IVF0021969 (gene) Melon (IVF77) v1

Overview


Name	IVF0021969
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr02: 21595259 .. 21596676 (+)
RNA-Seq Expression	IVF0021969
Synteny	IVF0021969

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGACCGATTTGTAGCCGTTAGATCGTGAAAATCTCGTAAATCAACCCTCAGATTTGAACAGCGAACAAGAACCACAGACTCAACATTGAAGTGAAGTTACAAAGCCTTGCAAATTAGTTCTCAATTTCTTACTCCTGAAAACCCATTTTCTTCCTCAATCCAAAAAGATCATTCAGGAGAAATGGCCACCGTCACCACTCAAGCTTCTGCCGCCGTTTTCCGGCCATGTGCCGCCCGATCAAGATTCCTTTCCGGTTCTTCCGGTAAACTCCACCGTGTGCTCTCGGTTAAGCCAGTTTCTGCTTCTTCGTCTTCATCTTTCAAGGTTGAAGCTAAGAAAGGAGAATGGTTGCCTGGTCTCCCATCTCCGGCGTACTTAAACGGCAGGTAATTTTCACCTTCCTAATTTGCTTTGTAAATTTGTAAAATTGGGTTTTCTCTAATCCAATTCTTTAATCGAAATACAGTCTTCCCGGTGACAATGGATTTGACCCATTGGGATTAGCGGAAGACCCAGAGAATTTGAGGTGGTTTGTTCAAGCGGAGCTGGTGAATGGGCGGTGGGCGATGCTGGGTGTCGCAGGAATGCTTCTACCGGAAGTTTTCACGAAGATTGGAATCATCAACGCCCCTCAATGGTACGACGCCGGAAAGGCAGAGTACTTCGCCTCGTCGTCAACTCTGTTCGTAATCGAGTTTATCCTCTTCCATTACGTCGAAATCCGAAGATGGCAAGACATTAAAAACCCTGGCTGTGTTAACCAAGACCCCATTTTTAAGCAATACAGTTTGCCACCAAATGAATGTGGTTACCCTGGTGGGATTTTCAATCCCCTGAATTTCGCTCCAACTCTCGAAGCTAAAGAGAAGGAACTAGCCAATGGTAAGCGTCATTGAATATGGTTGACTCTTAATGACCGTCGTGAACTCGAGATACTTTCACAGTTTCTTATTTGTGAATTGATGTGTGTTTTGTTGTTTGGTATAGGGAGACTTGCGATGTTGGCGTTTTTGGGGTTCATAGTGCAACACAATGTGACAGGCAAAGGGCCATTTGACAATCTTTTGCAACACATCTCAGACCCATGGCACAACACCATTGTCCAGACATTTGGTGGCAACTAAGTTTGGTTTGTTTGGAAGGTTGTTGTTGTTGTTGTATTAAGAGTAAAAATGGTTGATATGAACTGAGATACTTTCGAGAGTATGTTTTTGGAGTGTGGTGTTGCTAATGGAATTTGTAATATGCAACAACATAGTGGAATATCAGTGTACAGAAGGTGGAGGGGCTTGTCATTGTAGCTTGGATGTTGTTCTTTAAATGACATGAATTTGGCTCTTGCAGCTTCCTTCAACTTTCACATCTTTAATCATGTTGAAACTTAAACCACTAACTTGGGAATTCTACACTCAAGCT

