IVF0021820 (gene) Melon (IVF77) v1

Overview


Name	IVF0021820
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription termination factor MTEF1
Location	tig00000060: 383105 .. 384387 (-)
RNA-Seq Expression	IVF0021820
Synteny	IVF0021820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAACTTGTTTCACAGAATCATTCTACTTAGAGCTCCATCGTCAGTCTTTTCTCACGGATTTTCCGAATGTCCGTTGAAATCTCTCAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCGAAATCTGTTTCGTTGGCCTCTAATGTTGTTCAGCTCGAGAATAATGGGAAGGCTGTACGTGCGTTACTTGCGAATCATGGATTCTCTGAATCACAATTCTCTAACCTTGCCAAGAGGTATCCTCGAATTCTTTCTGCGAAGCCCGAGAAAACCCTACTGCCCAAACTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAAGTTGCCAAATTAGTATGTTCATGTCCTTATATTGTAAAAGTAAATTTAAACAAACGAATTATTCCAGCCTTTGATTACCTTCAAGCCATGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATAAAGCGCTTTGCGGGTATTCTCGCTTGGGATCTTCGAATTTCAGTTAGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGGGGCAGCCTAGACATTTCTTAACAAATTCCATCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAACTGCAGTTTGTTATTGCTGTTTCTGGTCTACGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGAAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAGAAGGCATCCGTGGTGTATGATGCTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGCGAATCATCTTTCGCTGCTAGTAGACCAATTGTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAATACGGGAATCCTGTTTCCTTCTTTGGGATTTCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCCCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATCAATGAATTCAATTTCTTGAAGATGAACAGGTTCAATCAGCATGAAAATTTAATTGTTTTGCTAAAGCTCATATCATTCACAAAGTTACCTTCCATGATCATGTGTATAGCATATTTTCTAAAAGTTGTTTAATTTAATTATTTTGCTTGTGTATATAAATGCTTCGGTGTTAGACAATGAATTTCTCAACCACGTTAAATTTTG

mRNA sequence

ATGTATAACTTGTTTCACAGAATCATTCTACTTAGAGCTCCATCGTCAGTCTTTTCTCACGGATTTTCCGAATGTCCGTTGAAATCTCTCAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCGAAATCTGTTTCGTTGGCCTCTAATGTTGTTCAGCTCGAGAATAATGGGAAGGCTGTACGTGCGTTACTTGCGAATCATGGATTCTCTGAATCACAATTCTCTAACCTTGCCAAGAGGTATCCTCGAATTCTTTCTGCGAAGCCCGAGAAAACCCTACTGCCCAAACTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAAGTTGCCAAATTAGTATGTTCATGTCCTTATATTGTAAAAGTAAATTTAAACAAACGAATTATTCCAGCCTTTGATTACCTTCAAGCCATGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATAAAGCGCTTTGCGGGTATTCTCGCTTGGGATCTTCGAATTTCAGTTAGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGGGGCAGCCTAGACATTTCTTAACAAATTCCATCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAACTGCAGTTTGTTATTGCTGTTTCTGGTCTACGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGAAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAGAAGGCATCCGTGGTGTATGATGCTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGCGAATCATCTTTCGCTGCTAGTAGACCAATTGTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAATACGGGAATCCTGTTTCCTTCTTTGGGATTTCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCCCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATCAATGAATTCAATTTCTTGAAGATGAACAGGTTCAATCAGCATGAAAATTTAATTGTTTTGCTAAAGCTCATATCATTCACAAAGTTACCTTCCATGATCATGTGTATAGCATATTTTCTAAAAGTTGTTTAATTTAATTATTTTGCTTGTGTATATAAATGCTTCGGTGTTAGACAATGAATTTCTCAACCACGTTAAATTTTG

Coding sequence (CDS)

