IVF0021923 (gene) Melon (IVF77) v1

Overview
NameIVF0021923
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionU-box domain-containing protein 35-like
Locationchr12: 14229750 .. 14230942 (-)
RNA-Seq ExpressionIVF0021923
SyntenyIVF0021923
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGCTTCCGAAGGAGGTGTTTACTTCGGCACTGATGATTTCCTATTAGATCCAAGTTTAAGCGCGAATGAAGATGAGGAATCGAGCGAGCTGTTCGAGATTGAGCTAGGGATTGAGGCACGATCCAATCGTAAACAGGAGGATGAATGCGCGGAAAGTTGGTTCTCCTTTGATTTCCGCAAATCAAACCATTTCGTTTACGTTGGGATTAGCGATAACTTCGATTCCAGTATGGACGCCTTGCAATGGACTCTCCATTTCGCTGTTTTACCCTCCACTATCGTTTATCTCTTTCACGTCTTCCCCGAGATTCGCTTCATTCCCAGCCCATGTATGTCCTCTCTCTCTCTCTCTAACAGAATTCTTTCAGAATTGAAATAGCTTGATGCAAATAAAAACAAACTCTTTTTATGCAATTTAAATAATCTGCAGAAAGAAAAAAGATGTTCTATTTTGTTATCAATGGCAGAGAAGAACCAATTTCAACTAACTAAAGTTTTTGCTTTCATGTTTTGTCATACAGTGGGAATGCTTCCGAGGAGCCAGGTTAGTCCTAAGCTAGTGGAAAAGTTCAGGACTGAAGAGAGAGCAAAAAGGAGGATGTTTCTTCAAAAGTTTGTTGATAAATGTTCGGCTGTTCAGGTATATATCATCAGCAGATTACATTCTACATTCTATGCATTTCAGTTCTTCGATTTTATGACCAAGTTCTTTACAATACAATTTCACTAACATTTTACAGGTCAGTGTGGAGGTTGTGATGATTGAGAGTGATATGGTGTCAAGGGCAATCCTTGATCTTATCGCTCTTTTCCAAATAAAGAAACTCATACTAGGGAGCTCCAAACCCAGGTCTCTCTCTCTCTCTCTAGACAAACTTACTGATCTTCAGTTCAAAACTCAAATGTGCAAATGTCTTAAATCTCCGGGCTGAATTTTTTAATTTGGAACCTAGAAGAAAATGGAGATCTAAGGGAGGAAAAGGGATAGCCAGACATGTACTGCAAAATGCAGAAGAATTCTGTGATGTGAAAATCATATGTGAAGGAAAGGAATCCACCAACACCTACCAAGCTATTGAGTCGCCATCGTCATCTTCATCGTCGCACACCACCTCCTCTCCAAATTTTAATGACAAGAATATCCATTTCAAAAGAGTGGAGAATGAATATCCACGCAGTAGTTCTTAA

mRNA sequence

ATGTTGGCTTCCGAAGGAGGTGTTTACTTCGGCACTGATGATTTCCTATTAGATCCAAGTTTAAGCGCGAATGAAGATGAGGAATCGAGCGAGCTGTTCGAGATTGAGCTAGGGATTGAGGCACGATCCAATCGTAAACAGGAGGATGAATGCGCGGAAAGTTGGTTCTCCTTTGATTTCCGCAAATCAAACCATTTCGTTTACGTTGGGATTAGCGATAACTTCGATTCCAGTATGGACGCCTTGCAATGGACTCTCCATTTCGCTGTTTTACCCTCCACTATCGTTTATCTCTTTCACGTCTTCCCCGAGATTCGCTTCATTCCCAGCCCATTGGGAATGCTTCCGAGGAGCCAGGTTAGTCCTAAGCTAGTGGAAAAGTTCAGGACTGAAGAGAGAGCAAAAAGGAGGATGTTTCTTCAAAAGTTTGTTGATAAATGTTCGGCTGTTCAGGTCAGTGTGGAGGTTGTGATGATTGAGAGTGATATGGTGTCAAGGGCAATCCTTGATCTTATCGCTCTTTTCCAAATAAAGAAACTCATACTAGGGAGCTCCAAACCCAGATCTAAGGGAGGAAAAGGGATAGCCAGACATGTACTGCAAAATGCAGAAGAATTCTGTGATGTGAAAATCATATGTGAAGGAAAGGAATCCACCAACACCTACCAAGCTATTGAGTCGCCATCGTCATCTTCATCGTCGCACACCACCTCCTCTCCAAATTTTAATGACAAGAATATCCATTTCAAAAGAGTGGAGAATGAATATCCACGCAGTAGTTCTTAA