mRNA sequence

CCGACCGATTTGTAGCCGTTAGATCGTGAAAATCTCGTAAATCAACCCTCAGATTTGAACAGCGAACAAGAACCACAGACTCAACATTGAAGTGAAGTTACAAAGCCTTGCAAATTAGTTCTCAATTTCTTACTCCTGAAAACCCATTTTCTTCCTCAATCCAAAAAGATCATTCAGGAGAAATGGCCACCGTCACCACTCAAGCTTCTGCCGCCGTTTTCCGGCCATGTGCCGCCCGATCAAGATTCCTTTCCGGTTCTTCCGGTAAACTCCACCGTGTGCTCTCGGTTAAGCCAGTTTCTGCTTCTTCGTCTTCATCTTTCAAGGTTGAAGCTAAGAAAGGAGAATGGTTGCCTGGTCTCCCATCTCCGGCGTACTTAAACGGCAGTCTTCCCGGTGACAATGGATTTGACCCATTGGGATTAGCGGAAGACCCAGAGAATTTGAGGTGGTTTGTTCAAGCGGAGCTGGTGAATGGGCGGTGGGCGATGCTGGGTGTCGCAGGAATGCTTCTACCGGAAGTTTTCACGAAGATTGGAATCATCAACGCCCCTCAATGGTACGACGCCGGAAAGGCAGAGTACTTCGCCTCGTCGTCAACTCTGTTCGTAATCGAGTTTATCCTCTTCCATTACGTCGAAATCCGAAGATGGCAAGACATTAAAAACCCTGGCTGTGTTAACCAAGACCCCATTTTTAAGCAATACAGTTTGCCACCAAATGAATGTGGTTACCCTGGTGGGATTTTCAATCCCCTGAATTTCGCTCCAACTCTCGAAGCTAAAGAGAAGGAACTAGCCAATGGGAGACTTGCGATGTTGGCGTTTTTGGGGTTCATAGTGCAACACAATGTGACAGGCAAAGGGCCATTTGACAATCTTTTGCAACACATCTCAGACCCATGGCACAACACCATTGTCCAGACATTTGGTGGCAACTAAGTTTGGTTTGTTTGGAAGGTTGTTGTTGTTGTTGTATTAAGAGTAAAAATGGTTGATATGAACTGAGATACTTTCGAGAGTATGTTTTTGGAGTGTGGTGTTGCTAATGGAATTTGTAATATGCAACAACATAGTGGAATATCAGTGTACAGAAGGTGGAGGGGCTTGTCATTGTAGCTTGGATGTTGTTCTTTAAATGACATGAATTTGGCTCTTGCAGCTTCCTTCAACTTTCACATCTTTAATCATGTTGAAACTTAAACCACTAACTTGGGAATTCTACACTCAAGCT

Coding sequence (CDS)

ATGGCCACCGTCACCACTCAAGCTTCTGCCGCCGTTTTCCGGCCATGTGCCGCCCGATCAAGATTCCTTTCCGGTTCTTCCGGTAAACTCCACCGTGTGCTCTCGGTTAAGCCAGTTTCTGCTTCTTCGTCTTCATCTTTCAAGGTTGAAGCTAAGAAAGGAGAATGGTTGCCTGGTCTCCCATCTCCGGCGTACTTAAACGGCAGTCTTCCCGGTGACAATGGATTTGACCCATTGGGATTAGCGGAAGACCCAGAGAATTTGAGGTGGTTTGTTCAAGCGGAGCTGGTGAATGGGCGGTGGGCGATGCTGGGTGTCGCAGGAATGCTTCTACCGGAAGTTTTCACGAAGATTGGAATCATCAACGCCCCTCAATGGTACGACGCCGGAAAGGCAGAGTACTTCGCCTCGTCGTCAACTCTGTTCGTAATCGAGTTTATCCTCTTCCATTACGTCGAAATCCGAAGATGGCAAGACATTAAAAACCCTGGCTGTGTTAACCAAGACCCCATTTTTAAGCAATACAGTTTGCCACCAAATGAATGTGGTTACCCTGGTGGGATTTTCAATCCCCTGAATTTCGCTCCAACTCTCGAAGCTAAAGAGAAGGAACTAGCCAATGGGAGACTTGCGATGTTGGCGTTTTTGGGGTTCATAGTGCAACACAATGTGACAGGCAAAGGGCCATTTGACAATCTTTTGCAACACATCTCAGACCCATGGCACAACACCATTGTCCAGACATTTGGTGGCAACTAA

Protein sequence

MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

Homology

[Close]

BLAST of IVF0021969 vs. ExPASy Swiss-Prot
Match: Q9SQL2 (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 1.7e-129
Identity = 220/252 (87.30%), Postives = 230/252 (91.27%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAA+F PC  +SRFL GSSGKL+R ++ +PV  S S+SFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGL 60

Query: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
            SP YL GSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT IGI
Sbjct: 61  ASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           IN P+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPG VNQDPIFKQYSLP  
Sbjct: 121 INVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAG 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240
           E GYPGGIFNPLNFAPTLEAKEKE+ANGRLAMLAFLGFI+QHNVTGKGPFDNLLQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDP 240

Query: 241 WHNTIVQTFGGN 253
           WHNTIVQT GGN
Sbjct: 241 WHNTIVQTLGGN 252

[Close]

BLAST of IVF0021969 vs. ExPASy Swiss-Prot
Match: P27521 (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 3.2e-125
Identity = 213/250 (85.20%), Postives = 230/250 (92.00%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPV-SASSSSSFKVEAKKGEWLPG 60
           MATVTT ASA++FRPC ++ RFL+GSSG+L+R LS   + S++ +SSFKVEAKKGEWLPG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 61  LPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120
           L SP YL GSL GDNGFDPLGLAEDPENL+WFVQAELVNGRWAMLGVAGMLLPEVFTKIG
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 121 IINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPP 180
           IIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLP 
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 181 NECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISD 240
            E GYPGGIFNPLNFAPT EAKEKELANGRLAMLAFLGF+VQHNVTGKGPF+NLLQH+SD
Sbjct: 181 GEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSD 240

Query: 241 PWHNTIVQTF 250
           PWHNTIVQTF
Sbjct: 241 PWHNTIVQTF 250

[Close]

BLAST of IVF0021969 vs. ExPASy Swiss-Prot
Match: Q36718 (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare OX=4513 GN=LHC Ib-20 PE=1 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.3e-89
Identity = 154/200 (77.00%), Postives = 171/200 (85.50%), Query Frame = 0


Query: 53  KGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLP 112
           KG WLPGL SPAYL+GSL GDNGFDPL LAEDPE+LRWFVQA++VNGRWAMLGVAGML+P
Sbjct: 33  KGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIP 92

Query: 113 EVFTKIGIINAPQWYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPI 172
           EV TK G++NAP+W    GK  YFASSST   +  +   YVEIRRWQDIKNPG VNQDPI
Sbjct: 93  EVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTYVEIRRWQDIKNPGSVNQDPI 152

Query: 173 FKQYSLPPNECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFD 232
           FK YSLPP+ECGYPG +FNPLNFAP LE KEKELANGRLAMLAFLGF+VQHNV GKGPF+
Sbjct: 153 FKSYSLPPHECGYPGRVFNPLNFAP-LENKEKELANGRLAMLAFLGFLVQHNVHGKGPFE 212

Query: 233 NLLQHISDPWHNTIVQTFGG 252
           NL QH++DPWHNTI+QT  G
Sbjct: 213 NLQQHLADPWHNTIIQTISG 230

[Close]

BLAST of IVF0021969 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.0e-62
Identity = 116/239 (48.54%), Postives = 151/239 (63.18%), Query Frame = 0


Query: 17  AARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGF 76
           A ++ FL G   ++ + ++     + + S+   +  +  W PG   P +L+GSLPGD GF
Sbjct: 29  ATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGF 88

Query: 77  DPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFA 136
           DPLGL  DPE+L+W  QAELV+ RWAMLG AG+ +PE  TKIG++N P WY AG+ EYF 
Sbjct: 89  DPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFT 148

Query: 137 SSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF- 196
            ++TLFVIE +L  + E RRW DI  PGCVN DPIF    L   + GYPGG+ F+PL + 
Sbjct: 149 DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 208

Query: 197 ----APTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF 250
               A   E + KE+ NGRLAMLA +G   QH  TG GP DNL  H++DP H TI   F
Sbjct: 209 SGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAF 267

[Close]

BLAST of IVF0021969 vs. ExPASy Swiss-Prot
Match: P10708 (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB7 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-62
Identity = 115/237 (48.52%), Postives = 151/237 (63.71%), Query Frame = 0


Query: 19  RSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDP 78
           ++ FL G   ++ +  +     ++++     +  +  W PG   P +L+GSLPGD GFDP
Sbjct: 31  KASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDP 90

Query: 79  LGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASS 138
           LGLA DPE+LRW  QAELV+ RWAMLG AG+ +PE+ TKIGI+N P WY AG+ EYF  +
Sbjct: 91  LGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDT 150

Query: 139 STLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF--- 198
           +TLF++E +L  + E RRW DI  PGCVN DPIF    L   + GYPGG+ F+PL +   
Sbjct: 151 TTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSG 210

Query: 199 --APTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF 250
             A   E + KE+ NGRLAMLA +G   QH  TG GP DNL  H++DP H TI   F
Sbjct: 211 SPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAF 267