ATGTATAACTTGTTTCACAGAATCATTCTACTTAGAGCTCCATCGTCAGTCTTTTCTCACGGATTTTCCGAATGTCCGTTGAAATCTCTCAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCGAAATCTGTTTCGTTGGCCTCTAATGTTGTTCAGCTCGAGAATAATGGGAAGGCTGTACGTGCGTTACTTGCGAATCATGGATTCTCTGAATCACAATTCTCTAACCTTGCCAAGAGGTATCCTCGAATTCTTTCTGCGAAGCCCGAGAAAACCCTACTGCCCAAACTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAAGTTGCCAAATTAGTATGTTCATGTCCTTATATTGTAAAAGTAAATTTAAACAAACGAATTATTCCAGCCTTTGATTACCTTCAAGCCATGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATAAAGCGCTTTGCGGGTATTCTCGCTTGGGATCTTCGAATTTCAGTTAGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGGGGCAGCCTAGACATTTCTTAACAAATTCCATCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAACTGCAGTTTGTTATTGCTGTTTCTGGTCTACGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGAAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAGAAGGCATCCGTGGTGTATGATGCTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGCGAATCATCTTTCGCTGCTAGTAGACCAATTGTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAATACGGGAATCCTGTTTCCTTCTTTGGGATTTCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCCCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATCAATGAATTCAATTTCTTGA

Protein sequence

MYNLFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGKAVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCPYIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVPDSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSLKKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKSMNSIS

Homology

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BLAST of IVF0021820 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.6e-06
Identity = 60/293 (20.48%), Postives = 125/293 (42.66%), Query Frame = 0


Query: 58  NGKAVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVC 117
           N  ++     + GF +     + ++  ++  A+ +             G+   ++  +V 
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 118 SCPYIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQI 177
            CP I+ + L++R+IP  + L ++  +  +  +AI +F  IL+  +   + P +   + +
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 178 GVPDSNILKYLQGQPRHFLTNSIRFKET--VERVTEMGFNPQQLQFVIAVSGLRAMTKST 237
           GVP++ + K +   PR  ++ SI  K T  V  +  +G +   +   + V     M  S 
Sbjct: 125 GVPETQLGKMILFNPR-LISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSV 184

Query: 238 WDKKVEVYRKW-----GLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAA 297
            DK++    ++     GLSE+ I       P  +    +KI      ++ + G   S  A
Sbjct: 185 -DKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIA 244

Query: 298 SR----PIVLSLSLKKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIE 340
           +     P +L  S+K  + PR      ++ +G+ +    P  FF    K+ +E
Sbjct: 245 TMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYP-EFFHHGLKKKVE 294

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BLAST of IVF0021820 vs. ExPASy TrEMBL
Match: A0A5A7U7B5 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00650 PE=3 SV=1)

HSP 1 Score: 720.3 bits (1858), Expect = 4.0e-204
Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0


Query: 1   MYNLFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGK 60
           MYNLFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGK
Sbjct: 1   MYNLFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGK 60

Query: 61  AVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCP 120
           AVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCP
Sbjct: 61  AVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCP 120

Query: 121 YIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVP 180
           YIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVP
Sbjct: 121 YIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVP 180

Query: 181 DSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKV 240
           DSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSL 300
           EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSL
Sbjct: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKS 360
           KKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKS
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKS 360

Query: 361 MNSIS 366
           MNSIS
Sbjct: 361 MNSIS 365

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BLAST of IVF0021820 vs. ExPASy TrEMBL
Match: A0A1S4DSR4 (uncharacterized protein LOC103483819 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483819 PE=3 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 2.6e-158
Identity = 284/363 (78.24%), Postives = 320/363 (88.15%), Query Frame = 0


Query: 1   MYNLFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGK 60
           M NLF RI+LLR+PSSVFSHGFSECPLKSLR+LSTSSEIVSSPKS SLASNVVQ++NN K
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCP 120
           A  +   NHGFSESQ S++ K++P+ILSA PEK LLPKLLFF+SKGLSSPE+AK+V S P
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 YIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVP 180
           Y++  +LN RIIPAFDY+QA+LGSEEKTL  IK FAGIL  DLRISV PNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKV 240
           DSNI KYLQ +PR FLTN IRFKETV+RVTEMGFNPQQLQFV+AV  LR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSL 300
           EVYRKWGLSEEEICLAF+RHPWCMM+SEDKING MDFFVNK+GCESSF ASRP+++SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKS 360
           KKRI PRGYVYQVLL+KGLIKK+ +   F   SEK FIEKII+PHKEQIPGLLE Y+QK 
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 MNS 364
           M+S
Sbjct: 361 MDS 363