Coding sequence (CDS)

ATGTTGGCTTCCGAAGGAGGTGTTTACTTCGGCACTGATGATTTCCTATTAGATCCAAGTTTAAGCGCGAATGAAGATGAGGAATCGAGCGAGCTGTTCGAGATTGAGCTAGGGATTGAGGCACGATCCAATCGTAAACAGGAGGATGAATGCGCGGAAAGTTGGTTCTCCTTTGATTTCCGCAAATCAAACCATTTCGTTTACGTTGGGATTAGCGATAACTTCGATTCCAGTATGGACGCCTTGCAATGGACTCTCCATTTCGCTGTTTTACCCTCCACTATCGTTTATCTCTTTCACGTCTTCCCCGAGATTCGCTTCATTCCCAGCCCATTGGGAATGCTTCCGAGGAGCCAGGTTAGTCCTAAGCTAGTGGAAAAGTTCAGGACTGAAGAGAGAGCAAAAAGGAGGATGTTTCTTCAAAAGTTTGTTGATAAATGTTCGGCTGTTCAGGTCAGTGTGGAGGTTGTGATGATTGAGAGTGATATGGTGTCAAGGGCAATCCTTGATCTTATCGCTCTTTTCCAAATAAAGAAACTCATACTAGGGAGCTCCAAACCCAGATCTAAGGGAGGAAAAGGGATAGCCAGACATGTACTGCAAAATGCAGAAGAATTCTGTGATGTGAAAATCATATGTGAAGGAAAGGAATCCACCAACACCTACCAAGCTATTGAGTCGCCATCGTCATCTTCATCGTCGCACACCACCTCCTCTCCAAATTTTAATGACAAGAATATCCATTTCAAAAGAGTGGAGAATGAATATCCACGCAGTAGTTCTTAA

Protein sequence

MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDFRKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQVSPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKLILGSSKPRSKGGKGIARHVLQNAEEFCDVKIICEGKESTNTYQAIESPSSSSSSHTTSSPNFNDKNIHFKRVENEYPRSSS
Homology
BLAST of IVF0021923 vs. ExPASy Swiss-Prot
Match: Q9SW11 (U-box domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=PUB35 PE=2 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 8.5e-04
Identity = 50/196 (25.51%), Postives = 85/196 (43.37%), Query Frame = 0

Query: 67  VYVGISDNFDSSMDALQWTLH-FAVLPSTIVYLFHVFPEIRFIPSPLG-MLPRSQVSPKL 126
           V V +S +   S   + W +  FA   +    L H+ P I  +P+P+G  +P S+V   +
Sbjct: 22  VVVALSGS-SKSKYVVTWAIEKFATEGNVGFKLLHIHPMITSVPTPMGNAIPISEVRDDV 81

Query: 127 VEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKLILGS 186
           V  +R E   +    L+ +       +V+VEV++IESD V+ AI + +    I ++++G 
Sbjct: 82  VTAYRQEILWQSEEMLKPYTKLFVRRKVAVEVLVIESDNVAAAIAEEVTRDSIDRIVIGG 141

Query: 187 SKPRSKGGKG-IARHVLQNAEEFCDVKIICEGK--------------------ESTNTYQ 240
           S       K  I   +      FC V ++ +GK                    E TN+  
Sbjct: 142 SSRSFFSRKADICSVISALMPNFCTVYVVSKGKLSCVRPSDSDGNATIREDGSERTNSSS 201

BLAST of IVF0021923 vs. ExPASy TrEMBL
Match: A0A1S3CLA7 (U-box domain-containing protein 35-like OS=Cucumis melo OX=3656 GN=LOC103502223 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 6.8e-137
Identity = 260/263 (98.86%), Postives = 260/263 (98.86%), Query Frame = 0

Query: 1   MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDF 60
           MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDF
Sbjct: 1   MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDF 60

Query: 61  RKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQV 120
           RKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQV
Sbjct: 61  RKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQV 120

Query: 121 SPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKL 180
           SPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKL
Sbjct: 121 SPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKL 180