[Close]

BLAST of IVF0021969 vs. ExPASy TrEMBL
Match: A0A5A7UWR2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002520 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 7.7e-146
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240
           ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240

Query: 241 WHNTIVQTFGGN 253
           WHNTIVQTFGGN
Sbjct: 241 WHNTIVQTFGGN 252

[Close]

BLAST of IVF0021969 vs. ExPASy TrEMBL
Match: A0A1S3BV45 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493999 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 7.7e-146
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240
           ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240

Query: 241 WHNTIVQTFGGN 253
           WHNTIVQTFGGN
Sbjct: 241 WHNTIVQTFGGN 252

[Close]

BLAST of IVF0021969 vs. ExPASy TrEMBL
Match: A0A0A0LSB4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G009810 PE=3 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 9.4e-144
Identity = 248/252 (98.41%), Postives = 250/252 (99.21%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFLSGSSGKL RVLSVKPVSASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240
           ECGYPGGIFNPLNFAPTLEAKEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240

Query: 241 WHNTIVQTFGGN 253
           WHNTIVQTFGGN
Sbjct: 241 WHNTIVQTFGGN 252

[Close]

BLAST of IVF0021969 vs. ExPASy TrEMBL
Match: A0A6J1JG60 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111484821 PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.4e-139
Identity = 242/252 (96.03%), Postives = 247/252 (98.02%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFL+GSSGKLHR+LSVKPV+ASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVAASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSPAYLNGSLPGDNGFDPL LAEDPENL+WFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240
           E GYPGGIFNPLNFAPT EAKEKELANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240

Query: 241 WHNTIVQTFGGN 253
           WHNTIVQTF GN
Sbjct: 241 WHNTIVQTFSGN 252

[Close]

BLAST of IVF0021969 vs. ExPASy TrEMBL
Match: A0A6J1E151 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111429846 PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.4e-139
Identity = 242/252 (96.03%), Postives = 247/252 (98.02%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFL+GSSGKLHR+LSVKPV+ASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSPAYLNGSLPGDNGFDPL LAEDPENL+WFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240
           E GYPGGIFNPLNFAPT EAKEKELANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240

Query: 241 WHNTIVQTFGGN 253
           WHNTIVQTF GN
Sbjct: 241 WHNTIVQTFSGN 252

[Close]

BLAST of IVF0021969 vs. NCBI nr
Match: XP_008453211.1 (PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo] >KAA0057949.1 chlorophyll a-b binding protein P4 [Cucumis melo var. makuwa])

HSP 1 Score: 521 bits (1342), Expect = 9.38e-187
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240
           ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTFGGN
Sbjct: 241 WHNTIVQTFGGN 252

[Close]

BLAST of IVF0021969 vs. NCBI nr
Match: XP_038880569.1 (chlorophyll a-b binding protein P4, chloroplastic [Benincasa hispida])

HSP 1 Score: 518 bits (1334), Expect = 1.56e-185
Identity = 250/252 (99.21%), Postives = 251/252 (99.60%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFLSGSSGKLHR LSVKPVSASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240
           ECGYPGGIFNPLNFAPTLEAKEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTFGGN
Sbjct: 241 WHNTIVQTFGGN 252

[Close]

BLAST of IVF0021969 vs. NCBI nr
Match: XP_004138171.1 (chlorophyll a-b binding protein P4, chloroplastic [Cucumis sativus] >KGN63677.1 hypothetical protein Csa_013519 [Cucumis sativus])

HSP 1 Score: 514 bits (1324), Expect = 5.21e-184
Identity = 248/252 (98.41%), Postives = 250/252 (99.21%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFLSGSSGKL RVLSVKPVSASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLQRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPMYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240
           ECGYPGGIFNPLNFAPTLEAKEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTFGGN
Sbjct: 241 WHNTIVQTFGGN 252

[Close]

BLAST of IVF0021969 vs. NCBI nr
Match: XP_023516219.1 (chlorophyll a-b binding protein P4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501 bits (1291), Expect = 5.60e-179
Identity = 243/252 (96.43%), Postives = 247/252 (98.02%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFL+GSSGKLHR+LSVKPV+ASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVAASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSPAYLNGSLPGDNGFDPL LAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240
           E GYPGGIFNPLNFAPT EAKEKELANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTF GN
Sbjct: 241 WHNTIVQTFSGN 252