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BLAST of IVF0021820 vs. ExPASy TrEMBL
Match: A0A5A7U124 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00780 PE=3 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 7.4e-158
Identity = 291/364 (79.95%), Postives = 321/364 (88.19%), Query Frame = 0


Query: 1   MYNLFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGK 60
           M  LF RI+LLR+PSSVFSHGFSE PLKSLR+LSTSSEIVSSPKS SLASN VQLENN K
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCP 120
           AV  LLANHGFS+SQ S++ +R P+IL+A PEK LLPKLLFFQSKGLSSPE+AKLVC+ P
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 YIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVP 180
           Y++  +LNKRII  FDY+QA+LGSEEKTLAAIK+FAGILA DL+ISV PNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKV 240
           DSNILKYLQ QPR F+ +SIRFKE VERVTEMGFNPQ+LQF++AV  LRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSL 300
           EVYRKWGLSEEEICLAF+RHPWCMM+SEDKINGAMDFFVNK+GCESSF A RP ++SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHK-EQIPGLLELYKQK 360
           KKR+ PRGYVYQVLL KGLIKK  N   F   SEKRFIEK INPHK EQIPGLLELYKQK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 SMNS 364
            M+S
Sbjct: 361 LMDS 364

[Close]

BLAST of IVF0021820 vs. ExPASy TrEMBL
Match: A0A1S3AYM0 (uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=3 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 7.4e-158
Identity = 291/364 (79.95%), Postives = 321/364 (88.19%), Query Frame = 0


Query: 1   MYNLFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGK 60
           M  LF RI+LLR+PSSVFSHGFSE PLKSLR+LSTSSEIVSSPKS SLASN VQLENN K
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCP 120
           AV  LLANHGFS+SQ S++ +R P+IL+A PEK LLPKLLFFQSKGLSSPE+AKLVC+ P
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 YIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVP 180
           Y++  +LNKRII  FDY+QA+LGSEEKTLAAIK+FAGILA DL+ISV PNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKV 240
           DSNILKYLQ QPR F+ +SIRFKE VERVTEMGFNPQ+LQF++AV  LRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSL 300
           EVYRKWGLSEEEICLAF+RHPWCMM+SEDKINGAMDFFVNK+GCESSF A RP ++SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHK-EQIPGLLELYKQK 360
           KKR+ PRGYVYQVLL KGLIKK  N   F   SEKRFIEK INPHK EQIPGLLELYKQK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 SMNS 364
            M+S
Sbjct: 361 LMDS 364

[Close]

BLAST of IVF0021820 vs. ExPASy TrEMBL
Match: A0A5A7U0V4 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00670 PE=3 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 4.1e-156
Identity = 289/355 (81.41%), Postives = 312/355 (87.89%), Query Frame = 0


Query: 1   MYNLFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGK 60
           MYNLF R ILLR  SSVFSHGFSECPLKSLRYLSTSS+IVSSP S  LASN +Q +N  K
Sbjct: 1   MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQHKNKRK 60

Query: 61  AVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCP 120
           AV ALLA+HGFSESQ S+L KR+P+ILSA PEK+LLPKLLFFQSKGLSSPE+ KLVCS P
Sbjct: 61  AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFP 120

Query: 121 YIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVP 180
            ++  +L+KRIIPAFDY+QA+LGSEEKTLA+IK+FAGIL  DLRIS  PNIEILKQIGVP
Sbjct: 121 RVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVP 180

Query: 181 DSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKV 240
           DSNI KYLQ QPR FL N +RFKETVERVTEMGFNPQQLQFV+AV  LRAMTKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSL 300
           EVYRKWGLSEEEI LAFRRHPW MM SEDKINGAMDFFVNKMGCE+SFAA RPI+LSLSL
Sbjct: 241 EVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLEL 356
           KKRILPRGYVYQVLLSKGLIKK+ N + FF  SE  FIEK INPHKEQIPGLLEL
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLEL 355

