IVF0022063 (gene) Melon (IVF77) v1

Overview


Name	IVF0022063
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Thioredoxin
Location	chr04: 4139188 .. 4140442 (+)
RNA-Seq Expression	IVF0022063
Synteny	IVF0022063

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGTGATCGATGCTTACCTAGTTGCGTACCGCGTAGTGTAAGCCGCAAAATCAGATGCTCTTCTCTTTTTTCTTTGCTTATTATACCTTTCTTGTATTTGTTCTCTCCTAACGCACTCCCATTGTTCCGATTCTTCAACGTCGAAAAGTCGGAGCTCTCCCAGCTTTCTCAATGGTTCCATTTCATATCCACCGCTAATGGAGCTTTCCAATTACTCCTTCATTTCCTTCTCTTCTTCCTATAAATGGACCCATTTACATTTGTATTACTTCAATTCAATTTCCCTGTTCGACGACGATCTTACAGGGAAAACCAATTCCAAGTTATTACTCTCTTTGCTCTAGTAATTTAAGATCCAACATGGCGGAAAAGAGCCAAGTGATTACGTGCCATACCGTTCAATCATGGAAGCAGCAGCTCCTCAAAGGGAAACAATCTGATAAATTGGTACTGCTTGATCCAAAATCTATTGGTTTCTTCATGTGTTCTTCCTCTTCTCTTCCTCTTTTTAAACAATTTTAATTCTACAGATTGTCGTGGACTTCACCGCTGCATGGTGCGGTCCGTGCCGTGCCATTGCTCCGGTTTTTGTAGAGCTGGCTGAGAAGATGAGTAATGTCATTTTCTTGAAGGTCGACGTTGATAAATTGACTGTAAGTTGATTCAATTCAAGCTTTCTAGATTTCTTTACGAATGACTCAATCCTAGCAGCATCAATGCAGAATTGTCCAAAATCTCTCGTGATTTGGGCCATTCCGCATTAATGCCTCTAGAATGGGCTGTCCGTACCAAAATCTCCAAGATCTCTGCCCTACAAAACTATTGTTTTGTTAATTGAGTGATATTGTTAAGACCACAAACGAATAATGGAAATCTTTTGTGCAGACTGTTGCTGCGGAATGGGGAGTGAGTGCACTACCTTGTTTCATGTTCTTGAAGAATGGGAATGTGGTGGATAGGTTTGTAGGTGCAAGAAAAGATGCATTGCGGAAGCTCGTATTACACCATGCCTAATCTAATGGGGAAACGCTATGCTGAGGAGATAACGACCATCTGTTTTTTTTCTTGGATTTCGATCAGAACCAGAAAAAGGTTTATGCAACTTTTGTGAGTTGCTATAAATTAATGCTTTTTAGTTAGCACAACTTTGATTTTTCTTGTTTAGGATTGTTCTTAAATCATTTTTACTATTTCTCGAGGCTAATGAATGAGCATCTATTCTTTTCTTGAATAAAAATCAGCACCTATTTTCAG

mRNA sequence

GGCGTGATCGATGCTTACCTAGTTGCGTACCGCGTAGTGTAAGCCGCAAAATCAGATGCTCTTCTCTTTTTTCTTTGCTTATTATACCTTTCTTGTATTTGTTCTCTCCTAACGCACTCCCATTGTTCCGATTCTTCAACGTCGAAAAGTCGGAGCTCTCCCAGCTTTCTCAATGGTTCCATTTCATATCCACCGCTAATGGAGCTTTCCAATTACTCCTTCATTTCCTTCTCTTCTTCCTATAAATGGACCCATTTACATTTGTATTACTTCAATTCAATTTCCCTGTTCGACGACGATCTTACAGGGAAAACCAATTCCAAGTTATTACTCTCTTTGCTCTAGTAATTTAAGATCCAACATGGCGGAAAAGAGCCAAGTGATTACGTGCCATACCGTTCAATCATGGAAGCAGCAGCTCCTCAAAGGGAAACAATCTGATAAATTGATTGTCGTGGACTTCACCGCTGCATGGTGCGGTCCGTGCCGTGCCATTGCTCCGGTTTTTGTAGAGCTGGCTGAGAAGATGAGTAATGTCATTTTCTTGAAGGTCGACGTTGATAAATTGACTACTGTTGCTGCGGAATGGGGAGTGAGTGCACTACCTTGTTTCATGTTCTTGAAGAATGGGAATGTGGTGGATAGGTTTGTAGGTGCAAGAAAAGATGCATTGCGGAAGCTCGTATTACACCATGCCTAATCTAATGGGGAAACGCTATGCTGAGGAGATAACGACCATCTGTTTTTTTTCTTGGATTTCGATCAGAACCAGAAAAAGGTTTATGCAACTTTTGTGAGTTGCTATAAATTAATGCTTTTTAGTTAGCACAACTTTGATTTTTCTTGTTTAGGATTGTTCTTAAATCATTTTTACTATTTCTCGAGGCTAATGAATGAGCATCTATTCTTTTCTTGAATAAAAATCAGCACCTATTTTCAG