Query: 181 ILGSSKP---RSKGGKGIARHVLQNAEEFCDVKIICEGKESTNTYQAIESPSSSSSSHTT 240
           ILGSSKP   RSKGGKGIARHVLQNAEEFCDVKIICEGKESTNTYQAIESPSSSSSSHTT
Sbjct: 181 ILGSSKPRKWRSKGGKGIARHVLQNAEEFCDVKIICEGKESTNTYQAIESPSSSSSSHTT 240

Query: 241 SSPNFNDKNIHFKRVENEYPRSS 261
           SSPNFNDKNIHFKRVENEYPRSS
Sbjct: 241 SSPNFNDKNIHFKRVENEYPRSS 263

BLAST of IVF0021923 vs. ExPASy TrEMBL
Match: A0A0A0LVQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G175720 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 8.0e-114
Identity = 226/260 (86.92%), Postives = 233/260 (89.62%), Query Frame = 0

Query: 1   MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDF 60
           ML  EG VYFGTDDFLLDPSLSANEDEESSELFEIELGIE RSN K ED+C ESWFSFDF
Sbjct: 1   MLTLEGDVYFGTDDFLLDPSLSANEDEESSELFEIELGIEVRSNCKLEDDCGESWFSFDF 60

Query: 61  RKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQV 120
           RKSNH VYVGISDNFDSS+DALQWTLHFAVL STIVYLF VFPEIRFIPSPLGMLPRSQV
Sbjct: 61  RKSNHCVYVGISDNFDSSLDALQWTLHFAVLSSTIVYLFRVFPEIRFIPSPLGMLPRSQV 120

Query: 121 SPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKL 180
           SPK   +    +RAK+R FLQKFV+KC AVQVS EVVMIESDMVS+AILDLIALFQIKKL
Sbjct: 121 SPKW--RSSGLKRAKKREFLQKFVNKCLAVQVSGEVVMIESDMVSKAILDLIALFQIKKL 180

Query: 181 ILGSSKPRSKGGKGIARHVLQNAEEFCDVKIICEGKESTNTYQAIESPSSSSSSHTTSSP 240
           ILGSSKPRSK GKGIARHVLQNAEEF DVKIICEGK S NTYQAIESP SS SSHTTSSP
Sbjct: 181 ILGSSKPRSKRGKGIARHVLQNAEEFSDVKIICEGKGSANTYQAIESPLSSLSSHTTSSP 240

Query: 241 NFNDKNIHFKRVENEYPRSS 261
           N NDKNIHFKRVENEYPRSS
Sbjct: 241 NLNDKNIHFKRVENEYPRSS 258

BLAST of IVF0021923 vs. ExPASy TrEMBL
Match: A0A5D3CU66 (U-box domain-containing protein 35-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00730 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 5.2e-97
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0

Query: 1   MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDF 60
           MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDF
Sbjct: 1   MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDF 60

Query: 61  RKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQV 120
           RKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQV
Sbjct: 61  RKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQV 120

Query: 121 SPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKL 180
           SPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKL
Sbjct: 121 SPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKL 180

Query: 181 ILGSSKPRS 190
           ILGSSKPRS
Sbjct: 181 ILGSSKPRS 189

BLAST of IVF0021923 vs. ExPASy TrEMBL
Match: A0A6J1CMT0 (U-box domain-containing protein 35-like isoform X4 OS=Momordica charantia OX=3673 GN=LOC111012574 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.9e-83
Identity = 179/260 (68.85%), Postives = 209/260 (80.38%), Query Frame = 0

Query: 9   YFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDEC----AESWFSFDFRKSN 68
           YFG+++F  D SLS NE+  SSELFEIELGIE RSNRKQED+C      SWFSFDFRKSN
Sbjct: 18  YFGSENFQFDRSLSENEEGGSSELFEIELGIEVRSNRKQEDDCECEFEGSWFSFDFRKSN 77

Query: 69  HFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQVSPKL 128
           H VYVGI DN DSSMDAL+WTL+FAVLPST+VYL H+FPEIRF+PSPLGMLP+SQVSP+L
Sbjct: 78  HCVYVGIGDNIDSSMDALKWTLNFAVLPSTVVYLLHIFPEIRFVPSPLGMLPKSQVSPRL 137

Query: 129 VEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKLILGS 188
           VE+   EERAKR  FL+KFVD CSA +V VE VMIESDMV++AILDLI++FQI+KLILGS
Sbjct: 138 VERHMAEERAKRTEFLRKFVDTCSAAEVKVEAVMIESDMVAKAILDLISIFQIRKLILGS 197

Query: 189 SKP---RSKGGKGIARHVLQNAEEFCDVKIICEGKESTNTYQAIESPSSSSSSHTTSSPN 248
           +K    RSK G  +AR VLQNA EFCDVKIICEGKE+  TYQ IES SSSSS+    SPN
Sbjct: 198 TKTRKWRSKRG-ALARQVLQNAGEFCDVKIICEGKEA--TYQMIESSSSSSSN--ILSPN 257

Query: 249 FND-KNIHFKRVENEYPRSS 261
            +D +N   KR++ +Y  +S
Sbjct: 258 ISDNENFDIKRMQKKYRHNS 272

BLAST of IVF0021923 vs. ExPASy TrEMBL
Match: A0A6J1CM72 (U-box domain-containing protein 35-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111012574 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.5e-83
Identity = 179/261 (68.58%), Postives = 209/261 (80.08%), Query Frame = 0

Query: 9   YFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDEC----AESWFSFDFRKSN 68
           YFG+++F  D SLS NE+  SSELFEIELGIE RSNRKQED+C      SWFSFDFRKSN
Sbjct: 18  YFGSENFQFDRSLSENEEGGSSELFEIELGIEVRSNRKQEDDCECEFEGSWFSFDFRKSN 77

Query: 69  HFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQVSPKL 128
           H VYVGI DN DSSMDAL+WTL+FAVLPST+VYL H+FPEIRF+PSPLGMLP+SQVSP+L
Sbjct: 78  HCVYVGIGDNIDSSMDALKWTLNFAVLPSTVVYLLHIFPEIRFVPSPLGMLPKSQVSPRL 137

Query: 129 VEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKLILGS 188
           VE+   EERAKR  FL+KFVD CSA +V VE VMIESDMV++AILDLI++FQI+KLILGS
Sbjct: 138 VERHMAEERAKRTEFLRKFVDTCSAAEVKVEAVMIESDMVAKAILDLISIFQIRKLILGS 197

Query: 189 SKP----RSKGGKGIARHVLQNAEEFCDVKIICEGKESTNTYQAIESPSSSSSSHTTSSP 248
           +K     RSK G  +AR VLQNA EFCDVKIICEGKE+  TYQ IES SSSSS+    SP
Sbjct: 198 TKTRRKWRSKRG-ALARQVLQNAGEFCDVKIICEGKEA--TYQMIESSSSSSSN--ILSP 257

Query: 249 NFND-KNIHFKRVENEYPRSS 261
           N +D +N   KR++ +Y  +S
Sbjct: 258 NISDNENFDIKRMQKKYRHNS 273

BLAST of IVF0021923 vs. NCBI nr
Match: XP_008464309.1 (PREDICTED: U-box domain-containing protein 35-like [Cucumis melo])

HSP 1 Score: 496 bits (1277), Expect = 2.29e-176
Identity = 260/263 (98.86%), Postives = 260/263 (98.86%), Query Frame = 0

Query: 1   MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDF 60
           MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDF
Sbjct: 1   MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDF 60

Query: 61  RKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQV 120
           RKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQV
Sbjct: 61  RKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQV 120

Query: 121 SPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKL 180
           SPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKL
Sbjct: 121 SPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKL 180

Query: 181 ILGSSKPR---SKGGKGIARHVLQNAEEFCDVKIICEGKESTNTYQAIESPSSSSSSHTT 240
           ILGSSKPR   SKGGKGIARHVLQNAEEFCDVKIICEGKESTNTYQAIESPSSSSSSHTT
Sbjct: 181 ILGSSKPRKWRSKGGKGIARHVLQNAEEFCDVKIICEGKESTNTYQAIESPSSSSSSHTT 240

Query: 241 SSPNFNDKNIHFKRVENEYPRSS 260
           SSPNFNDKNIHFKRVENEYPRSS
Sbjct: 241 SSPNFNDKNIHFKRVENEYPRSS 263

BLAST of IVF0021923 vs. NCBI nr
Match: XP_038894104.1 (U-box domain-containing protein 35-like [Benincasa hispida])

HSP 1 Score: 384 bits (985), Expect = 6.18e-132
Identity = 212/266 (79.70%), Postives = 227/266 (85.34%), Query Frame = 0