[Close]

BLAST of IVF0021820 vs. NCBI nr
Match: KAA0049461.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16140.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 720 bits (1858), Expect = 1.34e-261
Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0


Query: 1   MYNLFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGK 60
           MYNLFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGK
Sbjct: 1   MYNLFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGK 60

Query: 61  AVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCP 120
           AVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCP
Sbjct: 61  AVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCP 120

Query: 121 YIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVP 180
           YIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVP
Sbjct: 121 YIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVP 180

Query: 181 DSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKV 240
           DSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSL 300
           EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSL
Sbjct: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKS 360
           KKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKS
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKS 360

Query: 361 MNSIS 365
           MNSIS
Sbjct: 361 MNSIS 365

[Close]

BLAST of IVF0021820 vs. NCBI nr
Match: XP_016899003.1 (PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo] >XP_016899004.1 PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo] >XP_016899005.1 PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo])

HSP 1 Score: 568 bits (1463), Expect = 2.01e-201
Identity = 284/363 (78.24%), Postives = 320/363 (88.15%), Query Frame = 0


Query: 1   MYNLFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGK 60
           M NLF RI+LLR+PSSVFSHGFSECPLKSLR+LSTSSEIVSSPKS SLASNVVQ++NN K
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCP 120
           A  +   NHGFSESQ S++ K++P+ILSA PEK LLPKLLFF+SKGLSSPE+AK+V S P
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 YIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVP 180
           Y++  +LN RIIPAFDY+QA+LGSEEKTL  IK FAGIL  DLRISV PNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKV 240
           DSNI KYLQ +PR FLTN IRFKETV+RVTEMGFNPQQLQFV+AV  LR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSL 300
           EVYRKWGLSEEEICLAF+RHPWCMM+SEDKING MDFFVNK+GCESSF ASRP+++SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKS 360
           KKRI PRGYVYQVLL+KGLIKK+ +   F   SEK FIEKII+PHKEQIPGLLE Y+QK 
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 MNS 363
           M+S
Sbjct: 361 MDS 363

[Close]

BLAST of IVF0021820 vs. NCBI nr
Match: XP_008439382.1 (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo] >KAA0049472.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16151.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 566 bits (1459), Expect = 8.47e-201
Identity = 290/361 (80.33%), Postives = 320/361 (88.64%), Query Frame = 0


Query: 4   LFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGKAVR 63
           LF RI+LLR+PSSVFSHGFSE PLKSLR+LSTSSEIVSSPKS SLASN VQLENN KAV 
Sbjct: 4   LFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVI 63

Query: 64  ALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCPYIV 123
            LLANHGFS+SQ S++ +R P+IL+A PEK LLPKLLFFQSKGLSSPE+AKLVC+ PY++
Sbjct: 64  ELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVL 123

Query: 124 KVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVPDSN 183
             +LNKRII  FDY+QA+LGSEEKTLAAIK+FAGILA DL+ISV PNIEILKQIGVPDSN
Sbjct: 124 TGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSN 183

Query: 184 ILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKVEVY 243
           ILKYLQ QPR F+ +SIRFKE VERVTEMGFNPQ+LQF++AV  LRAMTKSTWDKKVEVY
Sbjct: 184 ILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVY 243

Query: 244 RKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSLKKR 303
           RKWGLSEEEICLAF+RHPWCMM+SEDKINGAMDFFVNK+GCESSF A RP ++SLSLKKR
Sbjct: 244 RKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKR 303

Query: 304 ILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKE-QIPGLLELYKQKSMN 363
           + PRGYVYQVLL KGLIKK  N   F   SEKRFIEK INPHKE QIPGLLELYKQK M+
Sbjct: 304 LNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMD 363

[Close]

BLAST of IVF0021820 vs. NCBI nr
Match: XP_004134480.3 (transcription termination factor MTERF4, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 558 bits (1438), Expect = 1.28e-197
Identity = 288/359 (80.22%), Postives = 314/359 (87.47%), Query Frame = 0


