN03_23580, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 80.1 bits (196), Expect = 3.53e-16
Identity = 55/131 (41.98%), Postives = 71/131 (54.20%), Query Frame = 0
Query: 32 FCTSSNCLPVCIRSPQATAISS--QNLGRTIVGLSFQALCS----------------FIC 91
F T +CLP+ Q N+G+ I+GL+ QAL + F
Sbjct: 3 FSTPRDCLPIWRAREQRLEPDKGHSNVGKAIIGLTSQALLAMFISSPSSSPPLLRVLFGA 62
Query: 92 CCFASYLL-----------PRTARLLEKIGALFAAIGVCIIASFLLVHQNFAWICWVACA 133
F S+LL P+ ARL EK+GALFAAIGV IIASFLL+H+N+AWI +AC
Sbjct: 63 TMFISFLLSFAGIFLRNAFPKAARLFEKLGALFAAIGVSIIASFLLMHENYAWISGLACV 122
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KJP2 | 1.1e-37 | 60.37 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1 | [more] |
A0A0A0KJN8 | 8.8e-16 | 42.07 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1 | [more] |
A0A0A0KQ03 | 9.1e-13 | 36.14 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1 | [more] |
A0A5A7U7U1 | 2.6e-12 | 39.22 | Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3BEH8 | 1.6e-09 | 34.76 | Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... | [more] |
Match Name | E-value | Identity | Description | |
KGN49808.1 | 2.63e-50 | 60.37 | hypothetical protein Csa_004650 [Cucumis sativus] | [more] |
KGN49803.1 | 6.34e-22 | 42.07 | hypothetical protein Csa_004681 [Cucumis sativus] | [more] |
KGN49806.1 | 6.02e-18 | 36.14 | hypothetical protein Csa_004683 [Cucumis sativus] | [more] |
KAA0050246.1 | 3.08e-17 | 41.18 | putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... | [more] |
KAG6579132.1 | 3.53e-16 | 41.98 | hypothetical protein SDJN03_23580, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |