IVF0022042 (gene) Melon (IVF77) v1

Overview


Name	IVF0022042
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	F-box protein SKIP24 isoform X1
Location	chr08: 12158857 .. 12162998 (+)
RNA-Seq Expression	IVF0022042
Synteny	IVF0022042

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTGCTCCGATGATGTTTGGAATTGGATTCTAATTTGTAGGGCTATTTCACTCTTCATTTCCATCTTCGCAAATCCGAAAATGTCTGAATTGCCAGATGAGCTATGGAGCCAATTCTCCAAATTGGTGTAAAGACCTCTGCTTTGACTTATAAAGATCTTTGTTGCGTCTCCATCTCTTCTCCTCGACTTCGCCGCCTCTCCGACCATGACTCTCTCTGGTCTCATCTTCTTTCCTCCGATTACCCTTCATCCTCGTCTTCTTTTCCATCTTCCGCTTCCTCCTCAAAGTCCCTTTACAAAATCAGGTAGAAGGAAGAATTCATTATCTCTGAATTTCTCTCTTCCAATATCTCTCAATTCATATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGTTCTGGTTAGGTTGGAGAGAGATAGATATAGGAAGAAAGCGGCGCATACGAGAGCTGTTCTTAGAAAGGAAAGTCAAATAGCTGAGCATTATAGGAGGGTTGGTCAATTAGAGGAACGGTTGATCGAGGAGACCAGCAAATGCACAACGACCTTGACGGAATTGTCTAATTTACGCACAGTCAGGTAGTGCTCGGCAATTGATTCAAAATCCATCAGTCATATTTTCTGTTTATTTTCTCGTTTGGTCTTTCAGTGATATGTTATGTGTGCATGTGCAACTTGGTTACTTGCAATCTGTAAAATTGTTGATTGGAATTGTGTTTTCGTTGAGTTTTCTGAGCATTGTAGATTCACTAGGATCCTCTTACTAAATTTTGAGTTCAACAACATCTGGGGTCGAGGCGCATGAATCTCTAACCTTTTGGGTCGAGGCATGTGCCTAAACCTGTTTGAACTATGCTTAGGTTGGCAAGATCATTTTACTAGGTCGGGTGGTACTTCAGTTATTTGTTGACAACAAAGCCCAATGGATTCGTTTGGAAGCTTTTTACCTCTTCACGTGAATGCTAAAATGTTGAGTTCAATTTGAAGTCAGAATTTTTAGATTTGGTCGTCTCAGGGAAGCAACAGTAGCTTTGAACGTCTGGCAGCCTGAGGTCATTAGGGCAAGGCAAAAGCAAATTGTTGAACAATGCAGTGTATCTGTTGATTCTCGTTTGCGGACTCTAGATATGGAGCTCAAGCTTTGTAAGCAACAAATTGCTATTTTTCAAAAAGCACTTGTAAGTTTTGAATGTGGAAACATTATTTTTCTTTCTGTCAAGAACTATTATTTTAATTTCTTATACTGCTTCCCACAGAAAGATGAAAAAAGAGATTGGAATTAGCTAAAGAAGAGTTAACTTCATTGAAGTATCACCCTCTAAAGGATCATAAATCTATGAATAGCAGTAATAATGATTCTCACATCAAGAGGAGGTCAAAGGATGCAATAAACGTAAGGTTCTTGCTTGTTGATTATGCTTCAAATTTTTTTATTGTGAATTTTGATAATTTTGTCATGTTGATGATGGTTTGGTTGCTATGAAATCTGACTTTCCCGTGAATTCATGAATTCTAATGGTGTGGATGTGCACTGTGCTCTATTAGCATTTTTCTTCTTCGAACCATCAATACTGTTTTCTCATGATGTTAGAACTTCTCCCAGTTTTACCAAATAAACTCATTAGGATGCTACGTACTTCTTATG