Coding sequence (CDS)

ATGGCGGAAAAGAGCCAAGTGATTACGTGCCATACCGTTCAATCATGGAAGCAGCAGCTCCTCAAAGGGAAACAATCTGATAAATTGATTGTCGTGGACTTCACCGCTGCATGGTGCGGTCCGTGCCGTGCCATTGCTCCGGTTTTTGTAGAGCTGGCTGAGAAGATGAGTAATGTCATTTTCTTGAAGGTCGACGTTGATAAATTGACTACTGTTGCTGCGGAATGGGGAGTGAGTGCACTACCTTGTTTCATGTTCTTGAAGAATGGGAATGTGGTGGATAGGTTTGTAGGTGCAAGAAAAGATGCATTGCGGAAGCTCGTATTACACCATGCCTAA

Protein sequence

MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA

Homology

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BLAST of IVF0022063 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.2e-35
Identity = 66/110 (60.00%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 2   AEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVIF 61
           AE+ QVI CHTV++W +QL KG  +  LIVVDFTA+WCGPCR IAP   ELA+K+ NV F
Sbjct: 3   AEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTF 62

Query: 62  LKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHH 112
           LKVDVD+L TVA EW V ++P FMFLK G ++D+ VGA+KD L++ +  H
Sbjct: 63  LKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKH 112

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BLAST of IVF0022063 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-34
Identity = 61/110 (55.45%), Postives = 85/110 (77.27%), Query Frame = 0


Query: 2   AEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVIF 61
           +E+ QVI CHTV++W +QL K  +S  L+VVDFTA+WCGPCR IAP F +LA+K+ NV+F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 62  LKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHH 112
           LKVD D+L +VA++W + A+P FMFLK G ++D+ VGA+KD L+  +  H
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

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BLAST of IVF0022063 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-33
Identity = 61/111 (54.95%), Postives = 86/111 (77.48%), Query Frame = 0


Query: 2   AEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVIF 61
           +E+ QV  CH V+ W +   KG ++ KL+VVDFTA+WCGPCR IAP+  ++A+KM +VIF
Sbjct: 9   SEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIF 68

Query: 62  LKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 113
           LKVDVD+L TV+AEW V A+P F+F+K+G  VDR VGA+K+ L++ ++ HA
Sbjct: 69  LKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHA 119

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BLAST of IVF0022063 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.4e-33
Identity = 64/111 (57.66%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAE+ QVI  HTV +W + L KG    KLIVVDFTA+WCGPC+ IA  + ELA+KM  V 
Sbjct: 1   MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVT 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHH 112
           FLKVDVD+L +VA +W V A+P FMFLK G +VD+ VGA+KD L++ +  H
Sbjct: 61  FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKH 111

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BLAST of IVF0022063 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-31
Identity = 57/111 (51.35%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MA + +VI CHT++ W +++    +S KLIV+DFTA+WC PCR IAPVF E+A+K +NV+
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHH 112
           F K+DVD+L  VA E+ V A+P F+F+K GN++DR VGA KD + + ++ H
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

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BLAST of IVF0022063 vs. ExPASy TrEMBL
Match: A0A5A7V9W3 (Thioredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00080 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.3e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI
Sbjct: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 113
           FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112

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BLAST of IVF0022063 vs. ExPASy TrEMBL
Match: A0A1S3CSR4 (Thioredoxin OS=Cucumis melo OX=3656 GN=LOC103503910 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.3e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI
Sbjct: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 113
           FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112

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BLAST of IVF0022063 vs. ExPASy TrEMBL
Match: A0A0A0LGF7 (Thioredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G865340 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.2e-54
Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAEKSQVI CHTV+SWKQQLLKGKQ DKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI
Sbjct: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 113
           FLKVDVDKLTTVAAEWGVSALPCFMFLKNG +VDRFVGARKDALRKLV HHA
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112

[Close]

BLAST of IVF0022063 vs. ExPASy TrEMBL
Match: A0A6J1IM69 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111476523 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.6e-49
Identity = 98/112 (87.50%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAE S VITCHTV SWKQQLLKGKQS+KLIVVDFTAAWCGPCRAIAP F ELA+KMSNVI
Sbjct: 1   MAENSGVITCHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAIAPAFAELAKKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 113
           FLKVDVDKL TVAAEWGV ALPCFMFLKNG VV RFVGARKDAL+K+VL HA
Sbjct: 61  FLKVDVDKLNTVAAEWGVGALPCFMFLKNGKVVARFVGARKDALQKIVLQHA 112