[Close]

BLAST of IVF0021969 vs. NCBI nr
Match: XP_022921659.1 (chlorophyll a-b binding protein 4, chloroplastic [Cucurbita moschata] >KAG6589513.1 Chlorophyll a-b binding protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023200.1 Chlorophyll a-b binding protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 500 bits (1288), Expect = 1.61e-178
Identity = 242/252 (96.03%), Postives = 247/252 (98.02%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCAARSRFL+GSSGKLHR+LSVKPV+ASSSSSFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSPAYLNGSLPGDNGFDPL LAEDPENL+WFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240
           E GYPGGIFNPLNFAPT EAKEKELANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTF GN
Sbjct: 241 WHNTIVQTFSGN 252

[Close]

BLAST of IVF0021969 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 449.1 bits (1154), Expect = 2.3e-126
Identity = 213/250 (85.20%), Postives = 230/250 (92.00%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPV-SASSSSSFKVEAKKGEWLPG 60
           MATVTT ASA++FRPC ++ RFL+GSSG+L+R LS   + S++ +SSFKVEAKKGEWLPG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 61  LPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120
           L SP YL GSL GDNGFDPLGLAEDPENL+WFVQAELVNGRWAMLGVAGMLLPEVFTKIG
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 121 IINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPP 180
           IIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLP 
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 181 NECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISD 240
            E GYPGGIFNPLNFAPT EAKEKELANGRLAMLAFLGF+VQHNVTGKGPF+NLLQH+SD
Sbjct: 181 GEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSD 240

Query: 241 PWHNTIVQTF 250
           PWHNTIVQTF
Sbjct: 241 PWHNTIVQTF 250

[Close]

BLAST of IVF0021969 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 239.2 bits (609), Expect = 3.6e-63
Identity = 124/252 (49.21%), Postives = 155/252 (61.51%), Query Frame = 0


Query: 6   TQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGE--WLPGLPSP 65
           + A AA+  P      FL G   +L + L+V  VS   +S   V A      W PG   P
Sbjct: 8   SSAIAAISSP-----SFLGGKKLRLKKKLTVPAVSRPDASVRAVAADPDRPIWFPGSTPP 67

Query: 66  AYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINA 125
            +L+GSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAMLG AG+ +PE  TKIGI+N 
Sbjct: 68  EWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNT 127

Query: 126 PQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECG 185
           P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PG VN DP+F    L   + G
Sbjct: 128 PSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFPNNKLTGTDVG 187

Query: 186 YPGGI-FNPLNF-----APTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHI 245
           YPGG+ F+PL +     A   E + KE+ NGRLAMLA +G   QH  TG GP DNL  H+
Sbjct: 188 YPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHL 247

Query: 246 SDPWHNTIVQTF 250
           +DP H TI   F
Sbjct: 248 ADPGHATIFAAF 254

[Close]

BLAST of IVF0021969 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-56
Identity = 112/232 (48.28%), Postives = 152/232 (65.52%), Query Frame = 0


Query: 26  SSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDP 85
           SS    R+ SVK      + +  VE  +  WLPGL  P YL+G+L GD GFDPLGL EDP
Sbjct: 21  SSVITRRISSVKAAGGGINPTVAVE--RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDP 80

Query: 86  ENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEY-FASSSTLFVI 145
           E+L+W+VQAELV+ R+AMLGVAG+L  ++    GI N P WY+AG  ++ FAS+ TL V+
Sbjct: 81  ESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVV 140

Query: 146 EFILFHYVEIRRWQDIKNPGCVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA 205
           +F+L  + E +R+ D  +PG   ++  F    + +L   E GYPGG + NPL  A  ++ 
Sbjct: 141 QFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQN 200

Query: 206 ----KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQT 249
               K KE+ NGRLAM+A LGF VQ +VT  GP DNL++H+S+PWH TI+QT
Sbjct: 201 AHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQT 250

[Close]

BLAST of IVF0021969 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-56
Identity = 112/232 (48.28%), Postives = 152/232 (65.52%), Query Frame = 0