mRNA sequence

GATTGCTCCGATGATGTTTGGAATTGGATTCTAATTTGTAGGGCTATTTCACTCTTCATTTCCATCTTCGCAAATCCGAAAATGTCTGAATTGCCAGATGAGCTATGGAGCCAATTCTCCAAATTGGTGTAAAGACCTCTGCTTTGACTTATAAAGATCTTTGTTGCGTCTCCATCTCTTCTCCTCGACTTCGCCGCCTCTCCGACCATGACTCTCTCTGGTCTCATCTTCTTTCCTCCGATTACCCTTCATCCTCGTCTTCTTTTCCATCTTCCGCTTCCTCCTCAAAGTCCCTTTACAAAATCAGGTTGGAGAGAGATAGATATAGGAAGAAAGCGGCGCATACGAGAGCTGTTCTTAGAAAGGAAAGTCAAATAGCTGAGCATTATAGGAGGGTTGGTCAATTAGAGGAACGGTTGATCGAGGAGACCAGCAAATGCACAACGACCTTGACGGAATTGTCTAATTTACGCACAGTCAGATTTGGTCGTCTCAGGGAAGCAACAGTAGCTTTGAACGTCTGGCAGCCTGAGGTCATTAGGGCAAGGCAAAAGCAAATTGTTGAACAATGCAGTGTATCTGTTGATTCTCGTTTGCGGACTCTAGATATGGAGCTCAAGCTTTGTAAGCAACAAATTGCTATTTTTCAAAAAGCACTTGTAAGTTTTGAATGTGGAAACATTATTTTTCTTTCTGTCAAGAACTATTATTTTAATTTCTTATACTGCTTCCCACAGAAAGATGAAAAAAGAGATTGGAATTAGCTAAAGAAGAGTTAACTTCATTGAAGTATCACCCTCTAAAGGATCATAAATCTATGAATAGCAGTAATAATGATTCTCACATCAAGAGGAGGTCAAAGGATGCAATAAACGTAAGGTTCTTGCTTGTTGATTATGCTTCAAATTTTTTTATTGTGAATTTTGATAATTTTGTCATGTTGATGATGGTTTGGTTGCTATGAAATCTGACTTTCCCGTGAATTCATGAATTCTAATGGTGTGGATGTGCACTGTGCTCTATTAGCATTTTTCTTCTTCGAACCATCAATACTGTTTTCTCATGATGTTAGAACTTCTCCCAGTTTTACCAAATAAACTCATTAGGATGCTACGTACTTCTTATG

Coding sequence (CDS)

ATGGAGCCAATTCTCCAAATTGGTGTAAAGACCTCTGCTTTGACTTATAAAGATCTTTGTTGCGTCTCCATCTCTTCTCCTCGACTTCGCCGCCTCTCCGACCATGACTCTCTCTGGTCTCATCTTCTTTCCTCCGATTACCCTTCATCCTCGTCTTCTTTTCCATCTTCCGCTTCCTCCTCAAAGTCCCTTTACAAAATCAGGTTGGAGAGAGATAGATATAGGAAGAAAGCGGCGCATACGAGAGCTGTTCTTAGAAAGGAAAGTCAAATAGCTGAGCATTATAGGAGGGTTGGTCAATTAGAGGAACGGTTGATCGAGGAGACCAGCAAATGCACAACGACCTTGACGGAATTGTCTAATTTACGCACAGTCAGATTTGGTCGTCTCAGGGAAGCAACAGTAGCTTTGAACGTCTGGCAGCCTGAGGTCATTAGGGCAAGGCAAAAGCAAATTGTTGAACAATGCAGTGTATCTGTTGATTCTCGTTTGCGGACTCTAGATATGGAGCTCAAGCTTTGTAAGCAACAAATTGCTATTTTTCAAAAAGCACTTGTAAGTTTTGAATGTGGAAACATTATTTTTCTTTCTGTCAAGAACTATTATTTTAATTTCTTATACTGCTTCCCACAGAAAGATGAAAAAAGAGATTGGAATTAG

Protein sequence

MEPILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLRTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQKALVSFECGNIIFLSVKNYYFNFLYCFPQKDEKRDWN

Homology

[Close]

BLAST of IVF0022042 vs. ExPASy Swiss-Prot
Match: Q9CAZ0 (F-box protein SKIP24 OS=Arabidopsis thaliana OX=3702 GN=SKIP24 PE=1 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 1.6e-40
Identity = 99/183 (54.10%), Postives = 132/183 (72.13%), Query Frame = 0


Query: 4   ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSS-SSSFPSSASSSK 63
           IL+IGVK+S  +YKDLCC+SISS RL RLS  DSLW  LL  D+P+   S+  SS S +K
Sbjct: 14  ILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNHIVSASSSSESPTK 73

Query: 64  SLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNL 123
            +Y  R ER++ RK AAH RA+LRKES+I+E  RR+ +LE RL +E  +  ++  + S+L
Sbjct: 74  FIYMTRFEREKERKLAAHRRALLRKESEISEWGRRIRELEARLSDEAERLQSSSLQFSDL 133

Query: 124 RTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQ 183
                 ++R+A+VALNVWQPEV+R RQKQ+VEQ +V V+ RLR L+ME+KLCKQQI    
Sbjct: 134 L-----KVRQASVALNVWQPEVVRGRQKQMVEQNAVPVEGRLRALEMEMKLCKQQIMGLN 191

Query: 184 KAL 186
           +AL
Sbjct: 194 RAL 191

[Close]