Query: 1   MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDF 60
           ML  EGG     DDFLLD SL ANEDEESSELFEIELGIE RSNRKQED+C ESWFSFDF
Sbjct: 1   MLPLEGG-----DDFLLDRSLIANEDEESSELFEIELGIEVRSNRKQEDDCEESWFSFDF 60

Query: 61  RKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQV 120
           RKSNH VYVGISDNFDSSMDALQWTL FAVLPSTIVYLFHVFPE+RF+PSPLGMLP+SQV
Sbjct: 61  RKSNHCVYVGISDNFDSSMDALQWTLDFAVLPSTIVYLFHVFPELRFVPSPLGMLPKSQV 120

Query: 121 SPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKL 180
           SPKLVEKF+ EERAKR+ FL KFVDKC A QV+VEVVMIESDMV++AILDLI+L QI+KL
Sbjct: 121 SPKLVEKFKAEERAKRKEFLHKFVDKCYAAQVNVEVVMIESDMVAKAILDLISLLQIRKL 180

Query: 181 ILGSSKPR---SKGGKGIARHVLQNAEEFCDVKIICEGKESTNTYQAIESPSSSSSSHTT 240
           ILGS+K R   S+ GKGIARHVLQNA+EFCDVKIICEGKEST  YQAIES SSSSSS  T
Sbjct: 181 ILGSTKARKWRSRRGKGIARHVLQNAQEFCDVKIICEGKEST--YQAIESSSSSSSSSHT 240

Query: 241 SSPNFNDKNIHFK----RVENEYPRS 259
            SPN +DKNIHFK      E EY RS
Sbjct: 241 PSPNLSDKNIHFKSHFKNTEKEYHRS 259

BLAST of IVF0021923 vs. NCBI nr
Match: KAA0042368.1 (U-box domain-containing protein 35-like [Cucumis melo var. makuwa] >TYK15487.1 U-box domain-containing protein 35-like [Cucumis melo var. makuwa])

HSP 1 Score: 363 bits (931), Expect = 1.47e-124
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0

Query: 1   MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDF 60
           MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDF
Sbjct: 1   MLASEGGVYFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECAESWFSFDF 60

Query: 61  RKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQV 120
           RKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQV
Sbjct: 61  RKSNHFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQV 120

Query: 121 SPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKL 180
           SPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKL
Sbjct: 121 SPKLVEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKL 180

Query: 181 ILGSSKPRS 189
           ILGSSKPRS
Sbjct: 181 ILGSSKPRS 189

BLAST of IVF0021923 vs. NCBI nr
Match: XP_022142447.1 (U-box domain-containing protein 35-like isoform X4 [Momordica charantia])

HSP 1 Score: 318 bits (814), Expect = 9.41e-106
Identity = 179/260 (68.85%), Postives = 209/260 (80.38%), Query Frame = 0

Query: 9   YFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECA----ESWFSFDFRKSN 68
           YFG+++F  D SLS NE+  SSELFEIELGIE RSNRKQED+C      SWFSFDFRKSN
Sbjct: 18  YFGSENFQFDRSLSENEEGGSSELFEIELGIEVRSNRKQEDDCECEFEGSWFSFDFRKSN 77

Query: 69  HFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQVSPKL 128
           H VYVGI DN DSSMDAL+WTL+FAVLPST+VYL H+FPEIRF+PSPLGMLP+SQVSP+L
Sbjct: 78  HCVYVGIGDNIDSSMDALKWTLNFAVLPSTVVYLLHIFPEIRFVPSPLGMLPKSQVSPRL 137

Query: 129 VEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKLILGS 188
           VE+   EERAKR  FL+KFVD CSA +V VE VMIESDMV++AILDLI++FQI+KLILGS
Sbjct: 138 VERHMAEERAKRTEFLRKFVDTCSAAEVKVEAVMIESDMVAKAILDLISIFQIRKLILGS 197

Query: 189 SKPR---SKGGKGIARHVLQNAEEFCDVKIICEGKESTNTYQAIESPSSSSSSHTTSSPN 248
           +K R   SK G  +AR VLQNA EFCDVKIICEGKE+T  YQ IES SSSSS+    SPN
Sbjct: 198 TKTRKWRSKRG-ALARQVLQNAGEFCDVKIICEGKEAT--YQMIESSSSSSSN--ILSPN 257

Query: 249 FND-KNIHFKRVENEYPRSS 260
            +D +N   KR++ +Y  +S
Sbjct: 258 ISDNENFDIKRMQKKYRHNS 272

BLAST of IVF0021923 vs. NCBI nr
Match: XP_022142446.1 (U-box domain-containing protein 35-like isoform X3 [Momordica charantia])

HSP 1 Score: 317 bits (813), Expect = 1.38e-105
Identity = 179/261 (68.58%), Postives = 209/261 (80.08%), Query Frame = 0

Query: 9   YFGTDDFLLDPSLSANEDEESSELFEIELGIEARSNRKQEDECA----ESWFSFDFRKSN 68
           YFG+++F  D SLS NE+  SSELFEIELGIE RSNRKQED+C      SWFSFDFRKSN
Sbjct: 18  YFGSENFQFDRSLSENEEGGSSELFEIELGIEVRSNRKQEDDCECEFEGSWFSFDFRKSN 77

Query: 69  HFVYVGISDNFDSSMDALQWTLHFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQVSPKL 128
           H VYVGI DN DSSMDAL+WTL+FAVLPST+VYL H+FPEIRF+PSPLGMLP+SQVSP+L
Sbjct: 78  HCVYVGIGDNIDSSMDALKWTLNFAVLPSTVVYLLHIFPEIRFVPSPLGMLPKSQVSPRL 137

Query: 129 VEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKLILGS 188
           VE+   EERAKR  FL+KFVD CSA +V VE VMIESDMV++AILDLI++FQI+KLILGS
Sbjct: 138 VERHMAEERAKRTEFLRKFVDTCSAAEVKVEAVMIESDMVAKAILDLISIFQIRKLILGS 197

Query: 189 SKPR----SKGGKGIARHVLQNAEEFCDVKIICEGKESTNTYQAIESPSSSSSSHTTSSP 248
           +K R    SK G  +AR VLQNA EFCDVKIICEGKE+T  YQ IES SSSSS+    SP
Sbjct: 198 TKTRRKWRSKRG-ALARQVLQNAGEFCDVKIICEGKEAT--YQMIESSSSSSSN--ILSP 257

Query: 249 NFND-KNIHFKRVENEYPRSS 260
           N +D +N   KR++ +Y  +S
Sbjct: 258 NISDNENFDIKRMQKKYRHNS 273

BLAST of IVF0021923 vs. TAIR 10
Match: AT5G47740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 129.0 bits (323), Expect = 5.4e-30
Identity = 72/173 (41.62%), Postives = 109/173 (63.01%), Query Frame = 0

Query: 67  VYVGISDNFDSSMDALQWTL-HFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQVSPKLV 126
           VYVG+    DSSM+AL+W + +     ST+++L HVFPE RFIP PLG + R + S + V
Sbjct: 45  VYVGVGKG-DSSMEALRWAIDNLMTSSSTLLFLIHVFPETRFIPYPLGRITRERASQEQV 104

Query: 127 EKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKLILGSS 186
           E F ++ER KRR  L KF+  CSA +V VE +++ESD V++A+ DLI +  I+KL+LG  
Sbjct: 105 ESFMSQEREKRRTLLLKFLHACSASKVKVETILVESDSVAKAVQDLITILNIRKLVLGID 164

Query: 187 KPRSK-----GGKGIARHVLQ-NAEEFCDVKIICEGKESTNTYQAIESPSSSS 233
           K  ++      G  +   +++ +A + C+VK+IC+GKE       +ES  + S
Sbjct: 165 KSNARKASTMKGNSVPELIMRSSAADVCEVKVICQGKEINMEQTMMESSPAKS 216

BLAST of IVF0021923 vs. TAIR 10
Match: AT5G47740.2 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 6.0e-29
Identity = 73/175 (41.71%), Postives = 109/175 (62.29%), Query Frame = 0

Query: 67  VYVGISDNFDSSMDALQWTL-HFAVLPSTIVYLFHVFPEIRFIPSPLGMLPRSQVSPKLV 126
           VYVG+    DSSM+AL+W + +     ST+++L HVFPE RFIP PLG + R + S + V
Sbjct: 45  VYVGVGKG-DSSMEALRWAIDNLMTSSSTLLFLIHVFPETRFIPYPLGRITRERASQEQV 104

Query: 127 EKFRTEERAKRRMFLQKFVDKCSA--VQVSVEVVMIESDMVSRAILDLIALFQIKKLILG 186
           E F ++ER KRR  L KF+  CSA   QV VE +++ESD V++A+ DLI +  I+KL+LG
Sbjct: 105 ESFMSQEREKRRTLLLKFLHACSASKEQVKVETILVESDSVAKAVQDLITILNIRKLVLG 164

Query: 187 SSKPRSK-----GGKGIARHVLQ-NAEEFCDVKIICEGKESTNTYQAIESPSSSS 233
             K  ++      G  +   +++ +A + C+VK+IC+GKE       +ES  + S
Sbjct: 165 IDKSNARKASTMKGNSVPELIMRSSAADVCEVKVICQGKEINMEQTMMESSPAKS 218

BLAST of IVF0021923 vs. TAIR 10
Match: AT4G25160.1 (U-box domain-containing protein kinase family protein )

HSP 1 Score: 45.8 bits (107), Expect = 6.1e-05
Identity = 50/196 (25.51%), Postives = 85/196 (43.37%), Query Frame = 0

Query: 67  VYVGISDNFDSSMDALQWTLH-FAVLPSTIVYLFHVFPEIRFIPSPLG-MLPRSQVSPKL 126
           V V +S +   S   + W +  FA   +    L H+ P I  +P+P+G  +P S+V   +
Sbjct: 22  VVVALSGS-SKSKYVVTWAIEKFATEGNVGFKLLHIHPMITSVPTPMGNAIPISEVRDDV 81

Query: 127 VEKFRTEERAKRRMFLQKFVDKCSAVQVSVEVVMIESDMVSRAILDLIALFQIKKLILGS 186
           V  +R E   +    L+ +       +V+VEV++IESD V+ AI + +    I ++++G 
Sbjct: 82  VTAYRQEILWQSEEMLKPYTKLFVRRKVAVEVLVIESDNVAAAIAEEVTRDSIDRIVIGG 141

Query: 187 SKPRSKGGKG-IARHVLQNAEEFCDVKIICEGK--------------------ESTNTYQ 240
           S       K  I   +      FC V ++ +GK                    E TN+  
Sbjct: 142 SSRSFFSRKADICSVISALMPNFCTVYVVSKGKLSCVRPSDSDGNATIREDGSERTNSSS 201

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SW118.5e-0425.51U-box domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=PUB35 PE=2... [more]
Match NameE-valueIdentityDescription
A0A1S3CLA76.8e-13798.86U-box domain-containing protein 35-like OS=Cucumis melo OX=3656 GN=LOC103502223 ... [more]
A0A0A0LVQ58.0e-11486.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G175720 PE=4 SV=1[more]
A0A5D3CU665.2e-97100.00U-box domain-containing protein 35-like OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A6J1CMT01.9e-8368.85U-box domain-containing protein 35-like isoform X4 OS=Momordica charantia OX=367... [more]
A0A6J1CM722.5e-8368.58U-box domain-containing protein 35-like isoform X3 OS=Momordica charantia OX=367... [more]
Match NameE-valueIdentityDescription
XP_008464309.12.29e-17698.86PREDICTED: U-box domain-containing protein 35-like [Cucumis melo][more]
XP_038894104.16.18e-13279.70U-box domain-containing protein 35-like [Benincasa hispida][more]
KAA0042368.11.47e-124100.00U-box domain-containing protein 35-like [Cucumis melo var. makuwa] >TYK15487.1 U... [more]
XP_022142447.19.41e-10668.85U-box domain-containing protein 35-like isoform X4 [Momordica charantia][more]
XP_022142446.11.38e-10568.58U-box domain-containing protein 35-like isoform X3 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT5G47740.15.4e-3041.62Adenine nucleotide alpha hydrolases-like superfamily protein [more]
AT5G47740.26.0e-2941.71Adenine nucleotide alpha hydrolases-like superfamily protein [more]
AT4G25160.16.1e-0525.51U-box domain-containing protein kinase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 68..212
e-value: 4.5E-9
score: 38.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..245
NoneNo IPR availablePANTHERPTHR47382U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKEcoord: 25..242
NoneNo IPR availablePANTHERPTHR47382:SF3ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEINcoord: 25..242
NoneNo IPR availableSUPERFAMILY52402Adenine nucleotide alpha hydrolases-likecoord: 73..209

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0021923.2IVF0021923.2mRNA