Query: 5   FHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGKAVRA 64
           F  ++LLR+PSSVFSHGFSE PLKSL YLSTSSEIVSSP+S SLASN VQLENNGKAV A
Sbjct: 5   FRTLLLLRSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGKAVIA 64

Query: 65  LLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCPYIVK 124
           LLANHGFS+SQ S LA RYP+ILSA PEKTLLPKLLFFQSKGLSSPE+ +LV S P+++ 
Sbjct: 65  LLANHGFSQSQISYLANRYPQILSANPEKTLLPKLLFFQSKGLSSPEIFELVRSDPWVLG 124

Query: 125 VNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVPDSNI 184
            ++NKRIIPAFDY+QA+LGSEEKTLA IK+FAGIL+ DLRISV PNIEILKQIGVPDS+I
Sbjct: 125 ASINKRIIPAFDYIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDSSI 184

Query: 185 LKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKVEVYR 244
           LKY   QPR FLTNSIRFKETVERV EMGFNPQQ QFV+AV  LR+MTKSTWDKKVE+ R
Sbjct: 185 LKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEILR 244

Query: 245 KWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSLKKRI 304
           KWGLSEE+I LAFRR+PWCM +SEDKINGAMDFFVNKMGCESSFAA RP++LS SLKKRI
Sbjct: 245 KWGLSEEDIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKKRI 304

Query: 305 LPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKSMNS 363
           LPRGYVYQVLLSKGLIKK  N   FF   EKRFIEK INP KEQIP LLELYKQK M S
Sbjct: 305 LPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKLMES 363

[Close]

BLAST of IVF0021820 vs. NCBI nr
Match: XP_016898974.1 (PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo])

HSP 1 Score: 553 bits (1425), Expect = 1.22e-195
Identity = 284/359 (79.11%), Postives = 306/359 (85.24%), Query Frame = 0


Query: 1   MYNLFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGK 60
           M NLF RI+LLR+PSS FSHGFSECPLK LRYLSTSSEIVSSPKS SLASN VQL+NN K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  AVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCP 120
           A+ ALLANHGFSESQ S++ KR  +IL   PEK L PKLLFFQSKGLSSPE+ KLVCS P
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 YIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVP 180
            ++  +LNKRIIP FDYLQA+ GSEEKTL  IKRFAGILAWDLRISV PNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKV 240
           DSNI KYLQ QPR FL N +RFKE VERV EMGFNPQQLQFV+AV  LRAMTKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSL 300
           EVYRKWGLSEEEI +AFR+ P CM  SEDKING MDFFVNK+GCESSFAA RPI+LSLSL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQK 359
           KKRILPRGY+YQVLLSKGLIKK+ N   FF   EKRFIEK INPH EQI GLLELY++K
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEK 359

[Close]

BLAST of IVF0021820 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 229.9 bits (585), Expect = 3.2e-60
Identity = 131/331 (39.58%), Postives = 202/331 (61.03%), Query Frame = 0


Query: 29  SLRYLSTSSEIVSSPKSVSLASNVVQLEN--NGKAVRALLANHGFSESQFSNLAKRYPRI 88
           +L YL  S  +  SP S ++AS  + L++      V  LL +HGF+ +Q S+L K+ P +
Sbjct: 71  TLNYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 89  LSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCPYIVKVNLNKRIIPAFDYLQAMLGSEE 148
           L A  E  LLPKL FF S G+S   +A+ + S P I+  +L  ++IP++++L+++L S+E
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 149 KTLAAIKRFAGILAWDLRISVSPNIEILKQIGVPDSNILKYLQGQPRHFLTNSIRFKETV 208
           K +AA++R   +   D   ++ PNI  + + GVP+  I   L   P   +  +  F+   
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 209 ERVTEMGFNPQQLQFVIAVSGLRAM-TKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMM 268
           ++  EMGFNPQ+  FV+A+  L     KS WDK  EVY++WG SE++I  AF++HP CMM
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 269 LSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSLKKRILPRGYVYQVLLSKGLIKKYGN 328
           LSE KIN  M++FVN+M       A  P+VL  SL+KRI+PR  V +VL+S GL+K+  +
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 329 PVSFFGISEKRFIEKIINPHKEQIPGLLELY 357
             S     EK F+EK++  ++E++P L+ LY
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of IVF0021820 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 206.5 bits (524), Expect = 3.8e-53
Identity = 111/318 (34.91%), Postives = 194/318 (61.01%), Query Frame = 0