BLAST of IVF0022042 vs. ExPASy TrEMBL
Match: A0A1S4E0Q4 (F-box protein SKIP24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.9e-90
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 4   ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 63
           ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS
Sbjct: 12  ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 71

Query: 64  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 123
           LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR
Sbjct: 72  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 131

Query: 124 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 183
           TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK
Sbjct: 132 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 191

Query: 184 AL 186
           AL
Sbjct: 192 AL 193

[Close]

BLAST of IVF0022042 vs. ExPASy TrEMBL
Match: A0A5A7TK06 (F-box protein SKIP24 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G001020 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.9e-90
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 4   ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 63
           ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS
Sbjct: 12  ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 71

Query: 64  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 123
           LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR
Sbjct: 72  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 131

Query: 124 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 183
           TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK
Sbjct: 132 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 191

Query: 184 AL 186
           AL
Sbjct: 192 AL 193

[Close]

BLAST of IVF0022042 vs. ExPASy TrEMBL
Match: A0A1S3C1S8 (F-box protein SKIP24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.9e-90
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 4   ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 63
           ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS
Sbjct: 12  ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 71

Query: 64  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 123
           LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR
Sbjct: 72  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 131

Query: 124 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 183
           TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK
Sbjct: 132 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 191

Query: 184 AL 186
           AL
Sbjct: 192 AL 193

[Close]

BLAST of IVF0022042 vs. ExPASy TrEMBL
Match: A0A1S4E1G0 (F-box protein SKIP24 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.9e-90
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 4   ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 63
           ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS
Sbjct: 12  ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 71

Query: 64  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 123
           LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR
Sbjct: 72  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 131

Query: 124 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 183
           TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK
Sbjct: 132 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 191

Query: 184 AL 186
           AL
Sbjct: 192 AL 193

[Close]

BLAST of IVF0022042 vs. ExPASy TrEMBL
Match: A0A5D3CCI3 (F-box protein SKIP24 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001230 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.6e-85
Identity = 177/182 (97.25%), Postives = 177/182 (97.25%), Query Frame = 0


Query: 4   ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 63
           ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS
Sbjct: 12  ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 71

Query: 64  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 123
           LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR
Sbjct: 72  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 131

Query: 124 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 183
           TV     REATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK
Sbjct: 132 TV-----REATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 188

Query: 184 AL 186
           AL
Sbjct: 192 AL 188

[Close]

BLAST of IVF0022042 vs. NCBI nr
Match: XP_016901825.1 (PREDICTED: F-box protein SKIP24 isoform X4 [Cucumis melo])

HSP 1 Score: 340 bits (872), Expect = 6.54e-116
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 4   ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 63
           ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS
Sbjct: 12  ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 71

Query: 64  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 123
           LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR
Sbjct: 72  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 131

Query: 124 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 183
           TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK
Sbjct: 132 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 191

Query: 184 AL 185
           AL
Sbjct: 192 AL 193

[Close]

BLAST of IVF0022042 vs. NCBI nr
Match: XP_008455770.1 (PREDICTED: F-box protein SKIP24 isoform X3 [Cucumis melo])

HSP 1 Score: 340 bits (872), Expect = 7.27e-116
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 4   ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 63
           ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS
Sbjct: 12  ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 71

Query: 64  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 123
           LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR
Sbjct: 72  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 131

Query: 124 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 183
           TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK
Sbjct: 132 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 191

Query: 184 AL 185
           AL
Sbjct: 192 AL 193

[Close]

BLAST of IVF0022042 vs. NCBI nr
Match: XP_016901822.1 (PREDICTED: F-box protein SKIP24 isoform X1 [Cucumis melo] >XP_016901823.1 PREDICTED: F-box protein SKIP24 isoform X1 [Cucumis melo])

HSP 1 Score: 340 bits (872), Expect = 8.96e-116
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 4   ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 63
           ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS
Sbjct: 12  ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 71

Query: 64  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 123
           LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR
Sbjct: 72  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 131

Query: 124 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 183
           TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK
Sbjct: 132 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 191

Query: 184 AL 185
           AL
Sbjct: 192 AL 193

[Close]

BLAST of IVF0022042 vs. NCBI nr
Match: KAA0043654.1 (F-box protein SKIP24 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 340 bits (872), Expect = 4.76e-114
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 4   ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 63
           ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS
Sbjct: 12  ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 71

Query: 64  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 123
           LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR
Sbjct: 72  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 131

Query: 124 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 183
           TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK
Sbjct: 132 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 191

Query: 184 AL 185
           AL
Sbjct: 192 AL 193

[Close]

BLAST of IVF0022042 vs. NCBI nr
Match: XP_016901824.1 (PREDICTED: F-box protein SKIP24 isoform X2 [Cucumis melo])