[Close]

BLAST of IVF0022063 vs. ExPASy TrEMBL
Match: A0A6J1DWZ0 (thioredoxin H1-like OS=Momordica charantia OX=3673 GN=LOC111025278 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47
Identity = 91/112 (81.25%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           M +K +VI CHTV SWKQQLLKGKQS+KLIVVDFTAAWCGPCRA+AP+F ELA KMS+VI
Sbjct: 1   MVDKREVIACHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPLFAELANKMSSVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 113
           FLKVDVD+LTTVAAEWGVSALPCF+FLKNGN+VDRFVGAR+D L+K++L HA
Sbjct: 61  FLKVDVDELTTVAAEWGVSALPCFVFLKNGNLVDRFVGARRDVLQKIILQHA 112

[Close]

BLAST of IVF0022063 vs. NCBI nr
Match: XP_008466520.1 (PREDICTED: thioredoxin H-type-like [Cucumis melo] >KAA0063226.1 thioredoxin H-type-like [Cucumis melo var. makuwa] >TYK13476.1 thioredoxin H-type-like [Cucumis melo var. makuwa])

HSP 1 Score: 230 bits (587), Expect = 3.07e-76
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI
Sbjct: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112
           FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112

[Close]

BLAST of IVF0022063 vs. NCBI nr
Match: XP_004147847.1 (thioredoxin H-type [Cucumis sativus] >KGN59999.1 hypothetical protein Csa_001620 [Cucumis sativus])

HSP 1 Score: 219 bits (558), Expect = 8.16e-72
Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAEKSQVI CHTV+SWKQQLLKGKQ DKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI
Sbjct: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112
           FLKVDVDKLTTVAAEWGVSALPCFMFLKNG +VDRFVGARKDALRKLV HHA
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112

[Close]

BLAST of IVF0022063 vs. NCBI nr
Match: XP_038898480.1 (thioredoxin H1-like [Benincasa hispida])

HSP 1 Score: 215 bits (547), Expect = 4.88e-70
Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           M +KS+VITCHTV SWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVF ELAEKMSNVI
Sbjct: 8   MMQKSEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFAELAEKMSNVI 67

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112
           FLKVDVDKLTTVAAEWGVSALPCFMFLKNG VV+RFVGARKDALRKLVL HA
Sbjct: 68  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVERFVGARKDALRKLVLQHA 119

[Close]

BLAST of IVF0022063 vs. NCBI nr
Match: KAG6591291.1 (hypothetical protein SDJN03_13637, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024175.1 hypothetical protein SDJN02_12989 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 205 bits (522), Expect = 2.53e-66
Identity = 100/112 (89.29%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAE S VITCHTV SWKQQLLKGKQS+KLIVVDFTAAWCGPCRAIAPVF ELA+KMSNVI
Sbjct: 1   MAENSGVITCHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAIAPVFAELAKKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112
           FLKVDVDKL TVAAEWGVSALPCFMFLKNG VV RFVGARKDAL+K+VL HA
Sbjct: 61  FLKVDVDKLNTVAAEWGVSALPCFMFLKNGKVVARFVGARKDALQKIVLQHA 112

[Close]

BLAST of IVF0022063 vs. NCBI nr
Match: XP_022975984.1 (thioredoxin H-type-like [Cucurbita maxima] >XP_022975985.1 thioredoxin H-type-like [Cucurbita maxima])

HSP 1 Score: 202 bits (514), Expect = 4.20e-65
Identity = 98/112 (87.50%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAE S VITCHTV SWKQQLLKGKQS+KLIVVDFTAAWCGPCRAIAP F ELA+KMSNVI
Sbjct: 1   MAENSGVITCHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAIAPAFAELAKKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112
           FLKVDVDKL TVAAEWGV ALPCFMFLKNG VV RFVGARKDAL+K+VL HA
Sbjct: 61  FLKVDVDKLNTVAAEWGVGALPCFMFLKNGKVVARFVGARKDALQKIVLQHA 112

[Close]

BLAST of IVF0022063 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 147.1 bits (370), Expect = 8.3e-36
Identity = 61/110 (55.45%), Postives = 85/110 (77.27%), Query Frame = 0