Query: 26  SSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDP 85
           SS    R+ SVK      + +  VE  +  WLPGL  P YL+G+L GD GFDPLGL EDP
Sbjct: 21  SSVITRRISSVKAAGGGINPTVAVE--RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDP 80

Query: 86  ENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEY-FASSSTLFVI 145
           E+L+W+VQAELV+ R+AMLGVAG+L  ++    GI N P WY+AG  ++ FAS+ TL V+
Sbjct: 81  ESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVV 140

Query: 146 EFILFHYVEIRRWQDIKNPGCVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA 205
           +F+L  + E +R+ D  +PG   ++  F    + +L   E GYPGG + NPL  A  ++ 
Sbjct: 141 QFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQN 200

Query: 206 ----KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQT 249
               K KE+ NGRLAM+A LGF VQ +VT  GP DNL++H+S+PWH TI+QT
Sbjct: 201 AHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQT 250

[Close]

BLAST of IVF0021969 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 208.0 bits (528), Expect = 8.9e-54
Identity = 106/259 (40.93%), Postives = 148/259 (57.14%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCAARSRFLSGSS--GKL--HRVLSVKPVSASSSSSFKVEAKKGEW 60
           + +  T +++ V  P   R    S SS  G+L   R++ V+     SS    +   +  W
Sbjct: 9   LTSTLTLSTSRVQNPTQRRPHVASTSSTGGRLMRERLVVVRAGKEVSSVCEPLPPDRPLW 68

Query: 61  LPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT 120
            PG   P +L+GSLPGD GFDPLGL  DP+ L+WF QAEL++ RWAML V G+++PE   
Sbjct: 69  FPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLE 128

Query: 121 KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYS 180
           ++G I    WYDAG  EYFA S+TLFV + +L  + E RRW D+  PG V+ +P +    
Sbjct: 129 RLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYPHKV 188

Query: 181 LPPNECGYPGGIFNPLNF------APTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPF 240
            P  + GYPGG++            P +  + KE+ NGRLAMLAFLGF  Q   T + P 
Sbjct: 189 NPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQATYTSQDPI 248

Query: 241 DNLLQHISDPWHNTIVQTF 250
           +NL+ H++DP H  +   F
Sbjct: 249 ENLMAHLADPGHCNVFSAF 267

The following BLAST results are available for this feature:

BLAST of IVF0021969 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQL2	1.7e-129	87.30	Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lh...	[more]
P27521	3.2e-125	85.20	Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q36718	1.3e-89	77.00	Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulga...	[more]
P13869	1.0e-62	48.54	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]
P10708	1.3e-62	48.52	Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081...	[more]

BLAST of IVF0021969 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UWR2	7.7e-146	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BV45	7.7e-146	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0LSB4	9.4e-144	98.41	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1JG60	1.4e-139	96.03	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1E151	1.4e-139	96.03	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of IVF0021969 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453211.1	9.38e-187	100.00	PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo] >KAA...	[more]
XP_038880569.1	1.56e-185	99.21	chlorophyll a-b binding protein P4, chloroplastic [Benincasa hispida]	[more]
XP_004138171.1	5.21e-184	98.41	chlorophyll a-b binding protein P4, chloroplastic [Cucumis sativus] >KGN63677.1 ...	[more]
XP_023516219.1	5.60e-179	96.43	chlorophyll a-b binding protein P4, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022921659.1	1.61e-178	96.03	chlorophyll a-b binding protein 4, chloroplastic [Cucurbita moschata] >KAG658951...	[more]

BLAST of IVF0021969 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47470.1	2.3e-126	85.20	light-harvesting chlorophyll-protein complex I subunit A4	[more]
AT3G61470.1	3.6e-63	49.21	photosystem I light harvesting complex gene 2	[more]
AT1G45474.1	1.1e-56	48.28	photosystem I light harvesting complex gene 5	[more]
AT1G45474.2	1.1e-56	48.28	photosystem I light harvesting complex gene 5	[more]
AT1G19150.1	8.9e-54	40.93	photosystem I light harvesting complex gene 6	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 63..242 e-value: 3.8E-67 score: 227.8
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 63..222 e-value: 6.8E-48 score: 163.2
None	No IPR available	PANTHER	PTHR21649:SF109	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 1..252
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 53..249
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0021969.1	IVF0021969.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009409	response to cold
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009645	response to low light intensity stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019904	protein domain specific binding