HSP 1 Score: 324 bits (830), Expect = 1.86e-109
Identity = 177/182 (97.25%), Postives = 177/182 (97.25%), Query Frame = 0


Query: 4   ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 63
           ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS
Sbjct: 12  ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSSSFPSSASSSKS 71

Query: 64  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 123
           LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR
Sbjct: 72  LYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNLR 131

Query: 124 TVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 183
           TVR     EATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK
Sbjct: 132 TVR-----EATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQK 188

Query: 184 AL 185
           AL
Sbjct: 192 AL 188

[Close]

BLAST of IVF0022042 vs. TAIR 10
Match: AT1G08710.1 (F-box family protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-41
Identity = 99/183 (54.10%), Postives = 132/183 (72.13%), Query Frame = 0


Query: 4   ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSS-SSSFPSSASSSK 63
           IL+IGVK+S  +YKDLCC+SISS RL RLS  DSLW  LL  D+P+   S+  SS S +K
Sbjct: 14  ILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNHIVSASSSSESPTK 73

Query: 64  SLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNL 123
            +Y  R ER++ RK AAH RA+LRKES+I+E  RR+ +LE RL +E  +  ++  + S+L
Sbjct: 74  FIYMTRFEREKERKLAAHRRALLRKESEISEWGRRIRELEARLSDEAERLQSSSLQFSDL 133

Query: 124 RTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQ 183
                 ++R+A+VALNVWQPEV+R RQKQ+VEQ +V V+ RLR L+ME+KLCKQQI    
Sbjct: 134 L-----KVRQASVALNVWQPEVVRGRQKQMVEQNAVPVEGRLRALEMEMKLCKQQIMGLN 191

Query: 184 KAL 186
           +AL
Sbjct: 194 RAL 191

[Close]

BLAST of IVF0022042 vs. TAIR 10
Match: AT1G08710.2 (F-box family protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-41
Identity = 99/183 (54.10%), Postives = 132/183 (72.13%), Query Frame = 0


Query: 4   ILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSS-SSSFPSSASSSK 63
           IL+IGVK+S  +YKDLCC+SISS RL RLS  DSLW  LL  D+P+   S+  SS S +K
Sbjct: 14  ILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNHIVSASSSSESPTK 73

Query: 64  SLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKCTTTLTELSNL 123
            +Y  R ER++ RK AAH RA+LRKES+I+E  RR+ +LE RL +E  +  ++  + S+L
Sbjct: 74  FIYMTRFEREKERKLAAHRRALLRKESEISEWGRRIRELEARLSDEAERLQSSSLQFSDL 133

Query: 124 RTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFQ 183
                 ++R+A+VALNVWQPEV+R RQKQ+VEQ +V V+ RLR L+ME+KLCKQQI    
Sbjct: 134 L-----KVRQASVALNVWQPEVVRGRQKQMVEQNAVPVEGRLRALEMEMKLCKQQIMGLN 191

Query: 184 KAL 186
           +AL
Sbjct: 194 RAL 191

The following BLAST results are available for this feature:

BLAST of IVF0022042 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAZ0	1.6e-40	54.10	F-box protein SKIP24 OS=Arabidopsis thaliana OX=3702 GN=SKIP24 PE=1 SV=2	[more]

BLAST of IVF0022042 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E0Q4	8.9e-90	100.00	F-box protein SKIP24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=...	[more]
A0A5A7TK06	8.9e-90	100.00	F-box protein SKIP24 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3C1S8	8.9e-90	100.00	F-box protein SKIP24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=...	[more]
A0A1S4E1G0	8.9e-90	100.00	F-box protein SKIP24 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=...	[more]
A0A5D3CCI3	6.6e-85	97.25	F-box protein SKIP24 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of IVF0022042 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901825.1	6.54e-116	100.00	PREDICTED: F-box protein SKIP24 isoform X4 [Cucumis melo]	[more]
XP_008455770.1	7.27e-116	100.00	PREDICTED: F-box protein SKIP24 isoform X3 [Cucumis melo]	[more]
XP_016901822.1	8.96e-116	100.00	PREDICTED: F-box protein SKIP24 isoform X1 [Cucumis melo] >XP_016901823.1 PREDIC...	[more]
KAA0043654.1	4.76e-114	100.00	F-box protein SKIP24 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_016901824.1	1.86e-109	97.25	PREDICTED: F-box protein SKIP24 isoform X2 [Cucumis melo]	[more]

BLAST of IVF0022042 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08710.1	1.2e-41	54.10	F-box family protein	[more]
AT1G08710.2	1.2e-41	54.10	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 14..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0022042.10	IVF0022042.10	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005515	protein binding