Query: 2   AEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVIF 61
           +E+ QVI CHTV++W +QL K  +S  L+VVDFTA+WCGPCR IAP F +LA+K+ NV+F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 62  LKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHH 112
           LKVD D+L +VA++W + A+P FMFLK G ++D+ VGA+KD L+  +  H
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of IVF0022063 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 136.3 bits (342), Expect = 1.5e-32
Identity = 57/111 (51.35%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MA + +VI CHT++ W +++    +S KLIV+DFTA+WC PCR IAPVF E+A+K +NV+
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHH 112
           F K+DVD+L  VA E+ V A+P F+F+K GN++DR VGA KD + + ++ H
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of IVF0022063 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 134.0 bits (336), Expect = 7.3e-32
Identity = 64/111 (57.66%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 2   AEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEK-MSNVI 61
           AE+ QVI CHT   W  QL K K+S+KLIV+DFTA+WC PCR IAP+F +LA+K MS+ I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHH 112
           F KVDVD+L +VA E+GV A+P F+F+K G VVD+ VGA K+ L+  ++ H
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of IVF0022063 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 124.0 bits (310), Expect = 7.5e-29
Identity = 55/104 (52.88%), Postives = 75/104 (72.12%), Query Frame = 0


Query: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MA + +VI CHTV+ W ++L    +S KLIV+DFTA WC PCR IAPVF +LA+K  +V+
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDAL 105
           F KVDVD+L TVA E+ V A+P F+F+K G + +  VGA K+ +
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEI 104

[Close]

BLAST of IVF0022063 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 )

HSP 1 Score: 106.3 bits (264), Expect = 1.6e-23
Identity = 44/97 (45.36%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 12  TVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVIFLKVDVDKLTT 71
           T +SW  +L +  +  K++V +F+A WCGPC+ +AP F+EL+EK S+++FL VDVD+L+ 
Sbjct: 30  TKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDELSD 89

Query: 72  VAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLV 109
            ++ W + A P F FLKNG  + + VGA K  L+K V
Sbjct: 90  FSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKV 126

The following BLAST results are available for this feature:

BLAST of IVF0022063 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43636	5.2e-35	60.00	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
P29448	1.2e-34	55.45	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
P29449	1.3e-33	54.95	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q07090	8.4e-33	57.66	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]
Q39241	2.1e-31	51.35	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]

BLAST of IVF0022063 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V9W3	2.3e-57	100.00	Thioredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00080 PE...	[more]
A0A1S3CSR4	2.3e-57	100.00	Thioredoxin OS=Cucumis melo OX=3656 GN=LOC103503910 PE=3 SV=1	[more]
A0A0A0LGF7	5.2e-54	94.64	Thioredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G865340 PE=3 SV=1	[more]
A0A6J1IM69	6.6e-49	87.50	thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111476523 PE=4 SV=1	[more]
A0A6J1DWZ0	1.6e-47	81.25	thioredoxin H1-like OS=Momordica charantia OX=3673 GN=LOC111025278 PE=4 SV=1	[more]

BLAST of IVF0022063 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466520.1	3.07e-76	100.00	PREDICTED: thioredoxin H-type-like [Cucumis melo] >KAA0063226.1 thioredoxin H-ty...	[more]
XP_004147847.1	8.16e-72	94.64	thioredoxin H-type [Cucumis sativus] >KGN59999.1 hypothetical protein Csa_001620...	[more]
XP_038898480.1	4.88e-70	92.86	thioredoxin H1-like [Benincasa hispida]	[more]
KAG6591291.1	2.53e-66	89.29	hypothetical protein SDJN03_13637, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022975984.1	4.20e-65	87.50	thioredoxin H-type-like [Cucurbita maxima] >XP_022975985.1 thioredoxin H-type-li...	[more]

BLAST of IVF0022063 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	8.3e-36	55.45	thioredoxin H-type 1	[more]
AT1G45145.1	1.5e-32	51.35	thioredoxin H-type 5	[more]
AT1G19730.1	7.3e-32	57.66	Thioredoxin superfamily protein	[more]
AT5G42980.1	7.5e-29	52.88	thioredoxin 3	[more]
AT3G08710.1	1.6e-23	45.36	thioredoxin H-type 9	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 30..38 score: 51.98 coord: 38..47 score: 67.0 coord: 77..88 score: 31.9
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..112 e-value: 1.1E-38 score: 133.9
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 1..112
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..112
None	No IPR available	CDD	cd02947	TRX_family	coord: 25..108 e-value: 4.21109E-35 score: 114.192
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 9..107 e-value: 7.2E-29 score: 99.8
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..112 score: 13.024687
IPR005746	Thioredoxin	PIRSF	PIRSF000077	Thioredoxin	coord: 5..112 e-value: 1.8E-28 score: 96.6
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 31..49
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 5..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0022063.2	IVF0022063.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
molecular_function	GO:0015035	protein-disulfide reductase activity