Query: 42  SPKSVSLASNVVQLENNGK--AVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKL 101
           S +S    S  V+L ++ K  +V AL  +HGF+  Q +++ K +PR+LS  PE  + PKL
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKL 128

Query: 102 LFFQSKGLSSPEVAKLVCSCPYIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGIL 161
           +FF S G S+ + AK++ S P ++  +L+KR+IP +D L+++L  EE  +  +KR  GI 
Sbjct: 129 MFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKR--GIR 188

Query: 162 AWDLRIS--VSPNIEILKQIGVPDSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQ 221
            + L+I+  VS  + I +++GVPD +I   +Q  P  F +   RF E + RV   GF+P+
Sbjct: 189 CFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPK 248

Query: 222 QLQFVIAVSGLRAMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDF 281
           +  FV A+      ++S  ++K ++++ +G S+E+   A  R P C+ +S++KI   +++
Sbjct: 249 KAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEY 308

Query: 282 FVNKMGCESSFAASRPIVLSLSLKKRILPRGYVYQVLLSKGLIKKYG-NPVSFFGISEKR 341
            VN +G ++    +RP+VLSLS++KRI PR  V  +LLSKGL+KK   N  +   +    
Sbjct: 309 LVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSE 368

Query: 342 FIEKIINPHKEQIPGLLE 355
           F++K +  +++++P L++
Sbjct: 369 FMDKFVLKYQDEMPQLVQ 384

[Close]

BLAST of IVF0021820 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-39
Identity = 102/324 (31.48%), Postives = 175/324 (54.01%), Query Frame = 0


Query: 43  PKSVSLASNVVQLEN--NGKAVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLL 102
           P ++++A     L++    ++V  +L ++ FS++Q     + +PR++    EK L PKL 
Sbjct: 53  PLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLR 112

Query: 103 FFQSKGLSSPEVAKLVCSCPYIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAG--I 162
           FF+  G +   + K V     +V V+L K++IP  + L++++  + + L  I    G  +
Sbjct: 113 FFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLL 172

Query: 163 LAWDLRISVSPNIEILKQIGVPDSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQ 222
           L+ D  + + PNI  L+  G+  S +   L+ QPR F  +  + +  V R  ++GF    
Sbjct: 173 LSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNS 232

Query: 223 LQFVIAVSGLRAMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFF 282
              V AV  L ++++ T+D+KV+++   G SE+EI    RR P  +  SEDK+    +F+
Sbjct: 233 RMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFY 292

Query: 283 VNKMGCESSFAASRPIVLSLSLKKRILPRGYVYQVLLSKGLI----KKYGNPVSFFGISE 342
           + +MG E    A RP VLS +L+KR++PR  V Q+L  KGL+    KK  N V    ++E
Sbjct: 293 LKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTE 352

Query: 343 KRFIEKIINPHKEQI-PGLLELYK 358
           + F+EK +    ++I   LL  YK
Sbjct: 353 EAFLEKYVVRFGDEIAEELLVAYK 376

[Close]

BLAST of IVF0021820 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 141.0 bits (354), Expect = 1.9e-33
Identity = 101/342 (29.53%), Postives = 169/342 (49.42%), Query Frame = 0


Query: 56  ENNGKAVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKL 115
           +NN  +V  LL +HGF+ SQ S + + YP++L A  EK+L PKL F QS+G SS E+ ++
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEI 140

Query: 116 VCSCPYIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILK 175
           V S P I+    +K I   +D+++  L   EK+    K    +   +L   +  N+ +L+
Sbjct: 141 VSSVPEILGKKGHKTISVYYDFIKDTL--LEKSSKNEKLCHSLPQGNLENKIR-NVSVLR 200

Query: 176 QIGVPDSNILKYL--QGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTK 235
           ++G+P   +   L    QP   +    +F+ET+++V EMGF+P   +FV A+  +  M +
Sbjct: 201 ELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNE 260

Query: 236 STWDKKVEVY--------------RKW---------------------GLSEEEICLAFR 295
            T ++KV +Y              +KW                     G S +E     +
Sbjct: 261 KTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVK 320

Query: 296 RHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSLKKRILPRGYVYQVLLSKG 355
             P C+ LS + +    +F V KM        S P V   SL+KRI+PRG V + L+SKG
Sbjct: 321 HFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKG 380

Query: 356 LIKKYGNPVSFFGISEKR-FIEKIINPH--KEQIPGLLELYK 358
           L++     +S   +  K+ F+ + +  H  K+ +  L+ +Y+
Sbjct: 381 LMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYR 416

[Close]

BLAST of IVF0021820 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 141.0 bits (354), Expect = 1.9e-33
Identity = 101/342 (29.53%), Postives = 169/342 (49.42%), Query Frame = 0


Query: 56  ENNGKAVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKL 115
           +NN  +V  LL +HGF+ SQ S + + YP++L A  EK+L PKL F QS+G SS E+ ++
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEI 140

Query: 116 VCSCPYIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILK 175
           V S P I+    +K I   +D+++  L   EK+    K    +   +L   +  N+ +L+
Sbjct: 141 VSSVPEILGKKGHKTISVYYDFIKDTL--LEKSSKNEKLCHSLPQGNLENKIR-NVSVLR 200

Query: 176 QIGVPDSNILKYL--QGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTK 235
           ++G+P   +   L    QP   +    +F+ET+++V EMGF+P   +FV A+  +  M +
Sbjct: 201 ELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNE 260

Query: 236 STWDKKVEVY--------------RKW---------------------GLSEEEICLAFR 295
            T ++KV +Y              +KW                     G S +E     +
Sbjct: 261 KTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVK 320

Query: 296 RHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSLKKRILPRGYVYQVLLSKG 355
             P C+ LS + +    +F V KM        S P V   SL+KRI+PRG V + L+SKG
Sbjct: 321 HFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKG 380

Query: 356 LIKKYGNPVSFFGISEKR-FIEKIINPH--KEQIPGLLELYK 358
           L++     +S   +  K+ F+ + +  H  K+ +  L+ +Y+
Sbjct: 381 LMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYR 416

The following BLAST results are available for this feature:

BLAST of IVF0021820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL6	2.6e-06	20.48	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of IVF0021820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U7B5	4.0e-204	100.00	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DSR4	2.6e-158	78.24	uncharacterized protein LOC103483819 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7U124	7.4e-158	79.95	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AYM0	7.4e-158	79.95	uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=...	[more]
A0A5A7U0V4	4.1e-156	81.41	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of IVF0021820 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049461.1	1.34e-261	100.00	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16140.1 tr...	[more]
XP_016899003.1	2.01e-201	78.24	PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo] >XP_01...	[more]
XP_008439382.1	8.47e-201	80.33	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo] >KAA0049472.1 tra...	[more]
XP_004134480.3	1.28e-197	80.22	transcription termination factor MTERF4, chloroplastic-like [Cucumis sativus]	[more]
XP_016898974.1	1.22e-195	79.11	PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo]	[more]

BLAST of IVF0021820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	3.2e-60	39.58	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	3.8e-53	34.91	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	1.1e-39	31.48	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	1.9e-33	29.53	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	1.9e-33	29.53	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 149..180 e-value: 430.0 score: 6.8 coord: 113..144 e-value: 0.34 score: 20.0 coord: 254..285 e-value: 0.33 score: 20.0 coord: 286..320 e-value: 95.0 score: 11.9 coord: 77..108 e-value: 0.0018 score: 27.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 65..223 e-value: 2.6E-19 score: 69.3 coord: 158..337 e-value: 2.4E-21 score: 76.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 38..361
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 125..350 e-value: 1.0E-46 score: 161.2
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 38..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0021820.1	IVF0021820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding